CmaCh02G013140 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh02G013140
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	F-box protein
Location	Cma_Chr02: 7724665 .. 7725675 (-)
RNA-Seq Expression	CmaCh02G013140
Synteny	CmaCh02G013140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTTCTTCTCATCATCTTCCCTCCACCATTGCCGCCCTCCACTCCGATATCCTCCAGACTCATATTCTTACCCGCCTCGACGGCCCTGCTCTGGCCTCCGCCGCCTCTGCCTCCTCCCGCTTCCGCCACCTCTCCGCCGAGGACCAACTCTGGCGTCAAATTTGCTCTGCCACCTGGCCCTCAACCACTCATCCCCGTATCCAGCAAGCCATCTCCGTCTTCCCTTCCGAACACCGCTCCTTCTTCTCCGACGTATTTCCCCTGCTCGATTGCCGGTCGCTTCGTTGCGATCTCGACCGTTCCCCTTCCTCCGAATTGATCTCCGCTGTGGACATTCATTACAAGGACAAACCCCTCCTCTCCAAAGTCCACTCCACCGAGACCCACACGAATTGGTTCCTCTACTCCCCATTTCGCGTCGACGTAATCGACCCAAAAGACTCAATTCCGTTGCCGATTCGCCGCCGAGAGAAACGCGAAGATTGGGTAGCTAATCTAGAGCAAAATCTAACGGCGAGTTGGATTGTAATCGACCCAATTAAGAACAGAGCAGCAAACGTCTCGAGTAGGCAGGCAGTGAACGTCCGGCGACACTGGTTGTCCGGCGAGATACAAGTACAATACACGACGATGATGGGCGGCGACAGGAGGGCGGGGTCGAGAACGGAGATGGTACAGTGCTCGGTGGTGGTGATTTGCGGCGAGAAAGAAGAGGATGGGATGGAAATGAGCGTTAGAGAGGTGAGTATGCAGATTTTGGACATGGAAGGGAAGCATTTGAACGGGAAGGAGAGCTCCGGGATTCTGGGAGAAGCCATGGAAAGTGGGAAGAGAATTAAAGAACAGAAAGGGGAAGCGAAATTGAGGTTCGGAGAATACGAGGAGCTGAAGTGGAAGAGGAAAGGCCGGAAAGACAGAATCGAGAATGCTTTGGATATGCTCTGTGTTTTCACCGGAATCGCCATTTTTCTGTCTTTCTGCACCTTCTTCATCTTCTTCTTCACATAA

mRNA sequence

ATGCCTTCTTCTCATCATCTTCCCTCCACCATTGCCGCCCTCCACTCCGATATCCTCCAGACTCATATTCTTACCCGCCTCGACGGCCCTGCTCTGGCCTCCGCCGCCTCTGCCTCCTCCCGCTTCCGCCACCTCTCCGCCGAGGACCAACTCTGGCGTCAAATTTGCTCTGCCACCTGGCCCTCAACCACTCATCCCCGTATCCAGCAAGCCATCTCCGTCTTCCCTTCCGAACACCGCTCCTTCTTCTCCGACGTATTTCCCCTGCTCGATTGCCGGTCGCTTCGTTGCGATCTCGACCGTTCCCCTTCCTCCGAATTGATCTCCGCTGTGGACATTCATTACAAGGACAAACCCCTCCTCTCCAAAGTCCACTCCACCGAGACCCACACGAATTGGTTCCTCTACTCCCCATTTCGCGTCGACGTAATCGACCCAAAAGACTCAATTCCGTTGCCGATTCGCCGCCGAGAGAAACGCGAAGATTGGGTAGCTAATCTAGAGCAAAATCTAACGGCGAGTTGGATTGTAATCGACCCAATTAAGAACAGAGCAGCAAACGTCTCGAGTAGGCAGGCAGTGAACGTCCGGCGACACTGGTTGTCCGGCGAGATACAAGTACAATACACGACGATGATGGGCGGCGACAGGAGGGCGGGGTCGAGAACGGAGATGGTACAGTGCTCGGTGGTGGTGATTTGCGGCGAGAAAGAAGAGGATGGGATGGAAATGAGCGTTAGAGAGGTGAGTATGCAGATTTTGGACATGGAAGGGAAGCATTTGAACGGGAAGGAGAGCTCCGGGATTCTGGGAGAAGCCATGGAAAGTGGGAAGAGAATTAAAGAACAGAAAGGGGAAGCGAAATTGAGGTTCGGAGAATACGAGGAGCTGAAGTGGAAGAGGAAAGGCCGGAAAGACAGAATCGAGAATGCTTTGGATATGCTCTGTGTTTTCACCGGAATCGCCATTTTTCTGTCTTTCTGCACCTTCTTCATCTTCTTCTTCACATAA

Coding sequence (CDS)

ATGCCTTCTTCTCATCATCTTCCCTCCACCATTGCCGCCCTCCACTCCGATATCCTCCAGACTCATATTCTTACCCGCCTCGACGGCCCTGCTCTGGCCTCCGCCGCCTCTGCCTCCTCCCGCTTCCGCCACCTCTCCGCCGAGGACCAACTCTGGCGTCAAATTTGCTCTGCCACCTGGCCCTCAACCACTCATCCCCGTATCCAGCAAGCCATCTCCGTCTTCCCTTCCGAACACCGCTCCTTCTTCTCCGACGTATTTCCCCTGCTCGATTGCCGGTCGCTTCGTTGCGATCTCGACCGTTCCCCTTCCTCCGAATTGATCTCCGCTGTGGACATTCATTACAAGGACAAACCCCTCCTCTCCAAAGTCCACTCCACCGAGACCCACACGAATTGGTTCCTCTACTCCCCATTTCGCGTCGACGTAATCGACCCAAAAGACTCAATTCCGTTGCCGATTCGCCGCCGAGAGAAACGCGAAGATTGGGTAGCTAATCTAGAGCAAAATCTAACGGCGAGTTGGATTGTAATCGACCCAATTAAGAACAGAGCAGCAAACGTCTCGAGTAGGCAGGCAGTGAACGTCCGGCGACACTGGTTGTCCGGCGAGATACAAGTACAATACACGACGATGATGGGCGGCGACAGGAGGGCGGGGTCGAGAACGGAGATGGTACAGTGCTCGGTGGTGGTGATTTGCGGCGAGAAAGAAGAGGATGGGATGGAAATGAGCGTTAGAGAGGTGAGTATGCAGATTTTGGACATGGAAGGGAAGCATTTGAACGGGAAGGAGAGCTCCGGGATTCTGGGAGAAGCCATGGAAAGTGGGAAGAGAATTAAAGAACAGAAAGGGGAAGCGAAATTGAGGTTCGGAGAATACGAGGAGCTGAAGTGGAAGAGGAAAGGCCGGAAAGACAGAATCGAGAATGCTTTGGATATGCTCTGTGTTTTCACCGGAATCGCCATTTTTCTGTCTTTCTGCACCTTCTTCATCTTCTTCTTCACATAA

Protein sequence

MPSSHHLPSTIAALHSDILQTHILTRLDGPALASAASASSRFRHLSAEDQLWRQICSATWPSTTHPRIQQAISVFPSEHRSFFSDVFPLLDCRSLRCDLDRSPSSELISAVDIHYKDKPLLSKVHSTETHTNWFLYSPFRVDVIDPKDSIPLPIRRREKREDWVANLEQNLTASWIVIDPIKNRAANVSSRQAVNVRRHWLSGEIQVQYTTMMGGDRRAGSRTEMVQCSVVVICGEKEEDGMEMSVREVSMQILDMEGKHLNGKESSGILGEAMESGKRIKEQKGEAKLRFGEYEELKWKRKGRKDRIENALDMLCVFTGIAIFLSFCTFFIFFFT

Homology

[Close]

BLAST of CmaCh02G013140 vs. ExPASy Swiss-Prot
Match: Q9SIH5 (Probable F-box protein At2g36090 OS=Arabidopsis thaliana OX=3702 GN=At2g36090 PE=2 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 3.8e-65
Identity = 149/339 (43.95%), Postives = 212/339 (62.54%), Query Frame = 0


Query: 3   SSHHLPST-----IAALHSDILQTHILTRLDGPALASAASASSRFRHLSAEDQLWRQICS 62
           SS   PST     I+ +H DI+++HILTRLDG  LAS + ASS   HL++ + LW +IC 
Sbjct: 4   SSSFSPSTTVTDLISTVHDDIIESHILTRLDGATLASVSCASSHLHHLASNEILWSKICR 63

Query: 63  ATWPSTTHPRIQQAISVFPSEHRSFFSDVFPLLDCRSLRCDLDRSPSSELISAVDIHYKD 122
           +TWPS +               RSFFSD + +++      DLDR P  ELISAVD+HY+ 
Sbjct: 64  STWPSCS------------GGSRSFFSDAYSMVETAGTVSDLDR-PFPELISAVDLHYRG 123

Query: 123 KPLLSKVHSTETHTNWFLYSPFRVDVIDPKDSIPLPIRRREKREDWVANLEQNLTASWIV 182
           K + S+V  TET T WF  SP R+D++D KD++  PI+RR++ ED   +LE++LT SWIV
Sbjct: 124 KLIFSRVVKTETTTAWFKSSPLRIDLVDTKDTVATPIKRRQRTEDTCRDLEKDLTLSWIV 183

Query: 183 IDPIKNRAANVSSRQAVNVRRHWLSGEIQVQYTTMMGGDRRAGSRTEMVQCSV-VVICGE 242
           IDPI  RAAN+SS + V+V+R+W+SGE++ Q+ T++G           V+C + VV CGE
Sbjct: 184 IDPIGKRAANISSHRPVSVQRNWISGEVEAQFATVVGA----------VECVITVVTCGE 243

Query: 243 KEEDGMEMSVREVSMQILDMEGKHLNGKESSGILGEAMESGKRI--KEQKGEAKLRFGEY 302
           +     EM VREVS+++  MEG HLNG++S  IL   ME GKR+    ++ E+K R  E+
Sbjct: 244 E-----EMHVREVSLKVEKMEGTHLNGRDSLVILRSVME-GKRVNGSRREVESKKRHEEF 303

Query: 303 EELKWKRKGRKDRIENALDMLCVFTGIAIFLSFCTFFIF 334
            E K + K +K R+E+  D+L V  GI  F+    F ++
Sbjct: 304 MEKKREMKEKKMRVESVFDILTVAFGILGFVLLVVFCLW 313

[Close]

BLAST of CmaCh02G013140 vs. ExPASy Swiss-Prot
Match: Q9XIN8 (F-box protein At2g27310 OS=Arabidopsis thaliana OX=3702 GN=At2g27310 PE=2 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.8e-62
Identity = 138/337 (40.95%), Postives = 215/337 (63.80%), Query Frame = 0


Query: 10  TIAALHSDILQTHILTRLDGPALASAASASSRFRHLSAEDQLWRQICSATWPSTTHPRIQ 69
           +I+ LHSDI+QT ILTRLDGP LAS A+ SS  + L  E++LW+++   TWPS   PR+ 
Sbjct: 11  SISTLHSDIIQTQILTRLDGPTLASTATTSSYLQTLCTEEKLWQELSIDTWPSINDPRVV 70

Query: 70  QAISVFPSEHRSFFSDVFPLLD--CRSLRCDLDRSPSSELISAVDIHYKDKPLLSKVHST 129
           QAIS FPS +RSFF+D +P  +   +S + D    P + LISAVD++Y+ + + SKV   
Sbjct: 71  QAISSFPSGYRSFFADSYPFTEHTWQSEKHD----PPTGLISAVDLYYRGEIIYSKVQEM 130

Query: 130 ETH---TNWFLYSPFRVDVIDPKDSIPLPIR-RREKREDWVANLEQNLTASWIVIDPIKN 189
           ET    + WFL SPFRVD++DPK+S+   IR      E WV ++E+++  +WI+IDPIK 
Sbjct: 131 ETEKGKSGWFLSSPFRVDILDPKESVQTRIRYPGGDYEAWVKDMEESMKLNWILIDPIKK 190

Query: 190 RAANVSSRQAVNVRRHWLSGEIQVQYTTMMGGDRRAGSRTEMVQCSVVVICGE------- 249
           RAAN+SSR+AV+ RR+WL+G+++++++T++          E  + + VV CG        
Sbjct: 191 RAANISSRKAVSARRNWLTGDLEIRFSTVV--------TAEAAEVAAVVSCGSAEAWKEV 250

Query: 250 KEEDGMEMSVREVSMQILDMEGKHLNGKESSGILGEAMESGKRIK-EQKGEAKLRFGEYE 309
            EE G E+ VR+V +Q+ D+EGK + G++S  IL   ++  +  K +++  AK R+ EY 
Sbjct: 251 DEEVGGEIHVRDVRLQVEDIEGKCMKGRDSLVILQGLLDGKRSCKDDEERRAKERYEEYV 310

Query: 310 ELKWKRKGRKDRIENALDMLCVFTGIAIFLSFCTFFI 333
            +K + +  K+R E A D +C+  G ++F+   +F +
Sbjct: 311 RMKIQWRENKERREKAQDTICMIFGFSMFVLLWSFIL 335

[Close]

BLAST of CmaCh02G013140 vs. ExPASy Swiss-Prot
Match: Q2V3R1 (F-box protein At3g44326 OS=Arabidopsis thaliana OX=3702 GN=At3g44326 PE=2 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.4e-59
Identity = 138/336 (41.07%), Postives = 209/336 (62.20%), Query Frame = 0


Query: 11  IAALHSDILQTHILTRLDGPALASAASASSRFRHLSAEDQLWRQICSATWPSTTHPRIQQ 70
           I A+ SD+L+++ILTRLDG +LA+ +   S      +++ LWRQ CSATWPST+  R+Q 
Sbjct: 21  INAVSSDVLRSNILTRLDGSSLAALSCTCSNLNSFCSDESLWRQQCSATWPSTSDTRVQS 80

Query: 71  AISVFPSEHRSFFSDVFPLLDCRSLRCDLDRS-PSSELISAVDIHYKDKPLLSKVHSTET 130
            IS FP  HR+FFSD FP L+   +  +L  S  +SELISAVDI YKD  + S+VH TET
Sbjct: 81  IISTFPDGHRTFFSDSFPFLE-HDVGINLPPSVDTSELISAVDIFYKDDVIFSRVHVTET 140

Query: 131 HTNWFLYSPFRVDVIDPKDSIPLPIRRREKRED--WVANLEQNLTASWIVIDPIKNRAAN 190
            + WFL SP RVD+++PK+ IP  +   ++ +D  W ++LE+NL+ SWI+IDP   RAA+
Sbjct: 141 VSGWFLCSPMRVDLVEPKELIPTRVLVTDQCKDDTWKSDLEENLSLSWILIDPTCKRAAD 200

Query: 191 VSSRQAVNVRRHWLSGEIQVQYTTM-MGGDRRAGSRTEMVQCSVVVICGEKEEDGMEMSV 250
           VS+R+ V+V RHWL+GE+ V+++++ + G+++   + E     V+ +   +EE+   M +
Sbjct: 201 VSTRKPVSVHRHWLTGEVHVKFSSIFVVGNKKRSEQVEFTVTVVLAVFNRREEETAVMQI 260

Query: 251 REVSMQILDMEGKHLNGKESSGILGEAMESGKRIKE-QKGEAKLRFGEY-------EELK 310
           REVS+   D +G++L GK S  IL  AM   +R +   + E K ++ EY        E+K
Sbjct: 261 REVSLVAEDKDGRNLGGKVSLEILVAAMGMKRRFRAGGEEEGKEKYIEYMERKTAKAEMK 320

Query: 311 WKRKGRKDRIENALDMLCVFTGIAIFLSFCTFFIFF 335
           W R+G++  +E A   + V     + L F   F  F
Sbjct: 321 W-RRGKETAMETAACWIAV-----LLLGFLLCFYLF 349

[Close]

BLAST of CmaCh02G013140 vs. TAIR 10
Match: AT2G36090.1 (F-box family protein )

HSP 1 Score: 250.0 bits (637), Expect = 2.7e-66
Identity = 149/339 (43.95%), Postives = 212/339 (62.54%), Query Frame = 0


Query: 3   SSHHLPST-----IAALHSDILQTHILTRLDGPALASAASASSRFRHLSAEDQLWRQICS 62
           SS   PST     I+ +H DI+++HILTRLDG  LAS + ASS   HL++ + LW +IC 
Sbjct: 4   SSSFSPSTTVTDLISTVHDDIIESHILTRLDGATLASVSCASSHLHHLASNEILWSKICR 63

Query: 63  ATWPSTTHPRIQQAISVFPSEHRSFFSDVFPLLDCRSLRCDLDRSPSSELISAVDIHYKD 122
           +TWPS +               RSFFSD + +++      DLDR P  ELISAVD+HY+ 
Sbjct: 64  STWPSCS------------GGSRSFFSDAYSMVETAGTVSDLDR-PFPELISAVDLHYRG 123

Query: 123 KPLLSKVHSTETHTNWFLYSPFRVDVIDPKDSIPLPIRRREKREDWVANLEQNLTASWIV 182
           K + S+V  TET T WF  SP R+D++D KD++  PI+RR++ ED   +LE++LT SWIV
Sbjct: 124 KLIFSRVVKTETTTAWFKSSPLRIDLVDTKDTVATPIKRRQRTEDTCRDLEKDLTLSWIV 183

Query: 183 IDPIKNRAANVSSRQAVNVRRHWLSGEIQVQYTTMMGGDRRAGSRTEMVQCSV-VVICGE 242
           IDPI  RAAN+SS + V+V+R+W+SGE++ Q+ T++G           V+C + VV CGE
Sbjct: 184 IDPIGKRAANISSHRPVSVQRNWISGEVEAQFATVVGA----------VECVITVVTCGE 243

Query: 243 KEEDGMEMSVREVSMQILDMEGKHLNGKESSGILGEAMESGKRI--KEQKGEAKLRFGEY 302
           +     EM VREVS+++  MEG HLNG++S  IL   ME GKR+    ++ E+K R  E+
Sbjct: 244 E-----EMHVREVSLKVEKMEGTHLNGRDSLVILRSVME-GKRVNGSRREVESKKRHEEF 303

Query: 303 EELKWKRKGRKDRIENALDMLCVFTGIAIFLSFCTFFIF 334
            E K + K +K R+E+  D+L V  GI  F+    F ++
Sbjct: 304 MEKKREMKEKKMRVESVFDILTVAFGILGFVLLVVFCLW 313

[Close]

BLAST of CmaCh02G013140 vs. TAIR 10
Match: AT2G27310.1 (F-box family protein )

HSP 1 Score: 241.1 bits (614), Expect = 1.3e-63
Identity = 138/337 (40.95%), Postives = 215/337 (63.80%), Query Frame = 0


Query: 10  TIAALHSDILQTHILTRLDGPALASAASASSRFRHLSAEDQLWRQICSATWPSTTHPRIQ 69
           +I+ LHSDI+QT ILTRLDGP LAS A+ SS  + L  E++LW+++   TWPS   PR+ 
Sbjct: 11  SISTLHSDIIQTQILTRLDGPTLASTATTSSYLQTLCTEEKLWQELSIDTWPSINDPRVV 70

Query: 70  QAISVFPSEHRSFFSDVFPLLD--CRSLRCDLDRSPSSELISAVDIHYKDKPLLSKVHST 129
           QAIS FPS +RSFF+D +P  +   +S + D    P + LISAVD++Y+ + + SKV   
Sbjct: 71  QAISSFPSGYRSFFADSYPFTEHTWQSEKHD----PPTGLISAVDLYYRGEIIYSKVQEM 130

Query: 130 ETH---TNWFLYSPFRVDVIDPKDSIPLPIR-RREKREDWVANLEQNLTASWIVIDPIKN 189
           ET    + WFL SPFRVD++DPK+S+   IR      E WV ++E+++  +WI+IDPIK 
Sbjct: 131 ETEKGKSGWFLSSPFRVDILDPKESVQTRIRYPGGDYEAWVKDMEESMKLNWILIDPIKK 190

Query: 190 RAANVSSRQAVNVRRHWLSGEIQVQYTTMMGGDRRAGSRTEMVQCSVVVICGE------- 249
           RAAN+SSR+AV+ RR+WL+G+++++++T++          E  + + VV CG        
Sbjct: 191 RAANISSRKAVSARRNWLTGDLEIRFSTVV--------TAEAAEVAAVVSCGSAEAWKEV 250

Query: 250 KEEDGMEMSVREVSMQILDMEGKHLNGKESSGILGEAMESGKRIK-EQKGEAKLRFGEYE 309
            EE G E+ VR+V +Q+ D+EGK + G++S  IL   ++  +  K +++  AK R+ EY 
Sbjct: 251 DEEVGGEIHVRDVRLQVEDIEGKCMKGRDSLVILQGLLDGKRSCKDDEERRAKERYEEYV 310

Query: 310 ELKWKRKGRKDRIENALDMLCVFTGIAIFLSFCTFFI 333
            +K + +  K+R E A D +C+  G ++F+   +F +
Sbjct: 311 RMKIQWRENKERREKAQDTICMIFGFSMFVLLWSFIL 335

[Close]

BLAST of CmaCh02G013140 vs. TAIR 10
Match: AT3G44326.1 (F-box family protein )

HSP 1 Score: 231.5 bits (589), Expect = 1.0e-60
Identity = 138/336 (41.07%), Postives = 209/336 (62.20%), Query Frame = 0


Query: 11  IAALHSDILQTHILTRLDGPALASAASASSRFRHLSAEDQLWRQICSATWPSTTHPRIQQ 70
           I A+ SD+L+++ILTRLDG +LA+ +   S      +++ LWRQ CSATWPST+  R+Q 
Sbjct: 21  INAVSSDVLRSNILTRLDGSSLAALSCTCSNLNSFCSDESLWRQQCSATWPSTSDTRVQS 80

Query: 71  AISVFPSEHRSFFSDVFPLLDCRSLRCDLDRS-PSSELISAVDIHYKDKPLLSKVHSTET 130
            IS FP  HR+FFSD FP L+   +  +L  S  +SELISAVDI YKD  + S+VH TET
Sbjct: 81  IISTFPDGHRTFFSDSFPFLE-HDVGINLPPSVDTSELISAVDIFYKDDVIFSRVHVTET 140

Query: 131 HTNWFLYSPFRVDVIDPKDSIPLPIRRREKRED--WVANLEQNLTASWIVIDPIKNRAAN 190
            + WFL SP RVD+++PK+ IP  +   ++ +D  W ++LE+NL+ SWI+IDP   RAA+
Sbjct: 141 VSGWFLCSPMRVDLVEPKELIPTRVLVTDQCKDDTWKSDLEENLSLSWILIDPTCKRAAD 200

Query: 191 VSSRQAVNVRRHWLSGEIQVQYTTM-MGGDRRAGSRTEMVQCSVVVICGEKEEDGMEMSV 250
           VS+R+ V+V RHWL+GE+ V+++++ + G+++   + E     V+ +   +EE+   M +
Sbjct: 201 VSTRKPVSVHRHWLTGEVHVKFSSIFVVGNKKRSEQVEFTVTVVLAVFNRREEETAVMQI 260

Query: 251 REVSMQILDMEGKHLNGKESSGILGEAMESGKRIKE-QKGEAKLRFGEY-------EELK 310
           REVS+   D +G++L GK S  IL  AM   +R +   + E K ++ EY        E+K
Sbjct: 261 REVSLVAEDKDGRNLGGKVSLEILVAAMGMKRRFRAGGEEEGKEKYIEYMERKTAKAEMK 320

Query: 311 WKRKGRKDRIENALDMLCVFTGIAIFLSFCTFFIFF 335
           W R+G++  +E A   + V     + L F   F  F
Sbjct: 321 W-RRGKETAMETAACWIAV-----LLLGFLLCFYLF 349

The following BLAST results are available for this feature:

BLAST of CmaCh02G013140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SIH5	3.8e-65	43.95	Probable F-box protein At2g36090 OS=Arabidopsis thaliana OX=3702 GN=At2g36090 PE...	[more]
Q9XIN8	1.8e-62	40.95	F-box protein At2g27310 OS=Arabidopsis thaliana OX=3702 GN=At2g27310 PE=2 SV=1	[more]
Q2V3R1	1.4e-59	41.07	F-box protein At3g44326 OS=Arabidopsis thaliana OX=3702 GN=At3g44326 PE=2 SV=1	[more]

BLAST of CmaCh02G013140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36090.1	2.7e-66	43.95	F-box family protein	[more]
AT2G27310.1	1.3e-63	40.95	F-box family protein	[more]
AT3G44326.1	1.0e-60	41.07	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1280.50		coord: 4..75 e-value: 8.1E-7 score: 30.9
None	No IPR available	PANTHER	PTHR33736	F-BOX PROTEIN-RELATED	coord: 9..330
None	No IPR available	PANTHER	PTHR33736:SF18	F-BOX PLANT-LIKE PROTEIN	coord: 9..330
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 17..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G013140.1	CmaCh02G013140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding