CmaCh02G012360 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh02G012360
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	AP2-like ethylene-responsive transcription factor PLT2
Location	Cma_Chr02: 7276258 .. 7277362 (-)
RNA-Seq Expression	CmaCh02G012360
Synteny	CmaCh02G012360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATGTATGTTTATACATTCACAAATCCCTCTTGCATATCAATCTTGGATTCATCATTGTTTGTCTCTGTTTTGAATTTGAATTTGAATTTGCAGATTAGTAACTATGAGAAGGAAGTGGAGGAAATGAAGCACATGACAAGACAAGAATTTGTGGCTGCCATTACAAGGTTCTTCTATCGTTAATCAATCAATTGTGTTTTTCTGAATCTCATTCTAAATAATAAATATAAATATTGCTGATTTCAGGAAGAGTAGTGGGTTTTCATGGGGTGCATCAATGTATCGTGGTGTTACAAGGTTCAAAATTTCCCTTTTTTTTTTTTTTTGAATTTTTTATTGTTCATAATAATTATTATAAGAATGTGATGTGTTGTGGGGTTAATTAAATTAGGCACCACCAGCATGGAAGATGGCAGGCCAGGATTGGACGAGTGGCTGGAAACAAAGATCTTTATTTGGGAACTTTCAGTAAGCTCTTAACTTCATAGCCTTTGTATATTATTAGTTTAAGATTAGCATTGTATTGTTTGATAGGCACGGAAGAGCAAGAGCAAGAGCAAGAGCAAGAGCAAGCGGCGGAAGCATATGACATAGCCGCCATCAAATTCAGAGGGCTTAACGCAGTCACAAACTTTGACATGTGTCGTTATGACGTGAAGAGCATATTGGACAGCAATTCTGTCCCTATTGGCGGTGGTGCGGCCAAGCGACTGAAAGAAGCCCAGGCCATGGAAGCCTCTCGAAAGCGTGAGGAAATGATGATTGCTCTTGGTGCTTCCTCCTCCTCCTCTAATTCCTCCCATCATAGGCTTCTTCAATCACCCAATTTCACCCAGCCTTTGCTTTCTCTTCAAAACAAAGATCCGGCGTGGTTTCACCACTCTACTTATTCCCACTATGGTAACAACACTCCGTTTTACGGCGGCGGCGGGGGAGACAGTAGTGGAGGGTACCTTGGAAGTGCGTTAGGGATGGGGTGTACGTCGGGGGATGAATACGCGTTGGTTAAGGTGGATTACGATATGCCTAATTCTGACGGTGGTGGGTATGGGCGGTGGTCGGGGGATTCGGTTCTGGGTTCCAACAATGGGGGGTTTTGA

mRNA sequence

ATGATTAGTAACTATGAGAAGGAAGTGGAGGAAATGAAGCACATGACAAGACAAGAATTTGTGGCTGCCATTACAAGGAAGAGTAGTGGGTTTTCATGGGGTGCATCAATGTATCGTGGTGTTACAAGGCACCACCAGCATGGAAGATGGCAGGCCAGGATTGGACGAGTGGCTGGAAACAAAGATCTTTATTTGGGAACTTTCAGCACGGAAGAGCAAGAGCAAGAGCAAGAGCAAGAGCAAGCGGCGGAAGCATATGACATAGCCGCCATCAAATTCAGAGGGCTTAACGCAGTCACAAACTTTGACATGTGTCGTTATGACGTGAAGAGCATATTGGACAGCAATTCTGTCCCTATTGGCGGTGGTGCGGCCAAGCGACTGAAAGAAGCCCAGGCCATGGAAGCCTCTCGAAAGCGTGAGGAAATGATGATTGCTCTTGGTGCTTCCTCCTCCTCCTCTAATTCCTCCCATCATAGGCTTCTTCAATCACCCAATTTCACCCAGCCTTTGCTTTCTCTTCAAAACAAAGATCCGGCGTGGTTTCACCACTCTACTTATTCCCACTATGGTAACAACACTCCGTTTTACGGCGGCGGCGGGGGAGACAGTAGTGGAGGGTACCTTGGAAGTGCGTTAGGGATGGGGTGTACGTCGGGGGATGAATACGCGTTGGTTAAGGTGGATTACGATATGCCTAATTCTGACGGTGGTGGGTATGGGCGGTGGTCGGGGGATTCGGTTCTGGGTTCCAACAATGGGGGGTTTTGA

Coding sequence (CDS)

ATGATTAGTAACTATGAGAAGGAAGTGGAGGAAATGAAGCACATGACAAGACAAGAATTTGTGGCTGCCATTACAAGGAAGAGTAGTGGGTTTTCATGGGGTGCATCAATGTATCGTGGTGTTACAAGGCACCACCAGCATGGAAGATGGCAGGCCAGGATTGGACGAGTGGCTGGAAACAAAGATCTTTATTTGGGAACTTTCAGCACGGAAGAGCAAGAGCAAGAGCAAGAGCAAGAGCAAGCGGCGGAAGCATATGACATAGCCGCCATCAAATTCAGAGGGCTTAACGCAGTCACAAACTTTGACATGTGTCGTTATGACGTGAAGAGCATATTGGACAGCAATTCTGTCCCTATTGGCGGTGGTGCGGCCAAGCGACTGAAAGAAGCCCAGGCCATGGAAGCCTCTCGAAAGCGTGAGGAAATGATGATTGCTCTTGGTGCTTCCTCCTCCTCCTCTAATTCCTCCCATCATAGGCTTCTTCAATCACCCAATTTCACCCAGCCTTTGCTTTCTCTTCAAAACAAAGATCCGGCGTGGTTTCACCACTCTACTTATTCCCACTATGGTAACAACACTCCGTTTTACGGCGGCGGCGGGGGAGACAGTAGTGGAGGGTACCTTGGAAGTGCGTTAGGGATGGGGTGTACGTCGGGGGATGAATACGCGTTGGTTAAGGTGGATTACGATATGCCTAATTCTGACGGTGGTGGGTATGGGCGGTGGTCGGGGGATTCGGTTCTGGGTTCCAACAATGGGGGGTTTTGA

Protein sequence

MISNYEKEVEEMKHMTRQEFVAAITRKSSGFSWGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEQEQEQEQEQAAEAYDIAAIKFRGLNAVTNFDMCRYDVKSILDSNSVPIGGGAAKRLKEAQAMEASRKREEMMIALGASSSSSNSSHHRLLQSPNFTQPLLSLQNKDPAWFHHSTYSHYGNNTPFYGGGGGDSSGGYLGSALGMGCTSGDEYALVKVDYDMPNSDGGGYGRWSGDSVLGSNNGGF

Homology

[Close]

BLAST of CmaCh02G012360 vs. ExPASy Swiss-Prot
Match: Q5YGP8 (AP2-like ethylene-responsive transcription factor PLT1 OS=Arabidopsis thaliana OX=3702 GN=PLT1 PE=2 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 5.7e-69
Identity = 172/328 (52.44%), Postives = 207/328 (63.11%), Query Frame = 0


Query: 2   ISNYEKEVEEMKHMTRQEFVAAITRKSSGFSWGASMYRGVTRHHQHGRWQARIGRVAGNK 61
           I+NYEKEVEEMKHMTRQEFVAAI RKSSGFS GASMYRGVTRHHQHGRWQARIGRVAGNK
Sbjct: 248 ITNYEKEVEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNK 307

Query: 62  DLYLGTFSTEEQEQEQEQEQAAEAYDIAAIKFRGLNAVTNFDMCRYDVKSILDSNSVPIG 121
           DLYLGTFSTE        E+AAEAYDIAAIKFRGLNAVTNF++ RYDVK+IL+S+++PIG
Sbjct: 308 DLYLGTFSTE--------EEAAEAYDIAAIKFRGLNAVTNFEINRYDVKAILESSTLPIG 367

Query: 122 GGAAKRLKEAQAMEASRKREEMMIALGA-------SSSSSNSSHHRLLQSP---NFTQPL 181
           GGAAKRLKEAQA+E+SRKRE  MIALG+       SS+ S S+  RL   P   +  QPL
Sbjct: 368 GGAAKRLKEAQALESSRKREAEMIALGSSFQYGGGSSTGSGSTSSRLQLQPYPLSIQQPL 427

Query: 182 ---LSLQNKDPAWFHH------STYSHYG------------------------------- 241
              LSLQN D + +++      S+++H+                                
Sbjct: 428 EPFLSLQNNDISHYNNNNAHDSSSFNHHSYIQTQLHLHQQTNNYLQQQSSQNSQQLYNAY 487

Query: 242 ------------------NNTPFYGGGGGDSSGGYLGS-ALGMGCT----SGDEYALVKV 256
                             NN    G  G  ++  +LG+  +G+G +    S +E+  VK 
Sbjct: 488 LHSNPALLHGLVSTSIVDNNNNNGGSSGSYNTAAFLGNHGIGIGSSSTVGSTEEFPTVKT 547

[Close]

BLAST of CmaCh02G012360 vs. ExPASy Swiss-Prot
Match: Q5YGP7 (AP2-like ethylene-responsive transcription factor PLT2 OS=Arabidopsis thaliana OX=3702 GN=PLT2 PE=2 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.7e-68
Identity = 173/318 (54.40%), Postives = 203/318 (63.84%), Query Frame = 0


Query: 2   ISNYEKEVEEMKHMTRQEFVAAITRKSSGFSWGASMYRGVTRHHQHGRWQARIGRVAGNK 61
           I+NYEKEVEEMK+MTRQEFVA+I RKSSGFS GASMYRGVTRHHQHGRWQARIGRVAGNK
Sbjct: 257 ITNYEKEVEEMKNMTRQEFVASIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNK 316

Query: 62  DLYLGTFSTEEQEQEQEQEQAAEAYDIAAIKFRGLNAVTNFDMCRYDVKSILDSNSVPIG 121
           DLYLGTFSTE        E+AAEAYDIAAIKFRGLNAVTNF++ RYDVK+IL+SN++PIG
Sbjct: 317 DLYLGTFSTE--------EEAAEAYDIAAIKFRGLNAVTNFEINRYDVKAILESNTLPIG 376

Query: 122 GGAAKRLKEAQAMEASRKREEMMIALG--------ASSSSSNSSHHRL--------LQSP 181
           GGAAKRLKEAQA+E+SRKREE MIALG        AS SSS +S  RL        +Q P
Sbjct: 377 GGAAKRLKEAQALESSRKREE-MIALGSNFHQYGAASGSSSVASSSRLQLQPYPLSIQQP 436

Query: 182 ----NFTQPLLSLQNKDPAWFHHSTYSHY------------------------------- 241
               +  QPLL+LQN +    +H ++S+                                
Sbjct: 437 FEHLHHHQPLLTLQNNNDISQYHDSFSYIQTQLHLHQQQTNNYLQSSSHTSQLYNAYLQS 496

Query: 242 -----------GNNTPFYGGGGGDSSGGYLGSALGMGCTSGDEYALVKVDYDMPNSDGG- 256
                       NNT  + G  G      +GS+  +G ++ +E+  VKVDYDMP S G  
Sbjct: 497 NPGLLHGFVSDNNNTSGFLGNNGIG----IGSSSTVGSSAEEEFPAVKVDYDMPPSGGAT 556

[Close]

BLAST of CmaCh02G012360 vs. ExPASy Swiss-Prot
Match: Q8LSN2 (AP2-like ethylene-responsive transcription factor BBM2 OS=Brassica napus OX=3708 GN=BBM2 PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.5e-48
Identity = 119/199 (59.80%), Postives = 138/199 (69.35%), Query Frame = 0


Query: 2   ISNYEKEVEEMKHMTRQEFVAAITRKSSGFSWGASMYRGVTRHHQHGRWQARIGRVAGNK 61
           +S YEKE+EEMKHMTRQE+VA++ RKSSGFS GAS+YRGVTRHHQHGRWQARIGRVAGNK
Sbjct: 277 MSEYEKEIEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNK 336

Query: 62  DLYLGTFSTEEQEQEQEQEQAAEAYDIAAIKFRGLNAVTNFDMCRYDVKSILDSNSVPIG 121
           DLYLGTF T        QE+AAEAYDIAAIKFRGL AVTNFDM RY+VK+IL+S S+PI 
Sbjct: 337 DLYLGTFGT--------QEEAAEAYDIAAIKFRGLTAVTNFDMNRYNVKAILESPSLPI- 396

Query: 122 GGAAKRLKEAQAMEASRKREEMMIALGASSSSSNSSHHRLLQSPNFTQPLLSLQNKDPAW 181
           G AAKRLKEA     S     MMI+   S S +N+S  +     +     LSL  +    
Sbjct: 397 GSAAKRLKEANRPVPSM----MMISNNVSESENNASGWQNAAVQHHQGVDLSLLQQ---- 452

Query: 182 FHHSTYSHYGNNTPFYGGG 201
            H   Y+ Y     +Y GG
Sbjct: 457 -HQERYNGY-----YYNGG 452

[Close]

BLAST of CmaCh02G012360 vs. ExPASy Swiss-Prot
Match: Q8L3U3 (AP2-like ethylene-responsive transcription factor BBM1 OS=Brassica napus OX=3708 GN=BBM1 PE=2 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 3.2e-48
Identity = 119/199 (59.80%), Postives = 139/199 (69.85%), Query Frame = 0


Query: 2   ISNYEKEVEEMKHMTRQEFVAAITRKSSGFSWGASMYRGVTRHHQHGRWQARIGRVAGNK 61
           +S YEKEVEEMKHMTRQE+VA++ RKSSGFS GAS+YRGVTRHHQHGRWQARIGRVAGNK
Sbjct: 277 MSEYEKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNK 336

Query: 62  DLYLGTFSTEEQEQEQEQEQAAEAYDIAAIKFRGLNAVTNFDMCRYDVKSILDSNSVPIG 121
           DLYLGTF T        QE+AAEAYDIAAIKFRGL AVTNFDM RY+VK+IL+S S+PI 
Sbjct: 337 DLYLGTFGT--------QEEAAEAYDIAAIKFRGLTAVTNFDMNRYNVKAILESPSLPI- 396

Query: 122 GGAAKRLKEAQAMEASRKREEMMIALGASSSSSNSSHHRLLQSPNFTQPLLSLQNKDPAW 181
           G AAKRLKEA     S     MMI+   S S +++S  +     +     LSL ++    
Sbjct: 397 GSAAKRLKEANRPVPSM----MMISNNVSESENSASGWQNAAVQHHQGVDLSLLHQ---- 452

Query: 182 FHHSTYSHYGNNTPFYGGG 201
            H   Y+ Y     +Y GG
Sbjct: 457 -HQERYNGY-----YYNGG 452

[Close]

BLAST of CmaCh02G012360 vs. ExPASy Swiss-Prot
Match: Q6PQQ4 (AP2-like ethylene-responsive transcription factor BBM OS=Arabidopsis thaliana OX=3702 GN=BBM PE=2 SV=2)

HSP 1 Score: 193.0 bits (489), Expect = 4.2e-48
Identity = 107/156 (68.59%), Postives = 124/156 (79.49%), Query Frame = 0


Query: 2   ISNYEKEVEEMKHMTRQEFVAAITRKSSGFSWGASMYRGVTRHHQHGRWQARIGRVAGNK 61
           +S YEKEVEEMKHMTRQE+VA++ RKSSGFS GAS+YRGVTRHHQHGRWQARIGRVAGNK
Sbjct: 277 LSEYEKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNK 336

Query: 62  DLYLGTFSTEEQEQEQEQEQAAEAYDIAAIKFRGLNAVTNFDMCRYDVKSILDSNSVPIG 121
           DLYLGTF T        QE+AAEAYDIAAIKFRGL+AVTNFDM RY+VK+IL+S S+PI 
Sbjct: 337 DLYLGTFGT--------QEEAAEAYDIAAIKFRGLSAVTNFDMNRYNVKAILESPSLPI- 396

Query: 122 GGAAKRLKEAQAMEASRKREEMMIALGASSSSSNSS 158
           G +AKRLK     + +     MMI+   S S++N S
Sbjct: 397 GSSAKRLK-----DVNNPVPAMMISNNVSESANNVS 418

[Close]

BLAST of CmaCh02G012360 vs. TAIR 10
Match: AT3G20840.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 262.3 bits (669), Expect = 4.0e-70
Identity = 172/328 (52.44%), Postives = 207/328 (63.11%), Query Frame = 0


Query: 2   ISNYEKEVEEMKHMTRQEFVAAITRKSSGFSWGASMYRGVTRHHQHGRWQARIGRVAGNK 61
           I+NYEKEVEEMKHMTRQEFVAAI RKSSGFS GASMYRGVTRHHQHGRWQARIGRVAGNK
Sbjct: 248 ITNYEKEVEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNK 307

Query: 62  DLYLGTFSTEEQEQEQEQEQAAEAYDIAAIKFRGLNAVTNFDMCRYDVKSILDSNSVPIG 121
           DLYLGTFSTE        E+AAEAYDIAAIKFRGLNAVTNF++ RYDVK+IL+S+++PIG
Sbjct: 308 DLYLGTFSTE--------EEAAEAYDIAAIKFRGLNAVTNFEINRYDVKAILESSTLPIG 367

Query: 122 GGAAKRLKEAQAMEASRKREEMMIALGA-------SSSSSNSSHHRLLQSP---NFTQPL 181
           GGAAKRLKEAQA+E+SRKRE  MIALG+       SS+ S S+  RL   P   +  QPL
Sbjct: 368 GGAAKRLKEAQALESSRKREAEMIALGSSFQYGGGSSTGSGSTSSRLQLQPYPLSIQQPL 427

Query: 182 ---LSLQNKDPAWFHH------STYSHYG------------------------------- 241
              LSLQN D + +++      S+++H+                                
Sbjct: 428 EPFLSLQNNDISHYNNNNAHDSSSFNHHSYIQTQLHLHQQTNNYLQQQSSQNSQQLYNAY 487

Query: 242 ------------------NNTPFYGGGGGDSSGGYLGS-ALGMGCT----SGDEYALVKV 256
                             NN    G  G  ++  +LG+  +G+G +    S +E+  VK 
Sbjct: 488 LHSNPALLHGLVSTSIVDNNNNNGGSSGSYNTAAFLGNHGIGIGSSSTVGSTEEFPTVKT 547

[Close]

BLAST of CmaCh02G012360 vs. TAIR 10
Match: AT1G51190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 260.8 bits (665), Expect = 1.2e-69
Identity = 173/318 (54.40%), Postives = 203/318 (63.84%), Query Frame = 0


Query: 2   ISNYEKEVEEMKHMTRQEFVAAITRKSSGFSWGASMYRGVTRHHQHGRWQARIGRVAGNK 61
           I+NYEKEVEEMK+MTRQEFVA+I RKSSGFS GASMYRGVTRHHQHGRWQARIGRVAGNK
Sbjct: 257 ITNYEKEVEEMKNMTRQEFVASIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNK 316

Query: 62  DLYLGTFSTEEQEQEQEQEQAAEAYDIAAIKFRGLNAVTNFDMCRYDVKSILDSNSVPIG 121
           DLYLGTFSTE        E+AAEAYDIAAIKFRGLNAVTNF++ RYDVK+IL+SN++PIG
Sbjct: 317 DLYLGTFSTE--------EEAAEAYDIAAIKFRGLNAVTNFEINRYDVKAILESNTLPIG 376

Query: 122 GGAAKRLKEAQAMEASRKREEMMIALG--------ASSSSSNSSHHRL--------LQSP 181
           GGAAKRLKEAQA+E+SRKREE MIALG        AS SSS +S  RL        +Q P
Sbjct: 377 GGAAKRLKEAQALESSRKREE-MIALGSNFHQYGAASGSSSVASSSRLQLQPYPLSIQQP 436

Query: 182 ----NFTQPLLSLQNKDPAWFHHSTYSHY------------------------------- 241
               +  QPLL+LQN +    +H ++S+                                
Sbjct: 437 FEHLHHHQPLLTLQNNNDISQYHDSFSYIQTQLHLHQQQTNNYLQSSSHTSQLYNAYLQS 496

Query: 242 -----------GNNTPFYGGGGGDSSGGYLGSALGMGCTSGDEYALVKVDYDMPNSDGG- 256
                       NNT  + G  G      +GS+  +G ++ +E+  VKVDYDMP S G  
Sbjct: 497 NPGLLHGFVSDNNNTSGFLGNNGIG----IGSSSTVGSSAEEEFPAVKVDYDMPPSGGAT 556

[Close]

BLAST of CmaCh02G012360 vs. TAIR 10
Match: AT5G17430.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 193.0 bits (489), Expect = 3.0e-49
Identity = 107/156 (68.59%), Postives = 124/156 (79.49%), Query Frame = 0


Query: 2   ISNYEKEVEEMKHMTRQEFVAAITRKSSGFSWGASMYRGVTRHHQHGRWQARIGRVAGNK 61
           +S YEKEVEEMKHMTRQE+VA++ RKSSGFS GAS+YRGVTRHHQHGRWQARIGRVAGNK
Sbjct: 277 LSEYEKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNK 336

Query: 62  DLYLGTFSTEEQEQEQEQEQAAEAYDIAAIKFRGLNAVTNFDMCRYDVKSILDSNSVPIG 121
           DLYLGTF T        QE+AAEAYDIAAIKFRGL+AVTNFDM RY+VK+IL+S S+PI 
Sbjct: 337 DLYLGTFGT--------QEEAAEAYDIAAIKFRGLSAVTNFDMNRYNVKAILESPSLPI- 396

Query: 122 GGAAKRLKEAQAMEASRKREEMMIALGASSSSSNSS 158
           G +AKRLK     + +     MMI+   S S++N S
Sbjct: 397 GSSAKRLK-----DVNNPVPAMMISNNVSESANNVS 418

[Close]

BLAST of CmaCh02G012360 vs. TAIR 10
Match: AT5G57390.1 (AINTEGUMENTA-like 5 )

HSP 1 Score: 191.0 bits (484), Expect = 1.1e-48
Identity = 112/190 (58.95%), Postives = 127/190 (66.84%), Query Frame = 0


Query: 2   ISNYEKEVEEMKHMTRQEFVAAITRKSSGFSWGASMYRGVTRHHQHGRWQARIGRVAGNK 61
           ISNYE E+EEMKHMTRQEFVA++ RKSSGFS GASMYRGVTRHHQHGRWQARIGRVAGNK
Sbjct: 270 ISNYESELEEMKHMTRQEFVASLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNK 329

Query: 62  DLYLGTFSTEEQEQEQEQEQAAEAYDIAAIKFRGLNAVTNFDMCRYDVKSILDSNSVPIG 121
           DLYLGTFST        QE+AAEAYDIAAIKFRGLNAVTNFD+ RYDVKSI   N +P+G
Sbjct: 330 DLYLGTFST--------QEEAAEAYDIAAIKFRGLNAVTNFDISRYDVKSIASCN-LPVG 389

Query: 122 GGAAKRLKEAQAMEASRKREEMMIALGASSSSSNSSHHRLLQSPNFTQPLLSLQNKDPAW 181
           G      K + A  A+ K  ++  +                 SP+ T P L+     P  
Sbjct: 390 G---LMPKPSPATAAADKTVDLSPS----------------DSPSLTTPSLTFNVATPVN 431

Query: 182 FHHSTYSHYG 192
            H  T+ H G
Sbjct: 450 DHGGTFYHTG 431

[Close]

BLAST of CmaCh02G012360 vs. TAIR 10
Match: AT5G65510.1 (AINTEGUMENTA-like 7 )

HSP 1 Score: 187.6 bits (475), Expect = 1.3e-47
Identity = 107/200 (53.50%), Postives = 134/200 (67.00%), Query Frame = 0


Query: 2   ISNYEKEVEEMKHMTRQEFVAAITRKSSGFSWGASMYRGVTRHHQHGRWQARIGRVAGNK 61
           +S+Y KE+EEM HMT+QEF+A++ RKSSGFS GAS+YRGVTRHHQ GRWQARIGRVAGNK
Sbjct: 298 VSSYSKELEEMNHMTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNK 357

Query: 62  DLYLGTFSTEEQEQEQEQEQAAEAYDIAAIKFRGLNAVTNFDMCRYDVKSILDSNSVPIG 121
           DLYLGTF+TE        E+AAEAYDIAAIKFRG+NAVTNF+M RYD++++++S S+P+G
Sbjct: 358 DLYLGTFATE--------EEAAEAYDIAAIKFRGINAVTNFEMNRYDIEAVMNS-SLPVG 417

Query: 122 GGAAKRLKEAQAMEASRKREEMMIALGASSSSSNSSHHRLLQSPNFTQPLLSLQNKDP-- 181
           G AAKR K   A+E               S SS+SS H L Q         S QN +   
Sbjct: 418 GAAAKRHKLKLALE---------------SPSSSSSDHNLQQQQLLPSSSPSDQNPNSIP 473

Query: 182 ---------AWFHHSTYSHY 191
                     ++H + + HY
Sbjct: 478 CGIPFEPSVLYYHQNFFQHY 473

The following BLAST results are available for this feature:

BLAST of CmaCh02G012360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5YGP8	5.7e-69	52.44	AP2-like ethylene-responsive transcription factor PLT1 OS=Arabidopsis thaliana O...	[more]
Q5YGP7	1.7e-68	54.40	AP2-like ethylene-responsive transcription factor PLT2 OS=Arabidopsis thaliana O...	[more]
Q8LSN2	1.5e-48	59.80	AP2-like ethylene-responsive transcription factor BBM2 OS=Brassica napus OX=3708...	[more]
Q8L3U3	3.2e-48	59.80	AP2-like ethylene-responsive transcription factor BBM1 OS=Brassica napus OX=3708...	[more]
Q6PQQ4	4.2e-48	68.59	AP2-like ethylene-responsive transcription factor BBM OS=Arabidopsis thaliana OX...	[more]

BLAST of CmaCh02G012360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20840.1	4.0e-70	52.44	Integrase-type DNA-binding superfamily protein	[more]
AT1G51190.1	1.2e-69	54.40	Integrase-type DNA-binding superfamily protein	[more]
AT5G17430.1	3.0e-49	68.59	Integrase-type DNA-binding superfamily protein	[more]
AT5G57390.1	1.1e-48	58.95	AINTEGUMENTA-like 5	[more]
AT5G65510.1	1.3e-47	53.50	AINTEGUMENTA-like 7	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 37..109 e-value: 1.1E-25 score: 101.3
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 38..73 e-value: 7.4E-5 score: 22.9
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 37..103 score: 14.446854
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 36..103 e-value: 1.78868E-15 score: 66.9115
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 37..104 e-value: 1.0E-17 score: 66.0
None	No IPR available	PANTHER	PTHR32467:SF22	AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT2	coord: 2..157
None	No IPR available	PANTHER	PTHR32467	AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR	coord: 2..157
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 36..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G012360.1	CmaCh02G012360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity