Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACCACAGCACAAAAACAGAGCCGGATTTTGCTTATCTTGGCCCAATTCGCCGCCACTTGTTAGGCGAATCGGAGGCCGCCGGTCCCGTTTTCAACCGGACTGGTAGTTTCAGTAGCTTAATTCCATGTCTTGACGACAACTGGGGCGATTTGCCACTCAAAGTGGATGACTCTGAAGATATGCTTCTCGCTGCTGTTCTCGGGGATGCCGTCGGTGCTGGATGGGTGCCGTCGCTTGGAAGTTGCGATTTTGGGTTCTCGGCGGTGAAGTCGGAGCCGGAGATGATTCCTGTGAGCTATCCACCGGTGCAACCCAATGTGGCGGTGAGGCCGGCGGTGGTACCGCAAAAGGGGAAGCATTATAGAGGAGTGAGGCAACGGCCATGGGGGAAGTTTGCAGCGGAGATTCGGGACCCGGCGAAAAATGGCGCTAGAGTTTGGCTTGGAACCTATGAGACGGCGGAGGATGCAGCTCTAGCTTATGATCGGGCAGCCTATCGAATGAGAGGCTCGAGGGCTCTACTCAATTTCCCCCTCCGTGTCAACTCCGGCGAGCCCGAACCGGTTCGAATCACGTCGAAGCGATCCTCGCCGGATCTTTCGTCTTCGCCAAAGCGGCGGAAGAAGGCCACCTCCGCCGCCGAAGATGGAGGAGTACGAGCGGCAAGCTTTACACGTGGAGGGCAGATGTTTGTCAGCCAATGCTAA
mRNA sequence
ATGTACCACAGCACAAAAACAGAGCCGGATTTTGCTTATCTTGGCCCAATTCGCCGCCACTTGTTAGGCGAATCGGAGGCCGCCGGTCCCGTTTTCAACCGGACTGGTAGTTTCAGTAGCTTAATTCCATGTCTTGACGACAACTGGGGCGATTTGCCACTCAAAGTGGATGACTCTGAAGATATGCTTCTCGCTGCTGTTCTCGGGGATGCCGTCGGTGCTGGATGGGTGCCGTCGCTTGGAAGTTGCGATTTTGGGTTCTCGGCGGTGAAGTCGGAGCCGGAGATGATTCCTGTGAGCTATCCACCGGTGCAACCCAATGTGGCGGTGAGGCCGGCGGTGGTACCGCAAAAGGGGAAGCATTATAGAGGAGTGAGGCAACGGCCATGGGGGAAGTTTGCAGCGGAGATTCGGGACCCGGCGAAAAATGGCGCTAGAGTTTGGCTTGGAACCTATGAGACGGCGGAGGATGCAGCTCTAGCTTATGATCGGGCAGCCTATCGAATGAGAGGCTCGAGGGCTCTACTCAATTTCCCCCTCCGTGTCAACTCCGGCGAGCCCGAACCGGTTCGAATCACGTCGAAGCGATCCTCGCCGGATCTTTCGTCTTCGCCAAAGCGGCGGAAGAAGGCCACCTCCGCCGCCGAAGATGGAGGAGTACGAGCGGCAAGCTTTACACGTGGAGGGCAGATGTTTGTCAGCCAATGCTAA
Coding sequence (CDS)
ATGTACCACAGCACAAAAACAGAGCCGGATTTTGCTTATCTTGGCCCAATTCGCCGCCACTTGTTAGGCGAATCGGAGGCCGCCGGTCCCGTTTTCAACCGGACTGGTAGTTTCAGTAGCTTAATTCCATGTCTTGACGACAACTGGGGCGATTTGCCACTCAAAGTGGATGACTCTGAAGATATGCTTCTCGCTGCTGTTCTCGGGGATGCCGTCGGTGCTGGATGGGTGCCGTCGCTTGGAAGTTGCGATTTTGGGTTCTCGGCGGTGAAGTCGGAGCCGGAGATGATTCCTGTGAGCTATCCACCGGTGCAACCCAATGTGGCGGTGAGGCCGGCGGTGGTACCGCAAAAGGGGAAGCATTATAGAGGAGTGAGGCAACGGCCATGGGGGAAGTTTGCAGCGGAGATTCGGGACCCGGCGAAAAATGGCGCTAGAGTTTGGCTTGGAACCTATGAGACGGCGGAGGATGCAGCTCTAGCTTATGATCGGGCAGCCTATCGAATGAGAGGCTCGAGGGCTCTACTCAATTTCCCCCTCCGTGTCAACTCCGGCGAGCCCGAACCGGTTCGAATCACGTCGAAGCGATCCTCGCCGGATCTTTCGTCTTCGCCAAAGCGGCGGAAGAAGGCCACCTCCGCCGCCGAAGATGGAGGAGTACGAGCGGCAAGCTTTACACGTGGAGGGCAGATGTTTGTCAGCCAATGCTAA
Protein sequence
MYHSTKTEPDFAYLGPIRRHLLGESEAAGPVFNRTGSFSSLIPCLDDNWGDLPLKVDDSEDMLLAAVLGDAVGAGWVPSLGSCDFGFSAVKSEPEMIPVSYPPVQPNVAVRPAVVPQKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPEPVRITSKRSSPDLSSSPKRRKKATSAAEDGGVRAASFTRGGQMFVSQC
Homology
BLAST of CmaCh02G015650 vs. ExPASy Swiss-Prot
Match:
O80337 (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana OX=3702 GN=ERF1A PE=1 SV=2)
HSP 1 Score: 243.0 bits (619), Expect = 3.3e-63
Identity = 138/249 (55.42%), Postives = 159/249 (63.86%), Query Frame = 0
Query: 1 MYHSTKTEPDFAYLGPIRRHLLGESE-------------------AAGPVFNRTGSFSSL 60
M + ++ D+A+L IRRHLLGESE + PV+ R SFS L
Sbjct: 1 MSMTADSQSDYAFLESIRRHLLGESEPILSESTASSVTQSCVTGQSIKPVYGRNPSFSKL 60
Query: 61 IPCLDDNWGDLPLKVDDSEDMLLAAVLGDAVGAGWVPSLGSCD---FGFSAVKSEP---- 120
PC ++WGDLPLK +DSEDML+ +L DA GW PS S D F +VK E
Sbjct: 61 YPCFTESWGDLPLKENDSEDMLVYGILNDAFHGGWEPSSSSSDEDRSSFPSVKIETPESF 120
Query: 121 ---EMIPVSYPPVQPNVAVRPAVVPQKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGT 180
+ +PV P V AV KGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGT
Sbjct: 121 AAVDSVPVKKEKTSP---VSAAVTAAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGT 180
Query: 181 YETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPEPVRITSKRSSPDLSSSPKRRKKA 221
+ETAEDAALAYDRAA+RMRGSRALLNFPLRVNSGEP+PVRI SKRSS S+ KK
Sbjct: 181 FETAEDAALAYDRAAFRMRGSRALLNFPLRVNSGEPDPVRIKSKRSSFSSSNENGAPKKR 240
BLAST of CmaCh02G015650 vs. ExPASy Swiss-Prot
Match:
Q9LW50 (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris OX=4096 GN=ERF2 PE=2 SV=1)
HSP 1 Score: 229.2 bits (583), Expect = 4.9e-59
Identity = 123/205 (60.00%), Postives = 147/205 (71.71%), Query Frame = 0
Query: 30 PVFNRTGSFSSLIPCLDDNWGDLPLKVDDSEDMLLAAVLGDAVGAGWVPSLGSCDFGFSA 89
PV++RT SFSSL+PCL D WGDLPLKVDDSEDM++ +L DA+ GW P + +
Sbjct: 10 PVYHRTSSFSSLMPCLTDTWGDLPLKVDDSEDMVIYGLLSDALTTGWTP----FNLTSTE 69
Query: 90 VKSEP--------EMIPVSYPPVQPNVAVRPAVVPQKGKHYRGVRQRPWGKFAAEIRDPA 149
+K+EP +P PP + A AVVP KG+HYRGVRQRPWGKFAAEIRDPA
Sbjct: 70 IKAEPREEIEPATSPVPSVAPPAETTTA--QAVVP-KGRHYRGVRQRPWGKFAAEIRDPA 129
Query: 150 KNGARVWLGTYETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPEPVRITSKRSSPDL 209
KNGARVWLGTYETAE+AALAYD+AAYRMRGS+ALLNFP R+ EPEPVR+T KR SP+
Sbjct: 130 KNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPHRIGLNEPEPVRLTVKRRSPEP 189
Query: 210 SSS----------PKRRKKATSAAE 217
+SS PKRR+KA +A +
Sbjct: 190 ASSSISPASENSLPKRRRKAVAAKQ 207
BLAST of CmaCh02G015650 vs. ExPASy Swiss-Prot
Match:
Q40479 (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum OX=4097 GN=ERF2 PE=2 SV=1)
HSP 1 Score: 221.1 bits (562), Expect = 1.3e-56
Identity = 130/224 (58.04%), Postives = 152/224 (67.86%), Query Frame = 0
Query: 37 SFSSLIPCLDDNWGDLPLKVDDSEDMLLAAVLGDAVGAGWVP-SLGSCDFGFSAVKS-EP 96
SFSSL+PCL D WGDLPLKVDDSEDM++ +L DA+ AGW P +L S + + EP
Sbjct: 13 SFSSLMPCLTDTWGDLPLKVDDSEDMVIYGLLSDALTAGWTPFNLTSTEIKAEPREEIEP 72
Query: 97 EMIPVS--YPPVQPNVAVRPAVVPQKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTY 156
IPV PP + A AVVP KG+HYRGVRQRPWGKFAAEIRDPAKNGARVWLGTY
Sbjct: 73 ATIPVPSVAPPAETTTA--QAVVP-KGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTY 132
Query: 157 ETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPEPVRITSKRSSPDLSS--------- 216
ETAE+AALAYD+AAYRMRGS+ALLNFP R+ EPEPVR+T+KR SP+ +S
Sbjct: 133 ETAEEAALAYDKAAYRMRGSKALLNFPHRIGLNEPEPVRLTAKRRSPEPASSSISSALEN 192
Query: 217 -SPKRRKKATSA------------AEDGGVRAASFTRGGQMFVS 235
SPKRR+KA +A A G + F G Q+ VS
Sbjct: 193 GSPKRRRKAVAAKKAELEVQSRSNAMQVGCQMEQFPVGEQLLVS 233
BLAST of CmaCh02G015650 vs. ExPASy Swiss-Prot
Match:
Q40476 (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum OX=4097 GN=ERF1 PE=2 SV=1)
HSP 1 Score: 217.2 bits (552), Expect = 1.9e-55
Identity = 117/203 (57.64%), Postives = 140/203 (68.97%), Query Frame = 0
Query: 30 PVFNRTGSFSSLIPCLDDNWGDLPLKVDDSEDMLLAAVLGDAVGAGWVPSLGSCDFGFSA 89
PV+ R SFS LIPCL + WGDLPLKVDDSEDM++ +L DA+ GW P F FSA
Sbjct: 19 PVYRRNSSFSRLIPCLTETWGDLPLKVDDSEDMVIYTLLKDALNVGWSP------FNFSA 78
Query: 90 --VKSEPEMIPVSYPPVQPNVAVRPAVVPQKGKHYRGVRQRPWGKFAAEIRDPAKNGARV 149
VKSE + P + A PA +G+HYRGVR+RPWGKFAAEIRDPAKNGARV
Sbjct: 79 GEVKSEQREEEIVVSPAETTAA--PAAELPRGRHYRGVRRRPWGKFAAEIRDPAKNGARV 138
Query: 150 WLGTYETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPEPVRITSKR------SSPDL 209
WLGTYET E+AA+AYD+AAYRMRGS+A LNFP R+ EPEPVR+T+KR +S
Sbjct: 139 WLGTYETDEEAAIAYDKAAYRMRGSKAHLNFPHRIGLNEPEPVRVTAKRRASPEPASSSE 198
Query: 210 SSSPKRRKKATSAAEDGGVRAAS 225
+SSPKRR+KA + + V S
Sbjct: 199 NSSPKRRRKAVATEKSEAVEVES 213
BLAST of CmaCh02G015650 vs. ExPASy Swiss-Prot
Match:
Q84XB3 (Ethylene-responsive transcription factor 1 OS=Solanum lycopersicum OX=4081 GN=ERF1 PE=2 SV=1)
HSP 1 Score: 214.2 bits (544), Expect = 1.6e-54
Identity = 116/199 (58.29%), Postives = 139/199 (69.85%), Query Frame = 0
Query: 30 PVFNRTGSFSSLIPCLDDNWGDLPLKVDDSEDMLLAAVLGDAVGAGWVPSLGSCDFGFSA 89
PV+ R+ SFSSL+PCL ++WGDLPLKV+DSEDM++ L DA GW PS +
Sbjct: 18 PVYCRSSSFSSLMPCLTESWGDLPLKVNDSEDMVIYGFLQDAFSIGWTPS----NLTSEE 77
Query: 90 VKSEP--EMIPVSYPPVQPNVAVRPAVVPQKGKHYRGVRQRPWGKFAAEIRDPAKNGARV 149
VK EP E+ P V P V PA + KG+HYRGVRQRPWGKFAAEIRDPAKNGARV
Sbjct: 78 VKLEPREEIEPAMSTSVSP-PTVAPAALQPKGRHYRGVRQRPWGKFAAEIRDPAKNGARV 137
Query: 150 WLGTYETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPEPVRITSKR----------S 209
WLGTYE+AE+AALAY +AA+RMRG++ALLNFP R+ EPEPVR+T KR S
Sbjct: 138 WLGTYESAEEAALAYGKAAFRMRGTKALLNFPHRIGLNEPEPVRVTVKRRLSESASSSVS 197
Query: 210 SPDLSSSPKRRKKATSAAE 217
S S SPKRR+K +A +
Sbjct: 198 SASESGSPKRRRKGVAAKQ 211
BLAST of CmaCh02G015650 vs. TAIR 10
Match:
AT4G17500.1 (ethylene responsive element binding factor 1 )
HSP 1 Score: 243.0 bits (619), Expect = 2.3e-64
Identity = 138/249 (55.42%), Postives = 159/249 (63.86%), Query Frame = 0
Query: 1 MYHSTKTEPDFAYLGPIRRHLLGESE-------------------AAGPVFNRTGSFSSL 60
M + ++ D+A+L IRRHLLGESE + PV+ R SFS L
Sbjct: 1 MSMTADSQSDYAFLESIRRHLLGESEPILSESTASSVTQSCVTGQSIKPVYGRNPSFSKL 60
Query: 61 IPCLDDNWGDLPLKVDDSEDMLLAAVLGDAVGAGWVPSLGSCD---FGFSAVKSEP---- 120
PC ++WGDLPLK +DSEDML+ +L DA GW PS S D F +VK E
Sbjct: 61 YPCFTESWGDLPLKENDSEDMLVYGILNDAFHGGWEPSSSSSDEDRSSFPSVKIETPESF 120
Query: 121 ---EMIPVSYPPVQPNVAVRPAVVPQKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGT 180
+ +PV P V AV KGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGT
Sbjct: 121 AAVDSVPVKKEKTSP---VSAAVTAAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGT 180
Query: 181 YETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPEPVRITSKRSSPDLSSSPKRRKKA 221
+ETAEDAALAYDRAA+RMRGSRALLNFPLRVNSGEP+PVRI SKRSS S+ KK
Sbjct: 181 FETAEDAALAYDRAAFRMRGSRALLNFPLRVNSGEPDPVRIKSKRSSFSSSNENGAPKKR 240
BLAST of CmaCh02G015650 vs. TAIR 10
Match:
AT5G47220.1 (ethylene responsive element binding factor 2 )
HSP 1 Score: 212.2 bits (539), Expect = 4.4e-55
Identity = 125/221 (56.56%), Postives = 144/221 (65.16%), Query Frame = 0
Query: 1 MYHSTKTEPDFAYLGPIRRHLLGESEAAGPVFNRTGSFSSLIPCLDDNWGDLPLKVDDSE 60
MY E D+A L I RHLLG N + S C ++WG LPLK +DSE
Sbjct: 1 MYGQCNIESDYALLESITRHLLGGGGENELRLNESTPSS----CFTESWGGLPLKENDSE 60
Query: 61 DMLLAAVLGDAVGAGWVPSLGSCDFGFSAVKSEPEMIPVSYPPVQPNVAVRPAVVPQKGK 120
DML+ +L DA S SC F F AVK EP + +P A+ K K
Sbjct: 61 DMLVYGLLKDAFHFDTSSSDLSCLFDFPAVKVEPTE-NFTAMEEKPKKAIPVTETAVKAK 120
Query: 121 HYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEDAALAYDRAAYRMRGSRALLNFPL 180
HYRGVRQRPWGKFAAEIRDPAKNGARVWLGT+ETAEDAALAYD AA+RMRGSRALLNFPL
Sbjct: 121 HYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFRMRGSRALLNFPL 180
Query: 181 RVNSGEPEPVRITSKRSSPDLSSSPKRRKKATSAAEDGGVR 222
RVNSGEP+PVRITSKRSS SSS +TS++E+G ++
Sbjct: 181 RVNSGEPDPVRITSKRSSSSSSSS----SSSTSSSENGKLK 212
BLAST of CmaCh02G015650 vs. TAIR 10
Match:
AT2G44840.1 (ethylene-responsive element binding factor 13 )
HSP 1 Score: 167.9 bits (424), Expect = 9.6e-42
Identity = 97/190 (51.05%), Postives = 119/190 (62.63%), Query Frame = 0
Query: 31 VFNRTGSFSSLIPCLDDNWGDLPLKVDDSEDMLLAAVLGDAVGAGWVPSLGSCDFGFSAV 90
++ R SFS++I L+DNW DLPL VDDS+DM + L DAV +GW PS+
Sbjct: 15 MYFRNPSFSNVI--LNDNWSDLPLSVDDSQDMAIYNTLRDAVSSGWTPSV---------- 74
Query: 91 KSEPEMIPVSYPPVQPNVAVRPAVVPQKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLG 150
P P A QKG YRGVR+RPWGKFAAEIRDP KNGARVWLG
Sbjct: 75 --PPVTSPAEENKPPATKASGSHAPRQKGMQYRGVRRRPWGKFAAEIRDPKKNGARVWLG 134
Query: 151 TYETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPEPVRITSKRSSPDLSSSPK--RR 210
TYET EDAA+AYDRAA+++RGS+A LNFP + S + EPVRI +R SP+ S S +
Sbjct: 135 TYETPEDAAVAYDRAAFQLRGSKAKLNFPHLIGSCKYEPVRIRPRRRSPEPSVSDQLTSE 190
Query: 211 KKATSAAEDG 219
+K S +DG
Sbjct: 195 QKRESHVDDG 190
BLAST of CmaCh02G015650 vs. TAIR 10
Match:
AT5G47230.1 (ethylene responsive element binding factor 5 )
HSP 1 Score: 112.5 bits (280), Expect = 4.8e-25
Identity = 55/91 (60.44%), Postives = 66/91 (72.53%), Query Frame = 0
Query: 110 VRPAVVPQKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEDAALAYDRAAYRM 169
V V ++ KHYRGVRQRPWGKFAAEIRDP K G+RVWLGT++TA +AA AYD AA+R+
Sbjct: 144 VTKPVSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRL 203
Query: 170 RGSRALLNFPLRVNSGEPEPVRITSKRSSPD 201
RGS+A+LNFPL V +P KR D
Sbjct: 204 RGSKAILNFPLEVGKWKPRADEGEKKRKRDD 234
BLAST of CmaCh02G015650 vs. TAIR 10
Match:
AT4G17490.1 (ethylene responsive element binding factor 6 )
HSP 1 Score: 111.3 bits (277), Expect = 1.1e-24
Identity = 49/76 (64.47%), Postives = 61/76 (80.26%), Query Frame = 0
Query: 112 PAVVPQKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEDAALAYDRAAYRMRG 171
P V ++ +HYRGVR RPWGKFAAEIRDP + G RVWLGT+ETA +AA AYD+ A+R+RG
Sbjct: 127 PVVAAEEKRHYRGVRMRPWGKFAAEIRDPTRRGTRVWLGTFETAIEAARAYDKEAFRLRG 186
Query: 172 SRALLNFPLRVNSGEP 188
S+A+LNFPL V+ P
Sbjct: 187 SKAILNFPLEVDKWNP 202
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
O80337 | 3.3e-63 | 55.42 | Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana OX=3702 GN=E... | [more] |
Q9LW50 | 4.9e-59 | 60.00 | Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris OX=4096 GN=ER... | [more] |
Q40479 | 1.3e-56 | 58.04 | Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum OX=4097 GN=ERF2 ... | [more] |
Q40476 | 1.9e-55 | 57.64 | Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum OX=4097 GN=ERF1 ... | [more] |
Q84XB3 | 1.6e-54 | 58.29 | Ethylene-responsive transcription factor 1 OS=Solanum lycopersicum OX=4081 GN=ER... | [more] |