CmaCh02G010190 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh02G010190
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	60S ribosomal protein L7a
Location	Cma_Chr02: 6046008 .. 6047878 (-)
RNA-Seq Expression	CmaCh02G010190
Synteny	CmaCh02G010190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATCCTTCTTCCTTTCTCGTTCAGTTCCCTTCTTGATCAATAGCTTAGAGACTTCATTTTTCGTTTTGTAGATATGTAATCCCCTTACTTTTGATTTTAGGTCAATCTCATAGTTATTCAAATTCTTTGCATTTTTCAACGTTTATTGACATGATCTTCTTGTAATCTTGAAAGGCACCGAAGAAGGCCGTTGGAAAAGTTTCGGCAAAAAAGAAGCCGGTGAATGATTGTTTTTTTTTTTTTCTTCTTCTTTCCATTTGATAGGTATTTGTTGTTTCAGTAATCGGTTGCTTCGGCTTGATATTGTTGGATTGTTTTCAGGTGAAGGTGGTGAATCCACTATTCGAGAAGCGTCCGAAGCAGTTTGGAATCGGCGGGGCATTGCCTCCTAAAAGGGATCTGACAAGGTTCGTCAAATGGCCGAAAGCTGTTCAAATTCAGAGGAAGAAAAGGATTCTCAAGCAGAGGCTGAAGGTTCCACCTGCTTTGAATCAGTTCACCAAGACACTTGACAAGAATCTTGGTAATAAAATCGAATAACTATGTTAGTAGATTAGTCGAGATTTTTTATATCAAATTCTATCCTTCTTTGTTTTTGCAGTACGCTGAACTCTCTCCTTTGTAATTAAGCATGAAATTTGTAAGGTTATAGGAGCTACGATTAGTTGTTGAAGGTTTGGTTTGGCTACCTTGAGATACTATGTTTTAATTGACAATGCAAGTTAATTTTGAGGGATGGCAGCGGACTTGGATATCTCAGAATCCTGATTCTTGACCAAACCTAATTTCCTGTTAGGTTTCTTGGATTATGTTTAGACCTTTTCACATTTTTGTTCATTCAGAAGTTCTAATGGTTGAATTTATTAATAGATGGTCGCAAATTGCTTTTGTGTCTTTCCTTATTCCAGCAAGTTCATCTGGATCATCTTCTTGGTTTTGGTTGGATTTGAAGTGTATATTTTCCTTTGCCTCTTGCCTTGATTCCTTTCTGTTTGTTGTGAAGTGTTTAGAGTGTTGGTTTTAATTACCTTGTTACGCTTATGCAGCAACAAACTTGTTCAAGATGCTTCTGAAGTATAGGCCTGAGGATAAAGCACAGAAGAGGGAGCGTCTTTTGAAGAGAGCGCAGGAAGAGGCCGAAGGCAAATCACATGATGCGAAAAAGCCTATTGTTGTTAAGTATGGTCTCAACCACGTAACCTACCTCATTGAGCAGGTAAACGCCTATTCATACATGTGAAATGTTTCACTCTTTTCAGTCACAATGTTTATCTGCAATCAGATACACTCCTGTATTTATAACAGCCACGTAAATTTACGTTCTTTTTAGAACAAGGCACAGCTCGTTGTGATTGCGCACGATGTGGATCCGATTGAGTTGGTCGTTTGGCTCCCAGCTTTGTGCAGGAAGATGGAAATCCCATATTGCATTGTGAAGGGAAAAGCGAGATTAGGAGCGGTAACCTTTTCCTTTTTGTTTTCCGAACGCACATTTCCAATTTTATTAATCCCAGGAACAGCTGTTTGAAATTTGTTTCCTTTTTATAGATTGTCCATCAAAAGACTGCGTCAGTTTTGTGCTTGACAACCGTAAAGAACGAAGATAAGTTGGAGTTCAGCAGAATCCTCGAAGCGATAAAGGTGACTAGAACATTTAAAATATATGCCACACTTGACTAGTCCATATATGTATAGCTTTTCTTAGTACCATTGCTGCTCTGTACTGTTTGTGAAGGCCAACTTCAACGACAAGTACGATGAGTACAGGAAGAAGTGGGGCGGTGGAATCATGGGTTCTAAGTCACAGGCCAAAACCAAAGCAAAGGAGAGGCTCCTTGCCAAGGAAGCTGCTCAAAGGATGTCTTAG

mRNA sequence

ATGGTATCCTTCTTCCTTTCTCGTTCAGTTCCCTTCTTGATCAATAGCTTAGAGACTTCATTTTTCGCACCGAAGAAGGCCGTTGGAAAAGTTTCGGCAAAAAAGAAGCCGGTGAAGGTGGTGAATCCACTATTCGAGAAGCGTCCGAAGCAGTTTGGAATCGGCGGGGCATTGCCTCCTAAAAGGGATCTGACAAGGTTCGTCAAATGGCCGAAAGCTGTTCAAATTCAGAGGAAGAAAAGGATTCTCAAGCAGAGGCTGAAGGTTCCACCTGCTTTGAATCAGTTCACCAAGACACTTGACAAGAATCTTGCAACAAACTTGTTCAAGATGCTTCTGAAGTATAGGCCTGAGGATAAAGCACAGAAGAGGGAGCGTCTTTTGAAGAGAGCGCAGGAAGAGGCCGAAGGCAAATCACATGATGCGAAAAAGCCTATTGTTGTTAAGTATGGTCTCAACCACGTAACCTACCTCATTGAGCAGAACAAGGCACAGCTCGTTGTGATTGCGCACGATGTGGATCCGATTGAGTTGGTCGTTTGGCTCCCAGCTTTGTGCAGGAAGATGGAAATCCCATATTGCATTGTGAAGGGAAAAGCGAGATTAGGAGCGATTGTCCATCAAAAGACTGCGTCAGTTTTGTGCTTGACAACCGTAAAGAACGAAGATAAGTTGGAGTTCAGCAGAATCCTCGAAGCGATAAAGGCCAACTTCAACGACAAGTACGATGAGTACAGGAAGAAGTGGGGCGGTGGAATCATGGGTTCTAAGTCACAGGCCAAAACCAAAGCAAAGGAGAGGCTCCTTGCCAAGGAAGCTGCTCAAAGGATGTCTTAG

Coding sequence (CDS)

ATGGTATCCTTCTTCCTTTCTCGTTCAGTTCCCTTCTTGATCAATAGCTTAGAGACTTCATTTTTCGCACCGAAGAAGGCCGTTGGAAAAGTTTCGGCAAAAAAGAAGCCGGTGAAGGTGGTGAATCCACTATTCGAGAAGCGTCCGAAGCAGTTTGGAATCGGCGGGGCATTGCCTCCTAAAAGGGATCTGACAAGGTTCGTCAAATGGCCGAAAGCTGTTCAAATTCAGAGGAAGAAAAGGATTCTCAAGCAGAGGCTGAAGGTTCCACCTGCTTTGAATCAGTTCACCAAGACACTTGACAAGAATCTTGCAACAAACTTGTTCAAGATGCTTCTGAAGTATAGGCCTGAGGATAAAGCACAGAAGAGGGAGCGTCTTTTGAAGAGAGCGCAGGAAGAGGCCGAAGGCAAATCACATGATGCGAAAAAGCCTATTGTTGTTAAGTATGGTCTCAACCACGTAACCTACCTCATTGAGCAGAACAAGGCACAGCTCGTTGTGATTGCGCACGATGTGGATCCGATTGAGTTGGTCGTTTGGCTCCCAGCTTTGTGCAGGAAGATGGAAATCCCATATTGCATTGTGAAGGGAAAAGCGAGATTAGGAGCGATTGTCCATCAAAAGACTGCGTCAGTTTTGTGCTTGACAACCGTAAAGAACGAAGATAAGTTGGAGTTCAGCAGAATCCTCGAAGCGATAAAGGCCAACTTCAACGACAAGTACGATGAGTACAGGAAGAAGTGGGGCGGTGGAATCATGGGTTCTAAGTCACAGGCCAAAACCAAAGCAAAGGAGAGGCTCCTTGCCAAGGAAGCTGCTCAAAGGATGTCTTAG

Protein sequence

MVSFFLSRSVPFLINSLETSFFAPKKAVGKVSAKKKPVKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS

Homology

[Close]

BLAST of CmaCh02G010190 vs. ExPASy Swiss-Prot
Match: Q9LZH9 (60S ribosomal protein L7a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7AB PE=1 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 1.8e-121
Identity = 219/256 (85.55%), Postives = 246/256 (96.09%), Query Frame = 0


Query: 23  APKKAVGKVSAKKKPVKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI 82
           APKK V KV++KKKP KV NPLFE+RPKQFGIGGALPPK+DL+R++KWPK++++QR+KRI
Sbjct: 2   APKKGV-KVASKKKPEKVTNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKRI 61

Query: 83  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDA 142
           LKQRLKVPPALNQFTKTLDKNLAT+LFK+LLKYRPEDKA K+ERLL +AQ EAEGK  ++
Sbjct: 62  LKQRLKVPPALNQFTKTLDKNLATSLFKILLKYRPEDKAAKKERLLNKAQAEAEGKPAES 121

Query: 143 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 202
           KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK+RL
Sbjct: 122 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRL 181

Query: 203 GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 262
           GA+VHQKTA+ LCLTTVKNEDKLEFS+ILEAIKANFNDKY+EYRKKWGGGIMGSKSQAKT
Sbjct: 182 GAVVHQKTAAALCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAKT 241

Query: 263 KAKERLLAKEAAQRMS 279
           KAKER++AKEAAQRM+
Sbjct: 242 KAKERVIAKEAAQRMN 256

[Close]

BLAST of CmaCh02G010190 vs. ExPASy Swiss-Prot
Match: P49692 (60S ribosomal protein L7a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL7AA PE=2 SV=2)

HSP 1 Score: 432.2 bits (1110), Expect = 4.5e-120
Identity = 220/257 (85.60%), Postives = 246/257 (95.72%), Query Frame = 0


Query: 23  APKKAVGKVSAKKKPV-KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR 82
           APKK V KV+AKKK   KV NPLFE+RPKQFGIGGALPPK+DL+R++KWPK++++QR+KR
Sbjct: 2   APKKGV-KVAAKKKTAEKVSNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKR 61

Query: 83  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHD 142
           ILKQRLKVPPALNQFTKTLDKNLAT+LFK+LLKYRPEDKA K+ERL+K+AQ EAEGK  +
Sbjct: 62  ILKQRLKVPPALNQFTKTLDKNLATSLFKVLLKYRPEDKAAKKERLVKKAQAEAEGKPSE 121

Query: 143 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 202
           +KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK+R
Sbjct: 122 SKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSR 181

Query: 203 LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 262
           LGA+VHQKTAS LCLTTVKNEDKLEFS+ILEAIKANFNDKY+EYRKKWGGGIMGSKSQAK
Sbjct: 182 LGAVVHQKTASCLCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAK 241

Query: 263 TKAKERLLAKEAAQRMS 279
           TKAKER++AKEAAQRM+
Sbjct: 242 TKAKERVIAKEAAQRMN 257

[Close]

BLAST of CmaCh02G010190 vs. ExPASy Swiss-Prot
Match: P35685 (60S ribosomal protein L7a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-1 PE=2 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 4.5e-120
Identity = 223/257 (86.77%), Postives = 242/257 (94.16%), Query Frame = 0


Query: 23  APKK-AVGKVSAKKKPVKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR 82
           APK+     V AKKK  KV NPLFEKRPKQFGIGGALPPK+DL RFVKWPK V+IQR++R
Sbjct: 2   APKRGGRAPVPAKKKTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRR 61

Query: 83  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHD 142
           ILKQRLKVPPALNQFT+TLDKNLATNLFKMLLKYRPEDKA K+ERLLKRAQ EAEGK+ +
Sbjct: 62  ILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPEDKAAKKERLLKRAQAEAEGKTVE 121

Query: 143 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 202
           AKKPIVVKYGLNHVTYLIEQ+KAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGKAR
Sbjct: 122 AKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKAR 181

Query: 203 LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 262
           LG+IVH+KTASVLCLTTVKNEDKLEFS+ILEAIKANFNDK+DE RKKWGGG+MGSKSQAK
Sbjct: 182 LGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAK 241

Query: 263 TKAKERLLAKEAAQRMS 279
           TKA+E+LLAKEAAQRM+
Sbjct: 242 TKAREKLLAKEAAQRMT 258

[Close]

BLAST of CmaCh02G010190 vs. ExPASy Swiss-Prot
Match: P0DKK7 (60S ribosomal protein L7a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-2 PE=2 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 4.5e-120
Identity = 223/257 (86.77%), Postives = 242/257 (94.16%), Query Frame = 0


Query: 23  APKK-AVGKVSAKKKPVKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR 82
           APK+     V AKKK  KV NPLFEKRPKQFGIGGALPPK+DL RFVKWPK V+IQR++R
Sbjct: 2   APKRGGRAPVPAKKKTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRR 61

Query: 83  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHD 142
           ILKQRLKVPPALNQFT+TLDKNLATNLFKMLLKYRPEDKA K+ERLLKRAQ EAEGK+ +
Sbjct: 62  ILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPEDKAAKKERLLKRAQAEAEGKTVE 121

Query: 143 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 202
           AKKPIVVKYGLNHVTYLIEQ+KAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGKAR
Sbjct: 122 AKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKAR 181

Query: 203 LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 262
           LG+IVH+KTASVLCLTTVKNEDKLEFS+ILEAIKANFNDK+DE RKKWGGG+MGSKSQAK
Sbjct: 182 LGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAK 241

Query: 263 TKAKERLLAKEAAQRMS 279
           TKA+E+LLAKEAAQRM+
Sbjct: 242 TKAREKLLAKEAAQRMT 258

[Close]

BLAST of CmaCh02G010190 vs. ExPASy Swiss-Prot
Match: O57592 (60S ribosomal protein L7a OS=Takifugu rubripes OX=31033 GN=rpl7a PE=3 SV=3)

HSP 1 Score: 285.4 bits (729), Expect = 6.8e-76
Identity = 149/261 (57.09%), Postives = 195/261 (74.71%), Query Frame = 0


Query: 25  KKAVGK-------VSAKKKPVKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQ 84
           KKA GK       V+ K +  KVVNPLFEKRPK FGIG  + PKRDLTRFVKWP+ +++Q
Sbjct: 5   KKAKGKKVAPAPSVAKKHEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQ 64

Query: 85  RKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEG 144
           R++ IL +RLKVPPA+NQFT+ LD+  AT LFK+  KYRPE K +K++RLL RA+++A G
Sbjct: 65  RQRSILYKRLKVPPAINQFTQALDRQTATQLFKLAHKYRPETKQEKKKRLLARAEQKAAG 124

Query: 145 KSH-DAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIV 204
           K     K+P V++ G+N +T L+E  KAQLVVIAHDVDPIELV++LPALCRKM +PYCIV
Sbjct: 125 KGDAPTKRPPVLRAGVNTITSLVENKKAQLVVIAHDVDPIELVIFLPALCRKMGVPYCIV 184

Query: 205 KGKARLGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGS 264
           KGKARLG +VH+KT + +  T    EDK   ++++EAIK N+ND+Y+E R+ WGGGI+G 
Sbjct: 185 KGKARLGRLVHRKTCTSVAFTQTNPEDKGALAKLVEAIKTNYNDRYEEIRRHWGGGILGP 244

Query: 265 KSQAKTKAKERLLAKEAAQRM 278
           KS A+    E+  AKE A ++
Sbjct: 245 KSTARINKLEKAKAKELATKL 265

[Close]

BLAST of CmaCh02G010190 vs. TAIR 10
Match: AT3G62870.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 436.8 bits (1122), Expect = 1.3e-122
Identity = 219/256 (85.55%), Postives = 246/256 (96.09%), Query Frame = 0


Query: 23  APKKAVGKVSAKKKPVKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKRI 82
           APKK V KV++KKKP KV NPLFE+RPKQFGIGGALPPK+DL+R++KWPK++++QR+KRI
Sbjct: 2   APKKGV-KVASKKKPEKVTNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKRI 61

Query: 83  LKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHDA 142
           LKQRLKVPPALNQFTKTLDKNLAT+LFK+LLKYRPEDKA K+ERLL +AQ EAEGK  ++
Sbjct: 62  LKQRLKVPPALNQFTKTLDKNLATSLFKILLKYRPEDKAAKKERLLNKAQAEAEGKPAES 121

Query: 143 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARL 202
           KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK+RL
Sbjct: 122 KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRL 181

Query: 203 GAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKT 262
           GA+VHQKTA+ LCLTTVKNEDKLEFS+ILEAIKANFNDKY+EYRKKWGGGIMGSKSQAKT
Sbjct: 182 GAVVHQKTAAALCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAKT 241

Query: 263 KAKERLLAKEAAQRMS 279
           KAKER++AKEAAQRM+
Sbjct: 242 KAKERVIAKEAAQRMN 256

[Close]

BLAST of CmaCh02G010190 vs. TAIR 10
Match: AT2G47610.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 432.2 bits (1110), Expect = 3.2e-121
Identity = 220/257 (85.60%), Postives = 246/257 (95.72%), Query Frame = 0


Query: 23  APKKAVGKVSAKKKPV-KVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKAVQIQRKKR 82
           APKK V KV+AKKK   KV NPLFE+RPKQFGIGGALPPK+DL+R++KWPK++++QR+KR
Sbjct: 2   APKKGV-KVAAKKKTAEKVSNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQKR 61

Query: 83  ILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAQKRERLLKRAQEEAEGKSHD 142
           ILKQRLKVPPALNQFTKTLDKNLAT+LFK+LLKYRPEDKA K+ERL+K+AQ EAEGK  +
Sbjct: 62  ILKQRLKVPPALNQFTKTLDKNLATSLFKVLLKYRPEDKAAKKERLVKKAQAEAEGKPSE 121

Query: 143 AKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKAR 202
           +KKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK+R
Sbjct: 122 SKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSR 181

Query: 203 LGAIVHQKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAK 262
           LGA+VHQKTAS LCLTTVKNEDKLEFS+ILEAIKANFNDKY+EYRKKWGGGIMGSKSQAK
Sbjct: 182 LGAVVHQKTASCLCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAK 241

Query: 263 TKAKERLLAKEAAQRMS 279
           TKAKER++AKEAAQRM+
Sbjct: 242 TKAKERVIAKEAAQRMN 257

[Close]

BLAST of CmaCh02G010190 vs. TAIR 10
Match: AT4G22380.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 43.5 bits (101), Expect = 3.2e-04
Identity = 22/79 (27.85%), Postives = 37/79 (46.84%), Query Frame = 0


Query: 148 VKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVH 207
           +K G N  T  + +  ++ VV+A D +P+E+++ LP L     +PY  V  K  LG    
Sbjct: 35  LKKGANEATKTLNRGISEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACG 94

Query: 208 QKTASVLCLTTVKNEDKLE 227
                + C  T     +L+
Sbjct: 95  VTRPVIACSVTSNEASQLK 113

[Close]

BLAST of CmaCh02G010190 vs. TAIR 10
Match: AT4G12600.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 43.5 bits (101), Expect = 3.2e-04
Identity = 21/79 (26.58%), Postives = 37/79 (46.84%), Query Frame = 0


Query: 148 VKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVH 207
           +K G N  T  + +  ++ +V+A D +P+E+++ LP L     +PY  V  K  LG    
Sbjct: 35  LKKGANEATKTLNRGISEFIVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACD 94

Query: 208 QKTASVLCLTTVKNEDKLE 227
                + C  T     +L+
Sbjct: 95  VTRPVIACSVTSNEASQLK 113

[Close]

BLAST of CmaCh02G010190 vs. TAIR 10
Match: AT5G20160.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 43.5 bits (101), Expect = 3.2e-04
Identity = 22/79 (27.85%), Postives = 37/79 (46.84%), Query Frame = 0


Query: 148 VKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGAIVH 207
           +K G N  T  + +  ++ VV+A D +P+E+++ LP L     +PY  V  K  LG    
Sbjct: 35  LKKGANEATKTLNRGISEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACG 94

Query: 208 QKTASVLCLTTVKNEDKLE 227
                + C  T     +L+
Sbjct: 95  VTRPVIACSVTSNEASQLK 113

The following BLAST results are available for this feature:

BLAST of CmaCh02G010190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZH9	1.8e-121	85.55	60S ribosomal protein L7a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7AB PE=1 SV=1	[more]
P49692	4.5e-120	85.60	60S ribosomal protein L7a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL7AA PE=2 SV=2	[more]
P35685	4.5e-120	86.77	60S ribosomal protein L7a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-1 ...	[more]
P0DKK7	4.5e-120	86.77	60S ribosomal protein L7a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-2 ...	[more]
O57592	6.8e-76	57.09	60S ribosomal protein L7a OS=Takifugu rubripes OX=31033 GN=rpl7a PE=3 SV=3	[more]

BLAST of CmaCh02G010190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62870.1	1.3e-122	85.55	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT2G47610.1	3.2e-121	85.60	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT4G22380.1	3.2e-04	27.85	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT4G12600.1	3.2e-04	26.58	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT5G20160.1	3.2e-04	27.85	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001921	Ribosomal protein L7A/L8	PRINTS	PR00882	RIBOSOMALL7A	coord: 86..105 score: 74.09 coord: 66..83 score: 60.1 coord: 205..229 score: 48.36 coord: 144..164 score: 62.77 coord: 49..66 score: 71.21 coord: 237..257 score: 68.4 coord: 110..123 score: 62.34
IPR018492	Ribosomal protein L7Ae/L8/Nhp2 family	PRINTS	PR00881	L7ARS6FAMILY	coord: 167..180 score: 71.43 coord: 183..193 score: 64.46 coord: 148..162 score: 45.76 coord: 193..207 score: 56.36
IPR004038	Ribosomal protein L7Ae/L30e/S12e/Gadd45	PFAM	PF01248	Ribosomal_L7Ae	coord: 135..225 e-value: 2.4E-25 score: 88.1
IPR029064	50S ribosomal protein L30e-like	GENE3D	3.30.1330.30		coord: 70..253 e-value: 1.9E-81 score: 274.1
IPR029064	50S ribosomal protein L30e-like	SUPERFAMILY	55315	L30e-like	coord: 108..249
None	No IPR available	PANTHER	PTHR23105:SF168	BNAA03G47020D PROTEIN	coord: 14..276
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 14..276
IPR004037	Ribosomal protein L7Ae conserved site	PROSITE	PS01082	RIBOSOMAL_L7AE	coord: 186..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G010190.1	CmaCh02G010190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000470	maturation of LSU-rRNA
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0003723	RNA binding