CmaCh02G010790 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh02G010790
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionseptum site-determining protein (MIND)
LocationCma_Chr02: 6424548 .. 6425672 (+)
RNA-Seq ExpressionCmaCh02G010790
SyntenyCmaCh02G010790
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAATCCTTCAACTCCTCCCCAACCCATTCTTCTTCAACTCGTTCCATTCCAAATCCCTAACTTCCTCGATCCCCAACCAGAAGCCCTTCTCCAAATCGTACTCTTCCACCGCTGTCAAATGTGTCCTTCAATGGAATCGGAAGCCCGAGCTCGCCGGTGACACTCCCCGCGTTGTCGTCGTCACCTCCGGCAAAGGTGGAGTTGGAAAAACCACCACCACTACCAATGTCGGCATTTCCTTGGCCCGCCTTGGGTTCTCTGTTGTGGCTATTGATGCCGACGTTGGCCTCCGGAATCTCGACCTTCTTTTAGGCCTTGAGAATCGTGTAAATTACACGGTTGTTGAGGTTCTTAATGGGGATTGCCGGTTGGACCAGGCTCTGGTGAGGGATAAACGATGGTCGAACTTTGAATTGCTGTGTATTTCTAAGCCCAGGTCGAAGTTGCCGATGGGTATTGGTGGGAAAGCCTTGGTTTGGCTTGTGGATGCGCTCAAAGCTAGGGAGGAAGGTTGTCCCGATTTCATTCTTATCGATTGTCCGGCTGGAATTGACGCTGGATTCATTACCGCCATTACGCCAGCCAATGAGGCGATTCTTGTAACGACGCCAGATATCACCAGCTTGAGAGATGCAGACCGGGTGATAGGATTGCTCGAATGCGATGGAATTCGGGACATTAAGATGATGGTGAATCGGGTTCGGACAGATATGATCAAGGGGGAGGATATGATGTCTGTACTAGACGTACAAGAAATGTTGGGATTGGCTTTATTGGGTGTAATTCCCGAGGATTCAGAGGTAATTCGTAGCACAAACAGAGGGTACCCTCTGGTATTAAACAAGCCACCCACATTGGCGGGTTTGGCCTTTGAGCAGGCAGCTTGGAGGCTTGTTGAACAGGACAGTATGACGGCTGTGATGGTTGAGGAGGAGCCGAAGAAACGAGGTTTTTTCTCATTCTTTGGAGGCTAAGAGATCAAATTCTCTGCAGACGGATGTGCTCTGATCTTAAGGGGCCATGTATAAATTGGAGTAGAAGGATTTGATGGTGTTAGAAGAGCACCTGCAACTGTTACTCCTTGTTCAAGAGGACATGCTACGGTGAGTAGTTCTGTATAG

mRNA sequence

ATGCCAATCCTTCAACTCCTCCCCAACCCATTCTTCTTCAACTCGTTCCATTCCAAATCCCTAACTTCCTCGATCCCCAACCAGAAGCCCTTCTCCAAATCGTACTCTTCCACCGCTGTCAAATGTGTCCTTCAATGGAATCGGAAGCCCGAGCTCGCCGGTGACACTCCCCGCGTTGTCGTCGTCACCTCCGGCAAAGGTGGAGTTGGAAAAACCACCACCACTACCAATGTCGGCATTTCCTTGGCCCGCCTTGGGTTCTCTGTTGTGGCTATTGATGCCGACGTTGGCCTCCGGAATCTCGACCTTCTTTTAGGCCTTGAGAATCGTGTAAATTACACGGTTGTTGAGGTTCTTAATGGGGATTGCCGGTTGGACCAGGCTCTGGTGAGGGATAAACGATGGTCGAACTTTGAATTGCTGTGTATTTCTAAGCCCAGGTCGAAGTTGCCGATGGGTATTGGTGGGAAAGCCTTGGTTTGGCTTGTGGATGCGCTCAAAGCTAGGGAGGAAGGTTGTCCCGATTTCATTCTTATCGATTGTCCGGCTGGAATTGACGCTGGATTCATTACCGCCATTACGCCAGCCAATGAGGCGATTCTTGTAACGACGCCAGATATCACCAGCTTGAGAGATGCAGACCGGGTGATAGGATTGCTCGAATGCGATGGAATTCGGGACATTAAGATGATGGTGAATCGGGTTCGGACAGATATGATCAAGGGGGAGGATATGATGTCTGTACTAGACGTACAAGAAATGTTGGGATTGGCTTTATTGGGTGTAATTCCCGAGGATTCAGAGGTAATTCGTAGCACAAACAGAGGGTACCCTCTGGTATTAAACAAGCCACCCACATTGGCGGGTTTGGCCTTTGAGCAGGCAGCTTGGAGGCTTGTTGAACAGGACAGTATGACGGCTGTGATGGTTGAGGAGGAGCCGAAGAAACGAGAAGGATTTGATGGTGTTAGAAGAGCACCTGCAACTGTTACTCCTTGTTCAAGAGGACATGCTACGGTGAGTAGTTCTGTATAG

Coding sequence (CDS)

ATGCCAATCCTTCAACTCCTCCCCAACCCATTCTTCTTCAACTCGTTCCATTCCAAATCCCTAACTTCCTCGATCCCCAACCAGAAGCCCTTCTCCAAATCGTACTCTTCCACCGCTGTCAAATGTGTCCTTCAATGGAATCGGAAGCCCGAGCTCGCCGGTGACACTCCCCGCGTTGTCGTCGTCACCTCCGGCAAAGGTGGAGTTGGAAAAACCACCACCACTACCAATGTCGGCATTTCCTTGGCCCGCCTTGGGTTCTCTGTTGTGGCTATTGATGCCGACGTTGGCCTCCGGAATCTCGACCTTCTTTTAGGCCTTGAGAATCGTGTAAATTACACGGTTGTTGAGGTTCTTAATGGGGATTGCCGGTTGGACCAGGCTCTGGTGAGGGATAAACGATGGTCGAACTTTGAATTGCTGTGTATTTCTAAGCCCAGGTCGAAGTTGCCGATGGGTATTGGTGGGAAAGCCTTGGTTTGGCTTGTGGATGCGCTCAAAGCTAGGGAGGAAGGTTGTCCCGATTTCATTCTTATCGATTGTCCGGCTGGAATTGACGCTGGATTCATTACCGCCATTACGCCAGCCAATGAGGCGATTCTTGTAACGACGCCAGATATCACCAGCTTGAGAGATGCAGACCGGGTGATAGGATTGCTCGAATGCGATGGAATTCGGGACATTAAGATGATGGTGAATCGGGTTCGGACAGATATGATCAAGGGGGAGGATATGATGTCTGTACTAGACGTACAAGAAATGTTGGGATTGGCTTTATTGGGTGTAATTCCCGAGGATTCAGAGGTAATTCGTAGCACAAACAGAGGGTACCCTCTGGTATTAAACAAGCCACCCACATTGGCGGGTTTGGCCTTTGAGCAGGCAGCTTGGAGGCTTGTTGAACAGGACAGTATGACGGCTGTGATGGTTGAGGAGGAGCCGAAGAAACGAGAAGGATTTGATGGTGTTAGAAGAGCACCTGCAACTGTTACTCCTTGTTCAAGAGGACATGCTACGGTGAGTAGTTCTGTATAG

Protein sequence

MPILQLLPNPFFFNSFHSKSLTSSIPNQKPFSKSYSSTAVKCVLQWNRKPELAGDTPRVVVVTSGKGGVGKTTTTTNVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPMGIGGKALVWLVDALKAREEGCPDFILIDCPAGIDAGFITAITPANEAILVTTPDITSLRDADRVIGLLECDGIRDIKMMVNRVRTDMIKGEDMMSVLDVQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVEQDSMTAVMVEEEPKKREGFDGVRRAPATVTPCSRGHATVSSSV
Homology
BLAST of CmaCh02G010790 vs. ExPASy Swiss-Prot
Match: Q9MBA2 (Putative septum site-determining protein minD homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MIND1 PE=1 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 8.9e-142
Identity = 260/315 (82.54%), Postives = 279/315 (88.57%), Query Frame = 0

Query: 13  FNSFHSKSLTSSIPNQKPFSKS-------YSSTAVKCVLQWNRKPELAGDTPRVVVVTSG 72
           F++ H   L  S  +QK    S          + ++ VLQ+NRKPELAG+TPR+VV+TSG
Sbjct: 7   FSTNHQSLLLPSSLSQKTLISSPRFVNNPSRRSPIRSVLQFNRKPELAGETPRIVVITSG 66

Query: 73  KGGVGKTTTTTNVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLNGDCRL 132
           KGGVGKTTTT NVG+SLAR GFSVVAIDAD+GLRNLDLLLGLENRVNYT VEV+NGDCRL
Sbjct: 67  KGGVGKTTTTANVGLSLARYGFSVVAIDADLGLRNLDLLLGLENRVNYTCVEVINGDCRL 126

Query: 133 DQALVRDKRWSNFELLCISKPRSKLPMGIGGKALVWLVDALKAREEGCPDFILIDCPAGI 192
           DQALVRDKRWSNFELLCISKPRSKLPMG GGKAL WLVDALK R EG PDFI+IDCPAGI
Sbjct: 127 DQALVRDKRWSNFELLCISKPRSKLPMGFGGKALEWLVDALKTRPEGSPDFIIIDCPAGI 186

Query: 193 DAGFITAITPANEAILVTTPDITSLRDADRVIGLLECDGIRDIKMMVNRVRTDMIKGEDM 252
           DAGFITAITPANEA+LVTTPDIT+LRDADRV GLLECDGIRDIKM+VNRVRTDMIKGEDM
Sbjct: 187 DAGFITAITPANEAVLVTTPDITALRDADRVTGLLECDGIRDIKMIVNRVRTDMIKGEDM 246

Query: 253 MSVLDVQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVEQDSM 312
           MSVLDVQEMLGL+LLGVIPEDSEVIRSTNRG+PLVLNKPPTLAGLAFEQAAWRLVEQDSM
Sbjct: 247 MSVLDVQEMLGLSLLGVIPEDSEVIRSTNRGFPLVLNKPPTLAGLAFEQAAWRLVEQDSM 306

Query: 313 TAVMVEEEPKKREGF 321
            AVMVEEEPKKR  F
Sbjct: 307 KAVMVEEEPKKRGFF 321

BLAST of CmaCh02G010790 vs. ExPASy Swiss-Prot
Match: Q20EV4 (Putative septum site-determining protein MinD OS=Oltmannsiellopsis viridis OX=51324 GN=minD PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.9e-83
Identity = 162/256 (63.28%), Postives = 204/256 (79.69%), Query Frame = 0

Query: 47  NRKPE--LAGDTPRVVVVTSGKGGVGKTTTTTNVGISLARLGFSVVAIDADVGLRNLDLL 106
           N +P+  L   TPR +VVTSGKGGVGKTT T N+G+S+ARLG+ VV +DAD+GLRNLDLL
Sbjct: 40  NERPDLNLLEGTPRTIVVTSGKGGVGKTTATANLGMSIARLGYRVVLVDADIGLRNLDLL 99

Query: 107 LGLENRVNYTVVEVLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPMGIGGKALVWLVD 166
           LGLENRV YT +++L+G CRLDQAL+RDKRW N  LL ISK R +    +  K +  L++
Sbjct: 100 LGLENRVLYTAMDILDGQCRLDQALIRDKRWKNLSLLAISKNRQR--YNVTRKRMNMLIE 159

Query: 167 ALKAREEGCPDFILIDCPAGIDAGFITAITPANEAILVTTPDITSLRDADRVIGLLECDG 226
           +L  +++G  D+ILIDCPAGID GFI A++PA EAI+VTTP+ITS+RDADRV GLLE +G
Sbjct: 160 SL--QKQGY-DYILIDCPAGIDVGFINAVSPAKEAIIVTTPEITSIRDADRVAGLLESNG 219

Query: 227 IRDIKMMVNRVRTDMIKGEDMMSVLDVQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKP 286
           I ++K++VNRVR++MI+  DMMSV DVQEMLG+ LLG IPED+ VI STNRG PLVL K 
Sbjct: 220 IYNVKLLVNRVRSEMIQQNDMMSVRDVQEMLGIPLLGAIPEDNHVIISTNRGEPLVLKKK 279

Query: 287 PTLAGLAFEQAAWRLV 301
            TL+G+AFE AA RL+
Sbjct: 280 LTLSGIAFENAARRLI 290

BLAST of CmaCh02G010790 vs. ExPASy Swiss-Prot
Match: Q9MUM5 (Putative septum site-determining protein MinD OS=Mesostigma viride OX=41882 GN=minD PE=3 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 3.5e-82
Identity = 162/257 (63.04%), Postives = 197/257 (76.65%), Query Frame = 0

Query: 45  QWNRKPELAGDT-PRVVVVTSGKGGVGKTTTTTNVGISLARLGFSVVAIDADVGLRNLDL 104
           Q N+  E    T  R +V+TSGKGGVGKTTTT N+G+S+ARLG+ V  IDADVGLRNLDL
Sbjct: 4   QINKDGEKKNSTDTRTIVITSGKGGVGKTTTTANLGMSIARLGYKVALIDADVGLRNLDL 63

Query: 105 LLGLENRVNYTVVEVLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPMGIGGKALVWLV 164
           LLGLENRV YT +EV  G+C LDQAL+RDKRWSN  LL ISK R +    +  + +  LV
Sbjct: 64  LLGLENRVIYTAMEVFEGECCLDQALIRDKRWSNLALLAISKTRQR--YHLTRRNMEMLV 123

Query: 165 DALKAREEGCPDFILIDCPAGIDAGFITAITPANEAILVTTPDITSLRDADRVIGLLECD 224
           D+++ R     +FILIDCPAGID GF+ A+ PA EA++VTTP+ITS+RDADRV GLLE  
Sbjct: 124 DSIRLRNY---NFILIDCPAGIDVGFVNAVAPAEEAVVVTTPEITSIRDADRVAGLLEAS 183

Query: 225 GIRDIKMMVNRVRTDMIKGEDMMSVLDVQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNK 284
           GI ++K++VNRVR DMI+  DM+SV DVQEMLG+ LLG IPED+ VI STNRG PLVLNK
Sbjct: 184 GIYEVKLLVNRVRPDMIQKNDMLSVRDVQEMLGIPLLGAIPEDTNVIVSTNRGQPLVLNK 243

Query: 285 PPTLAGLAFEQAAWRLV 301
             TL+G++FE AA RLV
Sbjct: 244 KLTLSGISFENAARRLV 255

BLAST of CmaCh02G010790 vs. ExPASy Swiss-Prot
Match: P56346 (Putative septum site-determining protein MinD OS=Chlorella vulgaris OX=3077 GN=minD PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 6.7e-81
Identity = 158/243 (65.02%), Postives = 193/243 (79.42%), Query Frame = 0

Query: 58  RVVVVTSGKGGVGKTTTTTNVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVE 117
           RV+V+TSGKGGVGKTTTT N+G+S+ARLG+ V  IDAD+GLRNLDLLLGLENRV YT ++
Sbjct: 17  RVIVITSGKGGVGKTTTTANLGMSIARLGYRVALIDADIGLRNLDLLLGLENRVLYTAMD 76

Query: 118 VLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPMGIGGKALVWLVDALKAREEGCPDFI 177
           ++ G CRLDQAL+RDKRW N  LL ISK R K    +  K +  L+D++K  E G   F+
Sbjct: 77  IVEGQCRLDQALIRDKRWKNLALLAISKNRQK--YNVTRKNMQNLIDSVK--ELGF-QFV 136

Query: 178 LIDCPAGIDAGFITAITPANEAILVTTPDITSLRDADRVIGLLECDGIRDIKMMVNRVRT 237
           LIDCPAGID GFI AI  A EA++VTTP+IT++RDADRV GLLE +GI ++K++VNRVR 
Sbjct: 137 LIDCPAGIDVGFINAIASAQEAVIVTTPEITAIRDADRVAGLLEANGIYNVKLLVNRVRP 196

Query: 238 DMIKGEDMMSVLDVQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAW 297
           DMI+  DMMSV DVQEMLG+ LLG IPED+ VI STN+G PLVLNK  TL+G+AFE AA 
Sbjct: 197 DMIQKNDMMSVRDVQEMLGIPLLGAIPEDTSVIISTNKGEPLVLNKKLTLSGIAFENAAR 254

Query: 298 RLV 301
           RL+
Sbjct: 257 RLI 254

BLAST of CmaCh02G010790 vs. ExPASy Swiss-Prot
Match: Q3ZIZ0 (Putative septum site-determining protein MinD OS=Tupiella akineta OX=160070 GN=minD PE=3 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 6.2e-79
Identity = 156/243 (64.20%), Postives = 190/243 (78.19%), Query Frame = 0

Query: 58  RVVVVTSGKGGVGKTTTTTNVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVE 117
           R++VVTSGKGGVGKTT T N+G+S+ARLG+ VV IDAD+GLRNLDLLLGLENR+ YTV++
Sbjct: 42  RIIVVTSGKGGVGKTTATANIGMSIARLGYKVVLIDADIGLRNLDLLLGLENRILYTVMD 101

Query: 118 VLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPMGIGGKALVWLVDALKAREEGCPDFI 177
           V  G CRLDQAL+RDKRW N  LL ISK R +    +  K +  LV AL         +I
Sbjct: 102 VFEGQCRLDQALIRDKRWKNLSLLSISKNRQR--YNVTRKNMQNLVKALANLNF---RYI 161

Query: 178 LIDCPAGIDAGFITAITPANEAILVTTPDITSLRDADRVIGLLECDGIRDIKMMVNRVRT 237
           LIDCPAGID GFI AI+PA EA++VTT +I ++RDADRV GLLE +GI DIK+++NRVR+
Sbjct: 162 LIDCPAGIDVGFINAISPAQEALIVTTSEIPAIRDADRVAGLLEANGIFDIKLLINRVRS 221

Query: 238 DMIKGEDMMSVLDVQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAW 297
           D+I+  DMMSV DVQE+LG+ LLG IPED++VI STNRG PLVL K  TL+G+AFE AA 
Sbjct: 222 DLIQKNDMMSVRDVQEVLGVPLLGAIPEDNQVIVSTNRGEPLVLKKKLTLSGIAFENAAR 279

Query: 298 RLV 301
           RLV
Sbjct: 282 RLV 279

BLAST of CmaCh02G010790 vs. TAIR 10
Match: AT5G24020.1 (septum site-determining protein (MIND) )

HSP 1 Score: 504.6 bits (1298), Expect = 6.3e-143
Identity = 260/315 (82.54%), Postives = 279/315 (88.57%), Query Frame = 0

Query: 13  FNSFHSKSLTSSIPNQKPFSKS-------YSSTAVKCVLQWNRKPELAGDTPRVVVVTSG 72
           F++ H   L  S  +QK    S          + ++ VLQ+NRKPELAG+TPR+VV+TSG
Sbjct: 7   FSTNHQSLLLPSSLSQKTLISSPRFVNNPSRRSPIRSVLQFNRKPELAGETPRIVVITSG 66

Query: 73  KGGVGKTTTTTNVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLNGDCRL 132
           KGGVGKTTTT NVG+SLAR GFSVVAIDAD+GLRNLDLLLGLENRVNYT VEV+NGDCRL
Sbjct: 67  KGGVGKTTTTANVGLSLARYGFSVVAIDADLGLRNLDLLLGLENRVNYTCVEVINGDCRL 126

Query: 133 DQALVRDKRWSNFELLCISKPRSKLPMGIGGKALVWLVDALKAREEGCPDFILIDCPAGI 192
           DQALVRDKRWSNFELLCISKPRSKLPMG GGKAL WLVDALK R EG PDFI+IDCPAGI
Sbjct: 127 DQALVRDKRWSNFELLCISKPRSKLPMGFGGKALEWLVDALKTRPEGSPDFIIIDCPAGI 186

Query: 193 DAGFITAITPANEAILVTTPDITSLRDADRVIGLLECDGIRDIKMMVNRVRTDMIKGEDM 252
           DAGFITAITPANEA+LVTTPDIT+LRDADRV GLLECDGIRDIKM+VNRVRTDMIKGEDM
Sbjct: 187 DAGFITAITPANEAVLVTTPDITALRDADRVTGLLECDGIRDIKMIVNRVRTDMIKGEDM 246

Query: 253 MSVLDVQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVEQDSM 312
           MSVLDVQEMLGL+LLGVIPEDSEVIRSTNRG+PLVLNKPPTLAGLAFEQAAWRLVEQDSM
Sbjct: 247 MSVLDVQEMLGLSLLGVIPEDSEVIRSTNRGFPLVLNKPPTLAGLAFEQAAWRLVEQDSM 306

Query: 313 TAVMVEEEPKKREGF 321
            AVMVEEEPKKR  F
Sbjct: 307 KAVMVEEEPKKRGFF 321

BLAST of CmaCh02G010790 vs. TAIR 10
Match: AT4G19540.1 (IND1(iron-sulfur protein required for NADH dehydrogenase)-like )

HSP 1 Score: 59.7 bits (143), Expect = 5.4e-09
Identity = 62/265 (23.40%), Postives = 119/265 (44.91%), Query Frame = 0

Query: 59  VVVVTSGKGGVGKTTTTTNVGISLA-RLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVE 118
           ++ V SGKGGVGK++T  N+ ++LA +    +  +DADV   ++ +++ +  +       
Sbjct: 45  IIAVASGKGGVGKSSTAVNLAVALANKCELKIGLLDADVYGPSVPIMMNINQKPQ----- 104

Query: 119 VLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPMGI---GGKALVW--------LVDAL 178
            +N D ++           N+ + C+S       MG+       LVW        L    
Sbjct: 105 -VNQDMKMIPV-------ENYGVKCMS-------MGLLVEKDAPLVWRGPMVMSALAKMT 164

Query: 179 KAREEGCPDFILIDCPAGI-DAGF-ITAITPANEAILVTTPDITSLRDADRVIGLLECDG 238
           K  + G  D +++D P G  DA   I+     + A++V+TP   +L DA+R I + +   
Sbjct: 165 KGVDWGDLDILVVDMPPGTGDAQISISQNLKLSGAVIVSTPQDVALADANRGISMFDKVR 224

Query: 239 IRDIKMMVNRV--------RTDMIKGEDMMSVLDVQEMLGLALLGVIPEDSEVIRSTNRG 298
           +  + ++ N              I G++           GL L+G IP +  +   ++ G
Sbjct: 225 VPILGLVENMSCFVCPHCNEPSFIFGKE--GARRTAAKKGLKLIGEIPLEMSIREGSDEG 284

Query: 299 YPLVLNKPPTLAGLAFEQAAWRLVE 302
            P+V++ P ++   A++  A  +V+
Sbjct: 285 VPVVVSSPGSIVSKAYQDLAQNVVK 287

BLAST of CmaCh02G010790 vs. TAIR 10
Match: AT3G24430.1 (ATP binding )

HSP 1 Score: 48.9 bits (115), Expect = 9.4e-06
Identity = 61/271 (22.51%), Postives = 109/271 (40.22%), Query Frame = 0

Query: 49  KPELAGDTP-------RVVVVTSGKGGVGKTTTTTNVGISLARLGFSVVAIDADVGLRNL 108
           KP  AG  P        ++ V+S KGGVGK+T   N+  +LA +G  V   DADV   +L
Sbjct: 161 KPIFAGQLPFGLSRISNIIAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSL 220

Query: 109 DLLLGLENRVNYTVVEVLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPMGIGGKALVW 168
             ++  E+R+          +   ++  +    +   +L+          +  G      
Sbjct: 221 PTMVNPESRIL---------EMNPEKKTIIPTEYMGVKLVSFGFAGQGRAIMRGPMVSGV 280

Query: 169 LVDALKAREEGCPDFILIDCPAGIDAGFIT--AITPANEAILVTTPDITSLRDADRVIGL 228
           +   L   E G  D+++ID P G     +T   + P   A++VTTP   +  D  + + +
Sbjct: 281 INQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVAPLTAAVIVTTPQKLAFIDVAKGVRM 340

Query: 229 LECDGIRDIKMMVNRVRTD--------MIKGEDMMSVLDVQEMLGLALLGVIPEDSEVIR 288
                +  + ++ N    D          KG    S  +V +  G+  L  +P    +  
Sbjct: 341 FSKLKVPCVAVVENMCHFDADGKRYYPFGKG----SGSEVVKQFGIPHLFDLPIRPTLSA 400

Query: 289 STNRGYPLVLNKPPTLAGLAFEQAAWRLVEQ 303
           S + G P V++ P +     F+     +V+Q
Sbjct: 401 SGDSGTPEVVSDPLSDVARTFQDLGVCVVQQ 418

BLAST of CmaCh02G010790 vs. TAIR 10
Match: AT5G50960.1 (nucleotide binding protein 35 )

HSP 1 Score: 47.0 bits (110), Expect = 3.6e-05
Identity = 46/187 (24.60%), Postives = 83/187 (44.39%), Query Frame = 0

Query: 60  VVVTSGKGGVGKTTTTTNVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVL 119
           ++V SGKGGVGK+T +  +  +LA +   V  +D D+   ++  +LGLE +      E+ 
Sbjct: 62  ILVLSGKGGVGKSTFSAQLSFALAGMDHQVGLMDIDICGPSIPKMLGLEGQ------EIH 121

Query: 120 NGDCRLDQALVRDKRWSNFELLCISKPRSKLPMGIGGKALVW--------LVDALKAREE 179
             +       V D    N  ++ I        +    +A++W        +   LK    
Sbjct: 122 QSNLGWSPVYVED----NLGVMSIG-----FMLPNSDEAVIWRGPRKNGLIKQFLKDVYW 181

Query: 180 GCPDFILIDCPAGIDAGFITAI-----TPANEAILVTTPDITSLRDADRVIGLLECDGIR 234
           G  D++++D P G     I+ +     T  + AI+VTTP   SL D  + +   +  G+ 
Sbjct: 182 GEIDYLVVDAPPGTSDEHISIVQYLLPTGIDGAIIVTTPQEVSLIDVRKEVSFCKKVGVP 233

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9MBA28.9e-14282.54Putative septum site-determining protein minD homolog, chloroplastic OS=Arabidop... [more]
Q20EV41.9e-8363.28Putative septum site-determining protein MinD OS=Oltmannsiellopsis viridis OX=51... [more]
Q9MUM53.5e-8263.04Putative septum site-determining protein MinD OS=Mesostigma viride OX=41882 GN=m... [more]
P563466.7e-8165.02Putative septum site-determining protein MinD OS=Chlorella vulgaris OX=3077 GN=m... [more]
Q3ZIZ06.2e-7964.20Putative septum site-determining protein MinD OS=Tupiella akineta OX=160070 GN=m... [more]
Match NameE-valueIdentityDescription
AT5G24020.16.3e-14382.54septum site-determining protein (MIND) [more]
AT4G19540.15.4e-0923.40IND1(iron-sulfur protein required for NADH dehydrogenase)-like [more]
AT3G24430.19.4e-0622.51ATP binding [more]
AT5G50960.13.6e-0524.60nucleotide binding protein 35 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002586CobQ/CobB/MinD/ParA nucleotide binding domainPFAMPF01656CbiAcoord: 60..278
e-value: 1.8E-22
score: 79.7
IPR010223ATP binding protein MinDTIGRFAMTIGR01968TIGR01968coord: 58..310
e-value: 3.8E-96
score: 319.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 57..312
e-value: 3.3E-61
score: 209.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 57..303
NoneNo IPR availablePANTHERPTHR43384SEPTUM SITE-DETERMINING PROTEIN MIND HOMOLOG, CHLOROPLASTIC-RELATEDcoord: 36..318
NoneNo IPR availablePANTHERPTHR43384:SF6SEPTUM SITE-DETERMINING PROTEIN MIND HOMOLOG, CHLOROPLASTIC-RELATEDcoord: 36..318
NoneNo IPR availableCDDcd02036MinDcoord: 58..299
e-value: 8.22295E-105
score: 305.28

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh02G010790.1CmaCh02G010790.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051782 negative regulation of cell division
cellular_component GO:0009898 cytoplasmic side of plasma membrane
cellular_component GO:0005829 cytosol
molecular_function GO:0005524 ATP binding
molecular_function GO:0016887 ATP hydrolysis activity