CmaCh02G015330 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh02G015330
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionVAN3-binding protein
LocationCma_Chr02: 8721270 .. 8726761 (-)
RNA-Seq ExpressionCmaCh02G015330
SyntenyCmaCh02G015330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCAAATTGAAGAATCCCCTGCTTGCCCGAGTGTTAAGAAGCAGCCCCCCTCGATTCAGGACGAAGCTTTTGCATGGTGTTCTTAATTTAATATTTTTCTCCATTTCGATCTCCGTGAATTTCAATCTCTTTCTTTGTTTCTTTCTGATTGCTTTTGGCTGAACCCCGACCTGATTTTGTGGTGGTTCAGAGCACGAGGCTGTTGGAATGTGCAGCTGAATCTCTTCTTGTCTGGTTGTCTTTGGGTATATAAGGTGTTTGTGAAAATGCCGCTGAGATAATTGTTCTTGGAAGAGACATTTTTTTTGTTTTCCAAAACAGGGTTTTTGATTGTACTCTTGTGGGAAGGATTTTGGGGGAAAATGGAAAAGGATTACTGTTCAAGTTGGAAATATAGCTCAATTCTTGGGCTAAGGAATACGGAGGAAGACGAGGAGATGAAAATTGTGTCATCTTTGCCTTCAATTCCTCAGCCTCAAACTCCACAGGAACCCATGGAGTTCTTGGCCAGGTCTTGGAGTCTATCAGCTTCTGAGATTACAAAAGCTCTTGCTCAAAAGCAGAAGCAGCTTTACATTGAGAGGAGCCCCATCGCAATTCCCGAGGTCATTGAACCCCCACAACTTGTAAGTTGAAGATTATAGATATTTTTCAGCTCTGGATTTGTGTTTTGGCCAATATTTATTGACTGTTTGTTCTATTTGTTTTGTGCAGCCAGGAAAGATTATGAGTTCTGTCCATGCTTGGAGGATGGGATCATTGGGAAAATGGTTTCATTTTCACCACAAGGAGGGTGGTAATAGTGTTGACAAAAAGAAGGATAGAGCAAGAATTGAAAATGCTCGTGTTCATTCTGCTTTATCTGTGGCTGCACTTGCTGCAGCCTTGGCTGCTGTGGTAGCAGCAGAGAACTCTGGTGGCTCTGATTCAAGAATGGGCACGGCTTTAGCCTCAGCTACTGAGATTTTGGCATCTCATTGCATAGAGATGGCTGAATTTTCTGGCGCCGACCATGAGCGAGTCAGTTCGGTTATCCGATCCGCAGTTGATGTTCGGAGTCCAGGTGACCTGATGACTTTGACAGCTGCAGCTGCCACAGGTACTTGTTCTATCTTTCTGGCCTTTTAATGAAAGATTAAGATCATTTGTTTCATTTGAAGAAGCATTGATATGATTAACAAAATACAGCTTTGCGAGGAGAAGCCGCTTTCAGATCAAGATTACCGAAGGAAGGCCGAAAGATTGCTTCGGTTAGTCCCTACGATAGGATAATGGCTCAAAATCATTGGGCTACTGCGTTTAATAGCCATATGGAGGAGCAGGAGCTTCCATGTGTGGGTGAATTGCTGCAGTTTACACAAAAAGGTTCAGTTTTTTCCTTTAAAAAGTTCAATTTCCATTGCATTCTGATTCCCAGATCGTTGTGTTTAATCAAAAACTTCATATTGGGTTCAAAACATAACAAGTTTTGTTGAATGAACTGTTATATTTGATAACAGAACTTCCACAATAGACCACTGGTGGAGCTGCTCAAACTAAACCACTTCTTGTTGTGATAACAGGAACCCTGAGATGGAAGGAGGTCTCTGTCTACATCAACAAGAAATCTCAGGTAAATAATTTGACGTTTCACAAGAAACCAGACGACAATCAAAACTCGTTGTAATGAATATCAACCACGATTTCAGGTAATAGCATCGATTAAAAGCAAGCACGTCGGAGGGACCTTTTCGAAGAAAAACAAATGTATGCATCTAATATCATTGGTTTCTTCATCCTATTCGTCATGGACTTGTCCTAACAGCTTCATGTAACTGTGCTTCTGCTGTGTTCTAGGTGTTGTTTACGGACTTTGCGACGAAACGTCGTCATGGCCATATGAAAGAAAGAGAGATATCTTGAATGAGATCTACTTCGGCCTGAAAACTGCACAAGGTCTTATAGAGTTCAAGTGCAAGAACAAGGTCCATAAGCAGAGTTGGGTTCAAGGGATTCAAAGTCTTCTTCATCGAGTTAATTGCATTGAAACAACGAGGAGGTCTTTACAGATTTTGAGCTTCAGCGAGAGTATATAAAGCAGTTATGCATTTAGTATAAGCATATATAAATCAAAATGAATTATCAGTTGCCAAAGTTCTGTAAACTTGAGATGAAATTTACTGTCTGTGTGCATAAAATCTTGGTATTTGTAAGAGAATCATATAGATAACTCAAATTTTAAGTATTTTCTTATTCATAATAAACTTTTTTATATTTGTTCTAAAATATTTCCATACAAATGTGGGAATAGAAAATCAAATCAACAAGTAAATAGTTACACGGAAATTTACTTTCAATTCATAGTAAAAATGTAAAAATAGAAAAAAAGAAAAAAAGAAAAAAAGATAAAAAAATATATATTCTAACAAAAAAGGAAAAAAAAAGAATATAACATAAGATCTGTGAATATATATATTCTAAAAAAAGAAAGAAAAAAAAAAAGAATATATAGTTTTGTGGAATCAGAACTAAACTTTTAACTTTTAAAATTATAAGTATTTAATTTTTTTTAATCTACTTTTTGATTTAACAGAAAATAATAATAATAATAATGAAGACTCACATCGTAATTTAATATAAAACTGAAGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTGAAGTCTCTCCTTCTTGTCGTAAGAAATTTTAATTTTTAATAAGAAAAATACAAAACACATATGTAGAAAGACAACACTATTTCCCTCATTTACTAGAATCCCCGGCTTTCATCTTCTGCGGTCCTTTCGCTCTGTGTTCTACAAATGCCTGTAAGTTCCTCCAAGCTTAAGATCCAGATCTCGTACAACATCAATTCAATCTCAAGTTCTAGGGTTCTTTATTTTATAAATGTTTTGTTTTCTTATGCAATGGAATTTGTGAATTTCTGATTCGAGAAAGATGATTGCGTTCGTCGCAGTTCGGGACGTTCATTGAAGTGGAACCGCCCAGTCCACTCCGATACATAATTGGGGCCGTTATAATGATGATCGGAGTCGTATTCCCTCTCGGATACATGATGTTCCGGAATAAGCGTGGACCTTCTTCTTCTTCTTCTTACTCCAAACAGACGTAGGTGTGCCTATGAAGTTTACTTTGTTTTCGCTGTTCTTTCTTCACTCTCTAGTTTATTAGTTCTTTTCTCTTTATTTTACGCGTTATCTATTAAATTTAATCATTTCTATGACCTGATATTGATTGGAAATCATGGTCGTCCGGTTATTATTATTATGTTTATATGAAATTGGATTTGTTCTTTAATTGCCAATCTTGTTGACCTGATTAATGGACTTTCGGAGTTCGGTTTTACTGGAAGTAGTCGGAATTGGGTATAATTGATTGTTGAGCTTTTATTCTAGCGTTATTTATTAGGATTCTGAAGTCTGATGTACCTTACAAATTCCAAAATGAGGTTTTGGTGGAATTTTCGTTTAGAAGGTGAAGAGAATTTCTTGTTGTGCGCTGAATTATCTCTTAGGCCTGTTGTTGAGTAAATATTGATTATGTAGTTTTTACGAAAACCAAAAAGCTTAGCTGTAGGAGCTCCTTGATTTCATAGATGAATTTCCCTCTTTGATTCCTTTTCTTTGGACTTGTTGAAGTTTTTCTGAACATATGAGAAACCTGTAAAATGATCATGATCCTCAACGAGTTTTCTGGTTTGAGGTAGAGGGTGAGATTTCTTACTAAATTATGTTTTGGATGACCAGCATATTGAATGGGTACATGTTGGAAGTCTTGGTGGACGCGATTAGTCATTCGACTTGCAAATCTTTGGATTTCTTTTTAAACTAAAAAATAACTTGCTGAGAACATCATCTTCTCCCTTCCCTTCGATCTCCCAGTATCCTCATCTCTCCCTCTTTCCTTCACTGCATAATTTCATGTCTGCTGGTACCTCCACGATTAGTGTTGCCCTCGTGATGGAAAGGCAATGTCAAAAGAAAAAAGAAAAAAGAAAAAAGAAAAAGAAGAAGAAACAATTGATGGAGAGGCATAGTGTGGGTGGGATTTTCATCTTCCTTATAAGTGGTTGTGGAGAGTAGATAAGAACATCCAATTTGCAAAGTGTAGAATGGGTAATATATGTCAAGTGTCAACTGTACTTTTATGATAAATCTTGAAACAGAACTACTCGAAATTGAAACATGTATCGGGGCTGTCATAGGTTTAAGACTTATCTATATATCTATTTTTAGGGTGAAATGCACAATTTATTTGAGTATGCCCCCTGTACTTCTTGGTCTATTTCTTGTGAACTCCCTATTCTACTTCTGAGATATTAGTCCTAGCCATTTGTAGTTTCTGAGTCCAACTTCGTTGGACATTCTACGTACATGATACATATGTAACTAATTTAGGCACTTCATAGCTTATAGTTCTCTCTTTTCTTTATGGAGGAGCATCATCTTGGATTTTTGAGGGAAGAAGATTCTCCTGTGTGTTAGACGTAGGAAGATTATTCCATAGTTCTTCCAACTTCATGAACTAGGATATCATTCCTCTCTTATCCGTATCAATTGAGAGCTATCCATATAAAGGTCACATGGTTCGTATGCAAAACTTCCGGTAAGTTTAATGAAAGGACAAACGCTAGTTTAAAGACGGGCAGTGCAAGGGTTTGTGTGTATGTGTATACGAATCATAGAATACTTAGGAACAAGTTACTCGTCTTTGTTTTTTTTTTTTAAATCTTGGGGAGCGAAGTCTCCATCCAAGCACGAATATCTTTGTTTAAGAAAATATTTTTGATATAGAAAGTCTCAAATTCAGGATCTTCCGTCGTACATATTTCCTGAGAGAGGAAGTCATAGGCACGTAGGTTCAGGGCCAGACCAACAACTCTAAAAACACTCATCCATAAACGAGTACTAGTACAAAATAACATAAAGAAACGTAACCAAGCTTTATTGAAAAAAGCAACCCCAAAGATTTGAGACCAAAAGCGGCTAGTGGACCACTAACCAGGGGGAGAAATAGTAGGATTTTTAGGTGGATAGAGAGGTCTTTGGAGGGTGTGCAGGAGGTTGTGAGATTTCTTTTGCATCTTTATGAGCGTCCACTAATCAGTCTTTTTGTAATTATCAGCTTGGTATTATTTTTTTTGTTTTGTTTCTTTAATGAAAAATCCATTTCTTACCTCCCCTCCCCCCCCC

mRNA sequence

TTTCAAATTGAAGAATCCCCTGCTTGCCCGAGTGTTAAGAAGCAGCCCCCCTCGATTCAGGACGAAGCTTTTGCATGAGCACGAGGCTGTTGGAATGTGCAGCTGAATCTCTTCTTGTCTGGTTGTCTTTGGGTATATAAGGTGTTTGTGAAAATGCCGCTGAGATAATTGTTCTTGGAAGAGACATTTTTTTTGTTTTCCAAAACAGGGTTTTTGATTGTACTCTTGTGGGAAGGATTTTGGGGGAAAATGGAAAAGGATTACTGTTCAAGTTGGAAATATAGCTCAATTCTTGGGCTAAGGAATACGGAGGAAGACGAGGAGATGAAAATTGTGTCATCTTTGCCTTCAATTCCTCAGCCTCAAACTCCACAGGAACCCATGGAGTTCTTGGCCAGGTCTTGGAGTCTATCAGCTTCTGAGATTACAAAAGCTCTTGCTCAAAAGCAGAAGCAGCTTTACATTGAGAGGAGCCCCATCGCAATTCCCGAGGTCATTGAACCCCCACAACTTCCAGGAAAGATTATGAGTTCTGTCCATGCTTGGAGGATGGGATCATTGGGAAAATGGTTTCATTTTCACCACAAGGAGGGTGGTAATAGTGTTGACAAAAAGAAGGATAGAGCAAGAATTGAAAATGCTCGTGTTCATTCTGCTTTATCTGTGGCTGCACTTGCTGCAGCCTTGGCTGCTGTGGTAGCAGCAGAGAACTCTGGTGGCTCTGATTCAAGAATGGGCACGGCTTTAGCCTCAGCTACTGAGATTTTGGCATCTCATTGCATAGAGATGGCTGAATTTTCTGGCGCCGACCATGAGCGAGTCAGTTCGGTTATCCGATCCGCAGTTGATGTTCGGAGTCCAGGTGACCTGATGACTTTGACAGCTGCAGCTGCCACAGCTTTGCGAGGAGAAGCCGCTTTCAGATCAAGATTACCGAAGGAAGGCCGAAAGATTGCTTCGGTTAGTCCCTACGATAGGATAATGGCTCAAAATCATTGGGCTACTGCGTTTAATAGCCATATGGAGGAGCAGGAGCTTCCATGTGTGGGTGAATTGCTGCAGTTTACACAAAAAGGAACCCTGAGATGGAAGGAGGTCTCTGTCTACATCAACAAGAAATCTCAGGTAATAGCATCGATTAAAAGCAAGCACGTCGGAGGGACCTTTTCGAAGAAAAACAAATGTGTTGTTTACGGACTTTGCGACGAAACGTCGTCATGGCCATATGAAAGAAAGAGAGATATCTTGAATGAGATCTACTTCGGCCTGAAAACTGCACAAGGTCTTATAGAGTTCAAGTGCAAGAACAAGTTCGGGACGTTCATTGAAGTGGAACCGCCCAGTCCACTCCGATACATAATTGGGGCCGTTATAATGATGATCGGAGTCGTATTCCCTCTCGGATACATGATGTTCCGGAATAAGCGTGGACCTTCTTCTTCTTCTTCTTACTCCAAACAGACGTAGGTGTGCCTATGAAGTTTACTTTGTTTTCGCTGTTCTTTCTTCACTCTCTAGTTTATTAGTTCTTTTCTCTTTATTTTACGCGTTATCTATTAAATTTAATCATTTCTATGACCTGATATTGATTGGAAATCATGGTCGTCCGGTTATTATTATTATGTTTATATGAAATTGGATTTGTTCTTTAATTGCCAATCTTGTTGACCTGATTAATGGACTTTCGGAGTTCGGTTTTACTGGAAGTAGTCGGAATTGGGTATAATTGATTGTTGAGCTTTTATTCTAGCGTTATTTATTAGGATTCTGAAGTCTGATGTACCTTACAAATTCCAAAATGAGGTTTTGGTGGAATTTTCGTTTAGAAGGTGAAGAGAATTTCTTGTTGTGCGCTGAATTATCTCTTAGGCCTGTTGTTGAGTAAATATTGATTATGTAGTTTTTACGAAAACCAAAAAGCTTAGCTGTAGGAGCTCCTTGATTTCATAGATGAATTTCCCTCTTTGATTCCTTTTCTTTGGACTTGTTGAAGTTTTTCTGAACATATGAGAAACCTGTAAAATGATCATGATCCTCAACGAGTTTTCTGGTTTGAGGTAGAGGGTGAGATTTCTTACTAAATTATGTTTTGGATGACCAGCATATTGAATGGGTACATGTTGGAAGTCTTGGTGGACGCGATTAGTCATTCGACTTGCAAATCTTTGGATTTCTTTTTAAACTAAAAAATAACTTGCTGAGAACATCATCTTCTCCCTTCCCTTCGATCTCCCAGTATCCTCATCTCTCCCTCTTTCCTTCACTGCATAATTTCATGTCTGCTGGTACCTCCACGATTAGTGTTGCCCTCGTGATGGAAAGGCAATGTCAAAAGAAAAAAGAAAAAAGAAAAAAGAAAAAGAAGAAGAAACAATTGATGGAGAGGCATAGTGTGGGTGGGATTTTCATCTTCCTTATAAGTGGTTGTGGAGAGTAGATAAGAACATCCAATTTGCAAAGTGTAGAATGGGTAATATATGTCAAGTGTCAACTGTACTTTTATGATAAATCTTGAAACAGAACTACTCGAAATTGAAACATGTATCGGGGCTGTCATAGGTTTAAGACTTATCTATATATCTATTTTTAGGGTGAAATGCACAATTTATTTGAGTATGCCCCCTGTACTTCTTGGTCTATTTCTTGTGAACTCCCTATTCTACTTCTGAGATATTAGTCCTAGCCATTTGTAGTTTCTGAGTCCAACTTCGTTGGACATTCTACGTACATGATACATATGTAACTAATTTAGGCACTTCATAGCTTATAGTTCTCTCTTTTCTTTATGGAGGAGCATCATCTTGGATTTTTGAGGGAAGAAGATTCTCCTGTGTGTTAGACGTAGGAAGATTATTCCATAGTTCTTCCAACTTCATGAACTAGGATATCATTCCTCTCTTATCCGTATCAATTGAGAGCTATCCATATAAAGGTCACATGGTTCGTATGCAAAACTTCCGGTAAGTTTAATGAAAGGACAAACGCTAGTTTAAAGACGGGCAGTGCAAGGGTTTGTGTGTATGTGTATACGAATCATAGAATACTTAGGAACAAGTTACTCGTCTTTGTTTTTTTTTTTTAAATCTTGGGGAGCGAAGTCTCCATCCAAGCACGAATATCTTTGTTTAAGAAAATATTTTTGATATAGAAAGTCTCAAATTCAGGATCTTCCGTCGTACATATTTCCTGAGAGAGGAAGTCATAGGCACGTAGGTTCAGGGCCAGACCAACAACTCTAAAAACACTCATCCATAAACGAGTACTAGTACAAAATAACATAAAGAAACGTAACCAAGCTTTATTGAAAAAAGCAACCCCAAAGATTTGAGACCAAAAGCGGCTAGTGGACCACTAACCAGGGGGAGAAATAGTAGGATTTTTAGGTGGATAGAGAGGTCTTTGGAGGGTGTGCAGGAGGTTGTGAGATTTCTTTTGCATCTTTATGAGCGTCCACTAATCAGTCTTTTTGTAATTATCAGCTTGGTATTATTTTTTTTGTTTTGTTTCTTTAATGAAAAATCCATTTCTTACCTCCCCTCCCCCCCCC

Coding sequence (CDS)

ATGGAAAAGGATTACTGTTCAAGTTGGAAATATAGCTCAATTCTTGGGCTAAGGAATACGGAGGAAGACGAGGAGATGAAAATTGTGTCATCTTTGCCTTCAATTCCTCAGCCTCAAACTCCACAGGAACCCATGGAGTTCTTGGCCAGGTCTTGGAGTCTATCAGCTTCTGAGATTACAAAAGCTCTTGCTCAAAAGCAGAAGCAGCTTTACATTGAGAGGAGCCCCATCGCAATTCCCGAGGTCATTGAACCCCCACAACTTCCAGGAAAGATTATGAGTTCTGTCCATGCTTGGAGGATGGGATCATTGGGAAAATGGTTTCATTTTCACCACAAGGAGGGTGGTAATAGTGTTGACAAAAAGAAGGATAGAGCAAGAATTGAAAATGCTCGTGTTCATTCTGCTTTATCTGTGGCTGCACTTGCTGCAGCCTTGGCTGCTGTGGTAGCAGCAGAGAACTCTGGTGGCTCTGATTCAAGAATGGGCACGGCTTTAGCCTCAGCTACTGAGATTTTGGCATCTCATTGCATAGAGATGGCTGAATTTTCTGGCGCCGACCATGAGCGAGTCAGTTCGGTTATCCGATCCGCAGTTGATGTTCGGAGTCCAGGTGACCTGATGACTTTGACAGCTGCAGCTGCCACAGCTTTGCGAGGAGAAGCCGCTTTCAGATCAAGATTACCGAAGGAAGGCCGAAAGATTGCTTCGGTTAGTCCCTACGATAGGATAATGGCTCAAAATCATTGGGCTACTGCGTTTAATAGCCATATGGAGGAGCAGGAGCTTCCATGTGTGGGTGAATTGCTGCAGTTTACACAAAAAGGAACCCTGAGATGGAAGGAGGTCTCTGTCTACATCAACAAGAAATCTCAGGTAATAGCATCGATTAAAAGCAAGCACGTCGGAGGGACCTTTTCGAAGAAAAACAAATGTGTTGTTTACGGACTTTGCGACGAAACGTCGTCATGGCCATATGAAAGAAAGAGAGATATCTTGAATGAGATCTACTTCGGCCTGAAAACTGCACAAGGTCTTATAGAGTTCAAGTGCAAGAACAAGTTCGGGACGTTCATTGAAGTGGAACCGCCCAGTCCACTCCGATACATAATTGGGGCCGTTATAATGATGATCGGAGTCGTATTCCCTCTCGGATACATGATGTTCCGGAATAAGCGTGGACCTTCTTCTTCTTCTTCTTACTCCAAACAGACGTAG

Protein sequence

MEKDYCSSWKYSSILGLRNTEEDEEMKIVSSLPSIPQPQTPQEPMEFLARSWSLSASEITKALAQKQKQLYIERSPIAIPEVIEPPQLPGKIMSSVHAWRMGSLGKWFHFHHKEGGNSVDKKKDRARIENARVHSALSVAALAAALAAVVAAENSGGSDSRMGTALASATEILASHCIEMAEFSGADHERVSSVIRSAVDVRSPGDLMTLTAAAATALRGEAAFRSRLPKEGRKIASVSPYDRIMAQNHWATAFNSHMEEQELPCVGELLQFTQKGTLRWKEVSVYINKKSQVIASIKSKHVGGTFSKKNKCVVYGLCDETSSWPYERKRDILNEIYFGLKTAQGLIEFKCKNKFGTFIEVEPPSPLRYIIGAVIMMIGVVFPLGYMMFRNKRGPSSSSSYSKQT
Homology
BLAST of CmaCh02G015330 vs. ExPASy Swiss-Prot
Match: Q8W4K5 (VAN3-binding protein OS=Arabidopsis thaliana OX=3702 GN=VAB PE=1 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.3e-40
Identity = 112/263 (42.59%), Postives = 160/263 (60.84%), Query Frame = 0

Query: 120 DKKKDRARIENARVHSALSVAALAAALAAVVA--AENSGGSD---SRMGTALASATEILA 179
           +KKK+  R +NA+VH+A+SVAA+A+A+AAV A  A +S G +   +R+  A+ASA  ++A
Sbjct: 207 EKKKEETRTQNAQVHAAVSVAAVASAVAAVAAATAASSPGKNEQMARIDMAMASAAALVA 266

Query: 180 SHCIEMAEFSGADHERVSSVIRSAVDVRSPGDLMTLTAAAATALRGEAAFRSRLPKEGRK 239
           + C+E AE  GAD + ++SV+ SAV+V+S  D++TLTAAAATALRG A  ++R  KE   
Sbjct: 267 AQCVEAAEIMGADRDHLTSVVSSAVNVKSHDDIVTLTAAAATALRGAATLKARALKEVWN 326

Query: 240 IASVSPYDRIMAQNHWATAFNSHMEEQ---ELPCVG----------------ELLQFTQK 299
           IA+V P ++  +          H +     ELP  G                ELL+ T+ 
Sbjct: 327 IAAVLPAEKGASSALCGQVDTKHSDSSFSGELPVAGEDFLGVCNQELLAKGTELLKRTRG 386

Query: 300 GTLRWKEVSVYINKKSQVIASIKSKHVGGTFSKKNKCVVYGLCDETSSWPYERKRDILN- 355
           G L WK VSVYINK  Q +  +KSKHVGGTF+KK K +V  +  +  +W     RD+ N 
Sbjct: 387 GELHWKIVSVYINKAGQAVLKMKSKHVGGTFTKKKKHMVLEVRKDIPAW---AGRDLFNG 446


HSP 2 Score: 40.4 bits (93), Expect = 5.6e-02
Identity = 19/42 (45.24%), Postives = 29/42 (69.05%), Query Frame = 0

Query: 38 PQTPQEPMEFLARSWSLSASEITKALAQKQKQLYIERSPIAI 80
          P++P+ PMEFL+RSWS+SA E+++AL   +      R P +I
Sbjct: 30 PESPRGPMEFLSRSWSVSALEVSRALHTAKSASATNRPPSSI 71

BLAST of CmaCh02G015330 vs. TAIR 10
Match: AT4G17350.1 (Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region )

HSP 1 Score: 389.0 bits (998), Expect = 4.5e-108
Identity = 211/370 (57.03%), Postives = 264/370 (71.35%), Query Frame = 0

Query: 1   MEKDYCSSWK---YSSILGLRNTEEDEE---MKIVSSLPSIPQPQTPQEPMEFLARSWSL 60
           ME  + S WK    SS  G  N EE+ E   ++      SIPQPQTP+EPMEFL+RSWSL
Sbjct: 1   MESGFYSDWKDTSSSSFFGSENMEEELEDGVLRAEELFSSIPQPQTPKEPMEFLSRSWSL 60

Query: 61  SASEITKALA----QKQKQLYIERS--PIAIPEVIEPPQLPGKIMSSVHAWRMGSLGKWF 120
           S SEI+KALA    Q+Q Q  + ++  P+  P+    P + GKIM+SV   R G+L KWF
Sbjct: 61  STSEISKALALKHRQQQDQFCVGQNSPPVLFPDAAADPLVAGKIMNSVGTRRAGTLSKWF 120

Query: 121 HFHHKEGGNSVD----KKKDRARIENARVHSALSVAALAAALAAVVAAENSGGSDSRMGT 180
           H H+KE   S      KKKD+ R+ENA VHSA+S+AALAA LA+V +A N  GS S+M  
Sbjct: 121 H-HNKEHSTSSTTTNLKKKDKVRVENAHVHSAVSIAALAAGLASVTSASNCKGSGSKMAL 180

Query: 181 ALASATEILASHCIEMAEFSGADHERVSSVIRSAVDVRSPGDLMTLTAAAATALRGEAAF 240
           ALASATE+LASHC+EMAE +GADH RV+S +RS+VD+ SPGDLMTLTAAAATALRGEAA 
Sbjct: 181 ALASATELLASHCVEMAERAGADHARVTSTVRSSVDIHSPGDLMTLTAAAATALRGEAAL 240

Query: 241 RSRLPKEGRKIASVSPYDRIMAQNHWATAFNSHMEEQELPCVGELLQFTQKGTLRWKEVS 300
           ++R PKE RK A+++P++R  + +HW   F   +EE  LP  GEL+Q  + G  R K V 
Sbjct: 241 KARQPKEARKNAAITPFERSFSDSHWHANFQYRLEEPNLPFEGELMQCARNGVQRTKRVC 300

Query: 301 VYINKKSQVIASIKSKHVGGTFSKKNKCVVYGLCDETSSWPYERKRDILNEIYFGLKTAQ 355
           VYINKKSQV+  +KSKHVGG FSKK KCVVYG+CDE S+WPY ++R+   E+YFGLKT Q
Sbjct: 301 VYINKKSQVMIKLKSKHVGGAFSKKIKCVVYGVCDEKSAWPYRKERENSEEVYFGLKTGQ 360

BLAST of CmaCh02G015330 vs. TAIR 10
Match: AT5G47440.1 (Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region )

HSP 1 Score: 345.1 bits (884), Expect = 7.5e-95
Identity = 202/371 (54.45%), Postives = 253/371 (68.19%), Query Frame = 0

Query: 1   MEKDYCSSW--KYSSILGLRNTEEDEEMKIVSS---LPSIPQPQTPQEPMEFLARSWSLS 60
           ME  + S W    SS+ G  N E + E   V S   +  IPQPQTP+EPM+FL+RSWSLS
Sbjct: 1   MEGGFYSDWNDSSSSLFGSENPEHELEEGNVRSEEIVSQIPQPQTPREPMKFLSRSWSLS 60

Query: 61  ASEITKALAQKQKQ-----LYIERSPIA-IPEVIEPPQLPGKIMSSVHAWRMGSLGKWFH 120
           ASEI+KALAQKQ+Q        + SP     +V   P +   IM+S    R G L KW  
Sbjct: 61  ASEISKALAQKQRQQRDLFSVSQNSPRGFFQDVAADPLMAENIMNSAGTRRSGRLSKW-- 120

Query: 121 FHHKEGGN----SVDKKKDRARIENARVHSALSVAALAAALAAVVAAEN-SGGSDSRMGT 180
           FHHK+  N     + +KKD+AR++ A VHSA+S+AALAA LA+V + E+ S  S S M  
Sbjct: 121 FHHKQHTNPSTMRIPRKKDKARVQKAHVHSAVSIAALAAGLASVTSEESCSKESCSMMAL 180

Query: 181 ALASATEILASHCIEMAEFSGADHERVSSVIRSAVDVRSPGDLMTLTAAAATALRGEAAF 240
           ALASATE+LASHCI+MAE +GADH  V+S +RS+VD+ SPGDLMTLTAAAATALRGEAA 
Sbjct: 181 ALASATELLASHCIDMAEQAGADHTCVASTVRSSVDIHSPGDLMTLTAAAATALRGEAAL 240

Query: 241 RSRLPKEGRKIASVSPYDRIMAQNHW-ATAFNSHMEEQELPCVGELLQFTQKGTLRWKEV 300
           + R PKE RK A+++P +R  + +HW        +EE  LP  GEL+Q  + G  R K V
Sbjct: 241 KVRQPKESRKNATITPCERSFSDSHWPGENCQFRLEEPNLPLEGELVQCARNGLQRNKRV 300

Query: 301 SVYINKKSQVIASIKSKHVGGTFSKKNKCVVYGLCDETSSWPYERKRDILNEIYFGLKTA 355
            VYINKKSQV+  +KSKHVGG FSKK KCVVYG+CDE S+WP  ++R+   E+YFGLKT 
Sbjct: 301 CVYINKKSQVMIKLKSKHVGGAFSKKIKCVVYGVCDEISAWPCRKERENSEEVYFGLKTG 360

BLAST of CmaCh02G015330 vs. TAIR 10
Match: AT4G16670.1 (Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region )

HSP 1 Score: 305.4 bits (781), Expect = 6.6e-83
Identity = 181/372 (48.66%), Postives = 242/372 (65.05%), Query Frame = 0

Query: 21  EEDEEMKIVSSLPS----------------IPQPQTPQEPMEFLARSWSLSASEITKALA 80
           E+DEE   +SS+P                  P+P+TP+EPMEFL RSWSLS SEI+ AL+
Sbjct: 25  EDDEESMTLSSVPENETSECSSPPATYPPIPPRPKTPREPMEFLCRSWSLSTSEISLALS 84

Query: 81  QKQKQLYIERSP--------IAIPEVIEPPQL-PGKIMSSVHAWRMGSLGKWFHFHHKEG 140
            ++    + ++P         ++  V  PP L  GK+ S+VHA R G++GKWFH     G
Sbjct: 85  SQKSDKQLNKNPNISQLADVTSLAPVAPPPPLQTGKLASAVHARRTGTIGKWFHHREFVG 144

Query: 141 GN-SVDKKKDRARIENARVHSALSVAALAAALAAVVAAENSGG-SDSRMGTALASATEIL 200
           G  S  KK+DR R+E A +HSA+S+A+LA A+AAV A+ N  G + S+M +ALASA+E+L
Sbjct: 145 GKVSAVKKRDRVRVEKAHLHSAVSIASLATAIAAVTASGNQDGFAGSKMSSALASASELL 204

Query: 201 ASHCIEMAEFSGADHERVSSVIRSAVDVRSPGDLMTLTAAAATALRGEAAFRSRLPKEGR 260
           ASHC+E+AE +GADH+RV S +RSAVDVR PGDL+TLTAAAATALRGEAA R RLPKE +
Sbjct: 205 ASHCLELAELAGADHDRVVSAVRSAVDVRGPGDLLTLTAAAATALRGEAALRVRLPKEAK 264

Query: 261 KIASVSPYDRIMAQNH-WATAFNSHMEEQEL-------PCVGELLQFTQKGTLRWKEVSV 320
             A++SP +R++ + H  ++  +      EL          GEL+Q T+ G LRWK V V
Sbjct: 265 NSAAISPCERVLPETHSCSSELDRTSTTDELISAKGVEESTGELMQCTRNGVLRWKHVKV 324

Query: 321 YINKKSQVIASIKSKHVGGTFSKKNKCVVYGLCDETSSWPYERKRDILN---EIYFGLKT 355
           YINKKSQVI  IKSKHV G FS K+K +V  +C+  S    +  +D  N   E+YFG+ T
Sbjct: 325 YINKKSQVIVEIKSKHVVGAFSMKSKGIVNDVCETVSG--LQNGKDTENTEEELYFGIGT 384

BLAST of CmaCh02G015330 vs. TAIR 10
Match: AT3G22810.1 (Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region )

HSP 1 Score: 187.6 bits (475), Expect = 2.0e-47
Identity = 144/429 (33.57%), Postives = 216/429 (50.35%), Query Frame = 0

Query: 38  PQTPQEPMEFLARSWSLSASEITKALAQKQKQL---YIERSPIAIPEVIE---------- 97
           P+TP EPMEFL+RSWS+SA E++KAL   Q+ L    IE + + + E I           
Sbjct: 18  PETPLEPMEFLSRSWSVSAHEVSKALTPSQQLLSKASIENTTVILEEPIAAGETETEDNS 77

Query: 98  -----------------------------PPQLPGKIMSS-------------VHAWRMG 157
                                         P+  G++  S             +   ++ 
Sbjct: 78  FVSGNPFSFACSETSQMVMDRILSQSQEVSPRTSGRLSHSSGPLNGSLTDSPPISPHQVD 137

Query: 158 SLGKW------FHFHHKEGGNSV---------------------DKKKDRARIENARVHS 217
            + ++      F+  ++  G +                      +KKK+  R  NA++H+
Sbjct: 138 DIKQFCRSNNNFNSQYRSTGTTPGPITATTTQSKTVGRWLKDRREKKKEEMRAHNAQIHA 197

Query: 218 ALSVAALAAALAAV---VAAENSGGSDSRMG---TALASATEILASHCIEMAEFSGADHE 277
           A+SVA +AAA+AA+    AA +S G D  M     A+ASA  ++A+ C+E AE  GA+ +
Sbjct: 198 AVSVAGVAAAVAAIAAATAASSSAGKDENMAKTDMAVASAATLVAAQCVEAAEVMGAERD 257

Query: 278 RVSSVIRSAVDVRSPGDLMTLTAAAATALRGEAAFRSRLPKEGRKIASVSPYDR------ 337
            ++SV+ SAV+VRS GD+MTLTA AATALRG A  ++R  KE   IASV P D+      
Sbjct: 258 HLASVVSSAVNVRSAGDIMTLTAGAATALRGVATLKARAMKEVWHIASVIPMDKGINLGG 317

Query: 338 ---IMAQNHWATAFNSHMEE-------------QELPCVGELLQFTQKGTLRWKEVSVYI 355
              +     + ++ +SH  E             + L   G+LL+ T+KG L WK VSVYI
Sbjct: 318 CSNVNGNGSYVSSSSSHSGEFLVEDNFLGHCNREWLARGGQLLKRTRKGDLHWKIVSVYI 377

BLAST of CmaCh02G015330 vs. TAIR 10
Match: AT5G43870.1 (Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region )

HSP 1 Score: 177.6 bits (449), Expect = 2.1e-44
Identity = 142/425 (33.41%), Postives = 210/425 (49.41%), Query Frame = 0

Query: 31  SLPSIPQPQTPQEPMEFLARSWSLSASEITKAL--------------------------- 90
           S P+   P+TP + MEFL+R+WS SA+E+++A+                           
Sbjct: 15  SNPTFKPPETPLDSMEFLSRTWSASATEVSRAVVASPPTSQPPQMRFSEIQNGSSDVTLV 74

Query: 91  -----------------AQKQKQLYIERSPIAIPEVI---------------EPPQLPGK 150
                            + +   + +ER     PE+                 PP  P  
Sbjct: 75  PEDEENGIVLGNTFSFASSETSLMVMERIMAQSPEISSPRTSGRLSHSSFTDSPPISPSD 134

Query: 151 IMSSVHAWRMG---------------------SLGKWFHFHHKEGGNSVDKKKDRARIEN 210
           I      +R+                      ++G+W         +  +KK++  R +N
Sbjct: 135 IDDFKQFYRVSPSFNGHIRGSSAIPGTAGGSKTVGRWLK-------DRREKKREETRAQN 194

Query: 211 ARVHSALSVAALAAALAAVVAA---ENSGGSDSRMG---TALASATEILASHCIEMAEFS 270
           A++H+A+SVA +AAA+AA+ AA   ++S G+D ++    +A+ASA  ++A+ C+E AE  
Sbjct: 195 AQLHAAVSVAGVAAAVAAIAAATASQSSSGTDEQVAKNDSAVASAATLVAAKCVEAAEIM 254

Query: 271 GADHERVSSVIRSAVDVRSPGDLMTLTAAAATALRGEAAFRSRLPKEGRKIASVSPYDRI 330
           GAD E ++SV+ SAV+VRS GD+MTLTAAAATALRG A  ++R  KE   IA+V P D+ 
Sbjct: 255 GADREHLASVVSSAVNVRSAGDIMTLTAAAATALRGAAQLKARALKEVWNIAAVIPVDKG 314

Query: 331 MAQNHWATAFNSHME---------EQELPCVG-ELLQFTQKGTLRWKEVSVYINKKSQVI 355
             +          +           +EL   G ELL+ T+KG L WK VS+YIN+  QVI
Sbjct: 315 TPKGGGGGYRGGELAPVDNFLGICSKELLAKGCELLKRTRKGDLHWKVVSIYINRTKQVI 374

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8W4K52.3e-4042.59VAN3-binding protein OS=Arabidopsis thaliana OX=3702 GN=VAB PE=1 SV=1[more]
Match NameE-valueIdentityDescription
AT4G17350.14.5e-10857.03Plant protein of unknown function (DUF828) with plant pleckstrin homology-like r... [more]
AT5G47440.17.5e-9554.45Plant protein of unknown function (DUF828) with plant pleckstrin homology-like r... [more]
AT4G16670.16.6e-8348.66Plant protein of unknown function (DUF828) with plant pleckstrin homology-like r... [more]
AT3G22810.12.0e-4733.57Plant protein of unknown function (DUF828) with plant pleckstrin homology-like r... [more]
AT5G43870.12.1e-4433.41Plant protein of unknown function (DUF828) with plant pleckstrin homology-like r... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008546Domain of unknown function DUF828PFAMPF05703Auxin_canaliscoord: 38..70
e-value: 7.4E-11
score: 42.5
coord: 101..243
e-value: 5.5E-47
score: 160.9
IPR013666Pleckstrin-like, plantPFAMPF08458PH_2coord: 268..354
e-value: 2.2E-30
score: 105.1
NoneNo IPR availablePANTHERPTHR31351:SF24EXPRESSED PROTEINcoord: 8..355
IPR040269VAN3-binding proteinPANTHERPTHR31351EXPRESSED PROTEINcoord: 8..355

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh02G015330.1CmaCh02G015330.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane