CmaCh02G013630 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh02G013630
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUDP-D-apiose/UDP-D-xylose synthase 2
LocationCma_Chr02: 7955173 .. 7958161 (-)
RNA-Seq ExpressionCmaCh02G013630
SyntenyCmaCh02G013630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCCCATTCCTTCAATGTCCATAAATACGCTCAGCCTCTCAATTCTTCTCTCACAAGTCACAACCCATTTCCTTATTTTCTAATTTTGTGATCTTTTCTTCAAGCTTCTTCTCCTCTGTCTTCAAAGATTCTTGCAGGCACAACGCGGGATCTTCACTTTAGATTTGCAGAGTAGCAACAATGGCGTCCCAGAACAGAGTAGATCTGGACGGCAACCCGATTAAGCCGATCACCATTTGCATGATTGGCGCTGGTGGGTTCATTGGCTCTCACCTTTGTGAGAAGCTCATGGCTGAAACCCCTCACAAGGTGCTTGCTCTTGATGTTTACAATGACAAGATTAAGCACCTTCTTGAGCCCGATTCCCTACCCTGGGCCGATCGCATCCAGTTCCACCGTCTCAATATCAAGAACGATTCCAGGCTCGAGAGTCTCGTTCGAATGGCAGATCTGGTTCGACTCTTGTGATTCCTTCGCTTTTCAATATTCATTCTTCTTGAAGAATTGTTCATTTCTTGTTCTGTGTAGTTTGAAGAATTGGTTCTTCTTTGGGTTTATTGTTAGTTCTGTGCTAATGCTCGTTCTTGTTCTTGCGGGTTTTGTCATTAAATTTGTGTTTTATGAGATGTTTTGTGATTGGAATCTTTCTTTGCGTGATGCAGACGATAAATCTTGCTGCGATCTGTACACCGGCGGACTACAATACGCGACCACTTGATACCATTTACAGCAATTTCATCGACGCAATTCCTGTGGTGTGTACGCGATTTGTTCATCTTTTTCTTTCTTGATATTTTTACTTCTTAATTCAAAGGATTAGGTTATCGTTTGATTTGATTTTATGTGCTCTCTTTTCGAAGGTTAAATACTGTTCTGGCAACAACAAGCGTCTCATTCACTTTTCAACTTGCGAAGTCTATGGTAAGACAATTGGAAGCTTTCTTCCAAAAGATAGCCCTCTTCGTCAGGTAAGGCATCTCTTTCTACATTCTTTTTCCTCTTATTATAAATTGCATCAATTCATTTGATCTATATTCATTTTCCTTACTCTTTCGATGGAATTGCTATGAATATGTACTCTGGAGATTCAATAGGTGTGCCGTTTTGTTTCAATTTTCTCCCTCGTTTCGGAATTTTCTTTGAATCGCAATGGAAGATTTGCAGGATTTGACTTGAAATGAGAGTATAAACATGTTGCAGTAAGAAAAATCTATTAGATCTTTAAATTGAACCGTCATTGCCCCTTCACAAATGATTGAAAATTCTATACAACATATCTTGGTTTGCATGAGGATGTGGATTTCTGTATTCTTTGATCAACAGTTTGGTTGAAATGTAGATTACAACCGACATTCTAGTCGTTGAGTTTGCCATGAAACTAGTTTCCAGATTGAAATAATTCTCTGATTTGAAAATTACATGTTCATAGATGACAGCGATTTCTAATGCTACTTTTTCATCGCATCCTTACATGATAGCCTAATTGTCGAGAATGAGCTGAACCATTGTATTGTAATTTCTCTATGATAGGATCCGGCATATTATGTTTTGAGTGAGGATGCTTCTCCTTGCATCTTCGGTCCCATTGAGAAGCAAAGATGGTCGTATGCATGTGCGAAACAATTGATTGAGAGGCTGATTTATGGTTAGTTTTCTTGTGTACTCTGTTGCTTCATGGGAATCAATACTTGGAAACTGCAGTTCTTCTTAGCCTTTGTTCTTTCCCAGCTGAGGGTGCTGAAAATGGGATGGATTTTACAATTGTAAGACCATTCAACTGGATCGGACCAAGGATGGACTTCATTCCTGGCATTGATGGCCCAAGTGAGGGCGTTCCCAGGGTTCTAGCTTGCTTTAGCAATGTATGTTCTGTTAATTTGCTTCTTTGGCTTCCAGTTTGTTTCAGACTCATGACTGTGTTTCCTTTTATGATATTATGTAGAATCTCCTTCGACACGAGCCACTGAAGCTTGTGGATGGCGGTCAATCCCAAAGAACATTCATATACATTAAGGATGCCATTGAAGCTGTTCTTTTGATGATTGTATGACTTGCTTACCTTCTGTTTTTCTTTCTTCTTCAACCTAAAGTTTGAAGCAGACATATCTGAATTGTTGTGTATTTTTGTTCAGGAAAACCCAGCGAGGGCCAATGGCCATATCTTCAATGTGGGCAACCCCAACAATGAAGTAACAGTGAAGCAGCTTGCTGAAATGATGACCAAGGTGGCAAATCGTGTCTGCTTTTAAAATTTCTATTATTATTATTATTTGCTATTGTTGGATGAAGAAAGTTTAAGTTGCTTGCTTTTGCACTCGTGCAGGTTTATGCAAAGGTAAGCGGGGAACCTTCGCTTGAGACCCCGACAATCGATATAAGCTCTGAAGAATTCTATGGCGTGGGCTATGACGACAGTGATAAGAGAATTCCTGACATGACCATCATCAACAAGCAACTCGGTATGATGCACATCTCGTTTCGTATTTTCCTTCCATCTCTGAATAGCGATCTTAATAAACTTGCACAAATATTTAACGTATTTTCCTTCAGGTTGGAATCCGAAGACATCGCTCTGGGACCTGCTGGAATCGACTTTGACCTACCAACATCGAACATACGCAGAGGCAGTGAAGCAGGCAACATCAAAACCAGCTGCATCTAGCTAGGTAGAGAGAGTGATGATGATGCTCTTACAGTGGAGTTTTATTTGTATTCTTTTCTGAGATTATAAGTATATGTTGATGGATGAGAATCCCACATTGGTAACATTTTTTTTTTGTTCTTGATTTTGAAATGTGTTAGTTGTGGTGGGGATAGGCGAAGAATGTGTAGTAGTAGCAGTGTACGCCCTGTCGGGGGGAAGACTCGGTGATATATGTAAAATGATTGAATTTCAAGCTTGGACTACTATAAGTCCAAGGGAGAATACAAGTAAAATCTACTACGTTTCTGTCTTTTACTTTCCCTTCTTTGCCATTGCATTTCTGG

mRNA sequence

ATTCCCATTCCTTCAATGTCCATAAATACGCTCAGCCTCTCAATTCTTCTCTCACAAGTCACAACCCATTTCCTTATTTTCTAATTTTGTGATCTTTTCTTCAAGCTTCTTCTCCTCTGTCTTCAAAGATTCTTGCAGGCACAACGCGGGATCTTCACTTTAGATTTGCAGAGTAGCAACAATGGCGTCCCAGAACAGAGTAGATCTGGACGGCAACCCGATTAAGCCGATCACCATTTGCATGATTGGCGCTGGTGGGTTCATTGGCTCTCACCTTTGTGAGAAGCTCATGGCTGAAACCCCTCACAAGGTGCTTGCTCTTGATGTTTACAATGACAAGATTAAGCACCTTCTTGAGCCCGATTCCCTACCCTGGGCCGATCGCATCCAGTTCCACCGTCTCAATATCAAGAACGATTCCAGGCTCGAGAGTCTCGTTCGAATGGCAGATCTGACGATAAATCTTGCTGCGATCTGTACACCGGCGGACTACAATACGCGACCACTTGATACCATTTACAGCAATTTCATCGACGCAATTCCTGTGGTTAAATACTGTTCTGGCAACAACAAGCGTCTCATTCACTTTTCAACTTGCGAAGTCTATGGTAAGACAATTGGAAGCTTTCTTCCAAAAGATAGCCCTCTTCGTCAGGATCCGGCATATTATGTTTTGAGTGAGGATGCTTCTCCTTGCATCTTCGGTCCCATTGAGAAGCAAAGATGGTCGTATGCATGTGCGAAACAATTGATTGAGAGGCTGATTTATGCTGAGGGTGCTGAAAATGGGATGGATTTTACAATTGTAAGACCATTCAACTGGATCGGACCAAGGATGGACTTCATTCCTGGCATTGATGGCCCAAGTGAGGGCGTTCCCAGGGTTCTAGCTTGCTTTAGCAATAATCTCCTTCGACACGAGCCACTGAAGCTTGTGGATGGCGGTCAATCCCAAAGAACATTCATATACATTAAGGATGCCATTGAAGCTGTTCTTTTGATGATTGAAAACCCAGCGAGGGCCAATGGCCATATCTTCAATGTGGGCAACCCCAACAATGAAGTAACAGTGAAGCAGCTTGCTGAAATGATGACCAAGGTTTATGCAAAGGTAAGCGGGGAACCTTCGCTTGAGACCCCGACAATCGATATAAGCTCTGAAGAATTCTATGGCGTGGGCTATGACGACAGTGATAAGAGAATTCCTGACATGACCATCATCAACAAGCAACTCGGTTGGAATCCGAAGACATCGCTCTGGGACCTGCTGGAATCGACTTTGACCTACCAACATCGAACATACGCAGAGGCAGTGAAGCAGGCAACATCAAAACCAGCTGCATCTAGCTAGGTAGAGAGAGTGATGATGATGCTCTTACAGTGGAGTTTTATTTGTATTCTTTTCTGAGATTATAAGTATATGTTGATGGATGAGAATCCCACATTGGTAACATTTTTTTTTTGTTCTTGATTTTGAAATGTGTTAGTTGTGGTGGGGATAGGCGAAGAATGTGTAGTAGTAGCAGTGTACGCCCTGTCGGGGGGAAGACTCGGTGATATATGTAAAATGATTGAATTTCAAGCTTGGACTACTATAAGTCCAAGGGAGAATACAAGTAAAATCTACTACGTTTCTGTCTTTTACTTTCCCTTCTTTGCCATTGCATTTCTGG

Coding sequence (CDS)

ATGGCGTCCCAGAACAGAGTAGATCTGGACGGCAACCCGATTAAGCCGATCACCATTTGCATGATTGGCGCTGGTGGGTTCATTGGCTCTCACCTTTGTGAGAAGCTCATGGCTGAAACCCCTCACAAGGTGCTTGCTCTTGATGTTTACAATGACAAGATTAAGCACCTTCTTGAGCCCGATTCCCTACCCTGGGCCGATCGCATCCAGTTCCACCGTCTCAATATCAAGAACGATTCCAGGCTCGAGAGTCTCGTTCGAATGGCAGATCTGACGATAAATCTTGCTGCGATCTGTACACCGGCGGACTACAATACGCGACCACTTGATACCATTTACAGCAATTTCATCGACGCAATTCCTGTGGTTAAATACTGTTCTGGCAACAACAAGCGTCTCATTCACTTTTCAACTTGCGAAGTCTATGGTAAGACAATTGGAAGCTTTCTTCCAAAAGATAGCCCTCTTCGTCAGGATCCGGCATATTATGTTTTGAGTGAGGATGCTTCTCCTTGCATCTTCGGTCCCATTGAGAAGCAAAGATGGTCGTATGCATGTGCGAAACAATTGATTGAGAGGCTGATTTATGCTGAGGGTGCTGAAAATGGGATGGATTTTACAATTGTAAGACCATTCAACTGGATCGGACCAAGGATGGACTTCATTCCTGGCATTGATGGCCCAAGTGAGGGCGTTCCCAGGGTTCTAGCTTGCTTTAGCAATAATCTCCTTCGACACGAGCCACTGAAGCTTGTGGATGGCGGTCAATCCCAAAGAACATTCATATACATTAAGGATGCCATTGAAGCTGTTCTTTTGATGATTGAAAACCCAGCGAGGGCCAATGGCCATATCTTCAATGTGGGCAACCCCAACAATGAAGTAACAGTGAAGCAGCTTGCTGAAATGATGACCAAGGTTTATGCAAAGGTAAGCGGGGAACCTTCGCTTGAGACCCCGACAATCGATATAAGCTCTGAAGAATTCTATGGCGTGGGCTATGACGACAGTGATAAGAGAATTCCTGACATGACCATCATCAACAAGCAACTCGGTTGGAATCCGAAGACATCGCTCTGGGACCTGCTGGAATCGACTTTGACCTACCAACATCGAACATACGCAGAGGCAGTGAAGCAGGCAACATCAAAACCAGCTGCATCTAGCTAG

Protein sequence

MASQNRVDLDGNPIKPITICMIGAGGFIGSHLCEKLMAETPHKVLALDVYNDKIKHLLEPDSLPWADRIQFHRLNIKNDSRLESLVRMADLTINLAAICTPADYNTRPLDTIYSNFIDAIPVVKYCSGNNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLSEDASPCIFGPIEKQRWSYACAKQLIERLIYAEGAENGMDFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRHEPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVKQLAEMMTKVYAKVSGEPSLETPTIDISSEEFYGVGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHRTYAEAVKQATSKPAASS
Homology
BLAST of CmaCh02G013630 vs. ExPASy Swiss-Prot
Match: Q9SGE0 (UDP-D-apiose/UDP-D-xylose synthase 2 OS=Arabidopsis thaliana OX=3702 GN=AXS2 PE=2 SV=1)

HSP 1 Score: 733.4 bits (1892), Expect = 1.3e-210
Identity = 342/384 (89.06%), Postives = 367/384 (95.57%), Query Frame = 0

Query: 5   NRVDLDGNPIKPITICMIGAGGFIGSHLCEKLMAETPHKVLALDVYNDKIKHLLEPDSLP 64
           +R+DLDG PIKP+TICMIGAGGFIGSHLCEKLM ETPHKVLALDVYNDKIKHLLEPD++ 
Sbjct: 6   DRLDLDGKPIKPMTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVQ 65

Query: 65  WADRIQFHRLNIKNDSRLESLVRMADLTINLAAICTPADYNTRPLDTIYSNFIDAIPVVK 124
           WA RIQFHR+NIK+DSRLE L++MADLTINLAAICTPADYNTRPLDTIYSNFIDA+PVVK
Sbjct: 66  WAGRIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVK 125

Query: 125 YCSGNNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLSEDASPCIFGPIEKQRWSY 184
           YCS NNKRLIHFSTCEVYGKTIGSFLPKD PLRQDP +YVL ED SPCIFG IEKQRWSY
Sbjct: 126 YCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPEFYVLKEDISPCIFGSIEKQRWSY 185

Query: 185 ACAKQLIERLIYAEGAENGMDFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 244
           ACAKQLIERL+YAEGAENG++FTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL
Sbjct: 186 ACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 245

Query: 245 RHEPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVKQLAEMM 304
           R EPLKLVDGG+SQRTFIYIKDAIEAVLLMIENP RANGHIFNVGNPNNEVTV+QLAEMM
Sbjct: 246 RREPLKLVDGGESQRTFIYIKDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQLAEMM 305

Query: 305 TKVYAKVSGEPSLETPTIDISSEEFYGVGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLE 364
           T+VYAKVSGE ++E+PTID+SS+EFYG GYDDSDKRIPDMTIIN+QLGWNPKTSLWDLLE
Sbjct: 306 TEVYAKVSGETAIESPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLLE 365

Query: 365 STLTYQHRTYAEAVKQATSKPAAS 389
           STLTYQH TYAEA+K+ATSKP AS
Sbjct: 366 STLTYQHTTYAEAIKKATSKPVAS 389

BLAST of CmaCh02G013630 vs. ExPASy Swiss-Prot
Match: Q9ZUY6 (UDP-D-apiose/UDP-D-xylose synthase 1 OS=Arabidopsis thaliana OX=3702 GN=AXS1 PE=1 SV=1)

HSP 1 Score: 730.7 bits (1885), Expect = 8.6e-210
Identity = 340/384 (88.54%), Postives = 366/384 (95.31%), Query Frame = 0

Query: 5   NRVDLDGNPIKPITICMIGAGGFIGSHLCEKLMAETPHKVLALDVYNDKIKHLLEPDSLP 64
           NRVDLDG PI+P+TICMIGAGGFIGSHLCEKL+ ETPHKVLALDVYNDKIKHLLEPD++ 
Sbjct: 6   NRVDLDGKPIQPLTICMIGAGGFIGSHLCEKLLTETPHKVLALDVYNDKIKHLLEPDTVE 65

Query: 65  WADRIQFHRLNIKNDSRLESLVRMADLTINLAAICTPADYNTRPLDTIYSNFIDAIPVVK 124
           W+ RIQFHR+NIK+DSRLE LV+MADL INLAAICTPADYNTRPLDTIYSNFIDA+PVVK
Sbjct: 66  WSGRIQFHRINIKHDSRLEGLVKMADLIINLAAICTPADYNTRPLDTIYSNFIDALPVVK 125

Query: 125 YCSGNNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLSEDASPCIFGPIEKQRWSY 184
           YCS NNKRLIHFSTCEVYGKTIGSFLPKD PLR DPA+YVL ED SPCIFG IEKQRWSY
Sbjct: 126 YCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRDDPAFYVLKEDISPCIFGSIEKQRWSY 185

Query: 185 ACAKQLIERLIYAEGAENGMDFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 244
           ACAKQLIERL+YAEGAENG++FTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL
Sbjct: 186 ACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 245

Query: 245 RHEPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVKQLAEMM 304
           R EPLKLVDGG+SQRTF+YI DAIEAVLLMIENP RANGHIFNVGNPNNEVTV+QLAEMM
Sbjct: 246 RREPLKLVDGGESQRTFVYINDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQLAEMM 305

Query: 305 TKVYAKVSGEPSLETPTIDISSEEFYGVGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLE 364
           T+VYAKVSGE ++E+PT+D+SS+EFYG GYDDSDKRIPDMTIIN+QLGWNPKTSLWDLLE
Sbjct: 306 TEVYAKVSGEGAIESPTVDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLLE 365

Query: 365 STLTYQHRTYAEAVKQATSKPAAS 389
           STLTYQHRTYAEAVK+ATSKP AS
Sbjct: 366 STLTYQHRTYAEAVKKATSKPVAS 389

BLAST of CmaCh02G013630 vs. ExPASy Swiss-Prot
Match: Q8S9Z2 (UDP-D-apiose/UDP-D-xylose synthase OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0969100 PE=2 SV=1)

HSP 1 Score: 677.6 bits (1747), Expect = 8.6e-194
Identity = 320/384 (83.33%), Postives = 349/384 (90.89%), Query Frame = 0

Query: 6   RVDLDGNPIKPITICMIGAGGFIGSHLCEKLMAETPHKVLALDVYNDKIKHLLEPDSLPW 65
           R+DLDGNPI P+TICMIGAGGFIGSHLCEKLMAET H V A+DVY DKI+HL++P     
Sbjct: 15  RLDLDGNPIAPLTICMIGAGGFIGSHLCEKLMAETAHVVYAVDVYCDKIRHLVDPAPPHL 74

Query: 66  ADRIQFHRLNIKNDSRLESLVRMADLTINLAAICTPADYNTRPLDTIYSNFIDAIPVVKY 125
             RI FHRLNIKNDSRLE L++MADLTINLAAICTPADYNTRPLDTIYSNFIDA+PVVKY
Sbjct: 75  HGRISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 134

Query: 126 CSGNNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLSEDASPCIFGPIEKQRWSYA 185
           CS NNKRLIHFSTCEVYGKTIGSFLP D PLR++P +YVL ED SPCIFGPI KQRWSYA
Sbjct: 135 CSENNKRLIHFSTCEVYGKTIGSFLPTDHPLRKEPEFYVLKEDESPCIFGPIVKQRWSYA 194

Query: 186 CAKQLIERLIYAEGAENGMDFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 245
           CAKQLIERLI+AEGAENG++FTIVRPFNWIGPRMDFIPG+DGPSEGVPRVLACFSNNLLR
Sbjct: 195 CAKQLIERLIFAEGAENGLEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLR 254

Query: 246 HEPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVKQLAEMMT 305
            EPLKLVDGGQSQRTF+YIKDAIEAV LMIENPARANG IFNVGNPNNEVTV+QLAEMMT
Sbjct: 255 REPLKLVDGGQSQRTFVYIKDAIEAVHLMIENPARANGQIFNVGNPNNEVTVRQLAEMMT 314

Query: 306 KVYAKVSGEPSLETPTIDISSEEFYGVGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLES 365
           +VYA VSGEP L+ P ID+SS++FYG GYDDSDKRIPDMTIINKQLGWNPKT L DLLE+
Sbjct: 315 EVYANVSGEPPLDEPMIDVSSKQFYGEGYDDSDKRIPDMTIINKQLGWNPKTPLKDLLET 374

Query: 366 TLTYQHRTYAEAVKQATSKPAASS 390
           TLTYQH+TY EA+K+  S+ +ASS
Sbjct: 375 TLTYQHKTYKEAIKRQMSQASASS 398

BLAST of CmaCh02G013630 vs. ExPASy Swiss-Prot
Match: A6TF98 (Bifunctional polymyxin resistance protein ArnA OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) OX=272620 GN=arnA PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 4.0e-58
Identity = 121/359 (33.70%), Postives = 192/359 (53.48%), Query Frame = 0

Query: 19  ICMIGAGGFIGSHLCEKLMAETPHKVLALDVYNDKIKHLLEPDSLPWADRIQFHRLNIKN 78
           + ++G  GFIG+HL E+L+ +  +++  LD+ +D I   L+        R  F   +I  
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNYEIYGLDIGSDAISRFLD------CPRFHFVEGDISI 377

Query: 79  DSR-LESLVRMADLTINLAAICTPADYNTRPLDTIYSNFIDAIPVVKYCSGNNKRLIHFS 138
            S  +E  ++  D+ + L AI TP +Y   PL     +F + + +++ C   NKR+I  S
Sbjct: 378 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYNKRIIFPS 437

Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLSEDASPCIFGPIEKQRWSYACAKQLIERLIYA 198
           T EVYG                       ED+S  + GPI KQRW Y+ +KQL++R+I+A
Sbjct: 438 TSEVYGMCTDK---------------NFDEDSSNLVVGPINKQRWIYSVSKQLLDRVIWA 497

Query: 199 EGAENGMDFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRHEPLKLVDGGQS 258
            G +NG+ FT+ RPFNW+GPR+D    ++    G  R +     NL+   P+KL++GG+ 
Sbjct: 498 YGDKNGLKFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 557

Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPNNEVTVKQLAEMMTKVYAKVSGEPS 318
           +R F  I D IEA+  +IEN   R +G I N+GNP+NE ++K+LAEM+   + +      
Sbjct: 558 KRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPDNEASIKELAEMLLACFERHPLRDR 617

Query: 319 LE--TPTIDISSEEFYGVGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHRT 374
                   ++ S ++YG GY D + R P +    + L W PK  + + +E TL +  RT
Sbjct: 618 FPPFAGFREVESSDYYGKGYQDVEHRKPSIRNAKRCLNWEPKVEMEETVEHTLDFFLRT 652

BLAST of CmaCh02G013630 vs. ExPASy Swiss-Prot
Match: A1JPN5 (Bifunctional polymyxin resistance protein ArnA OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081) OX=393305 GN=arnA PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 3.4e-57
Identity = 124/357 (34.73%), Postives = 191/357 (53.50%), Query Frame = 0

Query: 19  ICMIGAGGFIGSHLCEKLMAETPHKVLALDVYNDKIKHLLEPDSLPWAD-RIQFHRLNIK 78
           + ++G  GFIG+HL E+L+ +  ++V  LD+ +D I   L+  +  + +  I  H     
Sbjct: 318 VLILGVNGFIGNHLTERLLRDNRYEVYGLDIGSDAICRFLDNPNFHFVEGDISIH----- 377

Query: 79  NDSRLESLVRMADLTINLAAICTPADYNTRPLDTIYSNFIDAIPVVKYCSGNNKRLIHFS 138
               +E  ++  D+ + L AI TP +Y   PL     +F + + +V+ C   NKR++  S
Sbjct: 378 -SEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIVFPS 437

Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLSEDASPCIFGPIEKQRWSYACAKQLIERLIYA 198
           T EVYG            +  D  +    ED+S  I GPI KQRW Y+ +KQL++R+I+A
Sbjct: 438 TSEVYG------------MCDDKEF---DEDSSRLIVGPINKQRWIYSVSKQLLDRVIWA 497

Query: 199 EGAENGMDFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRHEPLKLVDGGQS 258
            GA+  + FT+ RPFNW+GPR+D    +D    G  R +     NL+   P+KLVDGG+ 
Sbjct: 498 YGAKENLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLVDGGEQ 557

Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPNNEVTVKQLAEMMTKVYAKVSGEPS 318
           +R F  I D IEA+  +IEN     +G I N+GNP NE ++++LAEM+ + + K   E  
Sbjct: 558 KRCFTDIHDGIEALFRIIENRDGACDGQIINIGNPTNEASIRELAEMLLRCFEK--HELR 617

Query: 319 LETPTI----DISSEEFYGVGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTY 370
              P      DI S  +YG GY D + R P +    + L W P+ +L   +  TL +
Sbjct: 618 HNFPPFAGFKDIESSAYYGKGYQDVEYRTPSIRNARRILDWQPEIALEQTVMETLDF 648

BLAST of CmaCh02G013630 vs. TAIR 10
Match: AT1G08200.1 (UDP-D-apiose/UDP-D-xylose synthase 2 )

HSP 1 Score: 733.4 bits (1892), Expect = 9.4e-212
Identity = 342/384 (89.06%), Postives = 367/384 (95.57%), Query Frame = 0

Query: 5   NRVDLDGNPIKPITICMIGAGGFIGSHLCEKLMAETPHKVLALDVYNDKIKHLLEPDSLP 64
           +R+DLDG PIKP+TICMIGAGGFIGSHLCEKLM ETPHKVLALDVYNDKIKHLLEPD++ 
Sbjct: 6   DRLDLDGKPIKPMTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVQ 65

Query: 65  WADRIQFHRLNIKNDSRLESLVRMADLTINLAAICTPADYNTRPLDTIYSNFIDAIPVVK 124
           WA RIQFHR+NIK+DSRLE L++MADLTINLAAICTPADYNTRPLDTIYSNFIDA+PVVK
Sbjct: 66  WAGRIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVK 125

Query: 125 YCSGNNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLSEDASPCIFGPIEKQRWSY 184
           YCS NNKRLIHFSTCEVYGKTIGSFLPKD PLRQDP +YVL ED SPCIFG IEKQRWSY
Sbjct: 126 YCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPEFYVLKEDISPCIFGSIEKQRWSY 185

Query: 185 ACAKQLIERLIYAEGAENGMDFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 244
           ACAKQLIERL+YAEGAENG++FTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL
Sbjct: 186 ACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 245

Query: 245 RHEPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVKQLAEMM 304
           R EPLKLVDGG+SQRTFIYIKDAIEAVLLMIENP RANGHIFNVGNPNNEVTV+QLAEMM
Sbjct: 246 RREPLKLVDGGESQRTFIYIKDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQLAEMM 305

Query: 305 TKVYAKVSGEPSLETPTIDISSEEFYGVGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLE 364
           T+VYAKVSGE ++E+PTID+SS+EFYG GYDDSDKRIPDMTIIN+QLGWNPKTSLWDLLE
Sbjct: 306 TEVYAKVSGETAIESPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLLE 365

Query: 365 STLTYQHRTYAEAVKQATSKPAAS 389
           STLTYQH TYAEA+K+ATSKP AS
Sbjct: 366 STLTYQHTTYAEAIKKATSKPVAS 389

BLAST of CmaCh02G013630 vs. TAIR 10
Match: AT2G27860.1 (UDP-D-apiose/UDP-D-xylose synthase 1 )

HSP 1 Score: 730.7 bits (1885), Expect = 6.1e-211
Identity = 340/384 (88.54%), Postives = 366/384 (95.31%), Query Frame = 0

Query: 5   NRVDLDGNPIKPITICMIGAGGFIGSHLCEKLMAETPHKVLALDVYNDKIKHLLEPDSLP 64
           NRVDLDG PI+P+TICMIGAGGFIGSHLCEKL+ ETPHKVLALDVYNDKIKHLLEPD++ 
Sbjct: 6   NRVDLDGKPIQPLTICMIGAGGFIGSHLCEKLLTETPHKVLALDVYNDKIKHLLEPDTVE 65

Query: 65  WADRIQFHRLNIKNDSRLESLVRMADLTINLAAICTPADYNTRPLDTIYSNFIDAIPVVK 124
           W+ RIQFHR+NIK+DSRLE LV+MADL INLAAICTPADYNTRPLDTIYSNFIDA+PVVK
Sbjct: 66  WSGRIQFHRINIKHDSRLEGLVKMADLIINLAAICTPADYNTRPLDTIYSNFIDALPVVK 125

Query: 125 YCSGNNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLSEDASPCIFGPIEKQRWSY 184
           YCS NNKRLIHFSTCEVYGKTIGSFLPKD PLR DPA+YVL ED SPCIFG IEKQRWSY
Sbjct: 126 YCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRDDPAFYVLKEDISPCIFGSIEKQRWSY 185

Query: 185 ACAKQLIERLIYAEGAENGMDFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 244
           ACAKQLIERL+YAEGAENG++FTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL
Sbjct: 186 ACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 245

Query: 245 RHEPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVKQLAEMM 304
           R EPLKLVDGG+SQRTF+YI DAIEAVLLMIENP RANGHIFNVGNPNNEVTV+QLAEMM
Sbjct: 246 RREPLKLVDGGESQRTFVYINDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQLAEMM 305

Query: 305 TKVYAKVSGEPSLETPTIDISSEEFYGVGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLE 364
           T+VYAKVSGE ++E+PT+D+SS+EFYG GYDDSDKRIPDMTIIN+QLGWNPKTSLWDLLE
Sbjct: 306 TEVYAKVSGEGAIESPTVDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLLE 365

Query: 365 STLTYQHRTYAEAVKQATSKPAAS 389
           STLTYQHRTYAEAVK+ATSKP AS
Sbjct: 366 STLTYQHRTYAEAVKKATSKPVAS 389

BLAST of CmaCh02G013630 vs. TAIR 10
Match: AT3G46440.1 (UDP-XYL synthase 5 )

HSP 1 Score: 117.1 bits (292), Expect = 3.2e-26
Identity = 96/343 (27.99%), Postives = 151/343 (44.02%), Query Frame = 0

Query: 19  ICMIGAGGFIGSHLCEKLMAETPHKVLALDVYNDKIKHLLEPDSLPWADRIQFHRLNIKN 78
           I + G  GFIGSHL +KLM    ++V+  D Y    K  L+     W    +F    I++
Sbjct: 31  ILISGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLK----KWIGHPRFEL--IRH 90

Query: 79  DSRLESLVRMADLTINLAAICTPADYNTRPLDTIYSNFIDAIPVVKYCSGNNKRLIHFST 138
           D   E L+   D   +LA   +P  Y   P+ TI +N I  + ++        R++  ST
Sbjct: 91  DV-TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 150

Query: 139 CEVYGKTIGSFLPKDSPLRQDPAYYVLSEDASPCIFGPIEK--QRWSYACAKQLIERLIY 198
            EVYG         D  +   P  Y          +G +     R  Y   K++ E L++
Sbjct: 151 SEVYG---------DPLIHPQPESY----------WGNVNPIGVRSCYDEGKRVAETLMF 210

Query: 199 AEGAENGMDFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRHEPLKLVDGGQ 258
               ++G++  I R FN  GPRM+   G         RV++ F    LR E L +   G 
Sbjct: 211 DYHRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFIAQALRGEALTVQKPGT 270

Query: 259 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVKQLAEMMTKVYAKVSGEPS 318
             R+F Y+ D ++ ++ ++E          N+GNP  E T+ +LAE + ++       PS
Sbjct: 271 QTRSFCYVSDMVDGLMRLMEGDDTGP---INIGNP-GEFTMVELAETVKELI-----NPS 321

Query: 319 LETPTIDISSEEFYGVGYDDSDKRIPDMTIINKQLGWNPKTSL 360
           +E   ++ +         DD  +R PD+T   + LGW PK  L
Sbjct: 331 IEIKMVENTP--------DDPRQRKPDITKAKEVLGWEPKVKL 321

BLAST of CmaCh02G013630 vs. TAIR 10
Match: AT3G46440.2 (UDP-XYL synthase 5 )

HSP 1 Score: 117.1 bits (292), Expect = 3.2e-26
Identity = 96/343 (27.99%), Postives = 151/343 (44.02%), Query Frame = 0

Query: 19  ICMIGAGGFIGSHLCEKLMAETPHKVLALDVYNDKIKHLLEPDSLPWADRIQFHRLNIKN 78
           I + G  GFIGSHL +KLM    ++V+  D Y    K  L+     W    +F    I++
Sbjct: 31  ILISGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLK----KWIGHPRFEL--IRH 90

Query: 79  DSRLESLVRMADLTINLAAICTPADYNTRPLDTIYSNFIDAIPVVKYCSGNNKRLIHFST 138
           D   E L+   D   +LA   +P  Y   P+ TI +N I  + ++        R++  ST
Sbjct: 91  DV-TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 150

Query: 139 CEVYGKTIGSFLPKDSPLRQDPAYYVLSEDASPCIFGPIEK--QRWSYACAKQLIERLIY 198
            EVYG         D  +   P  Y          +G +     R  Y   K++ E L++
Sbjct: 151 SEVYG---------DPLIHPQPESY----------WGNVNPIGVRSCYDEGKRVAETLMF 210

Query: 199 AEGAENGMDFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRHEPLKLVDGGQ 258
               ++G++  I R FN  GPRM+   G         RV++ F    LR E L +   G 
Sbjct: 211 DYHRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFIAQALRGEALTVQKPGT 270

Query: 259 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVKQLAEMMTKVYAKVSGEPS 318
             R+F Y+ D ++ ++ ++E          N+GNP  E T+ +LAE + ++       PS
Sbjct: 271 QTRSFCYVSDMVDGLMRLMEGDDTGP---INIGNP-GEFTMVELAETVKELI-----NPS 321

Query: 319 LETPTIDISSEEFYGVGYDDSDKRIPDMTIINKQLGWNPKTSL 360
           +E   ++ +         DD  +R PD+T   + LGW PK  L
Sbjct: 331 IEIKMVENTP--------DDPRQRKPDITKAKEVLGWEPKVKL 321

BLAST of CmaCh02G013630 vs. TAIR 10
Match: AT5G59290.1 (UDP-glucuronic acid decarboxylase 3 )

HSP 1 Score: 115.9 bits (289), Expect = 7.1e-26
Identity = 97/343 (28.28%), Postives = 153/343 (44.61%), Query Frame = 0

Query: 19  ICMIGAGGFIGSHLCEKLMAETPHKVLALDVYNDKIKHLLEPDSLPWADRIQFHRLNIKN 78
           I + G  GFIGSHL +KLM    ++V+  D Y    K  L+     W    +F    I++
Sbjct: 32  ILISGGAGFIGSHLVDKLMENEKNEVVVADNYFTGSKENLK----KWIGHPRFEL--IRH 91

Query: 79  DSRLESLVRMADLTINLAAICTPADYNTRPLDTIYSNFIDAIPVVKYCSGNNKRLIHFST 138
           D   E L+   D   +LA   +P  Y   P+ TI +N I  + ++        R++  ST
Sbjct: 92  DV-TEPLLIEVDRIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 151

Query: 139 CEVYGKTIGSFLPKDSPLRQDPAYYVLSEDASPCIFGPIEK--QRWSYACAKQLIERLIY 198
            EVYG         D  +   P  Y          +G +     R  Y   K++ E L++
Sbjct: 152 SEVYG---------DPLIHPQPESY----------WGNVNPIGVRSCYDEGKRVAETLMF 211

Query: 199 AEGAENGMDFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRHEPLKLVDGGQ 258
               ++G++  I R FN  GPRM+   G         RV++ F    LR E L +   G 
Sbjct: 212 DYHRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFIAQALRGEALTVQKPGT 271

Query: 259 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVKQLAEMMTKVYAKVSGEPS 318
             R+F Y+ D ++ ++ ++E      G I N+GNP  E T+ +LAE + ++       PS
Sbjct: 272 QTRSFCYVSDMVDGLIRLME--GNDTGPI-NIGNP-GEFTMVELAETVKELI-----NPS 322

Query: 319 LETPTIDISSEEFYGVGYDDSDKRIPDMTIINKQLGWNPKTSL 360
           +E   ++ +         DD  +R PD++   + LGW PK  L
Sbjct: 332 IEIKMVENTP--------DDPRQRKPDISKAKEVLGWEPKVKL 322

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SGE01.3e-21089.06UDP-D-apiose/UDP-D-xylose synthase 2 OS=Arabidopsis thaliana OX=3702 GN=AXS2 PE=... [more]
Q9ZUY68.6e-21088.54UDP-D-apiose/UDP-D-xylose synthase 1 OS=Arabidopsis thaliana OX=3702 GN=AXS1 PE=... [more]
Q8S9Z28.6e-19483.33UDP-D-apiose/UDP-D-xylose synthase OS=Oryza sativa subsp. japonica OX=39947 GN=O... [more]
A6TF984.0e-5833.70Bifunctional polymyxin resistance protein ArnA OS=Klebsiella pneumoniae subsp. p... [more]
A1JPN53.4e-5734.73Bifunctional polymyxin resistance protein ArnA OS=Yersinia enterocolitica seroty... [more]
Match NameE-valueIdentityDescription
AT1G08200.19.4e-21289.06UDP-D-apiose/UDP-D-xylose synthase 2 [more]
AT2G27860.16.1e-21188.54UDP-D-apiose/UDP-D-xylose synthase 1 [more]
AT3G46440.13.2e-2627.99UDP-XYL synthase 5 [more]
AT3G46440.23.2e-2627.99UDP-XYL synthase 5 [more]
AT5G59290.17.1e-2628.28UDP-glucuronic acid decarboxylase 3 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001509NAD-dependent epimerase/dehydratasePFAMPF01370Epimerasecoord: 19..289
e-value: 2.0E-59
score: 201.0
NoneNo IPR availableGENE3D3.40.50.720coord: 17..380
e-value: 1.5E-105
score: 354.8
NoneNo IPR availablePANTHERPTHR43245:SF29UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 2-LIKEcoord: 5..387
NoneNo IPR availablePANTHERPTHR43245BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNAcoord: 5..387
NoneNo IPR availableCDDcd05257Arna_like_SDR_ecoord: 18..373
e-value: 1.28781E-124
score: 360.461
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 18..371

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh02G013630.1CmaCh02G013630.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0048040 UDP-glucuronate decarboxylase activity
molecular_function GO:0003824 catalytic activity