Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAATAGGGTTGCAAAACCAAAGAAAATGGGGTATTAAATGGGAATTAGAATTAGGAGGCGAATTGGGTAATTTCAGTTGGGAGTCGCCCTCCAAAAAGGACTCGTGGAGGCTGGGTCTGTGCGCTGCGTGGAAGACAGGTGACACGGCAATGACCGCAACAATGAATAGAGCTTCTCCCTTCTTGTTTATGGAGGATCTTCAACTTCAACCCTCGCCTCAATCCTACTTCTTCTACCTTTTGATTTCCAACACACTTCTGAGATCTGTCTGATTATCGATTTCAGGTTCACGATCCACATTGCATCTGTTCTTCATTCTCTATCGTTCTTGTTCGTGTTTTGATTTGAATTGTGTTTTTCGTGGTGTATTCCGCCCGTTGTAGGACAATGCTCAATGTCGTGGTTGTCTGTTCATCTTTTGAATTATTAGGTTCAGTCAGTCGCTTCGCTTAATAATCTCATTTGACTCTCCTCTCCCTTCTAGTATGGTTTTTTGTTTTGAGTTTTTGGTTGATGTGTAGATAATTGGCTTGGCTTCTACGTACATGGCGGACGTCGCTAAGGTGTTGTATGTTGTGATTTTGGATCATGAAGAACAAGAAAAGGAGGAGAAGGAGTCGTTCCGGTATACTCGCCCCGTTTTGCAAAGCACTCTGCAGCTTATGGGTTGCAAAGCACGACATGCTTTCAAGGTGCTTCATCTTTAATGCCTTTTTTTCTCTACATCTTCTCAATTTAAGATTTTTTGCGTTATATTGCCGACTGGTTTTCGTTTTCCTTCGCCATTGCGTTCTTTCTTGGTAGAGCGGAGGCGTATGGTCAAATATTTCCGTATCTGAATTCTAGTTGTGGATGTTGGATCTGCATCTCCCTTGAGTTCTTTTCTTTTCTTTTCTTTTCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATATTGTGACATGCATATCTATTTCCTTCTTTTTGCTTTTATTATTTTTTTCAAAATCTGCGAGAGCAACCTGTTTCGATTGGCTATGCATTTTTTTGTGTCATGCATTTCTATCTGGTGAAGTAGTTAATTTTGCGTTATATTTGTAGAATTTTATGAAGTATAGATTTCCGCTATCTTGTTCTTCTTCAATTATGTTTATTTCTCTCTGTCTTTCCTTTGTCCCTTGAGCTTCTTGTCCTTTTGTATGCTTTAATTGTGAATTACCGTTTCTATTTCGTACTCAATTGCCGCTGCTGGGTTTTGAACTTCACATACCGGTCTTTTTCAATGTCTTGACCATTCTCAAAAATGGTCTATTTTCGATCTCCTATTCCAATTCTCTCTTGCATGTACAAGTGCATTGTCATCATGTGGCGTACAAGTTTATGCTTTTTTGTTTGGGAGCTTGGATGTTTACCATTATGCATAGATGAACCTGAGTAATTATGTGGCGTTCTAAGTTGTTTTAATCTCGTCCATCCTCTTCTATCAATGCAATTTGTTTGCTCCAAATAAACTGATGGATATTTTAACATTTTTTGAACTGATGAGTGTGATGGAGAACATACGATGCCTTGTATACAATTTTATGTGGTCGACTTTCCAGCTTCATCCAAGATTTACAAATTCGAGAGAGATGTGTTGTGAGTTGGGAGCCGCAAGTTATCATAATTTTTACTCCTACTTTCATGAAATTCTCGGTGGAAAAATAATAGTTAAAAATAACGTGTACTTCTGTTATTGGTAACACATCAAACAATGAATTCGATTCATTATTTAAATTTTAATTCCAAGCATTGTAAACTCCAGATTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGATTACATGATTAGATAAGCCAAAGGGCTTTTGAGTTGATGCGGAAAGGTCATGGTGTGCTTCCTGAAGGGTCTGGGACAAGATTTTCTGAAAAAGAATGTGTTAATAATTGGGATGTGCGTTTTGCTGAAACTGAGGTTTGGAAACCTCTGAAATCATGTAAAGATGGTGAAAATAAAAACATTCCGTTTGAGCTATATAAAAGGCGCACAACTCTGATTGTAAGAAGAGCAAACTTCTTAGATGTTGTATGCAAAGCGCTGGCAGAATACAAGTATGTGAGTCCCAACCAGAGGGCTGACTTGCTTTTAGCATGCAGGTAAACTCATAAATGATGCGAGTCTTTGAATAGAGTCCCCATTATGTTTAACTGTTTTTCTTATTTGCTTTAAACCTACTTTTGTTTTTTCCACAACTTTGTACTTCTGTGGTTTAGTCATGTGCAGTTTAACTTCAAGTTGCCTTTTACAAGGATGATTTTTGGGATAATCTTCATGCCAGAAAGTTTTTATGTTGATCTGAGTATTGTTAGATTTACACCTTGTCTATCTGATGCAAGTAGTCGGCGTATTTGACACTTGAAATATTTAAAGTACTTTATCTTATGCAATATTTTTCACCTTGGTATCTATAATACCACTTCAAATGGTTGCTTCAAAATGTATTCTAAGGATGCCATCTTAGTTAAAAGAACTGTTCACGACCTTATATTGTATTAATAGGTCATTTATCCTGTCCTGCTTGTTTTGTGCTCCCCTAGGTTCTAAATGAACCCCAGTAACTAGTACAGCTGGTCTATCTTGTGGGAGGTTTGAGGAGAGAAATTTATGGGAAATTTGAGGGAGAGAAAGCAGTATTTTCTACCTTTGAAAAGAGACTGCTGGTGCTGTTTGTAATCTTGTAGAATTCTCGGTTCCTTATTCGGTCGTTTTCTCTGATCTGAATCAAAATACGAACACTTGTGACAATTCATAGGTTTCATGGAGTAAATTTTGTGTCTTTTGTTATTGCTTGGGAGATGGGTAGTCTTGCTAATTCATTATATTTGTTTCTGTTTGGGTTTATTATTGCTTATTTTCTTTGGATCTTTGAATAAGATTTGGGGCTGCCTGCAAGTTTGTTAAGCACTATTATTATATTTTTTTTCTCTGTGATGCTTGTATAGCTGATTTGTATTTCTTCGTAACAATAATTTCTTGTCACAGAATCCGAGAAAGGAAGGAATCTGTAACTGTATTATTATGTGGTACTAGTGGCTGCGGCAAATCTACCTTGTCTGCCCTGCTGGTATGTCCTTGCAGGCACCTTAATCTTTAGTGACCAAAATGTGTTGCATTATTCAGAGGCTTTTACAGTTGTTTTTGCCAACAGTTAACTGCAATGAATGACGTAGAGTTGTAGTTGAAGGTATGTTTTGGTTAAGAATGTTTTAACTTGGGTATACTGCATTTTCTCTCTGACAGGGTAGCAGGTTAGGCATTACGACAGTAATATCAACTGACTCAATTCGGCACATGATGAGGAGTTTTGTAGATGAGAAACAAAATCCTCTGCTCTGGGCTTCAACTTACCATGCTGGGGAGTATTTGGATCCAGTAGCTGTTGCTGAGGCTAAGGCGAAAAGAAAAGCAAAAAAGTTGGCAGGAAATACTCATTCATATCTGAAGGATGAAGTACTGGAGAGTTCATCCATTGGAAGACTTGATGGCCAACCATCAGACCGTTGCACTGAGCTCATCAGTCAAAAGCAGATGGCTGTTGAAGGATACAAGGCACAGAGTGAGATGGTGATCGACAGTCTTGATAGGCTGATTACTGCATGGGAAGAGCGGAAAGAATCAGTTGTTGTTGAGGGGGTTCACTTAAGCCTAAACTTTGTGGTGTGTAATCTAAGTAGTCTTTTCTTCCCTATCTATGTAGATTTTATATTCTTCTTGACATATATTTTGATGCTGCTTTTGCAGATGGGGCTTATGAAGAAGCATCCATCAATTGTACCATTCATGATTTACATCACCAATGAAGACAAACACTTGGAAAGATTTGCAGTGAGAGCAAAATATATGACACTTGACCCAGCTAAGAACAAATATGTGAAGTATATACGTAATATTAGGACAATTCAAGAATATTTATGCAAGAGGGCTGATAAGCATCTTATCCCTAAAATAAACAATACCAATGTTGACAAGAGTGTAGCTGCTATCCATGCAACAGTATTTAGCTGCCTTCGCAGGCGTGAATCTGGCGAACAGCTATATGATCCTGTGCGGAATACTGTTCCTGTTATTGACGAGGAATACAGGAACCAGTGTGCTGCCAACTCATTGAGCTCCAAGTGCATGTTCCAACTCATCCAGAGGAAAGGTTCCTCTAGGAATCTGATGGCTATGGTTAATACTGATGGATCTGTGGCTAAGGCATGGCCTGTTGATACAATTGGTGATACAAATGGGAAGCGTTTATTAGACCCGAGGGCTGAGAATGGAGTGGGGATTCCAATGTATGGTCCATTGCAGATTGATAAAGCTGAACCTGTTAATCTTCAATTTGGTTTCTATGGCATCAGTGCTTGGCCCACTGATGCTGGTGGGACTAGCCGTGCAGGGAGTGTTGATGAATCCAGGGCGGATGGGACTGATACTAGTAAATACCTTTCTTCTTGCTGCAGCTCTCCAAGGTTTTCCGATGGACCTTCCAAGGAGGTAGTTTTGGAAATGATTTTAATTTTCTGAAAAACTCGTTAGGTAATTTTTTATTTTGTTTAGAAGTGCATTTCCTCTCAAGTCTTTTTCTTCCCAACGCACAGTACACAGTAGTTGTGGAAATTTAAAAGCTAACATTCAAGCCGTATATGTGCTCTGTATATTTCCTTTAATTTTATTTTCTTCCCATCATATCTCTTTGGTGGTAGTCGGTAGAATGCCAATTTCTGCTTAGATTTGATGGTCCATTATTCCTTTCAGCTTAAGGAAGATATCTCAGTGCATGGGAGTGATGAAGAGGCTGATGATCCTCAAGAGCTTGGCAGCGATGAAGACTTTAGTGAAGATGGTGACATTGAGATTCACGAGGAGGTATTGTCTAGTTCTGCGTACAAGAAATATTGTTAAATATGCTTCAAAGCAGTCCTCTGCACTGATTTGAGTTATCCAAGGGGACTGTTCTTGCTTCATGAGTATTCAATATAATTTGTTTAACAATGTCATGCACTTTATACCTTGTTTTGGCATCGGTTTGTATTTATCAATGTTGGTTAGTATTCTGCTTCATACTTCAGAAGAATTCCTGCAAGGATCATTATGGATTACTGAAAGATCTGAATTTGAAAATTTTACGTGAGTATTTTATTCTTTTGGCCCACAGGAAGGCTCTGTTGATGAAGAGTCGACAAAATCAGATGAAGAATATGATGATCTGGCAATGCTGGACATGAACGATGGATCCTGGTCGGGTGGTGATGACATGGAGTATATGGAAAAGGCTGGATCTGTTTCTAAGGGGCAAACGAGTGCTCGGGCAGTTGATAAGTATCGCCAGAACCTAGACCACTTCCTGCTCTCTAAAAGTGAGTCATCTAATTCACTCTGCTTATATTCTTCTCATGTGAAGGAGAAAGAAAGGAATGTACGAACTTCTGGTTCTTTGAAAATGAAAAAACGTTCCCTTAGCATTCCAGCCGTGAGAAAGCAAGGTTCAGCCATCGATGGTCCCATACTATCTGGAGCTCCACAGGTGTAGCTCAAGAATTTTGCATAGCTTTTAGTTTTTTGTTTCTTTATTGTTCTCTCAATGATCTCGTCTTTACTGGAATTAGCTTAAGACTATGCGGGTATAAACACACCGCACCCCTGGGTTTAAAAAATGTACAGAGTGGTGCTCCTTGTAATGGACTTGCTTCGTGGTGTAGCGTCCTTTTGTGTATGTATACATAATATCCAGATCTATATTAGGTAAAAATGACTATGAGGCCTACGTAAAGCATACTGCTTAAAACAAAAGGCTCATGTATATCGAAGTTACCTGGGCTGCCATTGACCTCCTTAGGACCTGTAGCTTGGTGCTTGTGGCTGCTGTGTCGGTGCATAACAACTGAGGAAGTATTGGTTAAAACCCAGATGAGTGCTCAAGAGCCAGGGACTCCCAGCTTTTAGGATCCGGAAACAGCCATCTTTCTGGCGAGAGAATTTTGGTACGACGTCCTTGCTCTGGCATCTTTTGATTCTAATTCCATTTCACATTGACATCACATTCTGGGTATCTATTATTTTTCACGTTGTTTCTTGTTCTCACCAATTGGCATTTAACGTAATCGGGTCCTGTAGTCCCACATCTTTCTCATATGTCACAACAATACAGGCAGAGGGGGTGGTCCATCTTATCTACTGAATTAAATTGCATGTTTCCACATCGGGATTAACAGTTTTGTAGGATTCGTTGGAACATATACTTTTTTTATATAGCCCAGTTGCTAAATAATTTCTCATTTGACGCATAAATTTTCTGTTTAGTTTCGAGTTGGCTCACGTCCGCCACCAGTAAGGAAATTGGTGAAGGTGCAGTAATTTTGATAATGAAACAAGGTAATACAATGAAAAAAGGTGAGCTCTAATTCGAACCCATATCTCCTTCCTTGTAGAGACCATTTGTAAGTAGTCAGTATCTATTAGAATTTGGGGCACTACTTCTCTCAGTCATTTCGTCGAACAATAAACATGCACTTCGGATCGTCCC
mRNA sequence
ATGGGAATAGGGTTGCAAAACCAAAGAAAATGGGGTATTAAATGGGAATTAGAATTAGGAGGCGAATTGGGTAATTTCAGTTGGGAGTCGCCCTCCAAAAAGGACTCGTGGAGGCTGGGTCTGTGCGCTGCGTGGAAGACAGGTGACACGGCAATGACCGCAACAATGAATAGAGCTTCTCCCTTCTTGTTTATGGAGGATCTTCAACTTCAACCCTCGCCTCAATCCTACTTCTTCTACCTTTTGATTTCCAACACACTTCTGAGATCTATAATTGGCTTGGCTTCTACGTACATGGCGGACGTCGCTAAGGTGTTGTATGTTGTGATTTTGGATCATGAAGAACAAGAAAAGGAGGAGAAGGAGTCGTTCCGGTATACTCGCCCCGTTTTGCAAAGCACTCTGCAGCTTATGGGTTGCAAAGCACGACATGCTTTCAAGATAAGCCAAAGGGCTTTTGAGTTGATGCGGAAAGGTCATGGTGTGCTTCCTGAAGGGTCTGGGACAAGATTTTCTGAAAAAGAATGTGTTAATAATTGGGATGTGCGTTTTGCTGAAACTGAGGTTTGGAAACCTCTGAAATCATGTAAAGATGGTGAAAATAAAAACATTCCGTTTGAGCTATATAAAAGGCGCACAACTCTGATTGTAAGAAGAGCAAACTTCTTAGATGTTGTATGCAAAGCGCTGGCAGAATACAAGTATGTGAGTCCCAACCAGAGGGCTGACTTGCTTTTAGCATGCAGAATCCGAGAAAGGAAGGAATCTGTAACTGTATTATTATGTGGTACTAGTGGCTGCGGCAAATCTACCTTGTCTGCCCTGCTGGGTAGCAGGTTAGGCATTACGACAGTAATATCAACTGACTCAATTCGGCACATGATGAGGAGTTTTGTAGATGAGAAACAAAATCCTCTGCTCTGGGCTTCAACTTACCATGCTGGGGAGTATTTGGATCCAGTAGCTGTTGCTGAGGCTAAGGCGAAAAGAAAAGCAAAAAAGTTGGCAGGAAATACTCATTCATATCTGAAGGATGAAGTACTGGAGAGTTCATCCATTGGAAGACTTGATGGCCAACCATCAGACCGTTGCACTGAGCTCATCAGTCAAAAGCAGATGGCTGTTGAAGGATACAAGGCACAGAGTGAGATGGTGATCGACAGTCTTGATAGGCTGATTACTGCATGGGAAGAGCGGAAAGAATCAGTTGTTGTTGAGGGGGTTCACTTAAGCCTAAACTTTGTGATGGGGCTTATGAAGAAGCATCCATCAATTGTACCATTCATGATTTACATCACCAATGAAGACAAACACTTGGAAAGATTTGCAGTGAGAGCAAAATATATGACACTTGACCCAGCTAAGAACAAATATGTGAAGTATATACGTAATATTAGGACAATTCAAGAATATTTATGCAAGAGGGCTGATAAGCATCTTATCCCTAAAATAAACAATACCAATGTTGACAAGAGTGTAGCTGCTATCCATGCAACAGTATTTAGCTGCCTTCGCAGGCGTGAATCTGGCGAACAGCTATATGATCCTGTGCGGAATACTGTTCCTGTTATTGACGAGGAATACAGGAACCAGTGTGCTGCCAACTCATTGAGCTCCAAGTGCATGTTCCAACTCATCCAGAGGAAAGGTTCCTCTAGGAATCTGATGGCTATGGTTAATACTGATGGATCTGTGGCTAAGGCATGGCCTGTTGATACAATTGGTGATACAAATGGGAAGCGTTTATTAGACCCGAGGGCTGAGAATGGAGTGGGGATTCCAATGTATGGTCCATTGCAGATTGATAAAGCTGAACCTGTTAATCTTCAATTTGGTTTCTATGGCATCAGTGCTTGGCCCACTGATGCTGGTGGGACTAGCCGTGCAGGGAGTGTTGATGAATCCAGGGCGGATGGGACTGATACTAGTAAATACCTTTCTTCTTGCTGCAGCTCTCCAAGGTTTTCCGATGGACCTTCCAAGGAGCTTAAGGAAGATATCTCAGTGCATGGGAGTGATGAAGAGGCTGATGATCCTCAAGAGCTTGGCAGCGATGAAGACTTTAGTGAAGATGGTGACATTGAGATTCACGAGGAGGAAGGCTCTGTTGATGAAGAGTCGACAAAATCAGATGAAGAATATGATGATCTGGCAATGCTGGACATGAACGATGGATCCTGGTCGGGTGGTGATGACATGGAGTATATGGAAAAGGCTGGATCTGTTTCTAAGGGGCAAACGAGTGCTCGGGCAGTTGATAAGTATCGCCAGAACCTAGACCACTTCCTGCTCTCTAAAAGTGAGTCATCTAATTCACTCTGCTTATATTCTTCTCATGTGAAGGAGAAAGAAAGGAATGTACGAACTTCTGGTTCTTTGAAAATGAAAAAACGTTCCCTTAGCATTCCAGCCGTGAGAAAGCAAGGTTCAGCCATCGATGGTCCCATACTATCTGGAGCTCCACAGGTGTAGCTCAAGAATTTTGCATAGCTTTTAGTTTTTTGTTTCTTTATTGTTCTCTCAATGATCTCGTCTTTACTGGAATTAGCTTAAGACTATGCGGGTATAAACACACCGCACCCCTGGGTTTAAAAAATGTACAGAGTGGTGCTCCTTGTAATGGACTTGCTTCGTGGTGTAGCGTCCTTTTGTGTATGTATACATAATATCCAGATCTATATTAGGTAAAAATGACTATGAGGCCTACGTAAAGCATACTGCTTAAAACAAAAGGCTCATGTATATCGAAGTTACCTGGGCTGCCATTGACCTCCTTAGGACCTGTAGCTTGGTGCTTGTGGCTGCTGTGTCGGTGCATAACAACTGAGGAAGTATTGGTTAAAACCCAGATGAGTGCTCAAGAGCCAGGGACTCCCAGCTTTTAGGATCCGGAAACAGCCATCTTTCTGGCGAGAGAATTTTGTTTCGAGTTGGCTCACGTCCGCCACCAGTAAGGAAATTGGTGAAGGTGCAGTAATTTTGATAATGAAACAAGGTAATACAATGAAAAAAGGTGAGCTCTAATTCGAACCCATATCTCCTTCCTTGTAGAGACCATTTGTAAGTAGTCAGTATCTATTAGAATTTGGGGCACTACTTCTCTCAGTCATTTCGTCGAACAATAAACATGCACTTCGGATCGTCCC
Coding sequence (CDS)
ATGGGAATAGGGTTGCAAAACCAAAGAAAATGGGGTATTAAATGGGAATTAGAATTAGGAGGCGAATTGGGTAATTTCAGTTGGGAGTCGCCCTCCAAAAAGGACTCGTGGAGGCTGGGTCTGTGCGCTGCGTGGAAGACAGGTGACACGGCAATGACCGCAACAATGAATAGAGCTTCTCCCTTCTTGTTTATGGAGGATCTTCAACTTCAACCCTCGCCTCAATCCTACTTCTTCTACCTTTTGATTTCCAACACACTTCTGAGATCTATAATTGGCTTGGCTTCTACGTACATGGCGGACGTCGCTAAGGTGTTGTATGTTGTGATTTTGGATCATGAAGAACAAGAAAAGGAGGAGAAGGAGTCGTTCCGGTATACTCGCCCCGTTTTGCAAAGCACTCTGCAGCTTATGGGTTGCAAAGCACGACATGCTTTCAAGATAAGCCAAAGGGCTTTTGAGTTGATGCGGAAAGGTCATGGTGTGCTTCCTGAAGGGTCTGGGACAAGATTTTCTGAAAAAGAATGTGTTAATAATTGGGATGTGCGTTTTGCTGAAACTGAGGTTTGGAAACCTCTGAAATCATGTAAAGATGGTGAAAATAAAAACATTCCGTTTGAGCTATATAAAAGGCGCACAACTCTGATTGTAAGAAGAGCAAACTTCTTAGATGTTGTATGCAAAGCGCTGGCAGAATACAAGTATGTGAGTCCCAACCAGAGGGCTGACTTGCTTTTAGCATGCAGAATCCGAGAAAGGAAGGAATCTGTAACTGTATTATTATGTGGTACTAGTGGCTGCGGCAAATCTACCTTGTCTGCCCTGCTGGGTAGCAGGTTAGGCATTACGACAGTAATATCAACTGACTCAATTCGGCACATGATGAGGAGTTTTGTAGATGAGAAACAAAATCCTCTGCTCTGGGCTTCAACTTACCATGCTGGGGAGTATTTGGATCCAGTAGCTGTTGCTGAGGCTAAGGCGAAAAGAAAAGCAAAAAAGTTGGCAGGAAATACTCATTCATATCTGAAGGATGAAGTACTGGAGAGTTCATCCATTGGAAGACTTGATGGCCAACCATCAGACCGTTGCACTGAGCTCATCAGTCAAAAGCAGATGGCTGTTGAAGGATACAAGGCACAGAGTGAGATGGTGATCGACAGTCTTGATAGGCTGATTACTGCATGGGAAGAGCGGAAAGAATCAGTTGTTGTTGAGGGGGTTCACTTAAGCCTAAACTTTGTGATGGGGCTTATGAAGAAGCATCCATCAATTGTACCATTCATGATTTACATCACCAATGAAGACAAACACTTGGAAAGATTTGCAGTGAGAGCAAAATATATGACACTTGACCCAGCTAAGAACAAATATGTGAAGTATATACGTAATATTAGGACAATTCAAGAATATTTATGCAAGAGGGCTGATAAGCATCTTATCCCTAAAATAAACAATACCAATGTTGACAAGAGTGTAGCTGCTATCCATGCAACAGTATTTAGCTGCCTTCGCAGGCGTGAATCTGGCGAACAGCTATATGATCCTGTGCGGAATACTGTTCCTGTTATTGACGAGGAATACAGGAACCAGTGTGCTGCCAACTCATTGAGCTCCAAGTGCATGTTCCAACTCATCCAGAGGAAAGGTTCCTCTAGGAATCTGATGGCTATGGTTAATACTGATGGATCTGTGGCTAAGGCATGGCCTGTTGATACAATTGGTGATACAAATGGGAAGCGTTTATTAGACCCGAGGGCTGAGAATGGAGTGGGGATTCCAATGTATGGTCCATTGCAGATTGATAAAGCTGAACCTGTTAATCTTCAATTTGGTTTCTATGGCATCAGTGCTTGGCCCACTGATGCTGGTGGGACTAGCCGTGCAGGGAGTGTTGATGAATCCAGGGCGGATGGGACTGATACTAGTAAATACCTTTCTTCTTGCTGCAGCTCTCCAAGGTTTTCCGATGGACCTTCCAAGGAGCTTAAGGAAGATATCTCAGTGCATGGGAGTGATGAAGAGGCTGATGATCCTCAAGAGCTTGGCAGCGATGAAGACTTTAGTGAAGATGGTGACATTGAGATTCACGAGGAGGAAGGCTCTGTTGATGAAGAGTCGACAAAATCAGATGAAGAATATGATGATCTGGCAATGCTGGACATGAACGATGGATCCTGGTCGGGTGGTGATGACATGGAGTATATGGAAAAGGCTGGATCTGTTTCTAAGGGGCAAACGAGTGCTCGGGCAGTTGATAAGTATCGCCAGAACCTAGACCACTTCCTGCTCTCTAAAAGTGAGTCATCTAATTCACTCTGCTTATATTCTTCTCATGTGAAGGAGAAAGAAAGGAATGTACGAACTTCTGGTTCTTTGAAAATGAAAAAACGTTCCCTTAGCATTCCAGCCGTGAGAAAGCAAGGTTCAGCCATCGATGGTCCCATACTATCTGGAGCTCCACAGGTGTAG
Protein sequence
MGIGLQNQRKWGIKWELELGGELGNFSWESPSKKDSWRLGLCAAWKTGDTAMTATMNRASPFLFMEDLQLQPSPQSYFFYLLISNTLLRSIIGLASTYMADVAKVLYVVILDHEEQEKEEKESFRYTRPVLQSTLQLMGCKARHAFKISQRAFELMRKGHGVLPEGSGTRFSEKECVNNWDVRFAETEVWKPLKSCKDGENKNIPFELYKRRTTLIVRRANFLDVVCKALAEYKYVSPNQRADLLLACRIRERKESVTVLLCGTSGCGKSTLSALLGSRLGITTVISTDSIRHMMRSFVDEKQNPLLWASTYHAGEYLDPVAVAEAKAKRKAKKLAGNTHSYLKDEVLESSSIGRLDGQPSDRCTELISQKQMAVEGYKAQSEMVIDSLDRLITAWEERKESVVVEGVHLSLNFVMGLMKKHPSIVPFMIYITNEDKHLERFAVRAKYMTLDPAKNKYVKYIRNIRTIQEYLCKRADKHLIPKINNTNVDKSVAAIHATVFSCLRRRESGEQLYDPVRNTVPVIDEEYRNQCAANSLSSKCMFQLIQRKGSSRNLMAMVNTDGSVAKAWPVDTIGDTNGKRLLDPRAENGVGIPMYGPLQIDKAEPVNLQFGFYGISAWPTDAGGTSRAGSVDESRADGTDTSKYLSSCCSSPRFSDGPSKELKEDISVHGSDEEADDPQELGSDEDFSEDGDIEIHEEEGSVDEESTKSDEEYDDLAMLDMNDGSWSGGDDMEYMEKAGSVSKGQTSARAVDKYRQNLDHFLLSKSESSNSLCLYSSHVKEKERNVRTSGSLKMKKRSLSIPAVRKQGSAIDGPILSGAPQV
Homology
BLAST of CmaCh02G013940 vs. ExPASy Swiss-Prot
Match:
Q9FJH9 (P-loop NTPase domain-containing protein LPA1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At5g60760 PE=2 SV=1)
HSP 1 Score: 820.5 bits (2118), Expect = 1.7e-236
Identity = 477/750 (63.60%), Postives = 556/750 (74.13%), Query Frame = 0
Query: 99 MADVAKVLYVVILD--------HEEQEKEEKESFRYTRPVLQSTLQLMGCKARHAFKISQ 158
M + KV+Y+V++D E+ K+SFRYTRPVLQSTLQLMGCKARHAFKIS+
Sbjct: 1 MTETTKVMYIVVVDGTDTAETVEEDGTGTWKDSFRYTRPVLQSTLQLMGCKARHAFKISR 60
Query: 159 RAFELMRKGHGVL--PEGSGTRFSEKECVNNWDV-RFAETEVWKPLKSCKDGE---NKNI 218
R FEL+R ++ P S + E E D A E + S + +K+
Sbjct: 61 RVFELIRSEGSLILSPSLSPSHSKESEFQKTGDASACANVEKANKVNSLATDDVDKSKSK 120
Query: 219 PFELYKRRTTLIVRRANFLDVVCKALAEYKYVSPNQRADLLLACRIRERKESVTVLLCGT 278
PFE+YKRRTT++V R F++VVC ALAEYKYV +QRADL+L+CRIRERKESVTVLLCGT
Sbjct: 121 PFEVYKRRTTVVVSREIFVNVVCDALAEYKYVGHDQRADLILSCRIRERKESVTVLLCGT 180
Query: 279 SGCGKSTLSALLGSRLGITTVISTDSIRHMMRSFVDEKQNPLLWASTYHAGEYLDPVAVA 338
SGCGKSTLSALLGSRLGITTV+STDSIRHMMRSFVDEKQNPLLWASTYHAGEYLDPVAVA
Sbjct: 181 SGCGKSTLSALLGSRLGITTVVSTDSIRHMMRSFVDEKQNPLLWASTYHAGEYLDPVAVA 240
Query: 339 EAKA-KRKAKKLAGNTHSYLKDEVLESSSIGR------LDGQPSDRCTELISQKQMAVEG 398
E+KA +R+AKK+ ++DE ++S G+ D + L+S KQMAVEG
Sbjct: 241 ESKARRRRAKKM-----DSIEDEKAKASEGGKAKNTQQTDVGSTKNTPVLLSPKQMAVEG 300
Query: 399 YKAQSEMVIDSLDRLITAWEERKESVVVEGVHLSLNFVMGLMKKHPSIVPFMIYITNEDK 458
+KAQSEMVID+LDRLITAWEERKESV+VEGVHLSLNFVMGLMKKHPSIVPFM+YI NE+K
Sbjct: 301 FKAQSEMVIDNLDRLITAWEERKESVIVEGVHLSLNFVMGLMKKHPSIVPFMVYIANEEK 360
Query: 459 HLERFAVRAKYMTLDPAKNKYVKYIRNIRTIQEYLCKRADKHLIPKINNTNVDKSVAAIH 518
HLERFAVRAKYMTLDP KNKYVKYIRNIRTIQ+YLCKRADKHL+PKINNTNVDKSVAAIH
Sbjct: 361 HLERFAVRAKYMTLDPEKNKYVKYIRNIRTIQDYLCKRADKHLVPKINNTNVDKSVAAIH 420
Query: 519 ATVFSCLRRRESGEQLYDPVRNTVPVIDEEYRNQCAANSLSSKCMFQLIQRKGSSRNLMA 578
ATVFSCLRRRE+GE LYD NTV VID+EYRNQC ANSLSSK MFQLIQRKGSSR+LMA
Sbjct: 421 ATVFSCLRRREAGEHLYDATTNTVSVIDDEYRNQCTANSLSSKGMFQLIQRKGSSRHLMA 480
Query: 579 MVNTDGSVAKAWPVDTIGDTNGKRLL--DPRAENGVGIPMYGPLQIDKAEPVNLQFGFYG 638
++NTDG+ A+ WPV D +GK + + ENG+ P+YG LQ KAEPVNLQFG +G
Sbjct: 481 LLNTDGTFARTWPVTGKVDESGKPVFCNEMIEENGMEHPVYGYLQ--KAEPVNLQFGLFG 540
Query: 639 ISAWPTDAGGTSRAGSVDESRADGTDT-SKYLSSCCSSPRFSDGPSKELKEDISVHGSDE 698
ISAWP+D G TSRAGSVD+ +AD +T S+Y SSCCSSPR S+G SKELKED SVHGSDE
Sbjct: 541 ISAWPSD-GATSRAGSVDDCKADMAETSSRYYSSCCSSPRMSEGTSKELKEDQSVHGSDE 600
Query: 699 EA-DDPQELGSDEDFSEDGDIEIHEEEGSVDEESTKSDEEYDDLAMLDMNDGSWSGGDDM 758
E DDP E D DFS+D + H+E GSVDE+STKSDEEYDDLAM D + W+ ++
Sbjct: 601 EVEDDPPE--PDTDFSDDDNKRDHDEVGSVDEQSTKSDEEYDDLAMEDKS--YWTDEEEE 660
Query: 759 EYMEKAGSVSKGQTSARAVDKYRQNLDHFLLSKSES-SNSLCLYSSHVKEKERNVRT-SG 818
A K A DKY QNLD FL + ++ L L +S + + N R G
Sbjct: 661 SRDTIAIMSEKNNKQATKEDKYIQNLDLFLRTANQQLVEPLQLCASLLTCENGNTRLWLG 720
Query: 819 SLKMKKRSLSIPAVRKQGSAIDGPILSGAP 822
KM+KRSLSI A+ K GS + IL GAP
Sbjct: 721 KEKMRKRSLSISAIGKHGSGLGDAILLGAP 738
BLAST of CmaCh02G013940 vs. ExPASy Swiss-Prot
Match:
Q93ZS1 (P-loop NTPase domain-containing protein LPA1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At3g45090 PE=2 SV=1)
HSP 1 Score: 815.8 bits (2106), Expect = 4.3e-235
Identity = 467/738 (63.28%), Postives = 545/738 (73.85%), Query Frame = 0
Query: 99 MADVAKVLYVVILDH-EEQEKEEKESFRYTRPVLQSTLQLMGCKARHAFKISQRAFELMR 158
M + KVLY+V+ + ++ + +SFRYTRPVLQSTLQLMGCKARHAFKIS+R FEL+R
Sbjct: 2 MTEATKVLYIVVREEGDDDDNNGDDSFRYTRPVLQSTLQLMGCKARHAFKISRRVFELIR 61
Query: 159 K--GHGVLPE-GSGTRFSEK----ECVNNWDVRFAETEVWKPLKSCKDGENKNIPFELYK 218
PE G F+++ CV + +V K NK+ PFE+YK
Sbjct: 62 SEGSCNTSPENGKEPEFAKEVGGSTCVEKLNCLVVAGDVDK---------NKSKPFEMYK 121
Query: 219 RRTTLIVRRANFLDVVCKALAEYKYVSPNQRADLLLACRIRERKESVTVLLCGTSGCGKS 278
RRTT++V R F+DVVC ALAEYKYV +QRADL+LACRIRERKESVTVLLCGTSGCGKS
Sbjct: 122 RRTTVVVSREIFVDVVCDALAEYKYVGRDQRADLILACRIRERKESVTVLLCGTSGCGKS 181
Query: 279 TLSALLGSRLGITTVISTDSIRHMMRSFVDEKQNPLLWASTYHAGEYLDPVAVAEAKAKR 338
TLSALLGSRLGITTV+STDSIRHMMRSF DEKQNPLLWASTYHAGEYLDPVAVAE+KAKR
Sbjct: 182 TLSALLGSRLGITTVVSTDSIRHMMRSFADEKQNPLLWASTYHAGEYLDPVAVAESKAKR 241
Query: 339 KAKKLAGNTHSYLKDEVLESSSIGRLDGQPSDRCTELISQKQMAVEGYKAQSEMVIDSLD 398
KAKKL G+ +S+ + D + TEL+S KQMA+EGYKAQSEMVIDSLD
Sbjct: 242 KAKKLKGSRG--------VNSNAQKTDAGSNSSTTELLSHKQMAIEGYKAQSEMVIDSLD 301
Query: 399 RLITAWEERKESVVVEGVHLSLNFVMGLMKKHPSIVPFMIYITNEDKHLERFAVRAKYMT 458
RLIT WEER ESVVVEGVHLSLNFVMGLMKKHPSIVPFM+YI NE+KHLERFAVRAKYMT
Sbjct: 302 RLITTWEERNESVVVEGVHLSLNFVMGLMKKHPSIVPFMVYIANEEKHLERFAVRAKYMT 361
Query: 459 LDPAKNKYVKYIRNIRTIQEYLCKRADKHLIPKINNTNVDKSVAAIHATVFSCLRRRESG 518
LDPAKNKYVKYIRNIRTIQ+YLCKRADKHL+PKINNTNVDKSVA IHATVF CLRRRE+G
Sbjct: 362 LDPAKNKYVKYIRNIRTIQDYLCKRADKHLVPKINNTNVDKSVATIHATVFGCLRRRETG 421
Query: 519 EQLYDPVRNTVPVIDEEYRNQCAANSLSSKCMFQLIQRKGSSRNLMAMVNTDGSVAKAWP 578
E+LYD NTV VID+E+RNQCAANSL+SK MFQ+IQR+GSSR MA+ NTDG+VAK WP
Sbjct: 422 EKLYDTTTNTVSVIDDEHRNQCAANSLTSKGMFQVIQRQGSSRRFMALCNTDGTVAKTWP 481
Query: 579 VDTIGDTNGKRLLDPRAENGVGIPMYGPLQIDKAEPVNLQFGFYGISAWPTDAGGTSRAG 638
V ++G K +++ ++G Q+ KAEPVNLQFG +GISAWP+D G TS AG
Sbjct: 482 VASVGKIR-KPVVNTEMDDGT------EHQLHKAEPVNLQFGHFGISAWPSD-GATSHAG 541
Query: 639 SVDESRADGTDT-SKYLSSCCSSPRFSDGPSKELKEDISVHGSDEE----ADDPQELGSD 698
SVD+ RAD +T S++ SSCCSSPR SDGPSKEL E+ SV+GSDE+ DD E SD
Sbjct: 542 SVDDLRADIIETGSRHYSSCCSSPRTSDGPSKELMEEQSVNGSDEDDEEGDDDFHEPDSD 601
Query: 699 EDFSEDGDIEIHEEEGSVDEESTKSDEEYDDLAMLDMNDGSWSGGDDMEYMEKAGSVSKG 758
ED S++ D +E GSVDEESTKSDEEYDDLAM D + W+ ++ E + VS+
Sbjct: 602 EDLSDNNDERNRDEIGSVDEESTKSDEEYDDLAMEDKS--YWTDNEEEESRDTISMVSQN 661
Query: 759 Q----TSARAVDKYRQNLDHFLLSKSES-SNSLCLYSSHVKEKERNVRTSGSLKMKKRSL 818
+ DKY QNLD FL + ++ + SL L S + V S KM+KRSL
Sbjct: 662 NHNEASKTNKDDKYSQNLDLFLKTTNQPLTESLELTSEY--RNRMGVAASDKAKMRKRSL 710
BLAST of CmaCh02G013940 vs. ExPASy Swiss-Prot
Match:
B9F4I8 (P-loop NTPase domain-containing protein LPA1 OS=Oryza sativa subsp. japonica OX=39947 GN=LPA1 PE=2 SV=1)
HSP 1 Score: 752.3 bits (1941), Expect = 5.8e-216
Identity = 425/654 (64.98%), Postives = 497/654 (75.99%), Query Frame = 0
Query: 104 KVLYVVILDHEEQEKEEKESFRYTRPVLQSTLQLMGCKARHAFKISQRAFELMRKGHGVL 163
K+LY+ + D + +FRYTRPVLQ TLQLMGCKARHAFKIS+R F +MR
Sbjct: 42 KLLYIAVSD-----AAARRAFRYTRPVLQGTLQLMGCKARHAFKISKRVFNVMR---SEF 101
Query: 164 PEGSGTRFSEKECVNNWDVRFAETEVWKPLKSCKDGENKNIPFELYKRRTTLIVRRANFL 223
+ S + ++ E N + E+ KP + +IPFELYK +TT++V R FL
Sbjct: 102 LDASKSDTADNE--ENAPSLVKDVEMLKP--KILEATLSSIPFELYKTQTTIVVSREKFL 161
Query: 224 DVVCKALAEYKYVSPNQRADLLLACRIRERKESVTVLLCGTSGCGKSTLSALLGSRLGIT 283
VVC AL+ YKYV PNQ+AD LLACRI+ERKESVTVLLCGTSGCGKSTLS+LLGSRLGIT
Sbjct: 162 SVVCDALSSYKYVGPNQKADFLLACRIKERKESVTVLLCGTSGCGKSTLSSLLGSRLGIT 221
Query: 284 TVISTDSIRHMMRSFVDEKQNPLLWASTYHAGEYLDPVAVAEAKAKRKAKKL----AGNT 343
TV+STDSIRHMMR F DEKQNPLL+ASTYHAGE LDPVAVA+AKAKRKA+KL NT
Sbjct: 222 TVVSTDSIRHMMRGFTDEKQNPLLYASTYHAGECLDPVAVAQAKAKRKAQKLDIVSHPNT 281
Query: 344 HSYLKDEVLESSSIGRLDGQPSDRCTELISQKQMAVEGYKAQSEMVIDSLDRLITAWEER 403
+ D + + G + P TELI KQMA+EG+KAQSEMVIDSLDRLIT+WEE+
Sbjct: 282 NEGRDDTSDDKAHHGSSELPPR---TELIGSKQMAIEGFKAQSEMVIDSLDRLITSWEEQ 341
Query: 404 KESVVVEGVHLSLNFVMGLMKKHPSIVPFMIYITNEDKHLERFAVRAKYMTLDPAKNKYV 463
K+SV+VEGVHLSLNFVMGLMKKHPSI+PFM+YI NE+KH+ERFAVRAKYMTLDPAKN+Y+
Sbjct: 342 KQSVIVEGVHLSLNFVMGLMKKHPSIIPFMVYIANEEKHMERFAVRAKYMTLDPAKNRYI 401
Query: 464 KYIRNIRTIQEYLCKRADKHLIPKINNTNVDKSVAAIHATVFSCLRRRESGEQLYDPVRN 523
KYIRNIR IQ+YLC RADKHL+PKINNTNVD+SVAAIHATVFSCLRRRE+GEQLYD N
Sbjct: 402 KYIRNIRAIQDYLCNRADKHLVPKINNTNVDQSVAAIHATVFSCLRRREAGEQLYDLNTN 461
Query: 524 TVPVIDEEYRNQCAANSLSSKCMFQLIQRKGSSRNLMAMVNTDGSVAKAWPVDTIGDTNG 583
TV V++EEYRNQ AANSL SK MFQLIQR+GSSRNLMA++NTDGSV KAW VD NG
Sbjct: 462 TVAVVNEEYRNQRAANSLGSKGMFQLIQRQGSSRNLMAILNTDGSVTKAWHVD---KNNG 521
Query: 584 KRLLD-PRAENGVGIPMYGPLQIDKAEPVNLQFGFYGISAWPTDAGGTSRAGSVDESRAD 643
LD ++ PMY KAEPVNLQFG +GISAW +D GGTS GSVD+ RAD
Sbjct: 522 NGSLDGTSSDKSTKNPMYD--TFGKAEPVNLQFGSFGISAWMSDTGGTSHTGSVDDLRAD 581
Query: 644 GTDT-SKYLSSCCSSPRFSDGPSKELKE-DISVHGSDEEADDPQELGSDEDFSEDGDIEI 703
G +T +Y SSCCSSP+ SD PSKEL E D SV GS+E+ADDP + G+DED + D + ++
Sbjct: 582 GIETGGRYYSSCCSSPKVSDCPSKELMEDDYSVFGSEEDADDPPDAGTDEDLT-DEERDM 641
Query: 704 HE-EEGSVDEESTKSDEEYDDLAMLD-MNDGSWSGGDDMEYMEKAGSVSKGQTS 749
HE E GSVDE STKSDEEYDDLAM D M +G WS DD E+A S +K ++
Sbjct: 642 HEIEAGSVDEHSTKSDEEYDDLAMQDVMENGYWS--DD----EQAASSTKNSSN 668
BLAST of CmaCh02G013940 vs. ExPASy Swiss-Prot
Match:
Q651A1 (P-loop NTPase domain-containing protein LPA1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0572200 PE=3 SV=1)
HSP 1 Score: 718.0 bits (1852), Expect = 1.2e-205
Identity = 419/731 (57.32%), Postives = 515/731 (70.45%), Query Frame = 0
Query: 104 KVLYVVILDHEEQEKEEKESFRYTRPVLQSTLQLMGCKARHAFKISQRAFELMRKGH--G 163
K+LY+V++D ++ +FRYTR +L STLQLMGCK RHAF+IS R F+ +R GH G
Sbjct: 11 KLLYIVVVD------DDGATFRYTRSLLHSTLQLMGCKPRHAFEISGRVFDEIR-GHMGG 70
Query: 164 VLPEGSGTRFSEKECVNNWDVRFAETEVWKPLKSCKDGENKNIPFELYKRRTTLIVRRAN 223
+ G G E A+ E P + FELYKRRTTL++ R
Sbjct: 71 DMAMGGGGGVQRYELA-------ADAEAASP---------RQFQFELYKRRTTLLIPRPL 130
Query: 224 FLDVVCKALAEYKYVSPNQRADLLLACRIRERKESVTVLLCGTSGCGKSTLSALLGSRLG 283
FL +VC ALA YKYV+P+QR+DL ACRIRERKESVT+LLCGTSGCGKSTLS LLGSRLG
Sbjct: 131 FLRLVCHALALYKYVAPDQRSDLHRACRIRERKESVTILLCGTSGCGKSTLSTLLGSRLG 190
Query: 284 ITTVISTDSIRHMMRSFVDEKQNPLLWASTYHAGEYLDPVAVAEAKAKRKAKKLAGNTHS 343
ITTV+STDSIRHMMRSFV+EKQNPLLWASTYHAGE LDPVAVA+AKA+RKAKK +G + +
Sbjct: 191 ITTVVSTDSIRHMMRSFVEEKQNPLLWASTYHAGECLDPVAVADAKARRKAKKRSGISTT 250
Query: 344 YLKDEVLESSSIGRLDGQPSDRCTELISQKQMAVEGYKAQSEMVIDSLDRLITAWEERKE 403
D + DG+P I +KQMA+EGYKAQSEMVIDSLDRLITAWE+RKE
Sbjct: 251 STIDFDKTRPLNDKPDGKP-------IGKKQMAIEGYKAQSEMVIDSLDRLITAWEDRKE 310
Query: 404 SVVVEGVHLSLNFVMGLMKKHPSIVPFMIYITNEDKHLERFAVRAKYMTLDPAKNKYVKY 463
SVVVEGVHLSLNFVMGLM+KHPSI+PFMIYI++E KH ERFAVRAKYMTLDP KNKYVKY
Sbjct: 311 SVVVEGVHLSLNFVMGLMRKHPSIIPFMIYISDEGKHTERFAVRAKYMTLDPTKNKYVKY 370
Query: 464 IRNIRTIQEYLCKRADKHLIPKINNTNVDKSVAAIHATVFSCLRRRESGEQLYDPVRNTV 523
I NIRTIQEYLC RADK+L+PK+NNTNVD+SVA+IHATVFSCLRRR +G+QLYDP NTV
Sbjct: 371 ISNIRTIQEYLCSRADKYLVPKVNNTNVDRSVASIHATVFSCLRRRAAGDQLYDPATNTV 430
Query: 524 PVIDEEYRNQCAANSLSSKCMFQLIQRKGSSRNLMAMVNTDGSVAKAWPVDTIGDTNGKR 583
V++EEY+NQC ANS+SSK MF+LIQR GSSR LMA+VN DGSV+KAWPV++ +GK
Sbjct: 431 AVVNEEYKNQCVANSMSSKGMFKLIQRLGSSRKLMAIVNVDGSVSKAWPVES-SSGDGKG 490
Query: 584 LLDPRAENGVGIPMYGPLQIDKAEPVNLQFGFYGISAWPTDAGGTSRAGSVDESRADGTD 643
+ ++ VG P+YGPL I +AE VNLQFG +GISAWPTDAG TS+AGSV+ES + +
Sbjct: 491 GSENGSKKYVGDPIYGPLNIGRAESVNLQFGAFGISAWPTDAGCTSQAGSVNESWDNANE 550
Query: 644 -TSKYLSSCCSSPRFSDGPSKELKEDISVHGSD-------EEADDPQELGSDEDFSEDGD 703
T ++ S SP+ DG KE+KE + GSD E AD P GS+ED SE+
Sbjct: 551 GTGSHVPSSSGSPKKLDGHCKEIKESAAASGSDDDEEEEEEAADVPPNSGSEEDLSEEDI 610
Query: 704 IEIHEE-EGSVDEESTKSDEEYDDLAMLDMNDGSWSGGDDMEYM------EKAGSVSKGQ 763
IHEE EGSVDE+ +SDEEYDDLAM D + + D + + +K ++ K Q
Sbjct: 611 RAIHEEMEGSVDEDCNRSDEEYDDLAMRDCMENGFLTDDGVVHTVFDGNGQKHSTLRKRQ 670
Query: 764 TSARAVDKYRQNLDHFLLSKSESSNSLCLYSSHVKEKERNVRTSGSLKMKKRSLSIPAV- 813
+ R + K +D + SS++L + +S + R + S S + R S P++
Sbjct: 671 VNLRTLSK----IDLDSPDTARSSSALPISASSKRNGTRRWKRSLSESFRSRPRSAPSLV 706
BLAST of CmaCh02G013940 vs. ExPASy Swiss-Prot
Match:
Q8T1P1 (Uncharacterized protein DDB_G0273453/DDB_G0273565 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0273453 PE=4 SV=2)
HSP 1 Score: 293.1 bits (749), Expect = 9.7e-78
Identity = 172/467 (36.83%), Postives = 259/467 (55.46%), Query Frame = 0
Query: 125 RYTRPVLQSTLQLMGCKARHAFKISQRAFELMRKGHGVLPEGSGTRFSEKECVNNWDVRF 184
RY R L TL+ MGCK+ HA +IS FE + K + T + V +
Sbjct: 124 RYARFHLNLTLKFMGCKSIHARQISNTVFEQLEKCR-IEQNKQLTATNNNAIVTTDSITK 183
Query: 185 AETEVWKPLKSCKDGENKNIPFELYKRRTTLIVRRANFLDVVCKALAEYKYVSPNQRADL 244
E + + ++R F ++ L+ Y+Y P D
Sbjct: 184 TEQSTTTTTTTTTTTTTTTATTTTQPPIYCVSIQRNIFYYIIGHILSCYQYSKPQYIIDF 243
Query: 245 LLACRIRERKESVTVLLCGTSGCGKSTLSALLGSRLGITTVISTDSIRHMMRSFVDEKQN 304
++C ++++K S T+LL GTSGCGKSTL+ALL SR+G T VISTD+IR ++R F+ +++
Sbjct: 244 PVSCEVQDKKHSFTILLGGTSGCGKSTLTALLASRIGFTAVISTDNIRQLLRKFISRQES 303
Query: 305 PLLWASTYHAGEYLDPVAVAEAKAKRKAKKLAGNTHSYLKDEVLESSSIGRLDGQPSDRC 364
P+LWASTYHAGE + PS
Sbjct: 304 PILWASTYHAGEII---------------------------------------SNPS--- 363
Query: 365 TELISQKQMAVEGYKAQSEMVIDSLDRLITAWEERKESVVVEGVHLSLNFVMGLMKKHPS 424
+S K+ ++GY+AQ+EM+ + LD LI +E+RKES++VEGVHL ++ L+KKHPS
Sbjct: 364 ---LSHKEKILQGYEAQNEMIFNKLDILIGHYEKRKESLIVEGVHLDTKLILRLVKKHPS 423
Query: 425 IVPFMIYITNEDKHLERFAVRAKYMTLDPAKNKYVKYIRNIRTIQEYLCKRADKHLIPKI 484
+PF++YI+NE KH ERFA+R+KYMTLDP +NKY KY +NIR I ++LC AD+H+IP+I
Sbjct: 424 CIPFLMYISNEAKHKERFAIRSKYMTLDPHQNKYTKYFKNIRIINDHLCHGADEHMIPQI 483
Query: 485 NNTNVDKSVAAIHATVFSCLRRR-ESGEQLYDPVRNTVPVIDEEYRNQCAANSLSSKCMF 544
+NT++D+S+A IH T+F+CL+R+ + GE Y+ + + ++ +Y Q SSK M
Sbjct: 484 DNTSIDRSLATIHGTIFACLKRKVQCGESYYNHETDKMNMLYNQY-EQIQHQFWSSKGML 543
Query: 545 QLIQRKGS-----SRNLMAMVNTDGSVAKAWPV-DTIGDTNGKRLLD 585
+LIQ+K + + N+ V+ + S + V + GD NG +D
Sbjct: 544 RLIQKKKTVSPHGNNNVTGDVDNNNSNSNNNNVNNNNGDNNGDSNVD 543
BLAST of CmaCh02G013940 vs. TAIR 10
Match:
AT5G60760.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )
HSP 1 Score: 820.5 bits (2118), Expect = 1.2e-237
Identity = 477/750 (63.60%), Postives = 556/750 (74.13%), Query Frame = 0
Query: 99 MADVAKVLYVVILD--------HEEQEKEEKESFRYTRPVLQSTLQLMGCKARHAFKISQ 158
M + KV+Y+V++D E+ K+SFRYTRPVLQSTLQLMGCKARHAFKIS+
Sbjct: 1 MTETTKVMYIVVVDGTDTAETVEEDGTGTWKDSFRYTRPVLQSTLQLMGCKARHAFKISR 60
Query: 159 RAFELMRKGHGVL--PEGSGTRFSEKECVNNWDV-RFAETEVWKPLKSCKDGE---NKNI 218
R FEL+R ++ P S + E E D A E + S + +K+
Sbjct: 61 RVFELIRSEGSLILSPSLSPSHSKESEFQKTGDASACANVEKANKVNSLATDDVDKSKSK 120
Query: 219 PFELYKRRTTLIVRRANFLDVVCKALAEYKYVSPNQRADLLLACRIRERKESVTVLLCGT 278
PFE+YKRRTT++V R F++VVC ALAEYKYV +QRADL+L+CRIRERKESVTVLLCGT
Sbjct: 121 PFEVYKRRTTVVVSREIFVNVVCDALAEYKYVGHDQRADLILSCRIRERKESVTVLLCGT 180
Query: 279 SGCGKSTLSALLGSRLGITTVISTDSIRHMMRSFVDEKQNPLLWASTYHAGEYLDPVAVA 338
SGCGKSTLSALLGSRLGITTV+STDSIRHMMRSFVDEKQNPLLWASTYHAGEYLDPVAVA
Sbjct: 181 SGCGKSTLSALLGSRLGITTVVSTDSIRHMMRSFVDEKQNPLLWASTYHAGEYLDPVAVA 240
Query: 339 EAKA-KRKAKKLAGNTHSYLKDEVLESSSIGR------LDGQPSDRCTELISQKQMAVEG 398
E+KA +R+AKK+ ++DE ++S G+ D + L+S KQMAVEG
Sbjct: 241 ESKARRRRAKKM-----DSIEDEKAKASEGGKAKNTQQTDVGSTKNTPVLLSPKQMAVEG 300
Query: 399 YKAQSEMVIDSLDRLITAWEERKESVVVEGVHLSLNFVMGLMKKHPSIVPFMIYITNEDK 458
+KAQSEMVID+LDRLITAWEERKESV+VEGVHLSLNFVMGLMKKHPSIVPFM+YI NE+K
Sbjct: 301 FKAQSEMVIDNLDRLITAWEERKESVIVEGVHLSLNFVMGLMKKHPSIVPFMVYIANEEK 360
Query: 459 HLERFAVRAKYMTLDPAKNKYVKYIRNIRTIQEYLCKRADKHLIPKINNTNVDKSVAAIH 518
HLERFAVRAKYMTLDP KNKYVKYIRNIRTIQ+YLCKRADKHL+PKINNTNVDKSVAAIH
Sbjct: 361 HLERFAVRAKYMTLDPEKNKYVKYIRNIRTIQDYLCKRADKHLVPKINNTNVDKSVAAIH 420
Query: 519 ATVFSCLRRRESGEQLYDPVRNTVPVIDEEYRNQCAANSLSSKCMFQLIQRKGSSRNLMA 578
ATVFSCLRRRE+GE LYD NTV VID+EYRNQC ANSLSSK MFQLIQRKGSSR+LMA
Sbjct: 421 ATVFSCLRRREAGEHLYDATTNTVSVIDDEYRNQCTANSLSSKGMFQLIQRKGSSRHLMA 480
Query: 579 MVNTDGSVAKAWPVDTIGDTNGKRLL--DPRAENGVGIPMYGPLQIDKAEPVNLQFGFYG 638
++NTDG+ A+ WPV D +GK + + ENG+ P+YG LQ KAEPVNLQFG +G
Sbjct: 481 LLNTDGTFARTWPVTGKVDESGKPVFCNEMIEENGMEHPVYGYLQ--KAEPVNLQFGLFG 540
Query: 639 ISAWPTDAGGTSRAGSVDESRADGTDT-SKYLSSCCSSPRFSDGPSKELKEDISVHGSDE 698
ISAWP+D G TSRAGSVD+ +AD +T S+Y SSCCSSPR S+G SKELKED SVHGSDE
Sbjct: 541 ISAWPSD-GATSRAGSVDDCKADMAETSSRYYSSCCSSPRMSEGTSKELKEDQSVHGSDE 600
Query: 699 EA-DDPQELGSDEDFSEDGDIEIHEEEGSVDEESTKSDEEYDDLAMLDMNDGSWSGGDDM 758
E DDP E D DFS+D + H+E GSVDE+STKSDEEYDDLAM D + W+ ++
Sbjct: 601 EVEDDPPE--PDTDFSDDDNKRDHDEVGSVDEQSTKSDEEYDDLAMEDKS--YWTDEEEE 660
Query: 759 EYMEKAGSVSKGQTSARAVDKYRQNLDHFLLSKSES-SNSLCLYSSHVKEKERNVRT-SG 818
A K A DKY QNLD FL + ++ L L +S + + N R G
Sbjct: 661 SRDTIAIMSEKNNKQATKEDKYIQNLDLFLRTANQQLVEPLQLCASLLTCENGNTRLWLG 720
Query: 819 SLKMKKRSLSIPAVRKQGSAIDGPILSGAP 822
KM+KRSLSI A+ K GS + IL GAP
Sbjct: 721 KEKMRKRSLSISAIGKHGSGLGDAILLGAP 738
BLAST of CmaCh02G013940 vs. TAIR 10
Match:
AT3G45090.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )
HSP 1 Score: 815.8 bits (2106), Expect = 3.1e-236
Identity = 467/738 (63.28%), Postives = 545/738 (73.85%), Query Frame = 0
Query: 99 MADVAKVLYVVILDH-EEQEKEEKESFRYTRPVLQSTLQLMGCKARHAFKISQRAFELMR 158
M + KVLY+V+ + ++ + +SFRYTRPVLQSTLQLMGCKARHAFKIS+R FEL+R
Sbjct: 2 MTEATKVLYIVVREEGDDDDNNGDDSFRYTRPVLQSTLQLMGCKARHAFKISRRVFELIR 61
Query: 159 K--GHGVLPE-GSGTRFSEK----ECVNNWDVRFAETEVWKPLKSCKDGENKNIPFELYK 218
PE G F+++ CV + +V K NK+ PFE+YK
Sbjct: 62 SEGSCNTSPENGKEPEFAKEVGGSTCVEKLNCLVVAGDVDK---------NKSKPFEMYK 121
Query: 219 RRTTLIVRRANFLDVVCKALAEYKYVSPNQRADLLLACRIRERKESVTVLLCGTSGCGKS 278
RRTT++V R F+DVVC ALAEYKYV +QRADL+LACRIRERKESVTVLLCGTSGCGKS
Sbjct: 122 RRTTVVVSREIFVDVVCDALAEYKYVGRDQRADLILACRIRERKESVTVLLCGTSGCGKS 181
Query: 279 TLSALLGSRLGITTVISTDSIRHMMRSFVDEKQNPLLWASTYHAGEYLDPVAVAEAKAKR 338
TLSALLGSRLGITTV+STDSIRHMMRSF DEKQNPLLWASTYHAGEYLDPVAVAE+KAKR
Sbjct: 182 TLSALLGSRLGITTVVSTDSIRHMMRSFADEKQNPLLWASTYHAGEYLDPVAVAESKAKR 241
Query: 339 KAKKLAGNTHSYLKDEVLESSSIGRLDGQPSDRCTELISQKQMAVEGYKAQSEMVIDSLD 398
KAKKL G+ +S+ + D + TEL+S KQMA+EGYKAQSEMVIDSLD
Sbjct: 242 KAKKLKGSRG--------VNSNAQKTDAGSNSSTTELLSHKQMAIEGYKAQSEMVIDSLD 301
Query: 399 RLITAWEERKESVVVEGVHLSLNFVMGLMKKHPSIVPFMIYITNEDKHLERFAVRAKYMT 458
RLIT WEER ESVVVEGVHLSLNFVMGLMKKHPSIVPFM+YI NE+KHLERFAVRAKYMT
Sbjct: 302 RLITTWEERNESVVVEGVHLSLNFVMGLMKKHPSIVPFMVYIANEEKHLERFAVRAKYMT 361
Query: 459 LDPAKNKYVKYIRNIRTIQEYLCKRADKHLIPKINNTNVDKSVAAIHATVFSCLRRRESG 518
LDPAKNKYVKYIRNIRTIQ+YLCKRADKHL+PKINNTNVDKSVA IHATVF CLRRRE+G
Sbjct: 362 LDPAKNKYVKYIRNIRTIQDYLCKRADKHLVPKINNTNVDKSVATIHATVFGCLRRRETG 421
Query: 519 EQLYDPVRNTVPVIDEEYRNQCAANSLSSKCMFQLIQRKGSSRNLMAMVNTDGSVAKAWP 578
E+LYD NTV VID+E+RNQCAANSL+SK MFQ+IQR+GSSR MA+ NTDG+VAK WP
Sbjct: 422 EKLYDTTTNTVSVIDDEHRNQCAANSLTSKGMFQVIQRQGSSRRFMALCNTDGTVAKTWP 481
Query: 579 VDTIGDTNGKRLLDPRAENGVGIPMYGPLQIDKAEPVNLQFGFYGISAWPTDAGGTSRAG 638
V ++G K +++ ++G Q+ KAEPVNLQFG +GISAWP+D G TS AG
Sbjct: 482 VASVGKIR-KPVVNTEMDDGT------EHQLHKAEPVNLQFGHFGISAWPSD-GATSHAG 541
Query: 639 SVDESRADGTDT-SKYLSSCCSSPRFSDGPSKELKEDISVHGSDEE----ADDPQELGSD 698
SVD+ RAD +T S++ SSCCSSPR SDGPSKEL E+ SV+GSDE+ DD E SD
Sbjct: 542 SVDDLRADIIETGSRHYSSCCSSPRTSDGPSKELMEEQSVNGSDEDDEEGDDDFHEPDSD 601
Query: 699 EDFSEDGDIEIHEEEGSVDEESTKSDEEYDDLAMLDMNDGSWSGGDDMEYMEKAGSVSKG 758
ED S++ D +E GSVDEESTKSDEEYDDLAM D + W+ ++ E + VS+
Sbjct: 602 EDLSDNNDERNRDEIGSVDEESTKSDEEYDDLAMEDKS--YWTDNEEEESRDTISMVSQN 661
Query: 759 Q----TSARAVDKYRQNLDHFLLSKSES-SNSLCLYSSHVKEKERNVRTSGSLKMKKRSL 818
+ DKY QNLD FL + ++ + SL L S + V S KM+KRSL
Sbjct: 662 NHNEASKTNKDDKYSQNLDLFLKTTNQPLTESLELTSEY--RNRMGVAASDKAKMRKRSL 710
BLAST of CmaCh02G013940 vs. TAIR 10
Match:
AT3G45090.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )
HSP 1 Score: 753.1 bits (1943), Expect = 2.4e-217
Identity = 421/629 (66.93%), Postives = 485/629 (77.11%), Query Frame = 0
Query: 200 ENKNIPFELYKRRTTLIVRRANFLDVVCKALAEYKYVSPNQRADLLLACRIRERKESVTV 259
+NK+ PFE+YKRRTT++V R F+DVVC ALAEYKYV +QRADL+LACRIRERKESVTV
Sbjct: 83 KNKSKPFEMYKRRTTVVVSREIFVDVVCDALAEYKYVGRDQRADLILACRIRERKESVTV 142
Query: 260 LLCGTSGCGKSTLSALLGSRLGITTVISTDSIRHMMRSFVDEKQNPLLWASTYHAGEYLD 319
LLCGTSGCGKSTLSALLGSRLGITTV+STDSIRHMMRSF DEKQNPLLWASTYHAGEYLD
Sbjct: 143 LLCGTSGCGKSTLSALLGSRLGITTVVSTDSIRHMMRSFADEKQNPLLWASTYHAGEYLD 202
Query: 320 PVAVAEAKAKRKAKKLAGNTHSYLKDEVLESSSIGRLDGQPSDRCTELISQKQMAVEGYK 379
PVAVAE+KAKRKAKKL G+ +S+ + D + TEL+S KQMA+EGYK
Sbjct: 203 PVAVAESKAKRKAKKLKGSRG--------VNSNAQKTDAGSNSSTTELLSHKQMAIEGYK 262
Query: 380 AQSEMVIDSLDRLITAWEERKESVVVEGVHLSLNFVMGLMKKHPSIVPFMIYITNEDKHL 439
AQSEMVIDSLDRLIT WEER ESVVVEGVHLSLNFVMGLMKKHPSIVPFM+YI NE+KHL
Sbjct: 263 AQSEMVIDSLDRLITTWEERNESVVVEGVHLSLNFVMGLMKKHPSIVPFMVYIANEEKHL 322
Query: 440 ERFAVRAKYMTLDPAKNKYVKYIRNIRTIQEYLCKRADKHLIPKINNTNVDKSVAAIHAT 499
ERFAVRAKYMTLDPAKNKYVKYIRNIRTIQ+YLCKRADKHL+PKINNTNVDKSVA IHAT
Sbjct: 323 ERFAVRAKYMTLDPAKNKYVKYIRNIRTIQDYLCKRADKHLVPKINNTNVDKSVATIHAT 382
Query: 500 VFSCLRRRESGEQLYDPVRNTVPVIDEEYRNQCAANSLSSKCMFQLIQRKGSSRNLMAMV 559
VF CLRRRE+GE+LYD NTV VID+E+RNQCAANSL+SK MFQ+IQR+GSSR MA+
Sbjct: 383 VFGCLRRRETGEKLYDTTTNTVSVIDDEHRNQCAANSLTSKGMFQVIQRQGSSRRFMALC 442
Query: 560 NTDGSVAKAWPVDTIGDTNGKRLLDPRAENGVGIPMYGPLQIDKAEPVNLQFGFYGISAW 619
NTDG+VAK WPV ++G K +++ ++G Q+ KAEPVNLQFG +GISAW
Sbjct: 443 NTDGTVAKTWPVASVGKIR-KPVVNTEMDDGT------EHQLHKAEPVNLQFGHFGISAW 502
Query: 620 PTDAGGTSRAGSVDESRADGTDT-SKYLSSCCSSPRFSDGPSKELKEDISVHGSDEE--- 679
P+D G TS AGSVD+ RAD +T S++ SSCCSSPR SDGPSKEL E+ SV+GSDE+
Sbjct: 503 PSD-GATSHAGSVDDLRADIIETGSRHYSSCCSSPRTSDGPSKELMEEQSVNGSDEDDEE 562
Query: 680 -ADDPQELGSDEDFSEDGDIEIHEEEGSVDEESTKSDEEYDDLAMLDMNDGSWSGGDDME 739
DD E SDED S++ D +E GSVDEESTKSDEEYDDLAM D + W+ ++ E
Sbjct: 563 GDDDFHEPDSDEDLSDNNDERNRDEIGSVDEESTKSDEEYDDLAMEDKS--YWTDNEEEE 622
Query: 740 YMEKAGSVSKGQ----TSARAVDKYRQNLDHFLLSKSES-SNSLCLYSSHVKEKERNVRT 799
+ VS+ + DKY QNLD FL + ++ + SL L S + V
Sbjct: 623 SRDTISMVSQNNHNEASKTNKDDKYSQNLDLFLKTTNQPLTESLELTSEY--RNRMGVAA 682
Query: 800 SGSLKMKKRSLSIPAVRKQGSAIDGPILS 819
S KM+KRSLSIP V K GS ID IL+
Sbjct: 683 SDKAKMRKRSLSIPPVGKHGSIIDDQILA 691
BLAST of CmaCh02G013940 vs. TAIR 10
Match:
AT5G61450.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )
HSP 1 Score: 43.9 bits (102), Expect = 7.3e-04
Identity = 26/98 (26.53%), Postives = 48/98 (48.98%), Query Frame = 0
Query: 249 RIRERKESVTVLLCGTSGCGKSTLSALLGSRLGITTVISTDSIRHMMRSFVDEK-QNPLL 308
+ ++ + +L+CGT+ GKST++ L RL + V+ TD + ++R+ D + +
Sbjct: 140 KFHHQRVPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTATDAPLTSTPV 199
Query: 309 WASTYHAGEYLDPVAVAEAKAKRKAKKLAGNTHSYLKD 346
W + + E L E + RK L G+ +KD
Sbjct: 200 WTREFGSSEELITEFCRECRIVRKG--LGGDLKKAMKD 235
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9FJH9 | 1.7e-236 | 63.60 | P-loop NTPase domain-containing protein LPA1 homolog 1 OS=Arabidopsis thaliana O... | [more] |
Q93ZS1 | 4.3e-235 | 63.28 | P-loop NTPase domain-containing protein LPA1 homolog 2 OS=Arabidopsis thaliana O... | [more] |
B9F4I8 | 5.8e-216 | 64.98 | P-loop NTPase domain-containing protein LPA1 OS=Oryza sativa subsp. japonica OX=... | [more] |
Q651A1 | 1.2e-205 | 57.32 | P-loop NTPase domain-containing protein LPA1 homolog OS=Oryza sativa subsp. japo... | [more] |
Q8T1P1 | 9.7e-78 | 36.83 | Uncharacterized protein DDB_G0273453/DDB_G0273565 OS=Dictyostelium discoideum OX... | [more] |
Match Name | E-value | Identity | Description | |
AT5G60760.1 | 1.2e-237 | 63.60 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | [more] |
AT3G45090.1 | 3.1e-236 | 63.28 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | [more] |
AT3G45090.2 | 2.4e-217 | 66.93 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | [more] |
AT5G61450.1 | 7.3e-04 | 26.53 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | [more] |