CmaCh02G008850 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh02G008850
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	syntaxin-71-like
Location	Cma_Chr02: 5257841 .. 5259962 (+)
RNA-Seq Expression	CmaCh02G008850
Synteny	CmaCh02G008850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCATCTGTTTCTCCTGCATCTTCGAAGCCGCTTTGTACGCTGGACGTCTCAGAGTGCGAGAAGAGAAGGGGTTTGATGGATATGTCCCAAATGAAGAACAAACAATCTTCCGACCATTTCTATCTCCAAATCTCTGCTTTCTTCTTCTTCCTCCAGCCCTTCTTCTTCTTCTGCATCTGCTTGCGACGCCAAAATGACCGTAATCGATGTCATCTTCCGAGTCGATTCCATTTGCAAGAAATACGAGAAGTATGATGTCGAGAAACAGCGCGAGCTCAATGCTTATGGTGATGATGTTTTTGCTCGCCTCTACGCCGCCGTCGAACTCGAAATCGAAGCCGCTCTCCAGGTTTAAGTCCTTTTATTCTCCCCATTGTCTAGTTTTCTTCTTTGATAACCTATCCTTTTGTTTTAATTGAAGATTGATTTGGTTTTAGAAATATGAGAGTGCCTGTACGGAGAAGAATAGGGCTGCTGCAGTTGCGATGAACGCTGAGGTTCGACGGAAGAAGGCCCGATTGATGGATGAAGTTCCCAAGCTTCATAAATTGGCTCGCAAGAAGGTCAAAGTCTTCCCCCTCTTTGTTTTATTTGATACTAGGGATTTCTCTCCTCTCGTTTCGTTTTTTGATCGCCATGGATGTGGTTCAGATTAAAGGGGTTCCGAAAGAAGAACTTGAGGTCAGAGGTGATCTTGTTCTTGCGCTTGAAGAGAGGATTAAAGCGATTCCAGATGGGAGTACGACAGGCAAACCATCTGGAGGATGGGCCTCCACCTCATCTAACAATATTAAGTTTGATTCAACAACAGGTTTGACTCCATTTCAATGAAGCTTGAAATATGTTTGTTCATTTTTGTTGTTTGGCTTTGATTGTTTACGACCCACTTTAGATGGACACTTCGAGAGCGAGTATTTCCAACAAAGCGAAGAATCGAGTCAATTTCGACAGGAGTATGATATGCGGAAGATGAAACAGGCATGTGAGTTTCTTTACTATTTTCTGCATTGGAATTAGTTCTAAGACAGAACGCATAAATTATTAAAGATAAATGGACTGATGCTTTGTCTAGGATTGTTGGTTGGAGTTCACATGGGCTAATTTAGAGGATGATTATGAGTTTATAAATAAAGAATATATCTCTATTGGTATGAGACTTTTTGTGAAACCAGAAACAAATGCTTAGTTTTATCATTTGTGTTTGCTTCATCTTTGTAGGACGAAGGTCTGGATGTCATATCTGAAGGGTTGGATATGCTGAAAAATTTAGCCCATGATATGAATGAGGTCAGTAGGGAAAAACAAACAAGCACACATAAATGGGTGGTTAATAGCTCTGTTTAGGGCCGTCTAATAAGGGTTTTATCCTTGTTTTTAGGAATTGGATAGGCAAGTTCCATTAATTGACGAGATTGACTCAAAGGTATAACTTAGAATTTTGTTTGGTTTGAAACTATTATGCATATGATAAGTATATCCCAGGTAGCTCTTGTTTTTGACGTTGTTATAGGTAGACAAGGTGACCAATGAGATGAAAAACACCAATGTTAGGCTCAAGCAAACGCTTAATGAGGTAATTAATGTTAAAGAAAGCAAGCATTGTGTTAATAAACAGACCCTTTTACTGTGGTTTTGTAATTGAATGAAGGTGAGATCCAGCCAAAACTTCTGCATCGATATCATTCTTCTCTGTATAATTCTTGGAATCGCTTCTTACTTGTACAAGTGAGTTCTCTGATTCTGCAAAATTCTCATTAATGGCTATCAAATTCAAAACATAGCAAATCTGGGCAACGCTTGGCATGTTTTTCTGCAGTATATTGAGCGGAAATGATTGAATTATGGGCTGACCATGAGTTACGAGGTGACATGGAGGCATTATTCATTCATCAACTTCAATACTACATGTCGAGATCTGCAGCCGTGTGCAATTTCTTTATTTCAGTGGCTGGATAAACTGTAAAACATCTCCCATTTTCACTATGGCTGTATCAAGGAAGAAGTCAATTATAAGGATGCATTTTTTATTGTTTTTATTATTTTTCATTTTTTTGTTGCCTTTAGTTTCTGGAGAGCATGAAATTGGAGTTAGAAATATATTTGAGCAACTAAGTTTCTTTC

mRNA sequence

TCCATCTGTTTCTCCTGCATCTTCGAAGCCGCTTTGTACGCTGGACGTCTCAGAGTGCGAGAAGAGAAGGGGTTTGATGGATATGTCCCAAATGAAGAACAAACAATCTTCCGACCATTTCTATCTCCAAATCTCTGCTTTCTTCTTCTTCCTCCAGCCCTTCTTCTTCTTCTGCATCTGCTTGCGACGCCAAAATGACCGTAATCGATGTCATCTTCCGAGTCGATTCCATTTGCAAGAAATACGAGAAGTATGATGTCGAGAAACAGCGCGAGCTCAATGCTTATGGTGATGATGTTTTTGCTCGCCTCTACGCCGCCGTCGAACTCGAAATCGAAGCCGCTCTCCAGAAATATGAGAGTGCCTGTACGGAGAAGAATAGGGCTGCTGCAGTTGCGATGAACGCTGAGGTTCGACGGAAGAAGGCCCGATTGATGGATGAAGTTCCCAAGCTTCATAAATTGGCTCGCAAGAAGATTAAAGGGGTTCCGAAAGAAGAACTTGAGGTCAGAGGTGATCTTGTTCTTGCGCTTGAAGAGAGGATTAAAGCGATTCCAGATGGGAGTACGACAGGCAAACCATCTGGAGGATGGGCCTCCACCTCATCTAACAATATTAAGTTTGATTCAACAACAGATGGACACTTCGAGAGCGAGTATTTCCAACAAAGCGAAGAATCGAGTCAATTTCGACAGGAGTATGATATGCGGAAGATGAAACAGGACGAAGGTCTGGATGTCATATCTGAAGGGTTGGATATGCTGAAAAATTTAGCCCATGATATGAATGAGGAATTGGATAGGCAAGTTCCATTAATTGACGAGATTGACTCAAAGGTAGACAAGGTGACCAATGAGATGAAAAACACCAATGTTAGGCTCAAGCAAACGCTTAATGAGGTGAGATCCAGCCAAAACTTCTGCATCGATATCATTCTTCTCTGTATAATTCTTGGAATCGCTTCTTACTTGTACAATATATTGAGCGGAAATGATTGAATTATGGGCTGACCATGAGTTACGAGGTGACATGGAGGCATTATTCATTCATCAACTTCAATACTACATGTCGAGATCTGCAGCCGTGTGCAATTTCTTTATTTCAGTGGCTGGATAAACTGTAAAACATCTCCCATTTTCACTATGGCTGTATCAAGGAAGAAGTCAATTATAAGGATGCATTTTTTATTGTTTTTATTATTTTTCATTTTTTTGTTGCCTTTAGTTTCTGGAGAGCATGAAATTGGAGTTAGAAATATATTTGAGCAACTAAGTTTCTTTC

Coding sequence (CDS)

ATGACCGTAATCGATGTCATCTTCCGAGTCGATTCCATTTGCAAGAAATACGAGAAGTATGATGTCGAGAAACAGCGCGAGCTCAATGCTTATGGTGATGATGTTTTTGCTCGCCTCTACGCCGCCGTCGAACTCGAAATCGAAGCCGCTCTCCAGAAATATGAGAGTGCCTGTACGGAGAAGAATAGGGCTGCTGCAGTTGCGATGAACGCTGAGGTTCGACGGAAGAAGGCCCGATTGATGGATGAAGTTCCCAAGCTTCATAAATTGGCTCGCAAGAAGATTAAAGGGGTTCCGAAAGAAGAACTTGAGGTCAGAGGTGATCTTGTTCTTGCGCTTGAAGAGAGGATTAAAGCGATTCCAGATGGGAGTACGACAGGCAAACCATCTGGAGGATGGGCCTCCACCTCATCTAACAATATTAAGTTTGATTCAACAACAGATGGACACTTCGAGAGCGAGTATTTCCAACAAAGCGAAGAATCGAGTCAATTTCGACAGGAGTATGATATGCGGAAGATGAAACAGGACGAAGGTCTGGATGTCATATCTGAAGGGTTGGATATGCTGAAAAATTTAGCCCATGATATGAATGAGGAATTGGATAGGCAAGTTCCATTAATTGACGAGATTGACTCAAAGGTAGACAAGGTGACCAATGAGATGAAAAACACCAATGTTAGGCTCAAGCAAACGCTTAATGAGGTGAGATCCAGCCAAAACTTCTGCATCGATATCATTCTTCTCTGTATAATTCTTGGAATCGCTTCTTACTTGTACAATATATTGAGCGGAAATGATTGA

Protein sequence

MTVIDVIFRVDSICKKYEKYDVEKQRELNAYGDDVFARLYAAVELEIEAALQKYESACTEKNRAAAVAMNAEVRRKKARLMDEVPKLHKLARKKIKGVPKEELEVRGDLVLALEERIKAIPDGSTTGKPSGGWASTSSNNIKFDSTTDGHFESEYFQQSEESSQFRQEYDMRKMKQDEGLDVISEGLDMLKNLAHDMNEELDRQVPLIDEIDSKVDKVTNEMKNTNVRLKQTLNEVRSSQNFCIDIILLCIILGIASYLYNILSGND

Homology

[Close]

BLAST of CmaCh02G008850 vs. ExPASy Swiss-Prot
Match: Q9SF29 (Syntaxin-71 OS=Arabidopsis thaliana OX=3702 GN=SYP71 PE=1 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 8.5e-92
Identity = 181/267 (67.79%), Postives = 222/267 (83.15%), Query Frame = 0


Query: 1   MTVIDVIFRVDSICKKYEKYDVEKQRELNAYGDDVFARLYAAVELEIEAALQKYESACTE 60
           MTVID++ RVDSICKKY+KYDV+KQRE N  GDD FARLY A E +IE AL+K E    E
Sbjct: 1   MTVIDILTRVDSICKKYDKYDVDKQREANISGDDAFARLYGAFETQIETALEKAELVTKE 60

Query: 61  KNRAAAVAMNAEVRRKKARLMDEVPKLHKLARKKIKGVPKEELEVRGDLVLALEERIKAI 120
           KNRAAAVAMNAE+RR KARL +EVPKL +LA K++KG+  EEL  R DLVLAL  RI+AI
Sbjct: 61  KNRAAAVAMNAEIRRTKARLSEEVPKLQRLAVKRVKGLTTEELAARNDLVLALPARIEAI 120

Query: 121 PDGSTTG-KPSGGW---ASTSSNNIKFDSTTDGHFESEYFQQSEESSQFRQEYDMRKMKQ 180
           PDG+  G K +  W   ++TS  +IKFDS  DG F+ +YFQ+S ESSQFRQEY+MRK+KQ
Sbjct: 121 PDGTAGGPKSTSAWTPSSTTSRPDIKFDS--DGRFDDDYFQESNESSQFRQEYEMRKIKQ 180

Query: 181 DEGLDVISEGLDMLKNLAHDMNEELDRQVPLIDEIDSKVDKVTNEMKNTNVRLKQTLNEV 240
           ++GLD+ISEGLD LKN+A DMNEELDRQVPL+DEID+KVD+ T+++KNTNVRLK T+N++
Sbjct: 181 EQGLDMISEGLDALKNMASDMNEELDRQVPLMDEIDTKVDRATSDLKNTNVRLKDTVNQL 240

Query: 241 RSSQNFCIDIILLCIILGIASYLYNIL 264
           RSS+NFCIDI+LLCI+LGIA+YLYN+L
Sbjct: 241 RSSRNFCIDIVLLCIVLGIAAYLYNVL 265

[Close]

BLAST of CmaCh02G008850 vs. ExPASy Swiss-Prot
Match: Q94KK6 (Syntaxin-72 OS=Arabidopsis thaliana OX=3702 GN=SYP72 PE=2 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 4.5e-85
Identity = 171/268 (63.81%), Postives = 216/268 (80.60%), Query Frame = 0


Query: 1   MTVIDVIFRVDSICKKYEKYDVEKQRELNAYGDDVFARLYAAVELEIEAALQKYESACTE 60
           M VID+IFRVD ICKKY+KYD++K RE+ A GDD F+RL+ +++ +IEA L+K E A TE
Sbjct: 1   MPVIDIIFRVDEICKKYDKYDIDKHREIGASGDDAFSRLFTSIDSDIEAVLRKAELASTE 60

Query: 61  KNRAAAVAMNAEVRRKKARLMDEVPKLHKLARKKIKGVPKEELEVRGDLVLALEERIKAI 120
           KNRAAAVAMNAEVRR KARL ++V KL KLA KKIKG+ +EE E R DLV+AL +R++AI
Sbjct: 61  KNRAAAVAMNAEVRRTKARLAEDVVKLQKLAVKKIKGLTREERESRCDLVIALADRLQAI 120

Query: 121 PDGSTTGKPSG----GWASTSSNNIKFDSTTDGHFESEYFQQSEESSQFRQEYDMRKMKQ 180
           PDG+  G        G AS  + NIKFD + +   +  +FQQSEESSQFRQEY+MR+ KQ
Sbjct: 121 PDGNEHGAKQANSDWGGASAPNKNIKFDMSEE-DMDDGFFQQSEESSQFRQEYEMRRKKQ 180

Query: 181 DEGLDVISEGLDMLKNLAHDMNEELDRQVPLIDEIDSKVDKVTNEMKNTNVRLKQTLNEV 240
           DEGLD+ISEGLD LKNLA DMNEELD+QVPL++E+++KVD  T+++KNTNVRLK+ L ++
Sbjct: 181 DEGLDIISEGLDALKNLARDMNEELDKQVPLMEEMETKVDGATSDLKNTNVRLKKQLVQM 240

Query: 241 RSSQNFCIDIILLCIILGIASYLYNILS 265
           RSS+NFCIDIILLC+ILGI SY+YN L+
Sbjct: 241 RSSRNFCIDIILLCVILGIVSYIYNALN 267

[Close]

BLAST of CmaCh02G008850 vs. ExPASy Swiss-Prot
Match: Q94KK5 (Syntaxin-73 OS=Arabidopsis thaliana OX=3702 GN=SYP73 PE=2 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 4.1e-78
Identity = 158/263 (60.08%), Postives = 208/263 (79.09%), Query Frame = 0


Query: 1   MTVIDVIFRVDSICKKYEKYDVEKQRELNAYGDDVFARLYAAVELEIEAALQKYESACTE 60
           M VID+I RVDSICKKYEKYD+ +QR+ N  GDD F+RLY+AVE  +E  LQK E   +E
Sbjct: 1   MGVIDLITRVDSICKKYEKYDINRQRDANVSGDDAFSRLYSAVEYALETVLQKTEDLSSE 60

Query: 61  KNRAAAVAMNAEVRRKKARLMDEVPKLHKLARKKIKGVPKEELEVRGDLVLALEERIKAI 120
            N+A AVAMNAE+RR KARL++ +PKL +L+ KK+KG+ KEEL+ R DLVL+L ++I+AI
Sbjct: 61  TNKAKAVAMNAEIRRTKARLLEGIPKLQRLSLKKVKGLSKEELDARNDLVLSLRDKIEAI 120

Query: 121 PDGSTTGKPSGGW-ASTSSNNIKFD-STTDGHFESEYFQQSEESSQFRQEYDMRKMKQDE 180
           P+ S      GGW ASTS +NI+FD + +D    SEYFQ + ES QF+QEY+M+++KQ  
Sbjct: 121 PESS--APVVGGWEASTSYSNIRFDTNVSDDRIGSEYFQPTGESDQFKQEYEMKRIKQAR 180

Query: 181 GLDVISEGLDMLKNLAHDMNEELDRQVPLIDEIDSKVDKVTNEMKNTNVRLKQTLNEVRS 240
            LD I+EGLD LKN+A D+NEELDRQ PL+DEID+K+DK   ++K+TNVRLK T+ ++RS
Sbjct: 181 -LDYIAEGLDTLKNMAQDINEELDRQEPLMDEIDTKIDKAATDLKSTNVRLKDTVTKLRS 240

Query: 241 SQNFCIDIILLCIILGIASYLYN 262
           S+NFCIDIILLCI+LGIA+++YN
Sbjct: 241 SRNFCIDIILLCILLGIAAFIYN 260

[Close]

BLAST of CmaCh02G008850 vs. ExPASy Swiss-Prot
Match: Q54IX6 (Probable syntaxin-8B OS=Dictyostelium discoideum OX=44689 GN=syn8B PE=3 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.3e-04
Identity = 34/108 (31.48%), Postives = 64/108 (59.26%), Query Frame = 0


Query: 152 ESEYFQQSEESSQF-RQEYDMRKMKQDEGLDVISEGLDMLKNLAHDMNEELDRQVPLIDE 211
           E+E  +Q +    F  Q++ MR  +QDE LD++S+ +   KN+AH M+ ELD+   ++D+
Sbjct: 131 ETEATKQFDNQQLFTNQQHIMR--EQDESLDLLSQSIMRQKNMAHAMSNELDQHNEMLDD 190

Query: 212 IDSKVDKVTNEMKNTNVRLKQTLNEVRSS-QNFCIDIILLCIILGIAS 258
           ++   D V+  ++N N R++       S+    CI I+++ I++ IA+
Sbjct: 191 VEIGTDAVSMRLRNANRRMETIKQNAGSTCMIVCIVILIILIVVLIAT 236

[Close]

BLAST of CmaCh02G008850 vs. TAIR 10
Match: AT3G09740.1 (syntaxin of plants 71 )

HSP 1 Score: 338.2 bits (866), Expect = 6.0e-93
Identity = 181/267 (67.79%), Postives = 222/267 (83.15%), Query Frame = 0


Query: 1   MTVIDVIFRVDSICKKYEKYDVEKQRELNAYGDDVFARLYAAVELEIEAALQKYESACTE 60
           MTVID++ RVDSICKKY+KYDV+KQRE N  GDD FARLY A E +IE AL+K E    E
Sbjct: 1   MTVIDILTRVDSICKKYDKYDVDKQREANISGDDAFARLYGAFETQIETALEKAELVTKE 60

Query: 61  KNRAAAVAMNAEVRRKKARLMDEVPKLHKLARKKIKGVPKEELEVRGDLVLALEERIKAI 120
           KNRAAAVAMNAE+RR KARL +EVPKL +LA K++KG+  EEL  R DLVLAL  RI+AI
Sbjct: 61  KNRAAAVAMNAEIRRTKARLSEEVPKLQRLAVKRVKGLTTEELAARNDLVLALPARIEAI 120

Query: 121 PDGSTTG-KPSGGW---ASTSSNNIKFDSTTDGHFESEYFQQSEESSQFRQEYDMRKMKQ 180
           PDG+  G K +  W   ++TS  +IKFDS  DG F+ +YFQ+S ESSQFRQEY+MRK+KQ
Sbjct: 121 PDGTAGGPKSTSAWTPSSTTSRPDIKFDS--DGRFDDDYFQESNESSQFRQEYEMRKIKQ 180

Query: 181 DEGLDVISEGLDMLKNLAHDMNEELDRQVPLIDEIDSKVDKVTNEMKNTNVRLKQTLNEV 240
           ++GLD+ISEGLD LKN+A DMNEELDRQVPL+DEID+KVD+ T+++KNTNVRLK T+N++
Sbjct: 181 EQGLDMISEGLDALKNMASDMNEELDRQVPLMDEIDTKVDRATSDLKNTNVRLKDTVNQL 240

Query: 241 RSSQNFCIDIILLCIILGIASYLYNIL 264
           RSS+NFCIDI+LLCI+LGIA+YLYN+L
Sbjct: 241 RSSRNFCIDIVLLCIVLGIAAYLYNVL 265

[Close]

BLAST of CmaCh02G008850 vs. TAIR 10
Match: AT3G45280.1 (syntaxin of plants 72 )

HSP 1 Score: 315.8 bits (808), Expect = 3.2e-86
Identity = 171/268 (63.81%), Postives = 216/268 (80.60%), Query Frame = 0


Query: 1   MTVIDVIFRVDSICKKYEKYDVEKQRELNAYGDDVFARLYAAVELEIEAALQKYESACTE 60
           M VID+IFRVD ICKKY+KYD++K RE+ A GDD F+RL+ +++ +IEA L+K E A TE
Sbjct: 1   MPVIDIIFRVDEICKKYDKYDIDKHREIGASGDDAFSRLFTSIDSDIEAVLRKAELASTE 60

Query: 61  KNRAAAVAMNAEVRRKKARLMDEVPKLHKLARKKIKGVPKEELEVRGDLVLALEERIKAI 120
           KNRAAAVAMNAEVRR KARL ++V KL KLA KKIKG+ +EE E R DLV+AL +R++AI
Sbjct: 61  KNRAAAVAMNAEVRRTKARLAEDVVKLQKLAVKKIKGLTREERESRCDLVIALADRLQAI 120

Query: 121 PDGSTTGKPSG----GWASTSSNNIKFDSTTDGHFESEYFQQSEESSQFRQEYDMRKMKQ 180
           PDG+  G        G AS  + NIKFD + +   +  +FQQSEESSQFRQEY+MR+ KQ
Sbjct: 121 PDGNEHGAKQANSDWGGASAPNKNIKFDMSEE-DMDDGFFQQSEESSQFRQEYEMRRKKQ 180

Query: 181 DEGLDVISEGLDMLKNLAHDMNEELDRQVPLIDEIDSKVDKVTNEMKNTNVRLKQTLNEV 240
           DEGLD+ISEGLD LKNLA DMNEELD+QVPL++E+++KVD  T+++KNTNVRLK+ L ++
Sbjct: 181 DEGLDIISEGLDALKNLARDMNEELDKQVPLMEEMETKVDGATSDLKNTNVRLKKQLVQM 240

Query: 241 RSSQNFCIDIILLCIILGIASYLYNILS 265
           RSS+NFCIDIILLC+ILGI SY+YN L+
Sbjct: 241 RSSRNFCIDIILLCVILGIVSYIYNALN 267

[Close]

BLAST of CmaCh02G008850 vs. TAIR 10
Match: AT3G61450.2 (syntaxin of plants 73 )

HSP 1 Score: 303.5 bits (776), Expect = 1.7e-82
Identity = 160/263 (60.84%), Postives = 211/263 (80.23%), Query Frame = 0


Query: 1   MTVIDVIFRVDSICKKYEKYDVEKQRELNAYGDDVFARLYAAVELEIEAALQKYESACTE 60
           M VID+I RVDSICKKYEKYD+ +QR+ N  GDD F+RLY+AVE  +E  LQK E   +E
Sbjct: 1   MGVIDLITRVDSICKKYEKYDINRQRDANVSGDDAFSRLYSAVEYALETVLQKTEDLSSE 60

Query: 61  KNRAAAVAMNAEVRRKKARLMDEVPKLHKLARKKIKGVPKEELEVRGDLVLALEERIKAI 120
            N+A AVAMNAE+RR KARL++ +PKL +L+ KK+KG+ KEEL+ R DLVL+L ++I+AI
Sbjct: 61  TNKAKAVAMNAEIRRTKARLLEGIPKLQRLSLKKVKGLSKEELDARNDLVLSLRDKIEAI 120

Query: 121 PDGSTTGKPSGGW-ASTSSNNIKFD-STTDGHFESEYFQQSEESSQFRQEYDMRKMKQDE 180
           P+ S      GGW ASTS +NI+FD + +D    SEYFQ + ES QF+QEY+M+++KQD+
Sbjct: 121 PESS--APVVGGWEASTSYSNIRFDTNVSDDRIGSEYFQPTGESDQFKQEYEMKRIKQDQ 180

Query: 181 GLDVISEGLDMLKNLAHDMNEELDRQVPLIDEIDSKVDKVTNEMKNTNVRLKQTLNEVRS 240
           GLD I+EGLD LKN+A D+NEELDRQ PL+DEID+K+DK   ++K+TNVRLK T+ ++RS
Sbjct: 181 GLDYIAEGLDTLKNMAQDINEELDRQEPLMDEIDTKIDKAATDLKSTNVRLKDTVTKLRS 240

Query: 241 SQNFCIDIILLCIILGIASYLYN 262
           S+NFCIDIILLCI+LGIA+++YN
Sbjct: 241 SRNFCIDIILLCILLGIAAFIYN 261

[Close]

BLAST of CmaCh02G008850 vs. TAIR 10
Match: AT3G61450.1 (syntaxin of plants 73 )

HSP 1 Score: 292.7 bits (748), Expect = 2.9e-79
Identity = 158/263 (60.08%), Postives = 208/263 (79.09%), Query Frame = 0


Query: 1   MTVIDVIFRVDSICKKYEKYDVEKQRELNAYGDDVFARLYAAVELEIEAALQKYESACTE 60
           M VID+I RVDSICKKYEKYD+ +QR+ N  GDD F+RLY+AVE  +E  LQK E   +E
Sbjct: 1   MGVIDLITRVDSICKKYEKYDINRQRDANVSGDDAFSRLYSAVEYALETVLQKTEDLSSE 60

Query: 61  KNRAAAVAMNAEVRRKKARLMDEVPKLHKLARKKIKGVPKEELEVRGDLVLALEERIKAI 120
            N+A AVAMNAE+RR KARL++ +PKL +L+ KK+KG+ KEEL+ R DLVL+L ++I+AI
Sbjct: 61  TNKAKAVAMNAEIRRTKARLLEGIPKLQRLSLKKVKGLSKEELDARNDLVLSLRDKIEAI 120

Query: 121 PDGSTTGKPSGGW-ASTSSNNIKFD-STTDGHFESEYFQQSEESSQFRQEYDMRKMKQDE 180
           P+ S      GGW ASTS +NI+FD + +D    SEYFQ + ES QF+QEY+M+++KQ  
Sbjct: 121 PESS--APVVGGWEASTSYSNIRFDTNVSDDRIGSEYFQPTGESDQFKQEYEMKRIKQAR 180

Query: 181 GLDVISEGLDMLKNLAHDMNEELDRQVPLIDEIDSKVDKVTNEMKNTNVRLKQTLNEVRS 240
            LD I+EGLD LKN+A D+NEELDRQ PL+DEID+K+DK   ++K+TNVRLK T+ ++RS
Sbjct: 181 -LDYIAEGLDTLKNMAQDINEELDRQEPLMDEIDTKIDKAATDLKSTNVRLKDTVTKLRS 240

Query: 241 SQNFCIDIILLCIILGIASYLYN 262
           S+NFCIDIILLCI+LGIA+++YN
Sbjct: 241 SRNFCIDIILLCILLGIAAFIYN 260

[Close]

BLAST of CmaCh02G008850 vs. TAIR 10
Match: AT1G13890.1 (soluble N-ethylmaleimide-sensitive factor adaptor protein 30 )

HSP 1 Score: 44.7 bits (104), Expect = 1.4e-04
Identity = 23/69 (33.33%), Postives = 42/69 (60.87%), Query Frame = 0


Query: 167 QEYDMRKMKQDEGLDVISEGLDMLKNLAHDMNEELDRQVPLIDEIDSKVDKVTNEMKNTN 226
           Q+ +  K KQD+GL  +S+ L  LK++A DM  E+D+Q   +D +   VD++ + ++  N
Sbjct: 195 QKVEQEKAKQDDGLSDLSDILGDLKSMAVDMGSEIDKQNKALDHLGDDVDELNSRVQGAN 254

Query: 227 VRLKQTLNE 236
            R +  L++
Sbjct: 255 QRARHLLSK 263

The following BLAST results are available for this feature:

BLAST of CmaCh02G008850 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SF29	8.5e-92	67.79	Syntaxin-71 OS=Arabidopsis thaliana OX=3702 GN=SYP71 PE=1 SV=1	[more]
Q94KK6	4.5e-85	63.81	Syntaxin-72 OS=Arabidopsis thaliana OX=3702 GN=SYP72 PE=2 SV=1	[more]
Q94KK5	4.1e-78	60.08	Syntaxin-73 OS=Arabidopsis thaliana OX=3702 GN=SYP73 PE=2 SV=1	[more]
Q54IX6	2.3e-04	31.48	Probable syntaxin-8B OS=Dictyostelium discoideum OX=44689 GN=syn8B PE=3 SV=1	[more]

BLAST of CmaCh02G008850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09740.1	6.0e-93	67.79	syntaxin of plants 71	[more]
AT3G45280.1	3.2e-86	63.81	syntaxin of plants 72	[more]
AT3G61450.2	1.7e-82	60.84	syntaxin of plants 73	[more]
AT3G61450.1	2.9e-79	60.08	syntaxin of plants 73	[more]
AT1G13890.1	1.4e-04	33.33	soluble N-ethylmaleimide-sensitive factor adaptor protein 30	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 208..235
None	No IPR available	GENE3D	1.20.5.110		coord: 170..231 e-value: 5.3E-17 score: 63.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..141
None	No IPR available	PANTHER	PTHR19957	SYNTAXIN	coord: 1..261
None	No IPR available	PANTHER	PTHR19957:SF264	SYNTAXIN-73	coord: 1..261
None	No IPR available	CDD	cd15841	SNARE_Qc	coord: 175..231 e-value: 1.22117E-16 score: 70.28
None	No IPR available	SUPERFAMILY	58038	SNARE fusion complex	coord: 163..230
IPR000727	Target SNARE coiled-coil homology domain	SMART	SM00397	tSNARE_6	coord: 165..232 e-value: 4.3E-4 score: 29.6
IPR000727	Target SNARE coiled-coil homology domain	PFAM	PF05739	SNARE	coord: 207..256 e-value: 5.2E-10 score: 39.2
IPR000727	Target SNARE coiled-coil homology domain	PROSITE	PS50192	T_SNARE	coord: 170..232 score: 14.910321
IPR006012	Syntaxin/epimorphin, conserved site	PROSITE	PS00914	SYNTAXIN	coord: 176..215

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G008850.1	CmaCh02G008850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0061025	membrane fusion
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0005484	SNAP receptor activity