Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCCCATTCCTTCAATGTCCATAAATACGCTCAGCCTCTCAATTCTTCTCTCACAAGTCACAACCCATTTCCTTATTTTCTAATTTTGTGATCTTTTCTTCAAGCTTCTTCTCCTCTGTCTTCAAAGATTCTTGCAGGCACAACGCGGGATCTTCACTTTAGATTTGCAGAGTAGCAACAATGGCGTCCCAGAACAGAGTAGATCTGGACGGCAACCCGATTAAGCCGATCACCATTTGCATGATTGGCGCTGGTGGGTTCATTGGCTCTCACCTTTGTGAGAAGCTCATGGCTGAAACCCCTCACAAGGTGCTTGCTCTTGATGTTTACAATGACAAGATTAAGCACCTTCTTGAGCCCGATTCCCTACCCTGGGCCGATCGCATCCAGTTCCACCGTCTCAATATCAAGAACGATTCCAGGCTCGAGAGTCTCGTTCGAATGGCAGATCTGGTTCGACTCTTGTGATTCCTTCGCTTTTCAATATTCATTCTTCTTGAAGAATTGTTCATTTCTTGTTCTGTGTAGTTTGAAGAATTGGTTCTTCTTTGGGTTTATTGTTAGTTCTGTGCTAATGCTCGTTCTTGTTCTTGCGGGTTTTGTCATTAAATTTGTGTTTTATGAGATGTTTTGTGATTGGAATCTTTCTTTGCGTGATGCAGACGATAAATCTTGCTGCGATCTGTACACCGGCGGACTACAATACGCGACCACTTGATACCATTTACAGCAATTTCATCGACGCAATTCCTGTGGTGTGTACGCGATTTGTTCATCTTTTTCTTTCTTGATATTTTTACTTCTTAATTCAAAGGATTAGGTTATCGTTTGATTTGATTTTATGTGCTCTCTTTTCGAAGGTTAAATACTGTTCTGGCAACAACAAGCGTCTCATTCACTTTTCAACTTGCGAAGTCTATGGTAAGACAATTGGAAGCTTTCTTCCAAAAGATAGCCCTCTTCGTCAGGTAAGGCATCTCTTTCTACATTCTTTTTCCTCTTATTATAAATTGCATCAATTCATTTGATCTATATTCATTTTCCTTACTCTTTCGATGGAATTGCTATGAATATGTACTCTGGAGATTCAATAGGTGTGCCGTTTTGTTTCAATTTTCTCCCTCGTTTCGGAATTTTCTTTGAATCGCAATGGAAGATTTGCAGGATTTGACTTGAAATGAGAGTATAAACATGTTGCAGTAAGAAAAATCTATTAGATCTTTAAATTGAACCGTCATTGCCCCTTCACAAATGATTGAAAATTCTATACAACATATCTTGGTTTGCATGAGGATGTGGATTTCTGTATTCTTTGATCAACAGTTTGGTTGAAATGTAGATTACAACCGACATTCTAGTCGTTGAGTTTGCCATGAAACTAGTTTCCAGATTGAAATAATTCTCTGATTTGAAAATTACATGTTCATAGATGACAGCGATTTCTAATGCTACTTTTTCATCGCATCCTTACATGATAGCCTAATTGTCGAGAATGAGCTGAACCATTGTATTGTAATTTCTCTATGATAGGATCCGGCATATTATGTTTTGAGTGAGGATGCTTCTCCTTGCATCTTCGGTCCCATTGAGAAGCAAAGATGGTCGTATGCATGTGCGAAACAATTGATTGAGAGGCTGATTTATGGTTAGTTTTCTTGTGTACTCTGTTGCTTCATGGGAATCAATACTTGGAAACTGCAGTTCTTCTTAGCCTTTGTTCTTTCCCAGCTGAGGGTGCTGAAAATGGGATGGATTTTACAATTGTAAGACCATTCAACTGGATCGGACCAAGGATGGACTTCATTCCTGGCATTGATGGCCCAAGTGAGGGCGTTCCCAGGGTTCTAGCTTGCTTTAGCAATGTATGTTCTGTTAATTTGCTTCTTTGGCTTCCAGTTTGTTTCAGACTCATGACTGTGTTTCCTTTTATGATATTATGTAGAATCTCCTTCGACACGAGCCACTGAAGCTTGTGGATGGCGGTCAATCCCAAAGAACATTCATATACATTAAGGATGCCATTGAAGCTGTTCTTTTGATGATTGTATGACTTGCTTACCTTCTGTTTTTCTTTCTTCTTCAACCTAAAGTTTGAAGCAGACATATCTGAATTGTTGTGTATTTTTGTTCAGGAAAACCCAGCGAGGGCCAATGGCCATATCTTCAATGTGGGCAACCCCAACAATGAAGTAACAGTGAAGCAGCTTGCTGAAATGATGACCAAGGTGGCAAATCGTGTCTGCTTTTAAAATTTCTATTATTATTATTATTTGCTATTGTTGGATGAAGAAAGTTTAAGTTGCTTGCTTTTGCACTCGTGCAGGTTTATGCAAAGGTAAGCGGGGAACCTTCGCTTGAGACCCCGACAATCGATATAAGCTCTGAAGAATTCTATGGCGTGGGCTATGACGACAGTGATAAGAGAATTCCTGACATGACCATCATCAACAAGCAACTCGGTATGATGCACATCTCGTTTCGTATTTTCCTTCCATCTCTGAATAGCGATCTTAATAAACTTGCACAAATATTTAACGTATTTTCCTTCAGGTTGGAATCCGAAGACATCGCTCTGGGACCTGCTGGAATCGACTTTGACCTACCAACATCGAACATACGCAGAGGCAGTGAAGCAGGCAACATCAAAACCAGCTGCATCTAGCTAGGTAGAGAGAGTGATGATGATGCTCTTACAGTGGAGTTTTATTTGTATTCTTTTCTGAGATTATAAGTATATGTTGATGGATGAGAATCCCACATTGGTAACATTTTTTTTTTGTTCTTGATTTTGAAATGTGTTAGTTGTGGTGGGGATAGGCGAAGAATGTGTAGTAGTAGCAGTGTACGCCCTGTCGGGGGGAAGACTCGGTGATATATGTAAAATGATTGAATTTCAAGCTTGGACTACTATAAGTCCAAGGGAGAATACAAGTAAAATCTACTACGTTTCTGTCTTTTACTTTCCCTTCTTTGCCATTGCATTTCTGG
mRNA sequence
ATTCCCATTCCTTCAATGTCCATAAATACGCTCAGCCTCTCAATTCTTCTCTCACAAGTCACAACCCATTTCCTTATTTTCTAATTTTGTGATCTTTTCTTCAAGCTTCTTCTCCTCTGTCTTCAAAGATTCTTGCAGGCACAACGCGGGATCTTCACTTTAGATTTGCAGAGTAGCAACAATGGCGTCCCAGAACAGAGTAGATCTGGACGGCAACCCGATTAAGCCGATCACCATTTGCATGATTGGCGCTGGTGGGTTCATTGGCTCTCACCTTTGTGAGAAGCTCATGGCTGAAACCCCTCACAAGGTGCTTGCTCTTGATGTTTACAATGACAAGATTAAGCACCTTCTTGAGCCCGATTCCCTACCCTGGGCCGATCGCATCCAGTTCCACCGTCTCAATATCAAGAACGATTCCAGGCTCGAGAGTCTCGTTCGAATGGCAGATCTGACGATAAATCTTGCTGCGATCTGTACACCGGCGGACTACAATACGCGACCACTTGATACCATTTACAGCAATTTCATCGACGCAATTCCTGTGGTTAAATACTGTTCTGGCAACAACAAGCGTCTCATTCACTTTTCAACTTGCGAAGTCTATGGTAAGACAATTGGAAGCTTTCTTCCAAAAGATAGCCCTCTTCGTCAGGATCCGGCATATTATGTTTTGAGTGAGGATGCTTCTCCTTGCATCTTCGGTCCCATTGAGAAGCAAAGATGGTCGTATGCATGTGCGAAACAATTGATTGAGAGGCTGATTTATGCTGAGGGTGCTGAAAATGGGATGGATTTTACAATTGTAAGACCATTCAACTGGATCGGACCAAGGATGGACTTCATTCCTGGCATTGATGGCCCAAGTGAGGGCGTTCCCAGGGTTCTAGCTTGCTTTAGCAATAATCTCCTTCGACACGAGCCACTGAAGCTTGTGGATGGCGGTCAATCCCAAAGAACATTCATATACATTAAGGATGCCATTGAAGCTGTTCTTTTGATGATTGAAAACCCAGCGAGGGCCAATGGCCATATCTTCAATGTGGGCAACCCCAACAATGAAGTAACAGTGAAGCAGCTTGCTGAAATGATGACCAAGGTTTATGCAAAGGTAAGCGGGGAACCTTCGCTTGAGACCCCGACAATCGATATAAGCTCTGAAGAATTCTATGGCGTGGGCTATGACGACAGTGATAAGAGAATTCCTGACATGACCATCATCAACAAGCAACTCGGTTGGAATCCGAAGACATCGCTCTGGGACCTGCTGGAATCGACTTTGACCTACCAACATCGAACATACGCAGAGGCAGTGAAGCAGGCAACATCAAAACCAGCTGCATCTAGCTAGGTAGAGAGAGTGATGATGATGCTCTTACAGTGGAGTTTTATTTGTATTCTTTTCTGAGATTATAAGTATATGTTGATGGATGAGAATCCCACATTGGTAACATTTTTTTTTTGTTCTTGATTTTGAAATGTGTTAGTTGTGGTGGGGATAGGCGAAGAATGTGTAGTAGTAGCAGTGTACGCCCTGTCGGGGGGAAGACTCGGTGATATATGTAAAATGATTGAATTTCAAGCTTGGACTACTATAAGTCCAAGGGAGAATACAAGTAAAATCTACTACGTTTCTGTCTTTTACTTTCCCTTCTTTGCCATTGCATTTCTGG
Coding sequence (CDS)
ATGGCGTCCCAGAACAGAGTAGATCTGGACGGCAACCCGATTAAGCCGATCACCATTTGCATGATTGGCGCTGGTGGGTTCATTGGCTCTCACCTTTGTGAGAAGCTCATGGCTGAAACCCCTCACAAGGTGCTTGCTCTTGATGTTTACAATGACAAGATTAAGCACCTTCTTGAGCCCGATTCCCTACCCTGGGCCGATCGCATCCAGTTCCACCGTCTCAATATCAAGAACGATTCCAGGCTCGAGAGTCTCGTTCGAATGGCAGATCTGACGATAAATCTTGCTGCGATCTGTACACCGGCGGACTACAATACGCGACCACTTGATACCATTTACAGCAATTTCATCGACGCAATTCCTGTGGTTAAATACTGTTCTGGCAACAACAAGCGTCTCATTCACTTTTCAACTTGCGAAGTCTATGGTAAGACAATTGGAAGCTTTCTTCCAAAAGATAGCCCTCTTCGTCAGGATCCGGCATATTATGTTTTGAGTGAGGATGCTTCTCCTTGCATCTTCGGTCCCATTGAGAAGCAAAGATGGTCGTATGCATGTGCGAAACAATTGATTGAGAGGCTGATTTATGCTGAGGGTGCTGAAAATGGGATGGATTTTACAATTGTAAGACCATTCAACTGGATCGGACCAAGGATGGACTTCATTCCTGGCATTGATGGCCCAAGTGAGGGCGTTCCCAGGGTTCTAGCTTGCTTTAGCAATAATCTCCTTCGACACGAGCCACTGAAGCTTGTGGATGGCGGTCAATCCCAAAGAACATTCATATACATTAAGGATGCCATTGAAGCTGTTCTTTTGATGATTGAAAACCCAGCGAGGGCCAATGGCCATATCTTCAATGTGGGCAACCCCAACAATGAAGTAACAGTGAAGCAGCTTGCTGAAATGATGACCAAGGTTTATGCAAAGGTAAGCGGGGAACCTTCGCTTGAGACCCCGACAATCGATATAAGCTCTGAAGAATTCTATGGCGTGGGCTATGACGACAGTGATAAGAGAATTCCTGACATGACCATCATCAACAAGCAACTCGGTTGGAATCCGAAGACATCGCTCTGGGACCTGCTGGAATCGACTTTGACCTACCAACATCGAACATACGCAGAGGCAGTGAAGCAGGCAACATCAAAACCAGCTGCATCTAGCTAG
Protein sequence
MASQNRVDLDGNPIKPITICMIGAGGFIGSHLCEKLMAETPHKVLALDVYNDKIKHLLEPDSLPWADRIQFHRLNIKNDSRLESLVRMADLTINLAAICTPADYNTRPLDTIYSNFIDAIPVVKYCSGNNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLSEDASPCIFGPIEKQRWSYACAKQLIERLIYAEGAENGMDFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRHEPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVKQLAEMMTKVYAKVSGEPSLETPTIDISSEEFYGVGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHRTYAEAVKQATSKPAASS
Homology
BLAST of CmaCh02G013630 vs. ExPASy Swiss-Prot
Match:
Q9SGE0 (UDP-D-apiose/UDP-D-xylose synthase 2 OS=Arabidopsis thaliana OX=3702 GN=AXS2 PE=2 SV=1)
HSP 1 Score: 733.4 bits (1892), Expect = 1.3e-210
Identity = 342/384 (89.06%), Postives = 367/384 (95.57%), Query Frame = 0
Query: 5 NRVDLDGNPIKPITICMIGAGGFIGSHLCEKLMAETPHKVLALDVYNDKIKHLLEPDSLP 64
+R+DLDG PIKP+TICMIGAGGFIGSHLCEKLM ETPHKVLALDVYNDKIKHLLEPD++
Sbjct: 6 DRLDLDGKPIKPMTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVQ 65
Query: 65 WADRIQFHRLNIKNDSRLESLVRMADLTINLAAICTPADYNTRPLDTIYSNFIDAIPVVK 124
WA RIQFHR+NIK+DSRLE L++MADLTINLAAICTPADYNTRPLDTIYSNFIDA+PVVK
Sbjct: 66 WAGRIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVK 125
Query: 125 YCSGNNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLSEDASPCIFGPIEKQRWSY 184
YCS NNKRLIHFSTCEVYGKTIGSFLPKD PLRQDP +YVL ED SPCIFG IEKQRWSY
Sbjct: 126 YCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPEFYVLKEDISPCIFGSIEKQRWSY 185
Query: 185 ACAKQLIERLIYAEGAENGMDFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 244
ACAKQLIERL+YAEGAENG++FTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL
Sbjct: 186 ACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 245
Query: 245 RHEPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVKQLAEMM 304
R EPLKLVDGG+SQRTFIYIKDAIEAVLLMIENP RANGHIFNVGNPNNEVTV+QLAEMM
Sbjct: 246 RREPLKLVDGGESQRTFIYIKDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQLAEMM 305
Query: 305 TKVYAKVSGEPSLETPTIDISSEEFYGVGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLE 364
T+VYAKVSGE ++E+PTID+SS+EFYG GYDDSDKRIPDMTIIN+QLGWNPKTSLWDLLE
Sbjct: 306 TEVYAKVSGETAIESPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLLE 365
Query: 365 STLTYQHRTYAEAVKQATSKPAAS 389
STLTYQH TYAEA+K+ATSKP AS
Sbjct: 366 STLTYQHTTYAEAIKKATSKPVAS 389
BLAST of CmaCh02G013630 vs. ExPASy Swiss-Prot
Match:
Q9ZUY6 (UDP-D-apiose/UDP-D-xylose synthase 1 OS=Arabidopsis thaliana OX=3702 GN=AXS1 PE=1 SV=1)
HSP 1 Score: 730.7 bits (1885), Expect = 8.6e-210
Identity = 340/384 (88.54%), Postives = 366/384 (95.31%), Query Frame = 0
Query: 5 NRVDLDGNPIKPITICMIGAGGFIGSHLCEKLMAETPHKVLALDVYNDKIKHLLEPDSLP 64
NRVDLDG PI+P+TICMIGAGGFIGSHLCEKL+ ETPHKVLALDVYNDKIKHLLEPD++
Sbjct: 6 NRVDLDGKPIQPLTICMIGAGGFIGSHLCEKLLTETPHKVLALDVYNDKIKHLLEPDTVE 65
Query: 65 WADRIQFHRLNIKNDSRLESLVRMADLTINLAAICTPADYNTRPLDTIYSNFIDAIPVVK 124
W+ RIQFHR+NIK+DSRLE LV+MADL INLAAICTPADYNTRPLDTIYSNFIDA+PVVK
Sbjct: 66 WSGRIQFHRINIKHDSRLEGLVKMADLIINLAAICTPADYNTRPLDTIYSNFIDALPVVK 125
Query: 125 YCSGNNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLSEDASPCIFGPIEKQRWSY 184
YCS NNKRLIHFSTCEVYGKTIGSFLPKD PLR DPA+YVL ED SPCIFG IEKQRWSY
Sbjct: 126 YCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRDDPAFYVLKEDISPCIFGSIEKQRWSY 185
Query: 185 ACAKQLIERLIYAEGAENGMDFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 244
ACAKQLIERL+YAEGAENG++FTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL
Sbjct: 186 ACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 245
Query: 245 RHEPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVKQLAEMM 304
R EPLKLVDGG+SQRTF+YI DAIEAVLLMIENP RANGHIFNVGNPNNEVTV+QLAEMM
Sbjct: 246 RREPLKLVDGGESQRTFVYINDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQLAEMM 305
Query: 305 TKVYAKVSGEPSLETPTIDISSEEFYGVGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLE 364
T+VYAKVSGE ++E+PT+D+SS+EFYG GYDDSDKRIPDMTIIN+QLGWNPKTSLWDLLE
Sbjct: 306 TEVYAKVSGEGAIESPTVDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLLE 365
Query: 365 STLTYQHRTYAEAVKQATSKPAAS 389
STLTYQHRTYAEAVK+ATSKP AS
Sbjct: 366 STLTYQHRTYAEAVKKATSKPVAS 389
BLAST of CmaCh02G013630 vs. ExPASy Swiss-Prot
Match:
Q8S9Z2 (UDP-D-apiose/UDP-D-xylose synthase OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0969100 PE=2 SV=1)
HSP 1 Score: 677.6 bits (1747), Expect = 8.6e-194
Identity = 320/384 (83.33%), Postives = 349/384 (90.89%), Query Frame = 0
Query: 6 RVDLDGNPIKPITICMIGAGGFIGSHLCEKLMAETPHKVLALDVYNDKIKHLLEPDSLPW 65
R+DLDGNPI P+TICMIGAGGFIGSHLCEKLMAET H V A+DVY DKI+HL++P
Sbjct: 15 RLDLDGNPIAPLTICMIGAGGFIGSHLCEKLMAETAHVVYAVDVYCDKIRHLVDPAPPHL 74
Query: 66 ADRIQFHRLNIKNDSRLESLVRMADLTINLAAICTPADYNTRPLDTIYSNFIDAIPVVKY 125
RI FHRLNIKNDSRLE L++MADLTINLAAICTPADYNTRPLDTIYSNFIDA+PVVKY
Sbjct: 75 HGRISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 134
Query: 126 CSGNNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLSEDASPCIFGPIEKQRWSYA 185
CS NNKRLIHFSTCEVYGKTIGSFLP D PLR++P +YVL ED SPCIFGPI KQRWSYA
Sbjct: 135 CSENNKRLIHFSTCEVYGKTIGSFLPTDHPLRKEPEFYVLKEDESPCIFGPIVKQRWSYA 194
Query: 186 CAKQLIERLIYAEGAENGMDFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 245
CAKQLIERLI+AEGAENG++FTIVRPFNWIGPRMDFIPG+DGPSEGVPRVLACFSNNLLR
Sbjct: 195 CAKQLIERLIFAEGAENGLEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLR 254
Query: 246 HEPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVKQLAEMMT 305
EPLKLVDGGQSQRTF+YIKDAIEAV LMIENPARANG IFNVGNPNNEVTV+QLAEMMT
Sbjct: 255 REPLKLVDGGQSQRTFVYIKDAIEAVHLMIENPARANGQIFNVGNPNNEVTVRQLAEMMT 314
Query: 306 KVYAKVSGEPSLETPTIDISSEEFYGVGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLES 365
+VYA VSGEP L+ P ID+SS++FYG GYDDSDKRIPDMTIINKQLGWNPKT L DLLE+
Sbjct: 315 EVYANVSGEPPLDEPMIDVSSKQFYGEGYDDSDKRIPDMTIINKQLGWNPKTPLKDLLET 374
Query: 366 TLTYQHRTYAEAVKQATSKPAASS 390
TLTYQH+TY EA+K+ S+ +ASS
Sbjct: 375 TLTYQHKTYKEAIKRQMSQASASS 398
BLAST of CmaCh02G013630 vs. ExPASy Swiss-Prot
Match:
A6TF98 (Bifunctional polymyxin resistance protein ArnA OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) OX=272620 GN=arnA PE=3 SV=1)
HSP 1 Score: 226.9 bits (577), Expect = 4.0e-58
Identity = 121/359 (33.70%), Postives = 192/359 (53.48%), Query Frame = 0
Query: 19 ICMIGAGGFIGSHLCEKLMAETPHKVLALDVYNDKIKHLLEPDSLPWADRIQFHRLNIKN 78
+ ++G GFIG+HL E+L+ + +++ LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNYEIYGLDIGSDAISRFLD------CPRFHFVEGDISI 377
Query: 79 DSR-LESLVRMADLTINLAAICTPADYNTRPLDTIYSNFIDAIPVVKYCSGNNKRLIHFS 138
S +E ++ D+ + L AI TP +Y PL +F + + +++ C NKR+I S
Sbjct: 378 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYNKRIIFPS 437
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLSEDASPCIFGPIEKQRWSYACAKQLIERLIYA 198
T EVYG ED+S + GPI KQRW Y+ +KQL++R+I+A
Sbjct: 438 TSEVYGMCTDK---------------NFDEDSSNLVVGPINKQRWIYSVSKQLLDRVIWA 497
Query: 199 EGAENGMDFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRHEPLKLVDGGQS 258
G +NG+ FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 498 YGDKNGLKFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 557
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPNNEVTVKQLAEMMTKVYAKVSGEPS 318
+R F I D IEA+ +IEN R +G I N+GNP+NE ++K+LAEM+ + +
Sbjct: 558 KRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPDNEASIKELAEMLLACFERHPLRDR 617
Query: 319 LE--TPTIDISSEEFYGVGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHRT 374
++ S ++YG GY D + R P + + L W PK + + +E TL + RT
Sbjct: 618 FPPFAGFREVESSDYYGKGYQDVEHRKPSIRNAKRCLNWEPKVEMEETVEHTLDFFLRT 652
BLAST of CmaCh02G013630 vs. ExPASy Swiss-Prot
Match:
A1JPN5 (Bifunctional polymyxin resistance protein ArnA OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081) OX=393305 GN=arnA PE=3 SV=1)
HSP 1 Score: 223.8 bits (569), Expect = 3.4e-57
Identity = 124/357 (34.73%), Postives = 191/357 (53.50%), Query Frame = 0
Query: 19 ICMIGAGGFIGSHLCEKLMAETPHKVLALDVYNDKIKHLLEPDSLPWAD-RIQFHRLNIK 78
+ ++G GFIG+HL E+L+ + ++V LD+ +D I L+ + + + I H
Sbjct: 318 VLILGVNGFIGNHLTERLLRDNRYEVYGLDIGSDAICRFLDNPNFHFVEGDISIH----- 377
Query: 79 NDSRLESLVRMADLTINLAAICTPADYNTRPLDTIYSNFIDAIPVVKYCSGNNKRLIHFS 138
+E ++ D+ + L AI TP +Y PL +F + + +V+ C NKR++ S
Sbjct: 378 -SEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIVFPS 437
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLSEDASPCIFGPIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED+S I GPI KQRW Y+ +KQL++R+I+A
Sbjct: 438 TSEVYG------------MCDDKEF---DEDSSRLIVGPINKQRWIYSVSKQLLDRVIWA 497
Query: 199 EGAENGMDFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRHEPLKLVDGGQS 258
GA+ + FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG+
Sbjct: 498 YGAKENLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLVDGGEQ 557
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPNNEVTVKQLAEMMTKVYAKVSGEPS 318
+R F I D IEA+ +IEN +G I N+GNP NE ++++LAEM+ + + K E
Sbjct: 558 KRCFTDIHDGIEALFRIIENRDGACDGQIINIGNPTNEASIRELAEMLLRCFEK--HELR 617
Query: 319 LETPTI----DISSEEFYGVGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTY 370
P DI S +YG GY D + R P + + L W P+ +L + TL +
Sbjct: 618 HNFPPFAGFKDIESSAYYGKGYQDVEYRTPSIRNARRILDWQPEIALEQTVMETLDF 648
BLAST of CmaCh02G013630 vs. TAIR 10
Match:
AT1G08200.1 (UDP-D-apiose/UDP-D-xylose synthase 2 )
HSP 1 Score: 733.4 bits (1892), Expect = 9.4e-212
Identity = 342/384 (89.06%), Postives = 367/384 (95.57%), Query Frame = 0
Query: 5 NRVDLDGNPIKPITICMIGAGGFIGSHLCEKLMAETPHKVLALDVYNDKIKHLLEPDSLP 64
+R+DLDG PIKP+TICMIGAGGFIGSHLCEKLM ETPHKVLALDVYNDKIKHLLEPD++
Sbjct: 6 DRLDLDGKPIKPMTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVQ 65
Query: 65 WADRIQFHRLNIKNDSRLESLVRMADLTINLAAICTPADYNTRPLDTIYSNFIDAIPVVK 124
WA RIQFHR+NIK+DSRLE L++MADLTINLAAICTPADYNTRPLDTIYSNFIDA+PVVK
Sbjct: 66 WAGRIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVK 125
Query: 125 YCSGNNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLSEDASPCIFGPIEKQRWSY 184
YCS NNKRLIHFSTCEVYGKTIGSFLPKD PLRQDP +YVL ED SPCIFG IEKQRWSY
Sbjct: 126 YCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPEFYVLKEDISPCIFGSIEKQRWSY 185
Query: 185 ACAKQLIERLIYAEGAENGMDFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 244
ACAKQLIERL+YAEGAENG++FTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL
Sbjct: 186 ACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 245
Query: 245 RHEPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVKQLAEMM 304
R EPLKLVDGG+SQRTFIYIKDAIEAVLLMIENP RANGHIFNVGNPNNEVTV+QLAEMM
Sbjct: 246 RREPLKLVDGGESQRTFIYIKDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQLAEMM 305
Query: 305 TKVYAKVSGEPSLETPTIDISSEEFYGVGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLE 364
T+VYAKVSGE ++E+PTID+SS+EFYG GYDDSDKRIPDMTIIN+QLGWNPKTSLWDLLE
Sbjct: 306 TEVYAKVSGETAIESPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLLE 365
Query: 365 STLTYQHRTYAEAVKQATSKPAAS 389
STLTYQH TYAEA+K+ATSKP AS
Sbjct: 366 STLTYQHTTYAEAIKKATSKPVAS 389
BLAST of CmaCh02G013630 vs. TAIR 10
Match:
AT2G27860.1 (UDP-D-apiose/UDP-D-xylose synthase 1 )
HSP 1 Score: 730.7 bits (1885), Expect = 6.1e-211
Identity = 340/384 (88.54%), Postives = 366/384 (95.31%), Query Frame = 0
Query: 5 NRVDLDGNPIKPITICMIGAGGFIGSHLCEKLMAETPHKVLALDVYNDKIKHLLEPDSLP 64
NRVDLDG PI+P+TICMIGAGGFIGSHLCEKL+ ETPHKVLALDVYNDKIKHLLEPD++
Sbjct: 6 NRVDLDGKPIQPLTICMIGAGGFIGSHLCEKLLTETPHKVLALDVYNDKIKHLLEPDTVE 65
Query: 65 WADRIQFHRLNIKNDSRLESLVRMADLTINLAAICTPADYNTRPLDTIYSNFIDAIPVVK 124
W+ RIQFHR+NIK+DSRLE LV+MADL INLAAICTPADYNTRPLDTIYSNFIDA+PVVK
Sbjct: 66 WSGRIQFHRINIKHDSRLEGLVKMADLIINLAAICTPADYNTRPLDTIYSNFIDALPVVK 125
Query: 125 YCSGNNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLSEDASPCIFGPIEKQRWSY 184
YCS NNKRLIHFSTCEVYGKTIGSFLPKD PLR DPA+YVL ED SPCIFG IEKQRWSY
Sbjct: 126 YCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRDDPAFYVLKEDISPCIFGSIEKQRWSY 185
Query: 185 ACAKQLIERLIYAEGAENGMDFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 244
ACAKQLIERL+YAEGAENG++FTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL
Sbjct: 186 ACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 245
Query: 245 RHEPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVKQLAEMM 304
R EPLKLVDGG+SQRTF+YI DAIEAVLLMIENP RANGHIFNVGNPNNEVTV+QLAEMM
Sbjct: 246 RREPLKLVDGGESQRTFVYINDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQLAEMM 305
Query: 305 TKVYAKVSGEPSLETPTIDISSEEFYGVGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLE 364
T+VYAKVSGE ++E+PT+D+SS+EFYG GYDDSDKRIPDMTIIN+QLGWNPKTSLWDLLE
Sbjct: 306 TEVYAKVSGEGAIESPTVDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLLE 365
Query: 365 STLTYQHRTYAEAVKQATSKPAAS 389
STLTYQHRTYAEAVK+ATSKP AS
Sbjct: 366 STLTYQHRTYAEAVKKATSKPVAS 389
BLAST of CmaCh02G013630 vs. TAIR 10
Match:
AT3G46440.1 (UDP-XYL synthase 5 )
HSP 1 Score: 117.1 bits (292), Expect = 3.2e-26
Identity = 96/343 (27.99%), Postives = 151/343 (44.02%), Query Frame = 0
Query: 19 ICMIGAGGFIGSHLCEKLMAETPHKVLALDVYNDKIKHLLEPDSLPWADRIQFHRLNIKN 78
I + G GFIGSHL +KLM ++V+ D Y K L+ W +F I++
Sbjct: 31 ILISGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLK----KWIGHPRFEL--IRH 90
Query: 79 DSRLESLVRMADLTINLAAICTPADYNTRPLDTIYSNFIDAIPVVKYCSGNNKRLIHFST 138
D E L+ D +LA +P Y P+ TI +N I + ++ R++ ST
Sbjct: 91 DV-TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 150
Query: 139 CEVYGKTIGSFLPKDSPLRQDPAYYVLSEDASPCIFGPIEK--QRWSYACAKQLIERLIY 198
EVYG D + P Y +G + R Y K++ E L++
Sbjct: 151 SEVYG---------DPLIHPQPESY----------WGNVNPIGVRSCYDEGKRVAETLMF 210
Query: 199 AEGAENGMDFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRHEPLKLVDGGQ 258
++G++ I R FN GPRM+ G RV++ F LR E L + G
Sbjct: 211 DYHRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFIAQALRGEALTVQKPGT 270
Query: 259 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVKQLAEMMTKVYAKVSGEPS 318
R+F Y+ D ++ ++ ++E N+GNP E T+ +LAE + ++ PS
Sbjct: 271 QTRSFCYVSDMVDGLMRLMEGDDTGP---INIGNP-GEFTMVELAETVKELI-----NPS 321
Query: 319 LETPTIDISSEEFYGVGYDDSDKRIPDMTIINKQLGWNPKTSL 360
+E ++ + DD +R PD+T + LGW PK L
Sbjct: 331 IEIKMVENTP--------DDPRQRKPDITKAKEVLGWEPKVKL 321
BLAST of CmaCh02G013630 vs. TAIR 10
Match:
AT3G46440.2 (UDP-XYL synthase 5 )
HSP 1 Score: 117.1 bits (292), Expect = 3.2e-26
Identity = 96/343 (27.99%), Postives = 151/343 (44.02%), Query Frame = 0
Query: 19 ICMIGAGGFIGSHLCEKLMAETPHKVLALDVYNDKIKHLLEPDSLPWADRIQFHRLNIKN 78
I + G GFIGSHL +KLM ++V+ D Y K L+ W +F I++
Sbjct: 31 ILISGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLK----KWIGHPRFEL--IRH 90
Query: 79 DSRLESLVRMADLTINLAAICTPADYNTRPLDTIYSNFIDAIPVVKYCSGNNKRLIHFST 138
D E L+ D +LA +P Y P+ TI +N I + ++ R++ ST
Sbjct: 91 DV-TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 150
Query: 139 CEVYGKTIGSFLPKDSPLRQDPAYYVLSEDASPCIFGPIEK--QRWSYACAKQLIERLIY 198
EVYG D + P Y +G + R Y K++ E L++
Sbjct: 151 SEVYG---------DPLIHPQPESY----------WGNVNPIGVRSCYDEGKRVAETLMF 210
Query: 199 AEGAENGMDFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRHEPLKLVDGGQ 258
++G++ I R FN GPRM+ G RV++ F LR E L + G
Sbjct: 211 DYHRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFIAQALRGEALTVQKPGT 270
Query: 259 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVKQLAEMMTKVYAKVSGEPS 318
R+F Y+ D ++ ++ ++E N+GNP E T+ +LAE + ++ PS
Sbjct: 271 QTRSFCYVSDMVDGLMRLMEGDDTGP---INIGNP-GEFTMVELAETVKELI-----NPS 321
Query: 319 LETPTIDISSEEFYGVGYDDSDKRIPDMTIINKQLGWNPKTSL 360
+E ++ + DD +R PD+T + LGW PK L
Sbjct: 331 IEIKMVENTP--------DDPRQRKPDITKAKEVLGWEPKVKL 321
BLAST of CmaCh02G013630 vs. TAIR 10
Match:
AT5G59290.1 (UDP-glucuronic acid decarboxylase 3 )
HSP 1 Score: 115.9 bits (289), Expect = 7.1e-26
Identity = 97/343 (28.28%), Postives = 153/343 (44.61%), Query Frame = 0
Query: 19 ICMIGAGGFIGSHLCEKLMAETPHKVLALDVYNDKIKHLLEPDSLPWADRIQFHRLNIKN 78
I + G GFIGSHL +KLM ++V+ D Y K L+ W +F I++
Sbjct: 32 ILISGGAGFIGSHLVDKLMENEKNEVVVADNYFTGSKENLK----KWIGHPRFEL--IRH 91
Query: 79 DSRLESLVRMADLTINLAAICTPADYNTRPLDTIYSNFIDAIPVVKYCSGNNKRLIHFST 138
D E L+ D +LA +P Y P+ TI +N I + ++ R++ ST
Sbjct: 92 DV-TEPLLIEVDRIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 151
Query: 139 CEVYGKTIGSFLPKDSPLRQDPAYYVLSEDASPCIFGPIEK--QRWSYACAKQLIERLIY 198
EVYG D + P Y +G + R Y K++ E L++
Sbjct: 152 SEVYG---------DPLIHPQPESY----------WGNVNPIGVRSCYDEGKRVAETLMF 211
Query: 199 AEGAENGMDFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRHEPLKLVDGGQ 258
++G++ I R FN GPRM+ G RV++ F LR E L + G
Sbjct: 212 DYHRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFIAQALRGEALTVQKPGT 271
Query: 259 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVKQLAEMMTKVYAKVSGEPS 318
R+F Y+ D ++ ++ ++E G I N+GNP E T+ +LAE + ++ PS
Sbjct: 272 QTRSFCYVSDMVDGLIRLME--GNDTGPI-NIGNP-GEFTMVELAETVKELI-----NPS 322
Query: 319 LETPTIDISSEEFYGVGYDDSDKRIPDMTIINKQLGWNPKTSL 360
+E ++ + DD +R PD++ + LGW PK L
Sbjct: 332 IEIKMVENTP--------DDPRQRKPDISKAKEVLGWEPKVKL 322
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9SGE0 | 1.3e-210 | 89.06 | UDP-D-apiose/UDP-D-xylose synthase 2 OS=Arabidopsis thaliana OX=3702 GN=AXS2 PE=... | [more] |
Q9ZUY6 | 8.6e-210 | 88.54 | UDP-D-apiose/UDP-D-xylose synthase 1 OS=Arabidopsis thaliana OX=3702 GN=AXS1 PE=... | [more] |
Q8S9Z2 | 8.6e-194 | 83.33 | UDP-D-apiose/UDP-D-xylose synthase OS=Oryza sativa subsp. japonica OX=39947 GN=O... | [more] |
A6TF98 | 4.0e-58 | 33.70 | Bifunctional polymyxin resistance protein ArnA OS=Klebsiella pneumoniae subsp. p... | [more] |
A1JPN5 | 3.4e-57 | 34.73 | Bifunctional polymyxin resistance protein ArnA OS=Yersinia enterocolitica seroty... | [more] |