CmaCh02G014550 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh02G014550
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Tubulin beta chain
Location	Cma_Chr02: 8368083 .. 8370322 (+)
RNA-Seq Expression	CmaCh02G014550
Synteny	CmaCh02G014550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAAGACAGAAGAAGTAGCAGTCTCCTGGTTGTTGTCAGCTTCCTTGTCATCCAGCTCACACAACTCCAATCTGGAATTTGACAGGTCTCTCTTCATTCATACATTCCCACATGAAATTATTAATTCAATCTTCTTCCATGTCTTAAAACCTTCACTTTCACTATCCTTTCACGCCATTTCCCCCTCAACATAAAGACTAGAAACTCTATTTCATTTCATCCTAAAACCCCCCCTTATATATCCCTCCCTCCATCTGCCTGCAAACCCTCAAACCATCTGCCACTTCCTTCTTGCTTTCCTCTGTTTTCGAAAATGAGAGAAATCCTCCATCTTCAAGCAGGACAGTGTGGAAACCAAATCGGGGCTAAGTTTTGGGAAGTTGTTTGTGATGAACACGGCATAGATCCCACTGGAAACTACACCGGAACTAGTAACCTTCAACTCGAAAGAGTTAATGTTTACTACAACGAAGCGAGCGGCGGCCGATACGTTCCGAGGGCTGTTTTGGTTGATCTTGAACCAGGAACCATGGACAGCCTCAGAACAGGTCCTTACGGGAATATATTCAGGCCTGATAACTTTGTTTTTGGGCAAAATGGAGCTGGAAACAACTGGGCTAAAGGCCATTACACCGAAGGTGCTGAATTAGTTGATTCTGTTCTTGATGTGGTCAGAAAAGAAGCTGAGAATTGTGACTGTTTACAAGGTATGAATATGAGATGACTATGAGATCTGTTCTTCCCATATTCAATCCATAAGATGTTATTTCTACTCTAATAAATATTGATAGTAATCAAAATCCTGATCTTGGTTTGAATCTATATTTGTGTGGAACAGGGTTTCAAGTTTGCCATTCTCTTGGAGGAGGGACTGGATCTGGAATGGGAACCCTACTGATATCAAAGATCAGGGAAGAGTATCCTGACAGGATGATGTTAACTTTCTCTGTGTTCCCTTCACCTAAGGTCTCAGATACAGTGGTTGAGCCCTATAATGCCACTCTCTCTGTGCACCAGTTGGTGGAGAATGCTGATGAGTGCATGGTTTTGGATAATGAAGCACTCTATGATATCTGCTTTAGAACCCTCAAGCTCACCAATCCCAGCTGTAAGTTTCTCTCCCAATATCACATGTTGTAGCAATCAATATACTTGAGATGCAATAGCTCTCTTATTTCGATTTTTCTGTGTTTTAGTTGGTGATCTCAACCACTTGATTTCTACAACCATGAGTGGAGTTACATGCTGCCTTCGCTTCCCCGGCCAGCTCAATTCCGACCTCCGAAAGCTAGCTGTGAACCTCATCCCTTTCCCACGACTCCACTTCTTCATGGTTGGTTTTGCACCCTTGACTGCTCGTGGCTCGCAGCAGTACCGTGCACTCACCATCCCTGAGCTCACACAGCAAATGTGGGATGCCAAAAACATGATGTGTGCTGCTGATCCTCGCCATGGTCGATACCTAACTGCCTCAGCTTTGTTCCGTGGCAAGATGAGTACCAAGGAAGTTGACGAACAGATGATAAATGTACAGAACAAGAACTCATCCTACTTTGTTGAGTGGATTCCAAACAATGTTAAGTCAAGTGTTTGTGACATTCCACCAACTGGGTTGTCGATGTCTTCGACATTCATGGGAAACTCAACCTCAATACAAGAGATGTTTCGACGAGTCTCCGAACAATTCACGGTCATGTTCAGGAGGAAGGCGTTTTTGCATTGGTACACAGGGGAGGGAATGGATGAGATGGAGTTTACAGAGGCTGAGAGTAATATGAATGATTTGGTATCAGAGTACCAGCAGTATCAAGATGCTGTAGCAGAGGATGAGGAGGAAGATGATATGCTGGAGCACGAATAAGAGTGGAATTGAAGATGTGTCCTGCTAAATTTCTGTCTCAGTCGCTAAGTATATGGGCTTTGGGGTGAATAAGTTCTTGTTTGATGATGTGAGTTTTGGTGTATTGATGTGCTAAATTTGTTGTTGCGTTAAATTATTGATATATGGCATGAGTTCTGCAAGTATGATGAAAATTTAAATGAAAAAGTTTGATATTTCTTGCTGTAAACTGTCTATGTAGAGTAGACAGCTTCCGAGATGCATTCCTACTAGAAGAGTTTCTTACCTCAATCTGTAATAACACAAACCCACCACTAGCAAATATTGTGTCATATTTTGCCTGAAATGCGTCTGCAAGGGAAAAGTTTCAACACCCTTATAAAGAATGTTTCGTTCTCC

mRNA sequence

ATAAAGACAGAAGAAGTAGCAGTCTCCTGGTTGTTGTCAGCTTCCTTGTCATCCAGCTCACACAACTCCAATCTGGAATTTGACAGGTCTCTCTTCATTCATACATTCCCACATGAAATTATTAATTCAATCTTCTTCCATGTCTTAAAACCTTCACTTTCACTATCCTTTCACGCCATTTCCCCCTCAACATAAAGACTAGAAACTCTATTTCATTTCATCCTAAAACCCCCCCTTATATATCCCTCCCTCCATCTGCCTGCAAACCCTCAAACCATCTGCCACTTCCTTCTTGCTTTCCTCTGTTTTCGAAAATGAGAGAAATCCTCCATCTTCAAGCAGGACAGTGTGGAAACCAAATCGGGGCTAAGTTTTGGGAAGTTGTTTGTGATGAACACGGCATAGATCCCACTGGAAACTACACCGGAACTAGTAACCTTCAACTCGAAAGAGTTAATGTTTACTACAACGAAGCGAGCGGCGGCCGATACGTTCCGAGGGCTGTTTTGGTTGATCTTGAACCAGGAACCATGGACAGCCTCAGAACAGGTCCTTACGGGAATATATTCAGGCCTGATAACTTTGTTTTTGGGCAAAATGGAGCTGGAAACAACTGGGCTAAAGGCCATTACACCGAAGGTGCTGAATTAGTTGATTCTGTTCTTGATGTGGTCAGAAAAGAAGCTGAGAATTGTGACTGTTTACAAGGGTTTCAAGTTTGCCATTCTCTTGGAGGAGGGACTGGATCTGGAATGGGAACCCTACTGATATCAAAGATCAGGGAAGAGTATCCTGACAGGATGATGTTAACTTTCTCTGTGTTCCCTTCACCTAAGGTCTCAGATACAGTGGTTGAGCCCTATAATGCCACTCTCTCTGTGCACCAGTTGGTGGAGAATGCTGATGAGTGCATGGTTTTGGATAATGAAGCACTCTATGATATCTGCTTTAGAACCCTCAAGCTCACCAATCCCAGCTTTGGTGATCTCAACCACTTGATTTCTACAACCATGAGTGGAGTTACATGCTGCCTTCGCTTCCCCGGCCAGCTCAATTCCGACCTCCGAAAGCTAGCTGTGAACCTCATCCCTTTCCCACGACTCCACTTCTTCATGGTTGGTTTTGCACCCTTGACTGCTCGTGGCTCGCAGCAGTACCGTGCACTCACCATCCCTGAGCTCACACAGCAAATGTGGGATGCCAAAAACATGATGTGTGCTGCTGATCCTCGCCATGGTCGATACCTAACTGCCTCAGCTTTGTTCCGTGGCAAGATGAGTACCAAGGAAGTTGACGAACAGATGATAAATGTACAGAACAAGAACTCATCCTACTTTGTTGAGTGGATTCCAAACAATGTTAAGTCAAGTGTTTGTGACATTCCACCAACTGGGTTGTCGATGTCTTCGACATTCATGGGAAACTCAACCTCAATACAAGAGATGTTTCGACGAGTCTCCGAACAATTCACGGTCATGTTCAGGAGGAAGGCGTTTTTGCATTGGTACACAGGGGAGGGAATGGATGAGATGGAGTTTACAGAGGCTGAGAGTAATATGAATGATTTGGTATCAGAGTACCAGCAGTATCAAGATGCTGTAGCAGAGGATGAGGAGGAAGATGATATGCTGGAGCACGAATAAGAGTGGAATTGAAGATGTGTCCTGCTAAATTTCTGTCTCAGTCGCTAAGTATATGGGCTTTGGGGTGAATAAGTTCTTGTTTGATGATGTGAGTTTTGGTGTATTGATGTGCTAAATTTGTTGTTGCGTTAAATTATTGATATATGGCATGAGTTCTGCAAGTATGATGAAAATTTAAATGAAAAAGTTTGATATTTCTTGCTGTAAACTGTCTATGTAGAGTAGACAGCTTCCGAGATGCATTCCTACTAGAAGAGTTTCTTACCTCAATCTGTAATAACACAAACCCACCACTAGCAAATATTGTGTCATATTTTGCCTGAAATGCGTCTGCAAGGGAAAAGTTTCAACACCCTTATAAAGAATGTTTCGTTCTCC

Coding sequence (CDS)

ATGAGAGAAATCCTCCATCTTCAAGCAGGACAGTGTGGAAACCAAATCGGGGCTAAGTTTTGGGAAGTTGTTTGTGATGAACACGGCATAGATCCCACTGGAAACTACACCGGAACTAGTAACCTTCAACTCGAAAGAGTTAATGTTTACTACAACGAAGCGAGCGGCGGCCGATACGTTCCGAGGGCTGTTTTGGTTGATCTTGAACCAGGAACCATGGACAGCCTCAGAACAGGTCCTTACGGGAATATATTCAGGCCTGATAACTTTGTTTTTGGGCAAAATGGAGCTGGAAACAACTGGGCTAAAGGCCATTACACCGAAGGTGCTGAATTAGTTGATTCTGTTCTTGATGTGGTCAGAAAAGAAGCTGAGAATTGTGACTGTTTACAAGGGTTTCAAGTTTGCCATTCTCTTGGAGGAGGGACTGGATCTGGAATGGGAACCCTACTGATATCAAAGATCAGGGAAGAGTATCCTGACAGGATGATGTTAACTTTCTCTGTGTTCCCTTCACCTAAGGTCTCAGATACAGTGGTTGAGCCCTATAATGCCACTCTCTCTGTGCACCAGTTGGTGGAGAATGCTGATGAGTGCATGGTTTTGGATAATGAAGCACTCTATGATATCTGCTTTAGAACCCTCAAGCTCACCAATCCCAGCTTTGGTGATCTCAACCACTTGATTTCTACAACCATGAGTGGAGTTACATGCTGCCTTCGCTTCCCCGGCCAGCTCAATTCCGACCTCCGAAAGCTAGCTGTGAACCTCATCCCTTTCCCACGACTCCACTTCTTCATGGTTGGTTTTGCACCCTTGACTGCTCGTGGCTCGCAGCAGTACCGTGCACTCACCATCCCTGAGCTCACACAGCAAATGTGGGATGCCAAAAACATGATGTGTGCTGCTGATCCTCGCCATGGTCGATACCTAACTGCCTCAGCTTTGTTCCGTGGCAAGATGAGTACCAAGGAAGTTGACGAACAGATGATAAATGTACAGAACAAGAACTCATCCTACTTTGTTGAGTGGATTCCAAACAATGTTAAGTCAAGTGTTTGTGACATTCCACCAACTGGGTTGTCGATGTCTTCGACATTCATGGGAAACTCAACCTCAATACAAGAGATGTTTCGACGAGTCTCCGAACAATTCACGGTCATGTTCAGGAGGAAGGCGTTTTTGCATTGGTACACAGGGGAGGGAATGGATGAGATGGAGTTTACAGAGGCTGAGAGTAATATGAATGATTTGGTATCAGAGTACCAGCAGTATCAAGATGCTGTAGCAGAGGATGAGGAGGAAGATGATATGCTGGAGCACGAATAA

Protein sequence

MREILHLQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGTSNLQLERVNVYYNEASGGRYVPRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMMCAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTGLSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAVAEDEEEDDMLEHE

Homology

[Close]

BLAST of CmaCh02G014550 vs. ExPASy Swiss-Prot
Match: P93176 (Tubulin beta chain OS=Hordeum vulgare OX=4513 GN=TUBB PE=2 SV=1)

HSP 1 Score: 860.1 bits (2221), Expect = 1.1e-248
Identity = 412/435 (94.71%), Postives = 426/435 (97.93%), Query Frame = 0


Query: 1   MREILHLQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGTSNLQLERVNVYYNEASGGRYV 60
           MREILH+Q GQCGNQIGAKFWEVVCDEHGIDPTG YTGTS+LQLERVNVYYNEAS GR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVL+DLEPGTMDS+RTGPYG IFRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT PSFGDLNHLIS TMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT+RGSQQYRALT+PELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360
           CAADPRHGRYLTASA+FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360

Query: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSM+STF+GNSTSIQEMFRRVSEQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDAVAEDEEE 436
           EYQQYQDA A++E E
Sbjct: 421 EYQQYQDATADEEGE 435

[Close]

BLAST of CmaCh02G014550 vs. ExPASy Swiss-Prot
Match: Q9ZRB1 (Tubulin beta-2 chain OS=Triticum aestivum OX=4565 GN=TUBB2 PE=2 SV=1)

HSP 1 Score: 858.2 bits (2216), Expect = 4.1e-248
Identity = 411/435 (94.48%), Postives = 426/435 (97.93%), Query Frame = 0


Query: 1   MREILHLQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGTSNLQLERVNVYYNEASGGRYV 60
           MREILH+Q GQCGNQIGAKFWEVVCDEHGIDPTG YTGTS+LQLERVNVYYNEAS GR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVL+DLEPGTMDS+RTGPYG IFRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT PSFGDLNHLIS TMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT+RGSQQYRALT+PELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360
           CAADPRHGRYLTASA+FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360

Query: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSM+STF+GNSTSIQEMFRRVSEQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFVGNSTSIQEMFRRVSEQFTSMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDAVAEDEEE 436
           EYQQYQDA +++E E
Sbjct: 421 EYQQYQDATSDEEGE 435

[Close]

BLAST of CmaCh02G014550 vs. ExPASy Swiss-Prot
Match: Q41783 (Tubulin beta-6 chain OS=Zea mays OX=4577 GN=TUBB6 PE=2 SV=1)

HSP 1 Score: 858.2 bits (2216), Expect = 4.1e-248
Identity = 411/437 (94.05%), Postives = 426/437 (97.48%), Query Frame = 0


Query: 1   MREILHLQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGTSNLQLERVNVYYNEASGGRYV 60
           MREILH+Q GQCGNQIGAKFWEVVCDEHGIDPTG YTG S+LQLERVNVYYNEAS GR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVL+DLEPGTMDS+RTGPYG IFRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT PSFGDLNHLIS TMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT+RGSQQYRALT+PELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360
           CAADPRHGRYLTASA+FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360

Query: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSM+STF+GNSTSIQEMFRRVSEQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDAVAEDEEEDD 438
           EYQQYQDA A++EE +D
Sbjct: 421 EYQQYQDATADEEEYED 437

[Close]

BLAST of CmaCh02G014550 vs. ExPASy Swiss-Prot
Match: Q9ZPN9 (Tubulin beta-2 chain OS=Eleusine indica OX=29674 GN=TUBB2 PE=2 SV=1)

HSP 1 Score: 857.1 bits (2213), Expect = 9.0e-248
Identity = 414/441 (93.88%), Postives = 428/441 (97.05%), Query Frame = 0


Query: 1   MREILHLQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGTSNLQLERVNVYYNEASGGRYV 60
           MREILH+Q GQCGNQIGAKFWEVVCDEHGIDPTG YTGTS+LQLERVNVYYNEAS GR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVL+DLEPGTMDS+RTGPYG IFRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT PSFGDLNHLIS TMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT+RGSQQYRALT+PELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360
           CAADPRHGRYLTASA+FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360

Query: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSM+STF+GNSTSIQEMFRRVSEQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDAVA-EDEEEDDMLE 441
           EYQQYQDA A ED E +D L+
Sbjct: 421 EYQQYQDATADEDGEYEDELD 441

[Close]

BLAST of CmaCh02G014550 vs. ExPASy Swiss-Prot
Match: P45960 (Tubulin beta-4 chain OS=Oryza sativa subsp. japonica OX=39947 GN=TUBB4 PE=2 SV=1)

HSP 1 Score: 855.9 bits (2210), Expect = 2.0e-247
Identity = 410/435 (94.25%), Postives = 424/435 (97.47%), Query Frame = 0


Query: 1   MREILHLQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGTSNLQLERVNVYYNEASGGRYV 60
           MREILH+Q GQCGNQIGAKFWEVVCDEHGIDPTG YTG S+LQLERVNVYYNEAS GR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVL+DLEPGTMDS+RTGPYG IFRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT PSFGDLNHLIS TMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT+RGSQQYRALT+PELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360
           CAADPRHGRYLTASA+FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360

Query: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSM+STF+GNSTSIQEMFRRVSEQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDAVAEDEEE 436
           EYQQYQDA A++E E
Sbjct: 421 EYQQYQDATADEEGE 435

[Close]

BLAST of CmaCh02G014550 vs. TAIR 10
Match: AT5G12250.1 (beta-6 tubulin )

HSP 1 Score: 853.2 bits (2203), Expect = 9.3e-248
Identity = 410/449 (91.31%), Postives = 430/449 (95.77%), Query Frame = 0


Query: 1   MREILHLQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGTSNLQLERVNVYYNEASGGRYV 60
           MREILH+Q GQCGNQIG+KFWEVVCDEHGIDPTG Y G S+LQLERVNVYYNEAS GRYV
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRA+L+DLEPGTMDS+RTGPYG IFRPDNFVFGQ+GAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 61  PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT PSFGDLNHLIS TMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT+RGSQQYRALT+PELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360
           CAADPRHGRYLTASA+FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDI P G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPRG 360

Query: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSM+STF+GNSTSIQEMFRRVSEQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDAVA-------EDEEEDDMLEHE 443
           EYQQYQDA A       EDE+E+++L+HE
Sbjct: 421 EYQQYQDATADDEGEYEEDEDEEEILDHE 449

[Close]

BLAST of CmaCh02G014550 vs. TAIR 10
Match: AT5G62690.1 (tubulin beta chain 2 )

HSP 1 Score: 845.1 bits (2182), Expect = 2.5e-245
Identity = 407/448 (90.85%), Postives = 426/448 (95.09%), Query Frame = 0


Query: 1   MREILHLQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGTSNLQLERVNVYYNEASGGRYV 60
           MREILH+Q GQCGNQIGAKFWEVVC EHGIDPTG YTG S+LQLER+NVYYNEAS GR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVL+DLEPGTMDSLR+GPYG  FRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT PSFGDLNHLIS TMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT+RGSQQYR+LT+PELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360
           CAADPRHGRYLTASA+FRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKS+VCDIPPTG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTG 360

Query: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           L M+STF+GNSTSIQEMFRRVSEQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDAVA------EDEEEDDMLEHE 443
           EYQQYQDA A      EDEEE +  + E
Sbjct: 421 EYQQYQDATADEEGDYEDEEEGEYQQEE 448

[Close]

BLAST of CmaCh02G014550 vs. TAIR 10
Match: AT5G62700.1 (tubulin beta chain 3 )

HSP 1 Score: 845.1 bits (2182), Expect = 2.5e-245
Identity = 407/448 (90.85%), Postives = 426/448 (95.09%), Query Frame = 0


Query: 1   MREILHLQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGTSNLQLERVNVYYNEASGGRYV 60
           MREILH+Q GQCGNQIGAKFWEVVC EHGIDPTG YTG S+LQLER+NVYYNEAS GR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVL+DLEPGTMDSLR+GPYG  FRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT PSFGDLNHLIS TMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT+RGSQQYR+LT+PELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360
           CAADPRHGRYLTASA+FRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKS+VCDIPPTG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTG 360

Query: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           L M+STF+GNSTSIQEMFRRVSEQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDAVA------EDEEEDDMLEHE 443
           EYQQYQDA A      EDEEE +  + E
Sbjct: 421 EYQQYQDATADEEGDYEDEEEGEYQQEE 448

[Close]

BLAST of CmaCh02G014550 vs. TAIR 10
Match: AT5G23860.1 (tubulin beta 8 )

HSP 1 Score: 843.6 bits (2178), Expect = 7.3e-245
Identity = 406/442 (91.86%), Postives = 424/442 (95.93%), Query Frame = 0


Query: 1   MREILHLQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGTSNLQLERVNVYYNEASGGRYV 60
           MREILH+Q GQCGNQIGAKFWEVVC EHGID TG Y G ++LQLERVNVYYNEAS GR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVL+DLEPGTMDS+R+GPYG IFRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT PSFGDLNHLIS TMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT+RGSQQYRALT+PELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360
           CAADPRHGRYLTASA+FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKS+VCDIPPTG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTG 360

Query: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           L M+STF+GNSTSIQEMFRRVSEQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDAVAEDEEEDDMLEHE 443
           EYQQYQDA A++EE  +  E E
Sbjct: 421 EYQQYQDATADEEEGYEYEEDE 442

[Close]

BLAST of CmaCh02G014550 vs. TAIR 10
Match: AT5G23860.2 (tubulin beta 8 )

HSP 1 Score: 843.6 bits (2178), Expect = 7.3e-245
Identity = 406/442 (91.86%), Postives = 424/442 (95.93%), Query Frame = 0


Query: 1   MREILHLQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGTSNLQLERVNVYYNEASGGRYV 60
           MREILH+Q GQCGNQIGAKFWEVVC EHGID TG Y G ++LQLERVNVYYNEAS GR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVL+DLEPGTMDS+R+GPYG IFRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT PSFGDLNHLIS TMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQQMWDAKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT+RGSQQYRALT+PELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASALFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTG 360
           CAADPRHGRYLTASA+FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKS+VCDIPPTG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTG 360

Query: 361 LSMSSTFMGNSTSIQEMFRRVSEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           L M+STF+GNSTSIQEMFRRVSEQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDAVAEDEEEDDMLEHE 443
           EYQQYQDA A++EE  +  E E
Sbjct: 421 EYQQYQDATADEEEGYEYEEDE 442

The following BLAST results are available for this feature:

BLAST of CmaCh02G014550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93176	1.1e-248	94.71	Tubulin beta chain OS=Hordeum vulgare OX=4513 GN=TUBB PE=2 SV=1	[more]
Q9ZRB1	4.1e-248	94.48	Tubulin beta-2 chain OS=Triticum aestivum OX=4565 GN=TUBB2 PE=2 SV=1	[more]
Q41783	4.1e-248	94.05	Tubulin beta-6 chain OS=Zea mays OX=4577 GN=TUBB6 PE=2 SV=1	[more]
Q9ZPN9	9.0e-248	93.88	Tubulin beta-2 chain OS=Eleusine indica OX=29674 GN=TUBB2 PE=2 SV=1	[more]
P45960	2.0e-247	94.25	Tubulin beta-4 chain OS=Oryza sativa subsp. japonica OX=39947 GN=TUBB4 PE=2 SV=1	[more]

BLAST of CmaCh02G014550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12250.1	9.3e-248	91.31	beta-6 tubulin	[more]
AT5G62690.1	2.5e-245	90.85	tubulin beta chain 2	[more]
AT5G62700.1	2.5e-245	90.85	tubulin beta chain 3	[more]
AT5G23860.1	7.3e-245	91.86	tubulin beta 8	[more]
AT5G23860.2	7.3e-245	91.86	tubulin beta 8	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 408..442
None	No IPR available	PANTHER	PTHR11588:SF396	TUBULIN BETA CHAIN	coord: 1..438
None	No IPR available	CDD	cd02187	beta_tubulin	coord: 2..426 e-value: 0.0 score: 875.74
IPR000217	Tubulin	PRINTS	PR01161	TUBULIN	coord: 10..30 score: 72.97 coord: 190..210 score: 67.82 coord: 132..150 score: 79.04 coord: 370..398 score: 63.78 coord: 51..70 score: 69.96 coord: 93..104 score: 72.69 coord: 106..130 score: 70.76 coord: 151..172 score: 59.63 coord: 176..189 score: 79.11
IPR000217	Tubulin	PANTHER	PTHR11588	TUBULIN	coord: 1..438
IPR002453	Beta tubulin	PRINTS	PR01163	BETATUBULIN	coord: 265..281 score: 82.86 coord: 329..343 score: 87.09 coord: 311..329 score: 78.83 coord: 347..370 score: 73.48 coord: 88..99 score: 87.95 coord: 230..239 score: 75.09 coord: 108..126 score: 88.12 coord: 377..388 score: 71.71 coord: 152..164 score: 91.43 coord: 41..58 score: 74.79 coord: 412..430 score: 89.23 coord: 245..258 score: 88.61 coord: 212..224 score: 77.71
IPR003008	Tubulin/FtsZ, GTPase domain	SMART	SM00864	Tubulin_4	coord: 47..244 e-value: 2.5E-69 score: 246.3
IPR003008	Tubulin/FtsZ, GTPase domain	PFAM	PF00091	Tubulin	coord: 3..211 e-value: 2.0E-69 score: 233.8
IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	SMART	SM00865	Tubulin_C_4	coord: 246..383 e-value: 5.5E-40 score: 148.8
IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	PFAM	PF03953	Tubulin_C	coord: 261..382 e-value: 1.6E-38 score: 131.7
IPR037103	Tubulin/FtsZ-like, C-terminal domain	GENE3D	3.30.1330.20		coord: 263..373 e-value: 1.3E-40 score: 140.1
IPR036525	Tubulin/FtsZ, GTPase domain superfamily	GENE3D	3.40.50.1440	Tubulin/FtsZ, GTPase domain	coord: 1..262 e-value: 1.7E-131 score: 439.5
IPR036525	Tubulin/FtsZ, GTPase domain superfamily	SUPERFAMILY	52490	Tubulin nucleotide-binding domain-like	coord: 1..243
IPR023123	Tubulin, C-terminal	GENE3D	1.10.287.600	Helix hairpin bin	coord: 374..429 e-value: 4.6E-34 score: 118.0
IPR013838	Beta tubulin, autoregulation binding site	PROSITE	PS00228	TUBULIN_B_AUTOREG	coord: 1..4
IPR017975	Tubulin, conserved site	PROSITE	PS00227	TUBULIN	coord: 140..146
IPR008280	Tubulin/FtsZ, C-terminal	SUPERFAMILY	55307	Tubulin C-terminal domain-like	coord: 244..428

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G014550.1	CmaCh02G014550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000226	microtubule cytoskeleton organization
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005874	microtubule
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0005200	structural constituent of cytoskeleton