CmaCh02G015270 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh02G015270
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionAltered inheritance of mitochondria protein 24, mitochondrial
LocationCma_Chr02: 8690713 .. 8695862 (+)
RNA-Seq ExpressionCmaCh02G015270
SyntenyCmaCh02G015270
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAGGTTATTTAGTAGTTTAGTTGCTCTTAGATTTCCCCCAAAAAAGAAGATAGGAAAAGAAGCTGGTCTGTTTCAATTCAACTTCTTCTTCAATTTTCCTCCCGTAATTGCCACTCGGCCGCATTAATGGTGCATAGATTTTGGACTAGAGCTCTTCTGTTCGATCTCGATCGCTAGTATTTTTTAATTGTAGTGTTTTCTGGATATGGCTGCTCCGTTCTTCTCAACGCCATTTCAGCCTTATGTTTACCAGGTGCTCTCTCCTTCTCGATTATCATTTTTTTGTTTCTAATTTGAAGTTGATTCTGGATCCTGCTTGGTTTTTGGAAAATTCTGGACGATGAAATTGGAATGTTCATTATATGTCTTATTTCTTAGTTTAGGTTGCTTTCCTGATCGTCTGTATCGCGTGTGTGATCGTTTGCCGCTTTTCTTTTGTGAGGAAGGCGTTTTACTTCCTTACGAATCTCATTGGTTTGAATTCTGAACGTTTCAAAAAATAAAAATAAAAATCGTGAACGCGGGGTTTATTGATCGGTGGAGGACATTTTGTGATTCATTAGATATGCGAGTGAGTTATGTTCTTACCAGCCTTGTTCTCACAGGCCAAATGTTAGATTCATCGATTGTAGCGCAAGGACAAGAATCCTTCTGAAATGTGCTCAATATTTTTACAAACCGCGCATGGAACTCTAAAAAAGGAGAAATAATAAATAGGAATACCGCTTAGAACAGAGTGAATCAAAGTTAGTTTCCCAGCTTTAGAGGAAAAAAAAATTTCTTCCAGGAGACTAACTTTTCATAACTATGTTCACCATTGGATTCTAAAAGGAGATGGATTTGGGATTACTCCCAAGAGGGAGACCCACGTTAGAGGAGGGAAAGGATCGAACTTCACAACCCACCACCTCCGCCCAACTCTTGAGCTTCTCCTCATCGCAGTTGAGCCTCCTAATTTAACATTTCTCTTGTTGATCTTAAGCCCAGACAAAACTTCAAAAAACATCTAGATATGATTCAAAAGGAAGAACATAATCTCATTTCTAGAGCAGAAGTAAATAGTACCACTGGCATCGATGATGCATTTGCGGGGCTGTGGAATGGACATGTACGGTAGCTAGGTTTGAAGTTCGCTAACTATATGATTGGAGTGAGCTTTTTTTTAATCTCAAAAAGTAGCTCAAGAGGTGATACATTTAAGCATTTACAAATCAACATCTAACTCGTTCTACAACCAATGTAGTATACCGAACAATATCTCCTTATGGGTTCTTTGGGTTGGATATTACCATCTACCTAATCTCTTGAAGACCGTAGAGTGTAGATTGTTTCAGAAAGTTGATCTAGACTATAATAACGTCAACATGAGCATTGCTCAACTGGTTAAGACATACGTCCTTGATCAAAAGATCAGAGATTCGAGTCGTTGAACCTAGGTTCATTGGCCTAATGGGTATTCCCGCATCCTACTCTTCCACAATCGGCATTGGCATAAGTGAAAATTATGGATATTGGACGTCAACTAAAAGAAAAATTTTAGACACTACAGTTCGCACACTAAAGAATACATGTTTGTGATCTGGCAAAAAGCCTTCAAATAAGTGATATGGGTTGATGACAGGCCAACAACTACTCTGAGTCAGCTCAGCAGTCAAAATGGCACACATGCATTGGATGCCATCCTATTTTCTAAGCAGAAGAAAATCAATGGATTAGCATAAGATTTCTCTCCCTCTTAATGTAGAGATCGCCTTGAATTGATTTTTTCAACACTACAATATTTGAAGATTTGAATACACCTTTTGGTAGCTAGGAGTGTTTAACTCATTTTATTTCATTTATCAATGAAATTGTTCTCTCTCTCTCTCTGAAGATTTGGAAGGATTAAATTTTAATAGTTCCCATTAAGTTTTATTGAATTGTAATCTAGTGTATGATGTTTCTTACTTTTGTTTTACTAACAGTGGTATGTTCTACGTCTTGTTGTAGAGTCCACAAGACGCAATGACACCTTTTCAGATTTTGGGTGGTGAAGCCCAAGTAGTACAGGTATATAATATATTGTTGCTGTTGTTATGTGTCAAATAGAGGCATCATGGTGAACTACTTTCATAGTTTTTGTCTTTCTTCTAGTACTGTATCTCTTTGTTTTCTTGTTCATTTTGCTTTGGCAGATAATGCTGAAGCCACAAGAGAAAGTTATTGCAAGGCCTGGTAAGTTGTGTTATAATAAACTTTTTTTTTTCTTGGATAAACTCGTCTTGCTCTCCATCTCTTCATAGAGAAAGATTTTTTCTATTTTTTATAAAACTTCCCTTGGGTCAAGTTCATGTTTAACATGTTTCGGATATGTCTACAACACTTGTTCGACGTGCTTTTAATTTGTACACAATATCAACACTCTGTGGACACTTGCATAAAATGATTGTTTTGTAAAAACAAATCCTTATAGTTTGTGAATAGCAAGTGGTTCAAGTTCTCCCCCATAGTGTTGGTCAATATACATCGGCACTAGATATACAGAACGTTGGCAATTTGATGATTTGTTAATGCTCTTTATCTGCTGTTTCAACTGAACTTATTCTCAATGCTCATAGGAAACTTGCAATAATAGTCATGACAGCTTTCTTTATTTCAAGAAGTTATGTTTATGAGAAGAACTGAGGTTTTCATATGGTTCATCGACTTTTACTTAATTGGTGAAACTGAACGGTTTCTTGTTTCTTTGTTACCTGTTAATTGTATGTGCAACTGATACACTTACTCTTGCAGGCTCCATGTGCTTCATGTCTGGGTCTATTGAGATGGAAAATATTTTTCTCCCGGAAAATGAAGTGGGTGTTTGGCATTGGCTATTTGGTAAGAGTGTCACTAGCATCATTCTTCGGAATTCCGGTACAAGTGATGGATATGTTGGAGTTGCTGCACCTTCTCTTGCTAGGATTCTCCCGGTAAATAATAATAATTATTATTAAAAAAAAAAGAAAAAAAAAAAGTGTTCTCATCAATATCCTCAGTGTCATATATGTTTCCACAATTATGTTGCAGATTGACATGGCAATGTTTGGTGGAGAGCTTCTATGCCAGGTAGAGAATATTGATTACTTTGTTTATTCTGCCTAGTAGCTTTTTTTGGTACTTTTCTTAACAATTGATTTTCCGTTGTCCCCTTCCCTCTCCCTCTCACTTTACATACAGTGAAAGAGATTAAATGTATATGTTTCACACATTTAAATTTTAGTTGTCTTGAATTCAAATTATTCAATTTGTCTTCTTCTGAGCTCGGTTGCCTGATAATTTTCGCTTCATTTTTCTTACGTAGCCAGATGCATTCCTCTGCTCTGTTAATGATGTAAAGGTTACCGACACAGCTTATCACAGAGTACGCAATGTTACCACAAGTGTGGAGGTGAGTTGATTTATTATTCCTTATTGGCTAAACTGCTCCATGCATCTCTGCTTTCTGGTATTAATTTTTGCTCTTCCCTATGTTTTTTTTGTTTTTCTTTTCCTCACTCTCTTTCTACTGTGGATGTTATTGTAGGGGTTTCTTAGACAGAAGTTATCAGGCCAAGGGCTCGCTTTCATTCTTGGAGGTGGATCTGGTATGCACTGCATTTTATTTTAGTAAATTCCCCAAAGGACTTGTTTGCCTCTGTTATGCAATCATGAAAACTGAAAAGAAGCTTGAGTTTCTTCTTTGAGTTTTCATGTCACCTGTTGGCTAGAGCAACTCATGTATCATTTTGTAATTAAGATTTATTTCCACACTTGTAATGGGGTCAATCACATCACAACTGCTGACCTTAAATTGTGCCAACTCATATGCTTTTATGCTAATAGGTTTCATTGGATTCAGATTGTAATCGCACTTAAAGTAGATGGAGTAACTTCTGTAATATTAATTTAATTGCTGGTGTTTGTTTTTTCTTCAGAGATTTATGGTTATTAATTTAGTACGATATACTCAATGCCTAGAAAAGAGAAGGAGATTACCTTATTTATATTGATATATTTATTTCAATCTTAAAGATGGAGAATAAAATTAATAATGTATGATATAAGTTAGCTGATTATAAAAGCTTTTCGGGTTCTGCTAGTTGTACAGAAAAATCTCGAGGTTGGTGAAGTACTATCAGTGGATATCTCCTGCATTCTGGCTATGACCACCACCATTGATGTCCAAATCAAATACAATGGTCCTGTGAGAAGAACAGTATTTGGGGTAAGATTTCTTTATGTTTATGGAGTTTGTTTTTTCTCATTACATGTCTTCTCTTCGTTGGCCAAGCAATTATTTGATTTATGGGTTATTATCTACGCAAAAGATAACTCGTTATAGGTTATGCCTTGCTTGAAATAAAGATACAATGTATGATTACACACCAAGCTTTGGTAGAGCTCTACTTTATGGGGAGGTTTTTTAACCTTTGAGGGTTTCTCTCGGGTGGGCATCTTTCTCCACTTTCTTTCATCTCTTTTTTATTTCAAAAGAAATCATAAAAATAGCAGAAGCTTCTGGTTATGAAGAAGGAAATTTTGTCCAACAATTTCAAACTCATTCTTAAGCTTTAGCCAGGCATTCTCTGTATCTGTTTGGTATACACTTTTGTCATCTTTTAACAAATCGTATTGTTAAATTTCAGGGCGACAACTTAGTGACAGCCACATTAACAGGACCAGGCATGGTCTTTATCCAGAGTTTGCCATTTCAACGACTTTCTCAGCGTATTGCGAGGTAATTACTATCGGAATTCTTTTAAGCTGTGGAAGATATCCGTTCCTCTTTTTTGCTTTGATCTTATTGGATAATGTACCAAATTTTGTAGGGCCATCACATCCCCAAATATGAGAGAAAATCCAAAGTTCTTTGTTCAGCTTGCCTTTTTCTTTTTTCTCGCTTATGTTGTGATTCTATCTTCAATAATCTTGACAGACGTATGATTTTTAAATCTTAAATCTCCCAGGGTGTTTAGCTACCCCAAAATTGGTACAAAGCTTTAGTTCTGAGTTGGAAAGCCTTTATTTATTATTATTATTATTATTTTTTTATTGATTATTGAATTTTATTTTATATATTGAAGTCCTGCAGACATCTTCCCAACTTGAATGAATGTCAGATTTGTAATTTCGGATTTGCATTTTTTT

mRNA sequence

GAAAGGTTATTTAGTAGTTTAGTTGCTCTTAGATTTCCCCCAAAAAAGAAGATAGGAAAAGAAGCTGGTCTGTTTCAATTCAACTTCTTCTTCAATTTTCCTCCCGTAATTGCCACTCGGCCGCATTAATGGTGCATAGATTTTGGACTAGAGCTCTTCTGTTCGATCTCGATCGCTAGTATTTTTTAATTGTAGTGTTTTCTGGATATGGCTGCTCCGTTCTTCTCAACGCCATTTCAGCCTTATGTTTACCAGAGTCCACAAGACGCAATGACACCTTTTCAGATTTTGGGTGGTGAAGCCCAAGTAGTACAGATAATGCTGAAGCCACAAGAGAAAGTTATTGCAAGGCCTGGCTCCATGTGCTTCATGTCTGGGTCTATTGAGATGGAAAATATTTTTCTCCCGGAAAATGAAGTGGGTGTTTGGCATTGGCTATTTGGTAAGAGTGTCACTAGCATCATTCTTCGGAATTCCGGTACAAGTGATGGATATGTTGGAGTTGCTGCACCTTCTCTTGCTAGGATTCTCCCGATTGACATGGCAATGTTTGGTGGAGAGCTTCTATGCCAGCCAGATGCATTCCTCTGCTCTGTTAATGATGTAAAGGTTACCGACACAGCTTATCACAGAGTACGCAATGTTACCACAAGTGTGGAGGGGTTTCTTAGACAGAAGTTATCAGGCCAAGGGCTCGCTTTCATTCTTGGAGGTGGATCTGTTGTACAGAAAAATCTCGAGGTTGGTGAAGTACTATCAGTGGATATCTCCTGCATTCTGGCTATGACCACCACCATTGATGTCCAAATCAAATACAATGGTCCTGTGAGAAGAACAGTATTTGGGGGCGACAACTTAGTGACAGCCACATTAACAGGACCAGGCATGGTCTTTATCCAGAGTTTGCCATTTCAACGACTTTCTCAGCGTATTGCGAGGGCCATCACATCCCCAAATATGAGAGAAAATCCAAAGTTCTTTGTTCAGCTTGCCTTTTTCTTTTTTCTCGCTTATGTTGTGATTCTATCTTCAATAATCTTGACAGACGTATGATTTTTAAATCTTAAATCTCCCAGGGTGTTTAGCTACCCCAAAATTGGTACAAAGCTTTAGTTCTGAGTTGGAAAGCCTTTATTTATTATTATTATTATTATTTTTTTATTGATTATTGAATTTTATTTTATATATTGAAGTCCTGCAGACATCTTCCCAACTTGAATGAATGTCAGATTTGTAATTTCGGATTTGCATTTTTTT

Coding sequence (CDS)

ATGGCTGCTCCGTTCTTCTCAACGCCATTTCAGCCTTATGTTTACCAGAGTCCACAAGACGCAATGACACCTTTTCAGATTTTGGGTGGTGAAGCCCAAGTAGTACAGATAATGCTGAAGCCACAAGAGAAAGTTATTGCAAGGCCTGGCTCCATGTGCTTCATGTCTGGGTCTATTGAGATGGAAAATATTTTTCTCCCGGAAAATGAAGTGGGTGTTTGGCATTGGCTATTTGGTAAGAGTGTCACTAGCATCATTCTTCGGAATTCCGGTACAAGTGATGGATATGTTGGAGTTGCTGCACCTTCTCTTGCTAGGATTCTCCCGATTGACATGGCAATGTTTGGTGGAGAGCTTCTATGCCAGCCAGATGCATTCCTCTGCTCTGTTAATGATGTAAAGGTTACCGACACAGCTTATCACAGAGTACGCAATGTTACCACAAGTGTGGAGGGGTTTCTTAGACAGAAGTTATCAGGCCAAGGGCTCGCTTTCATTCTTGGAGGTGGATCTGTTGTACAGAAAAATCTCGAGGTTGGTGAAGTACTATCAGTGGATATCTCCTGCATTCTGGCTATGACCACCACCATTGATGTCCAAATCAAATACAATGGTCCTGTGAGAAGAACAGTATTTGGGGGCGACAACTTAGTGACAGCCACATTAACAGGACCAGGCATGGTCTTTATCCAGAGTTTGCCATTTCAACGACTTTCTCAGCGTATTGCGAGGGCCATCACATCCCCAAATATGAGAGAAAATCCAAAGTTCTTTGTTCAGCTTGCCTTTTTCTTTTTTCTCGCTTATGTTGTGATTCTATCTTCAATAATCTTGACAGACGTATGA

Protein sequence

MAAPFFSTPFQPYVYQSPQDAMTPFQILGGEAQVVQIMLKPQEKVIARPGSMCFMSGSIEMENIFLPENEVGVWHWLFGKSVTSIILRNSGTSDGYVGVAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVTDTAYHRVRNVTTSVEGFLRQKLSGQGLAFILGGGSVVQKNLEVGEVLSVDISCILAMTTTIDVQIKYNGPVRRTVFGGDNLVTATLTGPGMVFIQSLPFQRLSQRIARAITSPNMRENPKFFVQLAFFFFLAYVVILSSIILTDV
Homology
[Close]
BLAST of CmaCh02G015270 vs. TAIR 10
Match: AT4G17420.1 (Tryptophan RNA-binding attenuator protein-like )

HSP 1 Score: 434.1 bits (1115), Expect = 8.5e-122
Identity = 214/285 (75.09%), Postives = 253/285 (88.77%), Query Frame = 0 

Query: 1   MAAPFFSTPFQPYVYQSPQDAMTPFQILGGEAQVVQIMLKPQEKVIARPGSMCFMSGSIE 60
           MAAPFFSTPFQPYVYQS +D +TPFQILGGEAQVVQIMLKPQEKVIA+PGSMC+MSGSIE
Sbjct: 1   MAAPFFSTPFQPYVYQSQEDTITPFQILGGEAQVVQIMLKPQEKVIAKPGSMCYMSGSIE 60

Query: 61  MENIFLPENEVGVWHWLFGKSVTSIILRNSGTSDGYVGVAAPSLARILPIDMAMFGGELL 120
           M+N + PE EVGV  W+ GKSV+SI+LRN+G +DG+VG+AAPSLARILP+D+AMFGG++L
Sbjct: 61  MDNTYTPEQEVGVVQWILGKSVSSIVLRNTGQNDGFVGIAAPSLARILPLDLAMFGGDIL 120

Query: 121 CQPDAFLCSVNDVKVTDTAY--HRVRNVTTS-VEGFLRQKLSGQGLAFILGGGSVVQKNL 180
           CQPDAFLCSV+DVKV +T Y  HR RN+  +  EG LRQ+LSGQGLAFI+ GGSVVQKNL
Sbjct: 121 CQPDAFLCSVHDVKVVNTVYQRHRARNIAAAGAEGVLRQRLSGQGLAFIIAGGSVVQKNL 180

Query: 181 EVGEVLSVDISCILAMTTTIDVQIKYN-GPVRRTVFGGDNLVTATLTGPGMVFIQSLPFQ 240
           EVGEVL++D+SCI A+T +I+ QIKYN  PVRR VFGGDN+VTATLTGPG+VFIQSLPF 
Sbjct: 181 EVGEVLTIDVSCIAALTPSINFQIKYNAAPVRRAVFGGDNVVTATLTGPGIVFIQSLPFH 240

Query: 241 RLSQRIARAITSPNMRENPKFFVQLAFFFFLAYVVILSSIILTDV 282
           RLSQRIAR++TSPNMRENP+  VQ+  F FLAYVVI+SS+ILT++
Sbjct: 241 RLSQRIARSVTSPNMRENPRLLVQIGLFIFLAYVVIVSSLILTEM 285

[Close]
BLAST of CmaCh02G015270 vs. TAIR 10
Match: AT5G47420.1 (Tryptophan RNA-binding attenuator protein-like )

HSP 1 Score: 424.9 bits (1091), Expect = 5.2e-119
Identity = 210/282 (74.47%), Postives = 244/282 (86.52%), Query Frame = 0 

Query: 1   MAAPFFSTPFQPYVYQSPQDAMTPFQILGGEAQVVQIMLKPQEKVIARPGSMCFMSGSIE 60
           MAAPFFSTPFQPYVYQS QD +TPFQILGGE+QVVQIMLK +EKVIA+P SMC+MSGSIE
Sbjct: 1   MAAPFFSTPFQPYVYQSQQDTITPFQILGGESQVVQIMLKSEEKVIAKPASMCYMSGSIE 60

Query: 61  MENIFLPENEVGVWHWLFGKSVTSIILRNSGTSDGYVGVAAPSLARILPIDMAMFGGELL 120
           MEN + PE EVGV  W+ GKSV+S++LRN+G +DG+VG+AAP LARILPID+AMFGGE+L
Sbjct: 61  MENTYTPEQEVGVLQWILGKSVSSVVLRNTGQNDGFVGIAAPYLARILPIDLAMFGGEIL 120

Query: 121 CQPDAFLCSVNDVKVTDTAYHRVRN-VTTSVEGFLRQKLSGQGLAFILGGGSVVQKNLEV 180
           CQPDAFLCSV+DVKV ++   R RN V    EGFLRQ+LSGQGLAFIL GGSVVQK LEV
Sbjct: 121 CQPDAFLCSVHDVKVVNSVDQRARNIVAAGAEGFLRQRLSGQGLAFILAGGSVVQKVLEV 180

Query: 181 GEVLSVDISCILAMTTTIDVQIKYNGPVRRTVFGGDNLVTATLTGPGMVFIQSLPFQRLS 240
           GEV S+D+SCI A+T +IDV+IK N P RR +FGGDN+V ATLTGPG+VFIQSLPF RLS
Sbjct: 181 GEVFSIDVSCIAALTPSIDVRIKNNAPFRRALFGGDNVVMATLTGPGIVFIQSLPFHRLS 240

Query: 241 QRIARAITSPNMRENPKFFVQLAFFFFLAYVVILSSIILTDV 282
           QRIAR++TSPNMRENPK  +Q+A F FLAY VILSS+ILT+V
Sbjct: 241 QRIARSVTSPNMRENPKLLIQIAIFAFLAYAVILSSLILTEV 282

[Close]
BLAST of CmaCh02G015270 vs. TAIR 10
Match: AT4G17420.3 (Tryptophan RNA-binding attenuator protein-like )

HSP 1 Score: 389.8 bits (1000), Expect = 1.8e-108
Identity = 190/259 (73.36%), Postives = 224/259 (86.49%), Query Frame = 0 

Query: 1   MAAPFFSTPFQPYVYQSPQDAMTPFQILGGEAQVVQIMLKPQEKVIARPGSMCFMSGSIE 60
           MAAPFFSTPFQPYVYQS +D +TPFQILGGEAQVVQIMLKPQEKVIA+PGSMC+MSGSIE
Sbjct: 1   MAAPFFSTPFQPYVYQSQEDTITPFQILGGEAQVVQIMLKPQEKVIAKPGSMCYMSGSIE 60

Query: 61  MENIFLPENEVGVWHWLFGKSVTSIILRNSGTSDGYVGVAAPSLARILPIDMAMFGGELL 120
           M+N + PE EVGV  W+ GKSV+SI+LRN+G +DG+VG+AAPSLARILP+D+AMFGG++L
Sbjct: 61  MDNTYTPEQEVGVVQWILGKSVSSIVLRNTGQNDGFVGIAAPSLARILPLDLAMFGGDIL 120

Query: 121 CQPDAFLCSVNDVKVTDTAY--HRVRNVTTSVEGFLRQKLSGQGLAFILGGGSVVQKNLE 180
           CQPDAFLCSV+DVKV +T Y  HR RN+  +           +GLAFI+ GGSVVQKNLE
Sbjct: 121 CQPDAFLCSVHDVKVVNTVYQRHRARNIAAA---------GAEGLAFIIAGGSVVQKNLE 180

Query: 181 VGEVLSVDISCILAMTTTIDVQIKYN-GPVRRTVFGGDNLVTATLTGPGMVFIQSLPFQR 240
           VGEVL++D+SCI A+T +I+ QIKYN  PVRR VFGGDN+VTATLTGPG+VFIQSLPF R
Sbjct: 181 VGEVLTIDVSCIAALTPSINFQIKYNAAPVRRAVFGGDNVVTATLTGPGIVFIQSLPFHR 240

Query: 241 LSQRIARAITSPNMRENPK 257
           LSQRIAR++TSPNMRENP+
Sbjct: 241 LSQRIARSVTSPNMRENPR 250

[Close]
BLAST of CmaCh02G015270 vs. TAIR 10
Match: AT4G17420.2 (Tryptophan RNA-binding attenuator protein-like )

HSP 1 Score: 366.7 bits (940), Expect = 1.7e-101
Identity = 181/247 (73.28%), Postives = 212/247 (85.83%), Query Frame = 0 

Query: 1   MAAPFFSTPFQPYVYQSPQDAMTPFQILGGEAQVVQIMLKPQEKVIARPGSMCFMSGSIE 60
           MAAPFFSTPFQPYVYQS +D +TPFQILGGEAQVVQIMLKPQEKVIA+PGSMC+MSGSIE
Sbjct: 1   MAAPFFSTPFQPYVYQSQEDTITPFQILGGEAQVVQIMLKPQEKVIAKPGSMCYMSGSIE 60

Query: 61  MENIFLPENEVGVWHWLFGKSVTSIILRNSGTSDGYVGVAAPSLARILPIDMAMFGGELL 120
           M+N + PE EVGV  W+ GKSV+SI+LRN+G +DG+VG+AAPSLARILP+D+AMFGG++L
Sbjct: 61  MDNTYTPEQEVGVVQWILGKSVSSIVLRNTGQNDGFVGIAAPSLARILPLDLAMFGGDIL 120

Query: 121 CQPDAFLCSVNDVKVTDTAY--HRVRNVTTSVEGFLRQKLSGQGLAFILGGGSVVQKNLE 180
           CQPDAFLCSV+DVKV +T Y  HR RN+  +           +GLAFI+ GGSVVQKNLE
Sbjct: 121 CQPDAFLCSVHDVKVVNTVYQRHRARNIAAA---------GAEGLAFIIAGGSVVQKNLE 180

Query: 181 VGEVLSVDISCILAMTTTIDVQIKYN-GPVRRTVFGGDNLVTATLTGPGMVFIQSLPFQR 240
           VGEVL++D+SCI A+T +I+ QIKYN  PVRR VFGGDN+VTATLTGPG+VFIQSLPF R
Sbjct: 181 VGEVLTIDVSCIAALTPSINFQIKYNAAPVRRAVFGGDNVVTATLTGPGIVFIQSLPFHR 238

Query: 241 LSQRIAR 245
           LSQRIAR
Sbjct: 241 LSQRIAR 238

The following BLAST results are available for this feature:
BLAST of CmaCh02G015270 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh02G015270 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G17420.18.5e-12275.09Tryptophan RNA-binding attenuator protein-like [more]
AT5G47420.15.2e-11974.47Tryptophan RNA-binding attenuator protein-like [more]
AT4G17420.31.8e-10873.36Tryptophan RNA-binding attenuator protein-like [more]
AT4G17420.21.7e-10173.28Tryptophan RNA-binding attenuator protein-like [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002838Mitochondrial biogenesis protein AIM24PFAMPF01987AIM24coord: 25..232
e-value: 6.5E-45
score: 153.4
IPR036983Mitochondrial biogenesis AIM24 superfamilyGENE3D3.60.160.10Mitochondrial biogenesis AIM24coord: 19..255
e-value: 1.1E-62
score: 213.4
NoneNo IPR availablePANTHERPTHR43657:SF2TRYPTOPHAN RNA-BINDING ATTENUATOR PROTEIN-LIKE PROTEINcoord: 1..280
NoneNo IPR availablePANTHERPTHR43657TRYPTOPHAN RNA-BINDING ATTENUATOR PROTEIN-LIKE PROTEINcoord: 1..280
IPR016031Tryptophan RNA-binding attenuator protein-like domain superfamilySUPERFAMILY51219TRAP-likecoord: 23..252

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh02G015270.1CmaCh02G015270.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane