CmaCh02G014940 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh02G014940
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionagamous-like MADS-box protein AGL19
LocationCma_Chr02: 8539914 .. 8543899 (+)
RNA-Seq ExpressionCmaCh02G014940
SyntenyCmaCh02G014940
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TATTTTGTTTCCTGAGATTTCCCGAAAAAGAAAGAGATCAGGTTCTTCATCACTTCAAATTCTCTTTCCTTCTAAGCCTTTCTTCTTCTTCTTCTTCTTCTCTTACACTTCTAGGGTTCTTCTAAGCTAAACTCCTCCTCCACTACATTCTCCTCCACGAGAAATCAAACCATTACTTCAATCCCTTTCTTTTCTCTCTTTTCAAATATTCAAAAACCCACCACTTTCAGAGGTGAGCCTTGTAAAAATTTGATTTTGATCCATTTATTCAAATGGGGTTTCATTAAATTCTGTTTGATTTCTGGGTTTTGATCATTTTTGTATTTTTCGTGAGATTTTTCTCCAAATCTGACCTTTGTTGTCGAAAAAGGAAGCAGCTTTGAGAGAAAGGTTAAGAAAAATGGTGAGGGGAAAGACCCAAATGAAGCGCATAGAGAATGCTACAAGCCGGCAAGTGACCTTCTCAAAGCGGAGAAATGGGCTGCTCAAGAAGGCCTTTGAGCTATCAGTTCTTTGTGATGCTGAAGTTGCTCTCATCATTTTCTCTCCAAGAGGCAAACTTTATGAGTTTTCAAATTGCAGGTACTTTTTTCCTTCCTTTATTTTCAAAAACCTCTCTTCAAATCTCTCAAATCACCGTCCTTTTGGGGTTAATTCTTAATTAACTTGTGTGTTTGTTTGTTTTCTTTTGGGCACTGTCTATTTCCCTTGGCTCTTCTATTTCTTTCTCTCTTTGCAATCAAATTAGTACTGCCGTCCTTCTCTTATTTACCTAACCCCAACAAGATTTGCATTAATGGGTCACTGCCTTAAACTCATTTCAAATCTTTTCTACCGTTCGCTTCCTGATCTAGGGCTTGTCTGGGGACTACATTATTTTGTTTGTTTCTTCTTGAGTAATTGAGGATCACTTGGTAGATTTGTTTTTGAACAATTTTTAAAAATAAATTTTGTATATTTTCAATGTATGTTCATAATATTTCATGTTATAAACTTATTCTAGTTTTGTTGCCTTTAACTGATGCATAATAATAATAATAATCATAAGGCTTAGAATCAAAAGTAGTCCTTAAAAGGAATGAAATTTCTCTATCTCCAAGGTCATTCTCAGGCTTTGTAGATAAACAAAAAAAAAAAAAATAATAATAATTTAAGGAAATGCTAGGCTATCCCGAAATAGGAAGCTATAAGAACTTTAATAGGGACATGAGTAAGAACATTTAGCTTCAGAATCCAATGGGAGATCAAATTTCACGATGCCCCATTTGGTTATTTAATTCCACGCATGGCTTTGAAGGTCACATCCCAATGAACATGGGAAATCTTGGTCGTTCATTTTAAACTAACCCTTTGATTAAAGTTCCAATCTTTCCAATGAACAAAGTTTGAATGTGGCAATTGGATTAAAATGAGTAATTAATATTAAGTTCTAAGTTTGAATGTGGAGTTAATTTTGTTATTGGGATGGAGATGTTTCAGTATGAACAAGACAATTGATCGGTATCAGAACAGAACCAAAGAAATGATGTGTTCAAACAACCAAGGTTTAGAAGATGTGCAGGTTGGTTGATTCTCAAACACATTCATGTTTGTGGTTCCTTATAAGCATCGAAAATCAAACAGAAACAAAAACATATCTGTTTTTTTTTTTTTTTTTTTTTTTTTTCCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTGTTTTCCATGTTTCATGTGTTTGAATAATCTGATGAACTGATGAATTTGTTTGGATTGAAAGTTGGAGAAGGACTGCATGACTAAGAAGTTACAGCACCTTGAAGTTTGTAAAAGGTTTGAGATTATTTTGAAGAACACGAAAAAAAAAATTCTCTCCTATTTTCTTACATATTTATTAATCTACAAACATGCTCAAGCTCTCATGAAATAGTACAGAAAATTGATGGGAGATGGCTTGGATTTGTGCTCCATGGAAGAGTTGCAGCAGCTTGAAAGGCAAATTGAAAGAAGCTTAACCAAAATTAGGTCAAGAAAGGTACATTCATGTCTGAGATTCTAAAACATTTCCCCTTTTTAGATTTGTTCTTATTTTGTTTCAATTTCAGTATCAATTGCTGAAGGAAGAAATTACGAAGCTGAAGGAAGAGGTAATTTTCATTACGTTATTTATATAAATGAATTAAAACTATTGGTGATTTGAATTTTGATTTGGTGAATAGGAGAAGATGTTGCTGGAAGAAAATGCAGCTCTCCTGAAGAAGGTCAAGCAATCTTTTTCCCTGGAACTGTTCCTCGTACAAATCCATAAAATTCAAACAAGAAAATGAATGGTTTTTCAGGTTGGAAGTGAATGGAAGCACCAAGAAGAGGCCATGGATGTTGAGACCCAACTGTTCATAGGGCCATCAGAAAGAAGAGGCGGCAGTGGCTTCCTGTGTAGATATCTTCATAATCAACCCACTTAATAAAGACACAAGCTTTGTGTTGAACCCCCCAAAAAAGGTGAGTTTTTTACATGCAGTATTAACACTACAAGTGAAACCAAAAAAACTGGTTTCTGATAAAATGTTTGATTAAATACTGTTTCGAGGAATCAAACTATCTGTATATTTAGGAAGAGTTCCTTGTCGGATAATGTTCTTTTCTACCTGATTTTTCCATGTGGTTTCACTGCATAACATGTTTATGTTTCTCTTTTTATGGTTACGTTGCTTTTAAAAAAATGTGGAAATTTGGTGGTTTAATGAAATCATAATAAAGTTAAGTTAGGGTTATGGGCTTTTCTCTCCCATGTGCAGTATCGTACAGAGAGATTGAATCACCCAAAAGTTGAACCCTAATTTGGAAATTAGGATTTTACCCAAAATTGGCTGTCCTTCTGATTTCCTTCATTTTCCCCAAATTTGGTGGGACTTGTGACAATGACCTCCACCAATTAAACCCTCAAATTTCTTCTTTATAACATTAACTATTTTTTTTTCTTTCAAAACTATGTATTATATCACCCAAAATTAGTCTTTTAGAAGCAAGAAATAAGATGTAGGAGAACGTCGGGACCATTATGTGCTTTTCCGAATTTTAGGCATGAATTCTATTATGAACGTGTTGTTAAATTTTTAACTCTTCAAATTATTGTTTAACCAATGTATTTTTTTAGTTAAATATTTAGAATTTAAAGTTTTAAAGTGCTGATTGATATTTTAACTTAGAAACAAAAATCTTTCTTTCCCATCCCGTGATTAATAATTCTATAGTATTTGGCTCATGAATAACGTTGTAAACTACTACCATGAACTCTGAACGATTGTTGGTTCTTTTCAATAGAGGAGAAGTTAGGAATTTCATATCTCAGACAACCGTAATAGTTTTGACGTGACACTTTGAATGAACATGTTATAATGATTCATGTATATATGGGGATACTTTTCTCTCATAAAAACGAAAGTAAGTAATATGATCATGTTGGAGTCGGATGCACAGGCCATCACATATCGAATCTGGATTCGAACGAAAAATTCAATCTTTCTCACATCTATCCAAAAGGAGATATAGGTAGGGTAAGTTTAGATAGAAACATACAATCTTGAGAGTGGGGTAAGAATCTTGCATGTGAAAGATTGAAATGATACGACGATCCCACCAAGATTTAATTTTAAAAAATAATTATACAGGTAGGGACAACAACAACGTTTAA

mRNA sequence

TATTTTGTTTCCTGAGATTTCCCGAAAAAGAAAGAGATCAGGTTCTTCATCACTTCAAATTCTCTTTCCTTCTAAGCCTTTCTTCTTCTTCTTCTTCTTCTCTTACACTTCTAGGGTTCTTCTAAGCTAAACTCCTCCTCCACTACATTCTCCTCCACGAGAAATCAAACCATTACTTCAATCCCTTTCTTTTCTCTCTTTTCAAATATTCAAAAACCCACCACTTTCAGAGGAAGCAGCTTTGAGAGAAAGGTTAAGAAAAATGGTGAGGGGAAAGACCCAAATGAAGCGCATAGAGAATGCTACAAGCCGGCAAGTGACCTTCTCAAAGCGGAGAAATGGGCTGCTCAAGAAGGCCTTTGAGCTATCAGTTCTTTGTGATGCTGAAGTTGCTCTCATCATTTTCTCTCCAAGAGGCAAACTTTATGAGTTTTCAAATTGCAGTATGAACAAGACAATTGATCGGTATCAGAACAGAACCAAAGAAATGATGTGTTCAAACAACCAAGGTTTAGAAGATGTGCAGTTGGAGAAGGACTGCATGACTAAGAAGTTACAGCACCTTGAAGTTTGTAAAAGAAAATTGATGGGAGATGGCTTGGATTTGTGCTCCATGGAAGAGTTGCAGCAGCTTGAAAGGCAAATTGAAAGAAGCTTAACCAAAATTAGGTCAAGAAAGTATCAATTGCTGAAGGAAGAAATTACGAAGCTGAAGGAAGAGGAGAAGATGTTGCTGGAAGAAAATGCAGCTCTCCTGAAGAAGGTCAAGCAATCTTTTTCCCTGGAACTGTTCCTCGTTGGAAGTGAATGGAAGCACCAAGAAGAGGCCATGGATGTTGAGACCCAACTGTTCATAGGGCCATCAGAAAGAAGAGGCGGCAGTGGCTTCCTGTGTAGGGACAACAACAACGTTTAA

Coding sequence (CDS)

ATGGTGAGGGGAAAGACCCAAATGAAGCGCATAGAGAATGCTACAAGCCGGCAAGTGACCTTCTCAAAGCGGAGAAATGGGCTGCTCAAGAAGGCCTTTGAGCTATCAGTTCTTTGTGATGCTGAAGTTGCTCTCATCATTTTCTCTCCAAGAGGCAAACTTTATGAGTTTTCAAATTGCAGTATGAACAAGACAATTGATCGGTATCAGAACAGAACCAAAGAAATGATGTGTTCAAACAACCAAGGTTTAGAAGATGTGCAGTTGGAGAAGGACTGCATGACTAAGAAGTTACAGCACCTTGAAGTTTGTAAAAGAAAATTGATGGGAGATGGCTTGGATTTGTGCTCCATGGAAGAGTTGCAGCAGCTTGAAAGGCAAATTGAAAGAAGCTTAACCAAAATTAGGTCAAGAAAGTATCAATTGCTGAAGGAAGAAATTACGAAGCTGAAGGAAGAGGAGAAGATGTTGCTGGAAGAAAATGCAGCTCTCCTGAAGAAGGTCAAGCAATCTTTTTCCCTGGAACTGTTCCTCGTTGGAAGTGAATGGAAGCACCAAGAAGAGGCCATGGATGTTGAGACCCAACTGTTCATAGGGCCATCAGAAAGAAGAGGCGGCAGTGGCTTCCTGTGTAGGGACAACAACAACGTTTAA

Protein sequence

MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSNCSMNKTIDRYQNRTKEMMCSNNQGLEDVQLEKDCMTKKLQHLEVCKRKLMGDGLDLCSMEELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAALLKKVKQSFSLELFLVGSEWKHQEEAMDVETQLFIGPSERRGGSGFLCRDNNNV
Homology
[Close]
BLAST of CmaCh02G014940 vs. ExPASy Swiss-Prot
Match: O82743 (Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana OX=3702 GN=AGL19 PE=1 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 5.2e-55
Identity = 124/215 (57.67%), Postives = 160/215 (74.42%), Query Frame = 0 

Query: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSNC 60
           MVRGKT+MKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAL+IFSPR KLYEFS+ 
Sbjct: 1   MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSS 60

Query: 61  SMNKTIDRYQNRTKEMMCSN--NQGLEDVQLEKDCMTKKLQHLEVCKRKLMGDGLDLCSM 120
           S+  TI+RYQ R KE+  ++  N   +  + E   +TKK++ LE+ KRKL+G+G+D CS+
Sbjct: 61  SIAATIERYQRRIKEIGNNHKRNDNSQQARDETSGLTKKIEQLEISKRKLLGEGIDACSI 120

Query: 121 EELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAALLKK----VKQSFSL 180
           EELQQLE Q++RSL++IR++KYQLL+EEI KLK EE+ L++EN  L +K       + + 
Sbjct: 121 EELQQLENQLDRSLSRIRAKKYQLLREEIEKLKAEERNLVKENKDLKEKWLGMGTATIAS 180

Query: 181 ELFLVGSEWKHQEEAMDVETQLFIGPSERRGGSGF 210
               + S   + ++ M+VET LFIGP E R    F
Sbjct: 181 SQSTLSSSEVNIDDNMEVETGLFIGPPETRQSKKF 215

[Close]
BLAST of CmaCh02G014940 vs. ExPASy Swiss-Prot
Match: Q38838 (Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana OX=3702 GN=AGL14 PE=1 SV=2)

HSP 1 Score: 208.4 bits (529), Expect = 8.3e-53
Identity = 124/213 (58.22%), Postives = 159/213 (74.65%), Query Frame = 0 

Query: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEF-SN 60
           MVRGKT+MKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEF S+
Sbjct: 1   MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSS 60

Query: 61  CSMNKTIDRYQNRTKEMMCSNNQGLEDVQLEKD---CMTKKLQHLEVCKRKLMGDGLDLC 120
            S+ KT++RYQ R ++ + SN++  ++ Q  KD    + +K++HLE+  RK+MG+GLD  
Sbjct: 61  SSIPKTVERYQKRIQD-LGSNHKRNDNSQQSKDETYGLARKIEHLEISTRKMMGEGLDAS 120

Query: 121 SMEELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAALLKKVKQSFSLEL 180
           S+EELQQLE Q++RSL KIR++KYQLL+EE  KLKE+E+ L+ EN  L++K +      +
Sbjct: 121 SIEELQQLENQLDRSLMKIRAKKYQLLREETEKLKEKERNLIAENKMLMEKCEMQGRGII 180

Query: 181 FLVG-----SEWKHQEEAMDVETQLFIGPSERR 205
             +      SE    +  M+V T LFIGP E R
Sbjct: 181 GRISSSSSTSELDIDDNEMEVVTDLFIGPPETR 212

[Close]
BLAST of CmaCh02G014940 vs. ExPASy Swiss-Prot
Match: Q9XJ60 (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS50 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 5.9e-51
Identity = 124/224 (55.36%), Postives = 157/224 (70.09%), Query Frame = 0 

Query: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSNC 60
           MVRGKTQMKRIEN TSRQVTFSKRRNGLLKKAFELSVLCDAEVALI+FSPRGKLYEF++ 
Sbjct: 1   MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASA 60

Query: 61  SMNKTIDRYQNRTKEMMCSN--NQGLEDVQLEKDCMTKKLQHLEVCKRKLMGDGLDLCSM 120
           S  KTI+RY+  TKE + +    Q +E V+ + D + KKL+ LE  KRKL+G+ LD CS+
Sbjct: 61  STQKTIERYRTYTKENIGNKTVQQDIEQVKADADGLAKKLEALETYKRKLLGEKLDECSI 120

Query: 121 EELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAALLKKVKQSFSLELFL 180
           EEL  LE ++ERSL  IR RK +LL+E++ KL+E+E  L ++N  L +K K    L   L
Sbjct: 121 EELHSLEVKLERSLISIRGRKTKLLEEQVAKLREKEMKLRKDNEELREKCKNQPPLSAPL 180

Query: 181 -VGSEWKHQE-------EAMDVETQLFIGPSERRGGSGFLCRDN 215
            V +E ++ +       + MDVET+LFIG   R   SG    D+
Sbjct: 181 TVRAEDENPDRNINTTNDNMDVETELFIGLPGRSRSSGGAAEDS 224

[Close]
BLAST of CmaCh02G014940 vs. ExPASy Swiss-Prot
Match: O64645 (MADS-box protein SOC1 OS=Arabidopsis thaliana OX=3702 GN=SOC1 PE=1 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.1e-48
Identity = 114/208 (54.81%), Postives = 151/208 (72.60%), Query Frame = 0 

Query: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSNC 60
           MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEV+LIIFSP+GKLYEF++ 
Sbjct: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS 60

Query: 61  SMNKTIDRYQNRTKEMMCS---NNQGLEDVQLEKDCMTKKLQHLEVCKRKLMGDGLDLCS 120
           +M  TIDRY   TK+ + +   + + ++ ++ E   M KK++ LE  KRKL+G+G+  CS
Sbjct: 61  NMQDTIDRYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGTCS 120

Query: 121 MEELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAALLKKVKQSFSLELF 180
           +EELQQ+E+Q+E+S+  IR+RK Q+ KE+I +LK++EK L  EN  L +K   S   E++
Sbjct: 121 IEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEK-WGSHESEVW 180

Query: 181 ------LVGSEWKHQEEAMDVETQLFIG 200
                   G   +    + +VETQLFIG
Sbjct: 181 SNKNQESTGRGDEESSPSSEVETQLFIG 207

[Close]
BLAST of CmaCh02G014940 vs. ExPASy Swiss-Prot
Match: Q9FIS1 (MADS-box protein AGL42 OS=Arabidopsis thaliana OX=3702 GN=AGL42 PE=1 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.6e-46
Identity = 112/212 (52.83%), Postives = 148/212 (69.81%), Query Frame = 0 

Query: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSNC 60
           MVRGK +MK+IENATSRQVTFSKRRNGLLKKA+ELSVLCDA+++LIIFS RG+LYEFS+ 
Sbjct: 1   MVRGKIEMKKIENATSRQVTFSKRRNGLLKKAYELSVLCDAQLSLIIFSQRGRLYEFSSS 60

Query: 61  SMNKTIDRYQNRTKEMMCSNNQG---LEDVQLEKDCMTKKLQHLEVCKRKLMGDGLDLCS 120
            M KTI+RY+  TK+   SN+     L+ ++ E   M  K++ LE  KRKL+G G+  CS
Sbjct: 61  DMQKTIERYRKYTKDHETSNHDSQIHLQQLKQEASHMITKIELLEFHKRKLLGQGIASCS 120

Query: 121 MEELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAALLKKVKQSFSLELF 180
           +EELQ+++ Q++RSL K+R RK QL KE++ KLK +EK LLEEN     K+ Q   +  +
Sbjct: 121 LEELQEIDSQLQRSLGKVRERKAQLFKEQLEKLKAKEKQLLEENV----KLHQKNVINPW 180

Query: 181 LVGSEWKHQEE------AMDVETQLFIGPSER 204
              S  + QE+       ++VET LFIG   R
Sbjct: 181 RGSSTDQQQEKYKVIDLNLEVETDLFIGLPNR 208

[Close]
BLAST of CmaCh02G014940 vs. TAIR 10
Match: AT4G22950.1 (AGAMOUS-like 19 )

HSP 1 Score: 215.7 bits (548), Expect = 3.7e-56
Identity = 124/215 (57.67%), Postives = 160/215 (74.42%), Query Frame = 0 

Query: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSNC 60
           MVRGKT+MKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAL+IFSPR KLYEFS+ 
Sbjct: 1   MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSS 60

Query: 61  SMNKTIDRYQNRTKEMMCSN--NQGLEDVQLEKDCMTKKLQHLEVCKRKLMGDGLDLCSM 120
           S+  TI+RYQ R KE+  ++  N   +  + E   +TKK++ LE+ KRKL+G+G+D CS+
Sbjct: 61  SIAATIERYQRRIKEIGNNHKRNDNSQQARDETSGLTKKIEQLEISKRKLLGEGIDACSI 120

Query: 121 EELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAALLKK----VKQSFSL 180
           EELQQLE Q++RSL++IR++KYQLL+EEI KLK EE+ L++EN  L +K       + + 
Sbjct: 121 EELQQLENQLDRSLSRIRAKKYQLLREEIEKLKAEERNLVKENKDLKEKWLGMGTATIAS 180

Query: 181 ELFLVGSEWKHQEEAMDVETQLFIGPSERRGGSGF 210
               + S   + ++ M+VET LFIGP E R    F
Sbjct: 181 SQSTLSSSEVNIDDNMEVETGLFIGPPETRQSKKF 215

[Close]
BLAST of CmaCh02G014940 vs. TAIR 10
Match: AT4G11880.1 (AGAMOUS-like 14 )

HSP 1 Score: 208.4 bits (529), Expect = 5.9e-54
Identity = 124/213 (58.22%), Postives = 159/213 (74.65%), Query Frame = 0 

Query: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEF-SN 60
           MVRGKT+MKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEF S+
Sbjct: 1   MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSS 60

Query: 61  CSMNKTIDRYQNRTKEMMCSNNQGLEDVQLEKD---CMTKKLQHLEVCKRKLMGDGLDLC 120
            S+ KT++RYQ R ++ + SN++  ++ Q  KD    + +K++HLE+  RK+MG+GLD  
Sbjct: 61  SSIPKTVERYQKRIQD-LGSNHKRNDNSQQSKDETYGLARKIEHLEISTRKMMGEGLDAS 120

Query: 121 SMEELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAALLKKVKQSFSLEL 180
           S+EELQQLE Q++RSL KIR++KYQLL+EE  KLKE+E+ L+ EN  L++K +      +
Sbjct: 121 SIEELQQLENQLDRSLMKIRAKKYQLLREETEKLKEKERNLIAENKMLMEKCEMQGRGII 180

Query: 181 FLVG-----SEWKHQEEAMDVETQLFIGPSERR 205
             +      SE    +  M+V T LFIGP E R
Sbjct: 181 GRISSSSSTSELDIDDNEMEVVTDLFIGPPETR 212

[Close]
BLAST of CmaCh02G014940 vs. TAIR 10
Match: AT2G45660.1 (AGAMOUS-like 20 )

HSP 1 Score: 193.7 bits (491), Expect = 1.5e-49
Identity = 114/208 (54.81%), Postives = 151/208 (72.60%), Query Frame = 0 

Query: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSNC 60
           MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEV+LIIFSP+GKLYEF++ 
Sbjct: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS 60

Query: 61  SMNKTIDRYQNRTKEMMCS---NNQGLEDVQLEKDCMTKKLQHLEVCKRKLMGDGLDLCS 120
           +M  TIDRY   TK+ + +   + + ++ ++ E   M KK++ LE  KRKL+G+G+  CS
Sbjct: 61  NMQDTIDRYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGTCS 120

Query: 121 MEELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAALLKKVKQSFSLELF 180
           +EELQQ+E+Q+E+S+  IR+RK Q+ KE+I +LK++EK L  EN  L +K   S   E++
Sbjct: 121 IEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEK-WGSHESEVW 180

Query: 181 ------LVGSEWKHQEEAMDVETQLFIG 200
                   G   +    + +VETQLFIG
Sbjct: 181 SNKNQESTGRGDEESSPSSEVETQLFIG 207

[Close]
BLAST of CmaCh02G014940 vs. TAIR 10
Match: AT5G62165.1 (AGAMOUS-like 42 )

HSP 1 Score: 186.8 bits (473), Expect = 1.8e-47
Identity = 112/212 (52.83%), Postives = 148/212 (69.81%), Query Frame = 0 

Query: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSNC 60
           MVRGK +MK+IENATSRQVTFSKRRNGLLKKA+ELSVLCDA+++LIIFS RG+LYEFS+ 
Sbjct: 1   MVRGKIEMKKIENATSRQVTFSKRRNGLLKKAYELSVLCDAQLSLIIFSQRGRLYEFSSS 60

Query: 61  SMNKTIDRYQNRTKEMMCSNNQG---LEDVQLEKDCMTKKLQHLEVCKRKLMGDGLDLCS 120
            M KTI+RY+  TK+   SN+     L+ ++ E   M  K++ LE  KRKL+G G+  CS
Sbjct: 61  DMQKTIERYRKYTKDHETSNHDSQIHLQQLKQEASHMITKIELLEFHKRKLLGQGIASCS 120

Query: 121 MEELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAALLKKVKQSFSLELF 180
           +EELQ+++ Q++RSL K+R RK QL KE++ KLK +EK LLEEN     K+ Q   +  +
Sbjct: 121 LEELQEIDSQLQRSLGKVRERKAQLFKEQLEKLKAKEKQLLEENV----KLHQKNVINPW 180

Query: 181 LVGSEWKHQEE------AMDVETQLFIGPSER 204
              S  + QE+       ++VET LFIG   R
Sbjct: 181 RGSSTDQQQEKYKVIDLNLEVETDLFIGLPNR 208

[Close]
BLAST of CmaCh02G014940 vs. TAIR 10
Match: AT5G62165.2 (AGAMOUS-like 42 )

HSP 1 Score: 186.8 bits (473), Expect = 1.8e-47
Identity = 112/212 (52.83%), Postives = 148/212 (69.81%), Query Frame = 0 

Query: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSNC 60
           MVRGK +MK+IENATSRQVTFSKRRNGLLKKA+ELSVLCDA+++LIIFS RG+LYEFS+ 
Sbjct: 1   MVRGKIEMKKIENATSRQVTFSKRRNGLLKKAYELSVLCDAQLSLIIFSQRGRLYEFSSS 60

Query: 61  SMNKTIDRYQNRTKEMMCSNNQG---LEDVQLEKDCMTKKLQHLEVCKRKLMGDGLDLCS 120
            M KTI+RY+  TK+   SN+     L+ ++ E   M  K++ LE  KRKL+G G+  CS
Sbjct: 61  DMQKTIERYRKYTKDHETSNHDSQIHLQQLKQEASHMITKIELLEFHKRKLLGQGIASCS 120

Query: 121 MEELQQLERQIERSLTKIRSRKYQLLKEEITKLKEEEKMLLEENAALLKKVKQSFSLELF 180
           +EELQ+++ Q++RSL K+R RK QL KE++ KLK +EK LLEEN     K+ Q   +  +
Sbjct: 121 LEELQEIDSQLQRSLGKVRERKAQLFKEQLEKLKAKEKQLLEENV----KLHQKNVINPW 180

Query: 181 LVGSEWKHQEE------AMDVETQLFIGPSER 204
              S  + QE+       ++VET LFIG   R
Sbjct: 181 RGSSTDQQQEKYKVIDLNLEVETDLFIGLPNR 208

The following BLAST results are available for this feature:
BLAST of CmaCh02G014940 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O827435.2e-5557.67Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana OX=3702 GN=AGL19 PE=... [more]
Q388388.3e-5358.22Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana OX=3702 GN=AGL14 PE=... [more]
Q9XJ605.9e-5155.36MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD... [more]
O646452.1e-4854.81MADS-box protein SOC1 OS=Arabidopsis thaliana OX=3702 GN=SOC1 PE=1 SV=1[more]
Q9FIS12.6e-4652.83MADS-box protein AGL42 OS=Arabidopsis thaliana OX=3702 GN=AGL42 PE=1 SV=1[more]
BLAST of CmaCh02G014940 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G22950.13.7e-5657.67AGAMOUS-like 19 [more]
AT4G11880.15.9e-5458.22AGAMOUS-like 14 [more]
AT2G45660.11.5e-4954.81AGAMOUS-like 20 [more]
AT5G62165.11.8e-4752.83AGAMOUS-like 42 [more]
AT5G62165.21.8e-4752.83AGAMOUS-like 42 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 140..167
NoneNo IPR availableCOILSCoilCoilcoord: 118..138
NoneNo IPR availablePANTHERPTHR11945:SF341MADS-BOX PROTEIN SOC1coord: 1..202
NoneNo IPR availablePANTHERPTHR11945MADS BOX PROTEINcoord: 1..202
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 23..38
score: 83.07
coord: 38..59
score: 65.66
coord: 3..23
score: 66.59
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 1..60
e-value: 1.1E-39
score: 147.8
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 10..57
e-value: 8.5E-27
score: 92.5
IPR002100Transcription factor, MADS-boxPROSITEPS00350MADS_BOX_1coord: 3..57
IPR002100Transcription factor, MADS-boxPROSITEPS50066MADS_BOX_2coord: 1..61
score: 31.286396
IPR002487Transcription factor, K-boxPFAMPF01486K-boxcoord: 85..168
e-value: 3.6E-22
score: 78.4
IPR002487Transcription factor, K-boxPROSITEPS51297K_BOXcoord: 84..174
score: 14.069221
IPR036879Transcription factor, MADS-box superfamilyGENE3D3.40.1810.10coord: 14..93
e-value: 1.2E-29
score: 104.2
IPR036879Transcription factor, MADS-box superfamilySUPERFAMILY55455SRF-likecoord: 3..84
IPR033896MADS MEF2-likeCDDcd00265MADS_MEF2_likecoord: 3..71
e-value: 4.44609E-44
score: 140.38

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh02G014940.1CmaCh02G014940.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045944 positive regulation of transcription by RNA polymerase II
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function GO:0003677 DNA binding