CmaCh02G012370 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh02G012370
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionZinc finger A20 and AN1 domain stress-associated protein
LocationCma_Chr02: 7279127 .. 7279642 (-)
RNA-Seq ExpressionCmaCh02G012370
SyntenyCmaCh02G012370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGATTCCCATGATGAGGCTGGATGCCAAGCTCCTCCAGAAGGTCCTTTCCTGTGCATCAACAATTGTGGCTTCTTCGGCAGTGCAGCCACTAAGAACATGTGCTCCAAGTGTCACAAGGACATGATGCTGAAACAAGATCATGCTAAGCTTGCTGCTTCATCTATTGAAAATCTTGTCAATGGATCATCTAGTAGCAACAAGGAAATGCCTGAAAGTGTTGCCAATGGTGCCATTTCTCTGGAACCAAAGACTAGTCAATCACATGCACTGCCTGCAATGGGATCTGTGGAGGGCGAGGAAGAAAAACCCAAGGAGGGACCAAAACGTTGCAACAGTTGCAAGAAGCGTGTTGGGTTAACAGGCTTCAATTGTCGATGCGGTAATGTATTTTGTGTAGTTCATCGCTACTCTGACAAACATGACTGCCCCTTCGATTACCACATGGCTGCACAAAATGCCATATCCAAAGCCAACCCTGTTGTCAAGGCTCAGAAGCTCGATAAGATCTAG

mRNA sequence

ATGATGGATTCCCATGATGAGGCTGGATGCCAAGCTCCTCCAGAAGGTCCTTTCCTGTGCATCAACAATTGTGGCTTCTTCGGCAGTGCAGCCACTAAGAACATGTGCTCCAAGTGTCACAAGGACATGATGCTGAAACAAGATCATGCTAAGCTTGCTGCTTCATCTATTGAAAATCTTGTCAATGGATCATCTAGTAGCAACAAGGAAATGCCTGAAAGTGTTGCCAATGGTGCCATTTCTCTGGAACCAAAGACTAGTCAATCACATGCACTGCCTGCAATGGGATCTGTGGAGGGCGAGGAAGAAAAACCCAAGGAGGGACCAAAACGTTGCAACAGTTGCAAGAAGCGTGTTGGGTTAACAGGCTTCAATTGTCGATGCGGTAATGTATTTTGTGTAGTTCATCGCTACTCTGACAAACATGACTGCCCCTTCGATTACCACATGGCTGCACAAAATGCCATATCCAAAGCCAACCCTGTTGTCAAGGCTCAGAAGCTCGATAAGATCTAG

Coding sequence (CDS)

ATGATGGATTCCCATGATGAGGCTGGATGCCAAGCTCCTCCAGAAGGTCCTTTCCTGTGCATCAACAATTGTGGCTTCTTCGGCAGTGCAGCCACTAAGAACATGTGCTCCAAGTGTCACAAGGACATGATGCTGAAACAAGATCATGCTAAGCTTGCTGCTTCATCTATTGAAAATCTTGTCAATGGATCATCTAGTAGCAACAAGGAAATGCCTGAAAGTGTTGCCAATGGTGCCATTTCTCTGGAACCAAAGACTAGTCAATCACATGCACTGCCTGCAATGGGATCTGTGGAGGGCGAGGAAGAAAAACCCAAGGAGGGACCAAAACGTTGCAACAGTTGCAAGAAGCGTGTTGGGTTAACAGGCTTCAATTGTCGATGCGGTAATGTATTTTGTGTAGTTCATCGCTACTCTGACAAACATGACTGCCCCTTCGATTACCACATGGCTGCACAAAATGCCATATCCAAAGCCAACCCTGTTGTCAAGGCTCAGAAGCTCGATAAGATCTAG

Protein sequence

MMDSHDEAGCQAPPEGPFLCINNCGFFGSAATKNMCSKCHKDMMLKQDHAKLAASSIENLVNGSSSSNKEMPESVANGAISLEPKTSQSHALPAMGSVEGEEEKPKEGPKRCNSCKKRVGLTGFNCRCGNVFCVVHRYSDKHDCPFDYHMAAQNAISKANPVVKAQKLDKI
Homology
BLAST of CmaCh02G012370 vs. ExPASy Swiss-Prot
Match: A2YEZ6 (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica OX=39946 GN=SAP8 PE=2 SV=2)

HSP 1 Score: 213.8 bits (543), Expect = 1.6e-54
Identity = 106/170 (62.35%), Postives = 129/170 (75.88%), Query Frame = 0

Query: 5   HDEAGCQAPPEGPFLCINNCGFFGSAATKNMCSKCHKDMMLKQDHAKLAASSIENLVNGS 64
           H E GCQ  PEGP LCINNCGFFGSAAT NMCSKCHK+M++KQ+ AKLAASSI+++VNG 
Sbjct: 3   HKETGCQ-QPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNGG 62

Query: 65  SSSNKEMPESVANGAIS-LEPKTSQSHALPAMGSVEGEEEKPK--EGPKRCNSCKKRVGL 124
            S  + +    A  A++ +E KT  +      G  EG    PK  EGP RC++C+KRVGL
Sbjct: 63  DSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGL 122

Query: 125 TGFNCRCGNVFCVVHRYSDKHDCPFDYHMAAQNAISKANPVVKAQKLDKI 172
           TGFNCRCGN++C +HRYSDKHDC FDY  AA++AI+KANPVVKA+KLDKI
Sbjct: 123 TGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171

BLAST of CmaCh02G012370 vs. ExPASy Swiss-Prot
Match: A3BDI8 (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP8 PE=2 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.6e-54
Identity = 106/170 (62.35%), Postives = 129/170 (75.88%), Query Frame = 0

Query: 5   HDEAGCQAPPEGPFLCINNCGFFGSAATKNMCSKCHKDMMLKQDHAKLAASSIENLVNGS 64
           H E GCQ  PEGP LCINNCGFFGSAAT NMCSKCHK+M++KQ+ AKLAASSI+++VNG 
Sbjct: 3   HKETGCQ-QPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNGG 62

Query: 65  SSSNKEMPESVANGAIS-LEPKTSQSHALPAMGSVEGEEEKPK--EGPKRCNSCKKRVGL 124
            S  + +    A  A++ +E KT  +      G  EG    PK  EGP RC++C+KRVGL
Sbjct: 63  DSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGL 122

Query: 125 TGFNCRCGNVFCVVHRYSDKHDCPFDYHMAAQNAISKANPVVKAQKLDKI 172
           TGFNCRCGN++C +HRYSDKHDC FDY  AA++AI+KANPVVKA+KLDKI
Sbjct: 123 TGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171

BLAST of CmaCh02G012370 vs. ExPASy Swiss-Prot
Match: Q6H7P8 (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP4 PE=2 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 3.2e-52
Identity = 102/172 (59.30%), Postives = 128/172 (74.42%), Query Frame = 0

Query: 5   HDEAGCQAPPEGPFLCINNCGFFGSAATKNMCSKCHKDMMLKQDHAKLAASSIENLVNGS 64
           H EAGCQ  PEGP LCINNCGFFGSAAT NMCSKCHK+M++K++ AKLAASSI+++VNG 
Sbjct: 3   HKEAGCQ-QPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGC 62

Query: 65  SSSNKEMPESVANGAIS---LEPKTSQSHALPAMGSVE--GEEEKPKEGPKRCNSCKKRV 124
               + +  +  + A++   +E KT         G+ E      K KEGP RC +C+KRV
Sbjct: 63  DGGKEHIVAASGSTAVAVAQVEAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRCATCRKRV 122

Query: 125 GLTGFNCRCGNVFCVVHRYSDKHDCPFDYHMAAQNAISKANPVVKAQKLDKI 172
           GLTGFNCRCGN++C +HRYSDKH+C FDY  AA++AI+KANPVVKA+KLDKI
Sbjct: 123 GLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173

BLAST of CmaCh02G012370 vs. ExPASy Swiss-Prot
Match: Q8H0X0 (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Arabidopsis thaliana OX=3702 GN=SAP2 PE=2 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 4.8e-48
Identity = 95/175 (54.29%), Postives = 119/175 (68.00%), Query Frame = 0

Query: 5   HDEAGCQAPPEGPFLCINNCGFFGSAATKNMCSKCHKDMMLKQDHAKLAASSIENLVNGS 64
           HD+ GCQ+PPEGP LC NNCGFFGSAAT NMCSKCHKDM+ +Q+     AS+    V+G+
Sbjct: 3   HDKTGCQSPPEGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASA----VSGT 62

Query: 65  SSSNKEMPESVANGAISLEPKTSQSHALPAMGS--------VEGEEEKPKEGPKRCNSCK 124
           SSS+  + E+     + +E K+ +   +    S        V  EE    +GP RC +C 
Sbjct: 63  SSSSNIIKETFTAALVDIETKSVEPMTVSVQPSSVQVVAEVVAPEEAAKPKGPSRCTTCN 122

Query: 125 KRVGLTGFNCRCGNVFCVVHRYSDKHDCPFDYHMAAQNAISKANPVVKAQKLDKI 172
           KRVGLTGF CRCG++FC  HRY+D HDC F+YH AAQ AI+KANPVVKA+KLDKI
Sbjct: 123 KRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173

BLAST of CmaCh02G012370 vs. ExPASy Swiss-Prot
Match: Q7Y1W9 (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP9 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.7e-32
Identity = 71/158 (44.94%), Postives = 93/158 (58.86%), Query Frame = 0

Query: 14  PEGPFLCINNCGFFGSAATKNMCSKCHKDMMLKQDHAKLAASSIENLVNGSSSSNKEMPE 73
           PE P LC+NNCGFFGS+ T NMCSKC++D +       +AA  +E      +SS+K    
Sbjct: 17  PEAPILCVNNCGFFGSSMTNNMCSKCYRDFV---KVTTMAAPVVEKKAFTPASSSK---- 76

Query: 74  SVANGAISLEPKTSQSHALPAMGSVEGEEEKPKEGPKRCNSCKKRVGLTGFNCRCGNVFC 133
                   LEP         A+   +  +E PK    RC SC+K+VGLTGF CRCG  FC
Sbjct: 77  ------TPLEPAKPDEVPAAAVEDKQAAQEPPKPPSNRCLSCRKKVGLTGFQCRCGGTFC 136

Query: 134 VVHRYSDKHDCPFDYHMAAQNAISKANPVVKAQKLDKI 172
             HRY++ HDC FDY  A ++ I+K NPVV A+K++KI
Sbjct: 137 STHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161

BLAST of CmaCh02G012370 vs. TAIR 10
Match: AT1G51200.1 (A20/AN1-like zinc finger family protein )

HSP 1 Score: 192.2 bits (487), Expect = 3.4e-49
Identity = 95/175 (54.29%), Postives = 119/175 (68.00%), Query Frame = 0

Query: 5   HDEAGCQAPPEGPFLCINNCGFFGSAATKNMCSKCHKDMMLKQDHAKLAASSIENLVNGS 64
           HD+ GCQ+PPEGP LC NNCGFFGSAAT NMCSKCHKDM+ +Q+     AS+    V+G+
Sbjct: 3   HDKTGCQSPPEGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASA----VSGT 62

Query: 65  SSSNKEMPESVANGAISLEPKTSQSHALPAMGS--------VEGEEEKPKEGPKRCNSCK 124
           SSS+  + E+     + +E K+ +   +    S        V  EE    +GP RC +C 
Sbjct: 63  SSSSNIIKETFTAALVDIETKSVEPMTVSVQPSSVQVVAEVVAPEEAAKPKGPSRCTTCN 122

Query: 125 KRVGLTGFNCRCGNVFCVVHRYSDKHDCPFDYHMAAQNAISKANPVVKAQKLDKI 172
           KRVGLTGF CRCG++FC  HRY+D HDC F+YH AAQ AI+KANPVVKA+KLDKI
Sbjct: 123 KRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173

BLAST of CmaCh02G012370 vs. TAIR 10
Match: AT1G51200.2 (A20/AN1-like zinc finger family protein )

HSP 1 Score: 192.2 bits (487), Expect = 3.4e-49
Identity = 95/175 (54.29%), Postives = 119/175 (68.00%), Query Frame = 0

Query: 5   HDEAGCQAPPEGPFLCINNCGFFGSAATKNMCSKCHKDMMLKQDHAKLAASSIENLVNGS 64
           HD+ GCQ+PPEGP LC NNCGFFGSAAT NMCSKCHKDM+ +Q+     AS+    V+G+
Sbjct: 3   HDKTGCQSPPEGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASA----VSGT 62

Query: 65  SSSNKEMPESVANGAISLEPKTSQSHALPAMGS--------VEGEEEKPKEGPKRCNSCK 124
           SSS+  + E+     + +E K+ +   +    S        V  EE    +GP RC +C 
Sbjct: 63  SSSSNIIKETFTAALVDIETKSVEPMTVSVQPSSVQVVAEVVAPEEAAKPKGPSRCTTCN 122

Query: 125 KRVGLTGFNCRCGNVFCVVHRYSDKHDCPFDYHMAAQNAISKANPVVKAQKLDKI 172
           KRVGLTGF CRCG++FC  HRY+D HDC F+YH AAQ AI+KANPVVKA+KLDKI
Sbjct: 123 KRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173

BLAST of CmaCh02G012370 vs. TAIR 10
Match: AT1G51200.3 (A20/AN1-like zinc finger family protein )

HSP 1 Score: 192.2 bits (487), Expect = 3.4e-49
Identity = 95/175 (54.29%), Postives = 119/175 (68.00%), Query Frame = 0

Query: 5   HDEAGCQAPPEGPFLCINNCGFFGSAATKNMCSKCHKDMMLKQDHAKLAASSIENLVNGS 64
           HD+ GCQ+PPEGP LC NNCGFFGSAAT NMCSKCHKDM+ +Q+     AS+    V+G+
Sbjct: 3   HDKTGCQSPPEGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASA----VSGT 62

Query: 65  SSSNKEMPESVANGAISLEPKTSQSHALPAMGS--------VEGEEEKPKEGPKRCNSCK 124
           SSS+  + E+     + +E K+ +   +    S        V  EE    +GP RC +C 
Sbjct: 63  SSSSNIIKETFTAALVDIETKSVEPMTVSVQPSSVQVVAEVVAPEEAAKPKGPSRCTTCN 122

Query: 125 KRVGLTGFNCRCGNVFCVVHRYSDKHDCPFDYHMAAQNAISKANPVVKAQKLDKI 172
           KRVGLTGF CRCG++FC  HRY+D HDC F+YH AAQ AI+KANPVVKA+KLDKI
Sbjct: 123 KRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173

BLAST of CmaCh02G012370 vs. TAIR 10
Match: AT1G51200.4 (A20/AN1-like zinc finger family protein )

HSP 1 Score: 192.2 bits (487), Expect = 3.4e-49
Identity = 95/175 (54.29%), Postives = 119/175 (68.00%), Query Frame = 0

Query: 5   HDEAGCQAPPEGPFLCINNCGFFGSAATKNMCSKCHKDMMLKQDHAKLAASSIENLVNGS 64
           HD+ GCQ+PPEGP LC NNCGFFGSAAT NMCSKCHKDM+ +Q+     AS+    V+G+
Sbjct: 3   HDKTGCQSPPEGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASA----VSGT 62

Query: 65  SSSNKEMPESVANGAISLEPKTSQSHALPAMGS--------VEGEEEKPKEGPKRCNSCK 124
           SSS+  + E+     + +E K+ +   +    S        V  EE    +GP RC +C 
Sbjct: 63  SSSSNIIKETFTAALVDIETKSVEPMTVSVQPSSVQVVAEVVAPEEAAKPKGPSRCTTCN 122

Query: 125 KRVGLTGFNCRCGNVFCVVHRYSDKHDCPFDYHMAAQNAISKANPVVKAQKLDKI 172
           KRVGLTGF CRCG++FC  HRY+D HDC F+YH AAQ AI+KANPVVKA+KLDKI
Sbjct: 123 KRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173

BLAST of CmaCh02G012370 vs. TAIR 10
Match: AT3G52800.1 (A20/AN1-like zinc finger family protein )

HSP 1 Score: 137.5 bits (345), Expect = 1.0e-32
Identity = 78/177 (44.07%), Postives = 107/177 (60.45%), Query Frame = 0

Query: 6   DEAGCQAPPEGPFLCINNCGFFGSAATKNMCSKCHKDMMLKQDHAKLAASSIENLVNGS- 65
           +E  CQ  PE   LC+NNCGF GS+AT N+CS C+ D+ LKQ      +SSI++ V  S 
Sbjct: 3   EEHRCQT-PESNRLCVNNCGFLGSSATMNLCSNCYGDLCLKQQQ---QSSSIKSTVESSL 62

Query: 66  -----SSSNKE-----MPESVANGAISLEPKTSQSHALPAMGSVEGEEEKPKEGPKRCNS 125
                SSS+ E     +P  + N ++ LE    +     A+ S+   E+  ++ P RC +
Sbjct: 63  SVSPPSSSSSEISSPIIPPLLKNPSVKLEVPEKK-----AVISLPTTEQNQQQRPNRCTT 122

Query: 126 CKKRVGLTGFNCRCGNVFCVVHRYSDKHDCPFDYHMAAQNAISKANPVVKAQKLDKI 172
           C+KRVGLTGF CRCG +FC VHRY + H C +D+  A +  I+KANP+VKA KL KI
Sbjct: 123 CRKRVGLTGFKCRCGTMFCGVHRYPEIHGCSYDFKSAGREEIAKANPLVKAAKLQKI 170

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A2YEZ61.6e-5462.35Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza s... [more]
A3BDI81.6e-5462.35Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza s... [more]
Q6H7P83.2e-5259.30Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza s... [more]
Q8H0X04.8e-4854.29Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Arabido... [more]
Q7Y1W93.7e-3244.94Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza s... [more]
Match NameE-valueIdentityDescription
AT1G51200.13.4e-4954.29A20/AN1-like zinc finger family protein [more]
AT1G51200.23.4e-4954.29A20/AN1-like zinc finger family protein [more]
AT1G51200.33.4e-4954.29A20/AN1-like zinc finger family protein [more]
AT1G51200.43.4e-4954.29A20/AN1-like zinc finger family protein [more]
AT3G52800.11.0e-3244.07A20/AN1-like zinc finger family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002653Zinc finger, A20-typeSMARTSM00259A20_3coord: 17..41
e-value: 1.3E-6
score: 37.9
IPR002653Zinc finger, A20-typePFAMPF01754zf-A20coord: 19..41
e-value: 5.0E-11
score: 42.3
IPR002653Zinc finger, A20-typePROSITEPS51036ZF_A20coord: 14..48
score: 9.643995
IPR000058Zinc finger, AN1-typeSMARTSM00154AN1_Zf_4coord: 112..149
e-value: 7.1E-15
score: 65.4
IPR000058Zinc finger, AN1-typePFAMPF01428zf-AN1coord: 112..148
e-value: 1.5E-9
score: 37.9
IPR000058Zinc finger, AN1-typePROSITEPS51039ZF_AN1coord: 109..152
score: 12.148273
NoneNo IPR availableGENE3D1.20.5.4770coord: 5..73
e-value: 1.7E-17
score: 64.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..109
NoneNo IPR availablePANTHERPTHR10634AN1-TYPE ZINC FINGER PROTEINcoord: 2..171
NoneNo IPR availablePANTHERPTHR10634:SF95ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8coord: 2..171
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 19..56
IPR035896AN1-like Zinc fingerGENE3D4.10.1110.10coord: 84..167
e-value: 3.3E-27
score: 96.2
IPR035896AN1-like Zinc fingerSUPERFAMILY118310AN1-like Zinc fingercoord: 97..166

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh02G012370.1CmaCh02G012370.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
molecular_function GO:0008270 zinc ion binding