CmaCh02G009070 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh02G009070
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	ethylene-responsive transcription factor ERF061-like
Location	Cma_Chr02: 5406104 .. 5407003 (-)
RNA-Seq Expression	CmaCh02G009070
Synteny	CmaCh02G009070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAACGATGACGAACAGAGGAACCCTTCAATTTACGGATGTTTCAACGGCTCTTTCCAATCTCATTCTAACTGCCGGAGGAAATACTCTGGATTCAATCTTCTCTCACTGTGACAATTTCAGCCGCTCTGTAATCGATGGCGTAGATTTCGAGCAGGCAGTTGGGTCGTCGGTGTATCTCCGACAGCGGGAAGTACTGCAGAGATTTTCTCAGGAAAGGAAAGCAAATGGGTCTCGGGATTTATTTGCAAAGGCATACGAAGTGCTGTATTCGGGTTGCGGCGCTGCCGTTGGTGGCGGCAAGAGGAAGGTTTACAGAGGAGTGCGGCAGAGGCAATGGGGGAAATGGGTGGCGGAGATTCGACTGCCGCAGAATCGGATGAGGGTGTGGTTAGGAACATATGACTCGCCGGAGACCGCCGCCTATGCTTACGACTGCGCCGCCTGTAAGCTCCGAGGGGAATATGCTCGGTTGAATTTTCCAAATTTGAAGGATCTAAAGAGCGATTTAGGTAGCGATGAGTTTGTGAAATTGAGTGGGTTGAAAAAATTGGTGGATGCCAAAATTCAAGCGATTTTTCAGAAGATAAAGGGGAAGGGGAAGAAGAAGGATTGTCGGAGAATCGGCAGCGATTTAGGTTCGGGTTCGTGTTCTTCGTCGTCACCGTCGGTGTCTCTGCCTCCAGCGGTAGTGGAGATGACGGAGAAGTGGAGTTGGGAAAGGGTATCGGCTGTTGGTGCAGCGGAAGATGGGTTGTGGAACTTTGAGAACTCGCCTCGAGCTGGTTCAGTGGATTGCTTGACGGCGACGGCGACGGGATCGGAAACAGAGTGGTACTCGTTGGAGAAGATGCCTTCTTTTGATGCAGAGCAGATTTGGGATGTTCTTGCAATCTAG

mRNA sequence

ATGGAAACGATGACGAACAGAGGAACCCTTCAATTTACGGATGTTTCAACGGCTCTTTCCAATCTCATTCTAACTGCCGGAGGAAATACTCTGGATTCAATCTTCTCTCACTGTGACAATTTCAGCCGCTCTGTAATCGATGGCGTAGATTTCGAGCAGGCAGTTGGGTCGTCGGTGTATCTCCGACAGCGGGAAGTACTGCAGAGATTTTCTCAGGAAAGGAAAGCAAATGGGTCTCGGGATTTATTTGCAAAGGCATACGAAGTGCTGTATTCGGGTTGCGGCGCTGCCGTTGGTGGCGGCAAGAGGAAGGTTTACAGAGGAGTGCGGCAGAGGCAATGGGGGAAATGGGTGGCGGAGATTCGACTGCCGCAGAATCGGATGAGGGTGTGGTTAGGAACATATGACTCGCCGGAGACCGCCGCCTATGCTTACGACTGCGCCGCCTGTAAGCTCCGAGGGGAATATGCTCGGTTGAATTTTCCAAATTTGAAGGATCTAAAGAGCGATTTAGGTAGCGATGAGTTTGTGAAATTGAGTGGGTTGAAAAAATTGGTGGATGCCAAAATTCAAGCGATTTTTCAGAAGATAAAGGGGAAGGGGAAGAAGAAGGATTGTCGGAGAATCGGCAGCGATTTAGGTTCGGGTTCGTGTTCTTCGTCGTCACCGTCGGTGTCTCTGCCTCCAGCGGTAGTGGAGATGACGGAGAAGTGGAGTTGGGAAAGGGTATCGGCTGTTGGTGCAGCGGAAGATGGGTTGTGGAACTTTGAGAACTCGCCTCGAGCTGGTTCAGTGGATTGCTTGACGGCGACGGCGACGGGATCGGAAACAGAGTGGTACTCGTTGGAGAAGATGCCTTCTTTTGATGCAGAGCAGATTTGGGATGTTCTTGCAATCTAG

Coding sequence (CDS)

ATGGAAACGATGACGAACAGAGGAACCCTTCAATTTACGGATGTTTCAACGGCTCTTTCCAATCTCATTCTAACTGCCGGAGGAAATACTCTGGATTCAATCTTCTCTCACTGTGACAATTTCAGCCGCTCTGTAATCGATGGCGTAGATTTCGAGCAGGCAGTTGGGTCGTCGGTGTATCTCCGACAGCGGGAAGTACTGCAGAGATTTTCTCAGGAAAGGAAAGCAAATGGGTCTCGGGATTTATTTGCAAAGGCATACGAAGTGCTGTATTCGGGTTGCGGCGCTGCCGTTGGTGGCGGCAAGAGGAAGGTTTACAGAGGAGTGCGGCAGAGGCAATGGGGGAAATGGGTGGCGGAGATTCGACTGCCGCAGAATCGGATGAGGGTGTGGTTAGGAACATATGACTCGCCGGAGACCGCCGCCTATGCTTACGACTGCGCCGCCTGTAAGCTCCGAGGGGAATATGCTCGGTTGAATTTTCCAAATTTGAAGGATCTAAAGAGCGATTTAGGTAGCGATGAGTTTGTGAAATTGAGTGGGTTGAAAAAATTGGTGGATGCCAAAATTCAAGCGATTTTTCAGAAGATAAAGGGGAAGGGGAAGAAGAAGGATTGTCGGAGAATCGGCAGCGATTTAGGTTCGGGTTCGTGTTCTTCGTCGTCACCGTCGGTGTCTCTGCCTCCAGCGGTAGTGGAGATGACGGAGAAGTGGAGTTGGGAAAGGGTATCGGCTGTTGGTGCAGCGGAAGATGGGTTGTGGAACTTTGAGAACTCGCCTCGAGCTGGTTCAGTGGATTGCTTGACGGCGACGGCGACGGGATCGGAAACAGAGTGGTACTCGTTGGAGAAGATGCCTTCTTTTGATGCAGAGCAGATTTGGGATGTTCTTGCAATCTAG

Protein sequence

METMTNRGTLQFTDVSTALSNLILTAGGNTLDSIFSHCDNFSRSVIDGVDFEQAVGSSVYLRQREVLQRFSQERKANGSRDLFAKAYEVLYSGCGAAVGGGKRKVYRGVRQRQWGKWVAEIRLPQNRMRVWLGTYDSPETAAYAYDCAACKLRGEYARLNFPNLKDLKSDLGSDEFVKLSGLKKLVDAKIQAIFQKIKGKGKKKDCRRIGSDLGSGSCSSSSPSVSLPPAVVEMTEKWSWERVSAVGAAEDGLWNFENSPRAGSVDCLTATATGSETEWYSLEKMPSFDAEQIWDVLAI

Homology

[Close]

BLAST of CmaCh02G009070 vs. ExPASy Swiss-Prot
Match: Q9C7W2 (Ethylene-responsive transcription factor ERF061 OS=Arabidopsis thaliana OX=3702 GN=ERF061 PE=2 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.4e-50
Identity = 142/328 (43.29%), Postives = 186/328 (56.71%), Query Frame = 0


Query: 6   NRGTLQFTDVSTALSNLILTAGGNTLDSIFSHCDNFS-RSVIDGVDFEQ-----AVGSSV 65
           N  + + +++  +LS +IL  G NTLDSIFS     S  S     +         +GSSV
Sbjct: 10  NNFSPKISEIRASLSQIILAGGPNTLDSIFSLLTPSSVESATTSFNTHNPPPPPQLGSSV 69

Query: 66  YLRQREVLQRFSQERKANGS--RDLFAKAYE-------VLYSGCG-------AAVGGG-- 125
           YLRQR+++++F  + +A  +    LF+  Y+       +L +  G       AA+  G  
Sbjct: 70  YLRQRDIIEKFHLQNRAISTPHPPLFSSTYDHHQTSELMLQAAAGSPAAAFAAALAAGRV 129

Query: 126 --KRKVYRGVRQRQWGKWVAEIRLPQNRMRVWLGTYDSPETAAYAYDCAACKLRGEYARL 185
             K+K+YRGVRQR WGKWVAEIRLPQNRMRVWLGTYD+ E AAYAYD AA KLRGEYARL
Sbjct: 130 TKKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAAYKLRGEYARL 189

Query: 186 NFPNLKDLKSDLGSDEFVKLSGLKKLVDAKIQAIFQKIKGKGKKKDCR--RIGSDLGSGS 245
           NFPNLKD    LG  +  KL  LK  VD KIQ+I Q+++ +  KK  +  +  S     S
Sbjct: 190 NFPNLKDPSELLGLGDSSKLIALKNAVDGKIQSICQRVRKERAKKSVKVSKNSSATADSS 249

Query: 246 CSSSSPSVSLPPAVVEMTEKWSWERVSAVGAAEDGLWNFEN-SPRAGSVDC-LTATA--- 299
           C SS   +S  P     T   S +   +   +  GL N EN SP + SV   + ATA   
Sbjct: 250 CLSSPEILSSSPVTTTTTAVTSED---SYWVSPMGLCNSENSSPVSVSVPSEVPATAEEE 309

[Close]

BLAST of CmaCh02G009070 vs. ExPASy Swiss-Prot
Match: Q8H1E4 (Ethylene-responsive transcription factor RAP2-4 OS=Arabidopsis thaliana OX=3702 GN=RAP2-4 PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.6e-28
Identity = 85/205 (41.46%), Postives = 112/205 (54.63%), Query Frame = 0


Query: 95  GAAVGGGKRKVYRGVRQRQWGKWVAEIRLPQNRMRVWLGTYDSPETAAYAYDCAACKLRG 154
           G+ V     K+YRGVRQR WGKWVAEIRLP+NR R+WLGT+D+ E AA AYD AA KLRG
Sbjct: 141 GSGVPSKPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRG 200

Query: 155 EYARLNFPNLKDLKSDLGSDEFVKLSGLKKLVDAKIQAIFQKIKGKGKKKDCRRIGSDLG 214
           ++ARLNFPNL+   S +G D F +   L   VDAK++AI + +    K+        D  
Sbjct: 201 DFARLNFPNLRHNGSHIGGD-FGEYKPLHSSVDAKLEAICKSMAETQKQ--------DKS 260

Query: 215 SGSCSSSSPSVSLPPAVVEMTEKWSWERVSAVGAAEDGLWNFENSPRAGS-VDCLTATAT 274
           + S       VS P    +++EK   E  S        +  FE S    S +  LT    
Sbjct: 261 TKSSKKREKKVSSP----DLSEKVKAEENSVSIGGSPPVTEFEESTAGSSPLSDLTFADP 320

Query: 275 GSETEW---YSLEKMPSFDAEQIWD 296
               +W   +SLEK PS++ +  WD
Sbjct: 321 EEPPQWNETFSLEKYPSYEID--WD 330

[Close]

BLAST of CmaCh02G009070 vs. ExPASy Swiss-Prot
Match: O65665 (Ethylene-responsive transcription factor ERF060 OS=Arabidopsis thaliana OX=3702 GN=ERF060 PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.8e-24
Identity = 79/197 (40.10%), Postives = 106/197 (53.81%), Query Frame = 0


Query: 103 RKVYRGVRQRQWGKWVAEIRLPQNRMRVWLGTYDSPETAAYAYDCAACKLRGEYARLNFP 162
           +K+YRGVRQR WGKWVAEIRLP+NR R+WLGT+D+ E AA AYD AA KLRGE+ARLNFP
Sbjct: 90  QKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAAMAYDLAAYKLRGEFARLNFP 149

Query: 163 NLKDLKSDLGSDEFVKLSGLKKLVDAKIQAIFQKIKGKGKKKDCRRIGSDLGSGSCSSSS 222
             +      G       + L   VDAK+Q I Q ++   K +D      DL    CS + 
Sbjct: 150 QFRHEDGYYGGGSC--FNPLHSSVDAKLQEICQSLR---KTEDI-----DL---PCSETE 209

Query: 223 PSVSLPPAVVEMTEKWSWERVSAVGAAEDGLWNFENSPRAGSVDCLTATATG-SETEWYS 282
                PP       ++ + R S   +  D      +SP +G    L  + +G  E   + 
Sbjct: 210 ---LFPPKTEYQESEYGFLR-SDENSFSDESHVESSSPESGITTFLDFSDSGFDEIGSFG 267

Query: 283 LEKMPSFDAEQIWDVLA 299
           LEK PS + +  WD ++
Sbjct: 270 LEKFPSVEID--WDAIS 267

[Close]

BLAST of CmaCh02G009070 vs. ExPASy Swiss-Prot
Match: Q9LM15 (Ethylene-responsive transcription factor RAP2-13 OS=Arabidopsis thaliana OX=3702 GN=RAP2-13 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.5e-23
Identity = 85/221 (38.46%), Postives = 120/221 (54.30%), Query Frame = 0


Query: 79  SRDLFAKAYEVLYSGCGAAVGGGKRKVYRGVRQRQWGKWVAEIRLPQNRMRVWLGTYDSP 138
           S  L  K   +  +G  AA      K+YRGVRQR WGKWVAEIRLP+NR R+WLGT+D+ 
Sbjct: 59  SHHLSPKPVSMKQTGTSAA---KPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTA 118

Query: 139 ETAAYAYDCAACKLRGEYARLNFPNLKDLKSDLGSDEFVKLSGLKKLVDAKIQAIFQKIK 198
           E AA AYD AA KLRG++ARLNFP+L+       +DE+     L+  VDAK++AI Q + 
Sbjct: 119 EEAALAYDKAAYKLRGDFARLNFPDLRH------NDEY---QPLQSSVDAKLEAICQNL- 178

Query: 199 GKGKKKDCRRIGSDLGSGSCSSSSPSVSLPPAVVEMTEKWSWERVSAVGAAEDGLWNFEN 258
            +  +K  R   +   S    SS+ +V LP            E  S+ G++     ++ +
Sbjct: 179 AETTQKQVR--STKKSSSRKRSSTVAVKLPE-----------EDYSSAGSSPLLTESYGS 238

Query: 259 SPRAGSVDCLTATATGSETE--W--YSLEKMPSFDAEQIWD 296
              +  +  LT   T  E +  W   +LEK PS++ +  WD
Sbjct: 239 GGSSSPLSELTFGDTEEEIQPPWNENALEKYPSYEID--WD 251

[Close]

BLAST of CmaCh02G009070 vs. ExPASy Swiss-Prot
Match: Q9SVQ0 (Ethylene-responsive transcription factor ERF062 OS=Arabidopsis thaliana OX=3702 GN=ERF062 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.7e-22
Identity = 77/195 (39.49%), Postives = 97/195 (49.74%), Query Frame = 0


Query: 104 KVYRGVRQRQWGKWVAEIRLPQNRMRVWLGTYDSPETAAYAYDCAACKLRGEYARLNFPN 163
           K+YRGVRQR WGKWVAEIRLP+NR RVWLGT+++ E AA AYD AA  LRGE+A LNFP 
Sbjct: 230 KLYRGVRQRHWGKWVAEIRLPRNRTRVWLGTFETAEQAAMAYDTAAYILRGEFAHLNFP- 289

Query: 164 LKDLKSDLGSDEFVKLSGLKKLVDAKIQAIFQKIKGKGKKKDCRRIGSDLGSGSCSSSSP 223
             DLK  L S     +  +  L+++KIQ I                       S S  S 
Sbjct: 290 --DLKHQLKSGSLRCM--IASLLESKIQQI-----------------------SSSQVSN 349

Query: 224 SVSLPPAVVEMTEKWSWERVSAVGAAEDGLWNFENSPRAGSVDCLTATATGSETEWYSLE 283
           S S PP  V   E+ +       G  ED +   + S +              E +   L 
Sbjct: 350 SPSPPPPKVGTPEQKNHHMKMESG--EDVMMKKQKSHK-----------EVMEGDGVQLS 383

Query: 284 KMPSFDAEQIWDVLA 299
           +MPS D + IWD L+
Sbjct: 410 RMPSLDMDLIWDALS 383

[Close]

BLAST of CmaCh02G009070 vs. TAIR 10
Match: AT1G64380.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 200.7 bits (509), Expect = 1.7e-51
Identity = 142/328 (43.29%), Postives = 186/328 (56.71%), Query Frame = 0


Query: 6   NRGTLQFTDVSTALSNLILTAGGNTLDSIFSHCDNFS-RSVIDGVDFEQ-----AVGSSV 65
           N  + + +++  +LS +IL  G NTLDSIFS     S  S     +         +GSSV
Sbjct: 10  NNFSPKISEIRASLSQIILAGGPNTLDSIFSLLTPSSVESATTSFNTHNPPPPPQLGSSV 69

Query: 66  YLRQREVLQRFSQERKANGS--RDLFAKAYE-------VLYSGCG-------AAVGGG-- 125
           YLRQR+++++F  + +A  +    LF+  Y+       +L +  G       AA+  G  
Sbjct: 70  YLRQRDIIEKFHLQNRAISTPHPPLFSSTYDHHQTSELMLQAAAGSPAAAFAAALAAGRV 129

Query: 126 --KRKVYRGVRQRQWGKWVAEIRLPQNRMRVWLGTYDSPETAAYAYDCAACKLRGEYARL 185
             K+K+YRGVRQR WGKWVAEIRLPQNRMRVWLGTYD+ E AAYAYD AA KLRGEYARL
Sbjct: 130 TKKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAAYKLRGEYARL 189

Query: 186 NFPNLKDLKSDLGSDEFVKLSGLKKLVDAKIQAIFQKIKGKGKKKDCR--RIGSDLGSGS 245
           NFPNLKD    LG  +  KL  LK  VD KIQ+I Q+++ +  KK  +  +  S     S
Sbjct: 190 NFPNLKDPSELLGLGDSSKLIALKNAVDGKIQSICQRVRKERAKKSVKVSKNSSATADSS 249

Query: 246 CSSSSPSVSLPPAVVEMTEKWSWERVSAVGAAEDGLWNFEN-SPRAGSVDC-LTATA--- 299
           C SS   +S  P     T   S +   +   +  GL N EN SP + SV   + ATA   
Sbjct: 250 CLSSPEILSSSPVTTTTTAVTSED---SYWVSPMGLCNSENSSPVSVSVPSEVPATAEEE 309

[Close]

BLAST of CmaCh02G009070 vs. TAIR 10
Match: AT1G78080.1 (related to AP2 4 )

HSP 1 Score: 127.5 bits (319), Expect = 1.8e-29
Identity = 85/205 (41.46%), Postives = 112/205 (54.63%), Query Frame = 0


Query: 95  GAAVGGGKRKVYRGVRQRQWGKWVAEIRLPQNRMRVWLGTYDSPETAAYAYDCAACKLRG 154
           G+ V     K+YRGVRQR WGKWVAEIRLP+NR R+WLGT+D+ E AA AYD AA KLRG
Sbjct: 141 GSGVPSKPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRG 200

Query: 155 EYARLNFPNLKDLKSDLGSDEFVKLSGLKKLVDAKIQAIFQKIKGKGKKKDCRRIGSDLG 214
           ++ARLNFPNL+   S +G D F +   L   VDAK++AI + +    K+        D  
Sbjct: 201 DFARLNFPNLRHNGSHIGGD-FGEYKPLHSSVDAKLEAICKSMAETQKQ--------DKS 260

Query: 215 SGSCSSSSPSVSLPPAVVEMTEKWSWERVSAVGAAEDGLWNFENSPRAGS-VDCLTATAT 274
           + S       VS P    +++EK   E  S        +  FE S    S +  LT    
Sbjct: 261 TKSSKKREKKVSSP----DLSEKVKAEENSVSIGGSPPVTEFEESTAGSSPLSDLTFADP 320

Query: 275 GSETEW---YSLEKMPSFDAEQIWD 296
               +W   +SLEK PS++ +  WD
Sbjct: 321 EEPPQWNETFSLEKYPSYEID--WD 330

[Close]

BLAST of CmaCh02G009070 vs. TAIR 10
Match: AT4G39780.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 113.6 bits (283), Expect = 2.7e-25
Identity = 79/197 (40.10%), Postives = 106/197 (53.81%), Query Frame = 0


Query: 103 RKVYRGVRQRQWGKWVAEIRLPQNRMRVWLGTYDSPETAAYAYDCAACKLRGEYARLNFP 162
           +K+YRGVRQR WGKWVAEIRLP+NR R+WLGT+D+ E AA AYD AA KLRGE+ARLNFP
Sbjct: 90  QKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAAMAYDLAAYKLRGEFARLNFP 149

Query: 163 NLKDLKSDLGSDEFVKLSGLKKLVDAKIQAIFQKIKGKGKKKDCRRIGSDLGSGSCSSSS 222
             +      G       + L   VDAK+Q I Q ++   K +D      DL    CS + 
Sbjct: 150 QFRHEDGYYGGGSC--FNPLHSSVDAKLQEICQSLR---KTEDI-----DL---PCSETE 209

Query: 223 PSVSLPPAVVEMTEKWSWERVSAVGAAEDGLWNFENSPRAGSVDCLTATATG-SETEWYS 282
                PP       ++ + R S   +  D      +SP +G    L  + +G  E   + 
Sbjct: 210 ---LFPPKTEYQESEYGFLR-SDENSFSDESHVESSSPESGITTFLDFSDSGFDEIGSFG 267

Query: 283 LEKMPSFDAEQIWDVLA 299
           LEK PS + +  WD ++
Sbjct: 270 LEKFPSVEID--WDAIS 267

[Close]

BLAST of CmaCh02G009070 vs. TAIR 10
Match: AT1G22190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 111.7 bits (278), Expect = 1.0e-24
Identity = 85/221 (38.46%), Postives = 120/221 (54.30%), Query Frame = 0


Query: 79  SRDLFAKAYEVLYSGCGAAVGGGKRKVYRGVRQRQWGKWVAEIRLPQNRMRVWLGTYDSP 138
           S  L  K   +  +G  AA      K+YRGVRQR WGKWVAEIRLP+NR R+WLGT+D+ 
Sbjct: 59  SHHLSPKPVSMKQTGTSAA---KPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTA 118

Query: 139 ETAAYAYDCAACKLRGEYARLNFPNLKDLKSDLGSDEFVKLSGLKKLVDAKIQAIFQKIK 198
           E AA AYD AA KLRG++ARLNFP+L+       +DE+     L+  VDAK++AI Q + 
Sbjct: 119 EEAALAYDKAAYKLRGDFARLNFPDLRH------NDEY---QPLQSSVDAKLEAICQNL- 178

Query: 199 GKGKKKDCRRIGSDLGSGSCSSSSPSVSLPPAVVEMTEKWSWERVSAVGAAEDGLWNFEN 258
            +  +K  R   +   S    SS+ +V LP            E  S+ G++     ++ +
Sbjct: 179 AETTQKQVR--STKKSSSRKRSSTVAVKLPE-----------EDYSSAGSSPLLTESYGS 238

Query: 259 SPRAGSVDCLTATATGSETE--W--YSLEKMPSFDAEQIWD 296
              +  +  LT   T  E +  W   +LEK PS++ +  WD
Sbjct: 239 GGSSSPLSELTFGDTEEEIQPPWNENALEKYPSYEID--WD 251

[Close]

BLAST of CmaCh02G009070 vs. TAIR 10
Match: AT4G13620.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 107.5 bits (267), Expect = 1.9e-23
Identity = 77/195 (39.49%), Postives = 97/195 (49.74%), Query Frame = 0


Query: 104 KVYRGVRQRQWGKWVAEIRLPQNRMRVWLGTYDSPETAAYAYDCAACKLRGEYARLNFPN 163
           K+YRGVRQR WGKWVAEIRLP+NR RVWLGT+++ E AA AYD AA  LRGE+A LNFP 
Sbjct: 230 KLYRGVRQRHWGKWVAEIRLPRNRTRVWLGTFETAEQAAMAYDTAAYILRGEFAHLNFP- 289

Query: 164 LKDLKSDLGSDEFVKLSGLKKLVDAKIQAIFQKIKGKGKKKDCRRIGSDLGSGSCSSSSP 223
             DLK  L S     +  +  L+++KIQ I                       S S  S 
Sbjct: 290 --DLKHQLKSGSLRCM--IASLLESKIQQI-----------------------SSSQVSN 349

Query: 224 SVSLPPAVVEMTEKWSWERVSAVGAAEDGLWNFENSPRAGSVDCLTATATGSETEWYSLE 283
           S S PP  V   E+ +       G  ED +   + S +              E +   L 
Sbjct: 350 SPSPPPPKVGTPEQKNHHMKMESG--EDVMMKKQKSHK-----------EVMEGDGVQLS 383

Query: 284 KMPSFDAEQIWDVLA 299
           +MPS D + IWD L+
Sbjct: 410 RMPSLDMDLIWDALS 383

The following BLAST results are available for this feature:

BLAST of CmaCh02G009070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C7W2	2.4e-50	43.29	Ethylene-responsive transcription factor ERF061 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8H1E4	2.6e-28	41.46	Ethylene-responsive transcription factor RAP2-4 OS=Arabidopsis thaliana OX=3702 ...	[more]
O65665	3.8e-24	40.10	Ethylene-responsive transcription factor ERF060 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LM15	1.5e-23	38.46	Ethylene-responsive transcription factor RAP2-13 OS=Arabidopsis thaliana OX=3702...	[more]
Q9SVQ0	2.7e-22	39.49	Ethylene-responsive transcription factor ERF062 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CmaCh02G009070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64380.1	1.7e-51	43.29	Integrase-type DNA-binding superfamily protein	[more]
AT1G78080.1	1.8e-29	41.46	related to AP2 4	[more]
AT4G39780.1	2.7e-25	40.10	Integrase-type DNA-binding superfamily protein	[more]
AT1G22190.1	1.0e-24	38.46	Integrase-type DNA-binding superfamily protein	[more]
AT4G13620.1	1.9e-23	39.49	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 106..117 score: 72.42 coord: 144..164 score: 54.98
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 105..168 e-value: 1.1E-33 score: 127.9
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 105..155 e-value: 3.7E-14 score: 52.7
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 105..162 score: 22.444565
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 106..164 e-value: 1.71464E-19 score: 78.4675
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 105..163 e-value: 1.2E-24 score: 88.2
None	No IPR available	PANTHER	PTHR31657	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061	coord: 9..298
None	No IPR available	PANTHER	PTHR31657:SF20	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061	coord: 9..298
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 105..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G009070.1	CmaCh02G009070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity