Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGATTCCCATGATGAGGCTGGATGCCAAGCTCCTCCAGAAGGTCCTTTCCTGTGCATCAACAATTGTGGCTTCTTCGGCAGTGCAGCCACTAAGAACATGTGCTCCAAGTGTCACAAGGACATGATGCTGAAACAAGATCATGCTAAGCTTGCTGCTTCATCTATTGAAAATCTTGTCAATGGATCATCTAGTAGCAACAAGGAAATGCCTGAAAGTGTTGCCAATGGTGCCATTTCTCTGGAACCAAAGACTAGTCAATCACATGCACTGCCTGCAATGGGATCTGTGGAGGGCGAGGAAGAAAAACCCAAGGAGGGACCAAAACGTTGCAACAGTTGCAAGAAGCGTGTTGGGTTAACAGGCTTCAATTGTCGATGCGGTAATGTATTTTGTGTAGTTCATCGCTACTCTGACAAACATGACTGCCCCTTCGATTACCACATGGCTGCACAAAATGCCATATCCAAAGCCAACCCTGTTGTCAAGGCTCAGAAGCTCGATAAGATCTAG
mRNA sequence
ATGATGGATTCCCATGATGAGGCTGGATGCCAAGCTCCTCCAGAAGGTCCTTTCCTGTGCATCAACAATTGTGGCTTCTTCGGCAGTGCAGCCACTAAGAACATGTGCTCCAAGTGTCACAAGGACATGATGCTGAAACAAGATCATGCTAAGCTTGCTGCTTCATCTATTGAAAATCTTGTCAATGGATCATCTAGTAGCAACAAGGAAATGCCTGAAAGTGTTGCCAATGGTGCCATTTCTCTGGAACCAAAGACTAGTCAATCACATGCACTGCCTGCAATGGGATCTGTGGAGGGCGAGGAAGAAAAACCCAAGGAGGGACCAAAACGTTGCAACAGTTGCAAGAAGCGTGTTGGGTTAACAGGCTTCAATTGTCGATGCGGTAATGTATTTTGTGTAGTTCATCGCTACTCTGACAAACATGACTGCCCCTTCGATTACCACATGGCTGCACAAAATGCCATATCCAAAGCCAACCCTGTTGTCAAGGCTCAGAAGCTCGATAAGATCTAG
Coding sequence (CDS)
ATGATGGATTCCCATGATGAGGCTGGATGCCAAGCTCCTCCAGAAGGTCCTTTCCTGTGCATCAACAATTGTGGCTTCTTCGGCAGTGCAGCCACTAAGAACATGTGCTCCAAGTGTCACAAGGACATGATGCTGAAACAAGATCATGCTAAGCTTGCTGCTTCATCTATTGAAAATCTTGTCAATGGATCATCTAGTAGCAACAAGGAAATGCCTGAAAGTGTTGCCAATGGTGCCATTTCTCTGGAACCAAAGACTAGTCAATCACATGCACTGCCTGCAATGGGATCTGTGGAGGGCGAGGAAGAAAAACCCAAGGAGGGACCAAAACGTTGCAACAGTTGCAAGAAGCGTGTTGGGTTAACAGGCTTCAATTGTCGATGCGGTAATGTATTTTGTGTAGTTCATCGCTACTCTGACAAACATGACTGCCCCTTCGATTACCACATGGCTGCACAAAATGCCATATCCAAAGCCAACCCTGTTGTCAAGGCTCAGAAGCTCGATAAGATCTAG
Protein sequence
MMDSHDEAGCQAPPEGPFLCINNCGFFGSAATKNMCSKCHKDMMLKQDHAKLAASSIENLVNGSSSSNKEMPESVANGAISLEPKTSQSHALPAMGSVEGEEEKPKEGPKRCNSCKKRVGLTGFNCRCGNVFCVVHRYSDKHDCPFDYHMAAQNAISKANPVVKAQKLDKI
Homology
BLAST of CmaCh02G012370 vs. ExPASy Swiss-Prot
Match:
A2YEZ6 (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica OX=39946 GN=SAP8 PE=2 SV=2)
HSP 1 Score: 213.8 bits (543), Expect = 1.6e-54
Identity = 106/170 (62.35%), Postives = 129/170 (75.88%), Query Frame = 0
Query: 5 HDEAGCQAPPEGPFLCINNCGFFGSAATKNMCSKCHKDMMLKQDHAKLAASSIENLVNGS 64
H E GCQ PEGP LCINNCGFFGSAAT NMCSKCHK+M++KQ+ AKLAASSI+++VNG
Sbjct: 3 HKETGCQ-QPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNGG 62
Query: 65 SSSNKEMPESVANGAIS-LEPKTSQSHALPAMGSVEGEEEKPK--EGPKRCNSCKKRVGL 124
S + + A A++ +E KT + G EG PK EGP RC++C+KRVGL
Sbjct: 63 DSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGL 122
Query: 125 TGFNCRCGNVFCVVHRYSDKHDCPFDYHMAAQNAISKANPVVKAQKLDKI 172
TGFNCRCGN++C +HRYSDKHDC FDY AA++AI+KANPVVKA+KLDKI
Sbjct: 123 TGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171
BLAST of CmaCh02G012370 vs. ExPASy Swiss-Prot
Match:
A3BDI8 (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP8 PE=2 SV=1)
HSP 1 Score: 213.8 bits (543), Expect = 1.6e-54
Identity = 106/170 (62.35%), Postives = 129/170 (75.88%), Query Frame = 0
Query: 5 HDEAGCQAPPEGPFLCINNCGFFGSAATKNMCSKCHKDMMLKQDHAKLAASSIENLVNGS 64
H E GCQ PEGP LCINNCGFFGSAAT NMCSKCHK+M++KQ+ AKLAASSI+++VNG
Sbjct: 3 HKETGCQ-QPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNGG 62
Query: 65 SSSNKEMPESVANGAIS-LEPKTSQSHALPAMGSVEGEEEKPK--EGPKRCNSCKKRVGL 124
S + + A A++ +E KT + G EG PK EGP RC++C+KRVGL
Sbjct: 63 DSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGL 122
Query: 125 TGFNCRCGNVFCVVHRYSDKHDCPFDYHMAAQNAISKANPVVKAQKLDKI 172
TGFNCRCGN++C +HRYSDKHDC FDY AA++AI+KANPVVKA+KLDKI
Sbjct: 123 TGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171
BLAST of CmaCh02G012370 vs. ExPASy Swiss-Prot
Match:
Q6H7P8 (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP4 PE=2 SV=1)
HSP 1 Score: 206.1 bits (523), Expect = 3.2e-52
Identity = 102/172 (59.30%), Postives = 128/172 (74.42%), Query Frame = 0
Query: 5 HDEAGCQAPPEGPFLCINNCGFFGSAATKNMCSKCHKDMMLKQDHAKLAASSIENLVNGS 64
H EAGCQ PEGP LCINNCGFFGSAAT NMCSKCHK+M++K++ AKLAASSI+++VNG
Sbjct: 3 HKEAGCQ-QPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGC 62
Query: 65 SSSNKEMPESVANGAIS---LEPKTSQSHALPAMGSVE--GEEEKPKEGPKRCNSCKKRV 124
+ + + + A++ +E KT G+ E K KEGP RC +C+KRV
Sbjct: 63 DGGKEHIVAASGSTAVAVAQVEAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRCATCRKRV 122
Query: 125 GLTGFNCRCGNVFCVVHRYSDKHDCPFDYHMAAQNAISKANPVVKAQKLDKI 172
GLTGFNCRCGN++C +HRYSDKH+C FDY AA++AI+KANPVVKA+KLDKI
Sbjct: 123 GLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173
BLAST of CmaCh02G012370 vs. ExPASy Swiss-Prot
Match:
Q8H0X0 (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Arabidopsis thaliana OX=3702 GN=SAP2 PE=2 SV=2)
HSP 1 Score: 192.2 bits (487), Expect = 4.8e-48
Identity = 95/175 (54.29%), Postives = 119/175 (68.00%), Query Frame = 0
Query: 5 HDEAGCQAPPEGPFLCINNCGFFGSAATKNMCSKCHKDMMLKQDHAKLAASSIENLVNGS 64
HD+ GCQ+PPEGP LC NNCGFFGSAAT NMCSKCHKDM+ +Q+ AS+ V+G+
Sbjct: 3 HDKTGCQSPPEGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASA----VSGT 62
Query: 65 SSSNKEMPESVANGAISLEPKTSQSHALPAMGS--------VEGEEEKPKEGPKRCNSCK 124
SSS+ + E+ + +E K+ + + S V EE +GP RC +C
Sbjct: 63 SSSSNIIKETFTAALVDIETKSVEPMTVSVQPSSVQVVAEVVAPEEAAKPKGPSRCTTCN 122
Query: 125 KRVGLTGFNCRCGNVFCVVHRYSDKHDCPFDYHMAAQNAISKANPVVKAQKLDKI 172
KRVGLTGF CRCG++FC HRY+D HDC F+YH AAQ AI+KANPVVKA+KLDKI
Sbjct: 123 KRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173
BLAST of CmaCh02G012370 vs. ExPASy Swiss-Prot
Match:
Q7Y1W9 (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP9 PE=2 SV=1)
HSP 1 Score: 139.4 bits (350), Expect = 3.7e-32
Identity = 71/158 (44.94%), Postives = 93/158 (58.86%), Query Frame = 0
Query: 14 PEGPFLCINNCGFFGSAATKNMCSKCHKDMMLKQDHAKLAASSIENLVNGSSSSNKEMPE 73
PE P LC+NNCGFFGS+ T NMCSKC++D + +AA +E +SS+K
Sbjct: 17 PEAPILCVNNCGFFGSSMTNNMCSKCYRDFV---KVTTMAAPVVEKKAFTPASSSK---- 76
Query: 74 SVANGAISLEPKTSQSHALPAMGSVEGEEEKPKEGPKRCNSCKKRVGLTGFNCRCGNVFC 133
LEP A+ + +E PK RC SC+K+VGLTGF CRCG FC
Sbjct: 77 ------TPLEPAKPDEVPAAAVEDKQAAQEPPKPPSNRCLSCRKKVGLTGFQCRCGGTFC 136
Query: 134 VVHRYSDKHDCPFDYHMAAQNAISKANPVVKAQKLDKI 172
HRY++ HDC FDY A ++ I+K NPVV A+K++KI
Sbjct: 137 STHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161
BLAST of CmaCh02G012370 vs. TAIR 10
Match:
AT1G51200.1 (A20/AN1-like zinc finger family protein )
HSP 1 Score: 192.2 bits (487), Expect = 3.4e-49
Identity = 95/175 (54.29%), Postives = 119/175 (68.00%), Query Frame = 0
Query: 5 HDEAGCQAPPEGPFLCINNCGFFGSAATKNMCSKCHKDMMLKQDHAKLAASSIENLVNGS 64
HD+ GCQ+PPEGP LC NNCGFFGSAAT NMCSKCHKDM+ +Q+ AS+ V+G+
Sbjct: 3 HDKTGCQSPPEGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASA----VSGT 62
Query: 65 SSSNKEMPESVANGAISLEPKTSQSHALPAMGS--------VEGEEEKPKEGPKRCNSCK 124
SSS+ + E+ + +E K+ + + S V EE +GP RC +C
Sbjct: 63 SSSSNIIKETFTAALVDIETKSVEPMTVSVQPSSVQVVAEVVAPEEAAKPKGPSRCTTCN 122
Query: 125 KRVGLTGFNCRCGNVFCVVHRYSDKHDCPFDYHMAAQNAISKANPVVKAQKLDKI 172
KRVGLTGF CRCG++FC HRY+D HDC F+YH AAQ AI+KANPVVKA+KLDKI
Sbjct: 123 KRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173
BLAST of CmaCh02G012370 vs. TAIR 10
Match:
AT1G51200.2 (A20/AN1-like zinc finger family protein )
HSP 1 Score: 192.2 bits (487), Expect = 3.4e-49
Identity = 95/175 (54.29%), Postives = 119/175 (68.00%), Query Frame = 0
Query: 5 HDEAGCQAPPEGPFLCINNCGFFGSAATKNMCSKCHKDMMLKQDHAKLAASSIENLVNGS 64
HD+ GCQ+PPEGP LC NNCGFFGSAAT NMCSKCHKDM+ +Q+ AS+ V+G+
Sbjct: 3 HDKTGCQSPPEGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASA----VSGT 62
Query: 65 SSSNKEMPESVANGAISLEPKTSQSHALPAMGS--------VEGEEEKPKEGPKRCNSCK 124
SSS+ + E+ + +E K+ + + S V EE +GP RC +C
Sbjct: 63 SSSSNIIKETFTAALVDIETKSVEPMTVSVQPSSVQVVAEVVAPEEAAKPKGPSRCTTCN 122
Query: 125 KRVGLTGFNCRCGNVFCVVHRYSDKHDCPFDYHMAAQNAISKANPVVKAQKLDKI 172
KRVGLTGF CRCG++FC HRY+D HDC F+YH AAQ AI+KANPVVKA+KLDKI
Sbjct: 123 KRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173
BLAST of CmaCh02G012370 vs. TAIR 10
Match:
AT1G51200.3 (A20/AN1-like zinc finger family protein )
HSP 1 Score: 192.2 bits (487), Expect = 3.4e-49
Identity = 95/175 (54.29%), Postives = 119/175 (68.00%), Query Frame = 0
Query: 5 HDEAGCQAPPEGPFLCINNCGFFGSAATKNMCSKCHKDMMLKQDHAKLAASSIENLVNGS 64
HD+ GCQ+PPEGP LC NNCGFFGSAAT NMCSKCHKDM+ +Q+ AS+ V+G+
Sbjct: 3 HDKTGCQSPPEGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASA----VSGT 62
Query: 65 SSSNKEMPESVANGAISLEPKTSQSHALPAMGS--------VEGEEEKPKEGPKRCNSCK 124
SSS+ + E+ + +E K+ + + S V EE +GP RC +C
Sbjct: 63 SSSSNIIKETFTAALVDIETKSVEPMTVSVQPSSVQVVAEVVAPEEAAKPKGPSRCTTCN 122
Query: 125 KRVGLTGFNCRCGNVFCVVHRYSDKHDCPFDYHMAAQNAISKANPVVKAQKLDKI 172
KRVGLTGF CRCG++FC HRY+D HDC F+YH AAQ AI+KANPVVKA+KLDKI
Sbjct: 123 KRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173
BLAST of CmaCh02G012370 vs. TAIR 10
Match:
AT1G51200.4 (A20/AN1-like zinc finger family protein )
HSP 1 Score: 192.2 bits (487), Expect = 3.4e-49
Identity = 95/175 (54.29%), Postives = 119/175 (68.00%), Query Frame = 0
Query: 5 HDEAGCQAPPEGPFLCINNCGFFGSAATKNMCSKCHKDMMLKQDHAKLAASSIENLVNGS 64
HD+ GCQ+PPEGP LC NNCGFFGSAAT NMCSKCHKDM+ +Q+ AS+ V+G+
Sbjct: 3 HDKTGCQSPPEGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASA----VSGT 62
Query: 65 SSSNKEMPESVANGAISLEPKTSQSHALPAMGS--------VEGEEEKPKEGPKRCNSCK 124
SSS+ + E+ + +E K+ + + S V EE +GP RC +C
Sbjct: 63 SSSSNIIKETFTAALVDIETKSVEPMTVSVQPSSVQVVAEVVAPEEAAKPKGPSRCTTCN 122
Query: 125 KRVGLTGFNCRCGNVFCVVHRYSDKHDCPFDYHMAAQNAISKANPVVKAQKLDKI 172
KRVGLTGF CRCG++FC HRY+D HDC F+YH AAQ AI+KANPVVKA+KLDKI
Sbjct: 123 KRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173
BLAST of CmaCh02G012370 vs. TAIR 10
Match:
AT3G52800.1 (A20/AN1-like zinc finger family protein )
HSP 1 Score: 137.5 bits (345), Expect = 1.0e-32
Identity = 78/177 (44.07%), Postives = 107/177 (60.45%), Query Frame = 0
Query: 6 DEAGCQAPPEGPFLCINNCGFFGSAATKNMCSKCHKDMMLKQDHAKLAASSIENLVNGS- 65
+E CQ PE LC+NNCGF GS+AT N+CS C+ D+ LKQ +SSI++ V S
Sbjct: 3 EEHRCQT-PESNRLCVNNCGFLGSSATMNLCSNCYGDLCLKQQQ---QSSSIKSTVESSL 62
Query: 66 -----SSSNKE-----MPESVANGAISLEPKTSQSHALPAMGSVEGEEEKPKEGPKRCNS 125
SSS+ E +P + N ++ LE + A+ S+ E+ ++ P RC +
Sbjct: 63 SVSPPSSSSSEISSPIIPPLLKNPSVKLEVPEKK-----AVISLPTTEQNQQQRPNRCTT 122
Query: 126 CKKRVGLTGFNCRCGNVFCVVHRYSDKHDCPFDYHMAAQNAISKANPVVKAQKLDKI 172
C+KRVGLTGF CRCG +FC VHRY + H C +D+ A + I+KANP+VKA KL KI
Sbjct: 123 CRKRVGLTGFKCRCGTMFCGVHRYPEIHGCSYDFKSAGREEIAKANPLVKAAKLQKI 170
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
A2YEZ6 | 1.6e-54 | 62.35 | Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza s... | [more] |
A3BDI8 | 1.6e-54 | 62.35 | Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza s... | [more] |
Q6H7P8 | 3.2e-52 | 59.30 | Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza s... | [more] |
Q8H0X0 | 4.8e-48 | 54.29 | Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Arabido... | [more] |
Q7Y1W9 | 3.7e-32 | 44.94 | Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza s... | [more] |