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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGGAGAGGATTTGCTAACGAGTTTGTCTATGGAAAATCATCACCCATCTACACTATTGTCAATGGATTCAAGTTCTATGTCTCATGAAGAACTTGAGCGAGAGTTGAATCGACCTGTTGTTCTTTCCCGACCGCCCGATATCAATCTTCCGCTTTCAGCTGAGCGCAGTCCTCCTCCACAGCCCTGGAATTCAGACCCTTTTGACATGTTGGATGTTAGTCTTGGAACCCAAATTAATGAAACTGATGCTCTTCTTAATCTGCCTAAGACTGGACGTAAGTTCTCAAAGAGACTAGACAGTGTGTGGGGTGCCTGGTTTTTCTTTACTTATTATTTTAAGCCAGTGTTGAATGAGAAATCGAAGTGCAAAATCGTTCGGGACAGTAATGGGGTTTCTGGGTTTGACAAGTCTGATCTAGACCTTGAGTGGTTCATGGTTCAACATGATATGGAGAATATATATATGTGGGTTTTTAAGGAAAGGCCAGAGAATGCACTCGGTAAAATGCAGCTCAGGAGTTATATGAATGGACACTCTCGGCAAGGTGAACGCACTTTCCCTTATAGCGTTGACAGGGGGTTTGTTCGGTCTCATAAGATGCAGCGAAAGCATTACAGGGGCTTATCGAATCCTCAATGTGTGCATGGCATCGATTTACTTCCATCGCCTAACCTCATAGGTCTTGACGAGGAGGAGCAGAAAAGGTGGATAGAACTTACAGGGAGGGATCTTAACTTCTCTATCCCACCAGAAGCAAGTGAGTTTTGTTCGTGGAGGAACCTTCCCAGCACAGAATTTGAGCTGGAAAGACCCCTTCCTCCCTTGAAGACCAACTCGCATCCTCCTCCGAGAAAATTGTTAAATGGGGCTAGTCTTAACCTGTCAACCCGACCAACGAACCATGTAAATGGCGGAGGGATGGATCTGTCACCAAAAGGCAACAAGCGGAAGAAGGATTTGTTTCTTCATGGGAATGATGAAGACTGTTGTTTGCTCATTAGCCAACATAATGAGAGAGTTCAGGATATAGAAATCCATCCAGTTGAACCTCCATGGTTAAATGATTTCAGTGGGGCAATGAGGAACGTTTACGGTCCTGTTACAGCTGCAAAAACGATCTACGAGGACGAGCAAGGATACTTAATAATCGTCAGCTTGCCTTTAGCTGATCTAAAACGAGTTAAAGTGACTTGGTGGAACAACCTCACTCATGGGGTTGTAAAGATAACATCAGTGAGCACAGGATGCATGCCCTTTGTGAAAAGAAACGACAGAACATTCAAGCTCACCGATCCATCACCCGAGCACTGCCCTCCAGGAGAGTTCATAAGGGAAATTCCGTTACCAACCAGGATCCCAGACGATGCAAAGCTAGAAGCATATGGAGATGAGACAGGTACTGGTCTAGAGATAATGGTGCCTAAACATCGCGTTGGTCCAGAAGAACATGAAGTTCGTGTTTGCCTTCGCCCTCATCTCGGAGCAAACGAGCTGGTGTTATCTTGA mRNA sequence ATGGGAGAGGATTTGCTAACGAGTTTGTCTATGGAAAATCATCACCCATCTACACTATTGTCAATGGATTCAAGTTCTATGTCTCATGAAGAACTTGAGCGAGAGTTGAATCGACCTGTTGTTCTTTCCCGACCGCCCGATATCAATCTTCCGCTTTCAGCTGAGCGCAGTCCTCCTCCACAGCCCTGGAATTCAGACCCTTTTGACATGTTGGATGTTAGTCTTGGAACCCAAATTAATGAAACTGATGCTCTTCTTAATCTGCCTAAGACTGGACGTAAGTTCTCAAAGAGACTAGACAGTGTGTGGGGTGCCTGGTTTTTCTTTACTTATTATTTTAAGCCAGTGTTGAATGAGAAATCGAAGTGCAAAATCGTTCGGGACAGTAATGGGGTTTCTGGGTTTGACAAGTCTGATCTAGACCTTGAGTGGTTCATGGTTCAACATGATATGGAGAATATATATATGTGGGTTTTTAAGGAAAGGCCAGAGAATGCACTCGGTAAAATGCAGCTCAGGAGTTATATGAATGGACACTCTCGGCAAGGTGAACGCACTTTCCCTTATAGCGTTGACAGGGGGTTTGTTCGGTCTCATAAGATGCAGCGAAAGCATTACAGGGGCTTATCGAATCCTCAATGTGTGCATGGCATCGATTTACTTCCATCGCCTAACCTCATAGGTCTTGACGAGGAGGAGCAGAAAAGGTGGATAGAACTTACAGGGAGGGATCTTAACTTCTCTATCCCACCAGAAGCAAGTGAGTTTTGTTCGTGGAGGAACCTTCCCAGCACAGAATTTGAGCTGGAAAGACCCCTTCCTCCCTTGAAGACCAACTCGCATCCTCCTCCGAGAAAATTGTTAAATGGGGCTAGTCTTAACCTGTCAACCCGACCAACGAACCATGTAAATGGCGGAGGGATGGATCTGTCACCAAAAGGCAACAAGCGGAAGAAGGATTTGTTTCTTCATGGGAATGATGAAGACTGTTGTTTGCTCATTAGCCAACATAATGAGAGAGTTCAGGATATAGAAATCCATCCAGTTGAACCTCCATGGTTAAATGATTTCAGTGGGGCAATGAGGAACGTTTACGGTCCTGTTACAGCTGCAAAAACGATCTACGAGGACGAGCAAGGATACTTAATAATCGTCAGCTTGCCTTTAGCTGATCTAAAACGAGTTAAAGTGACTTGGTGGAACAACCTCACTCATGGGGTTGTAAAGATAACATCAGTGAGCACAGGATGCATGCCCTTTGTGAAAAGAAACGACAGAACATTCAAGCTCACCGATCCATCACCCGAGCACTGCCCTCCAGGAGAGTTCATAAGGGAAATTCCGTTACCAACCAGGATCCCAGACGATGCAAAGCTAGAAGCATATGGAGATGAGACAGGTACTGGTCTAGAGATAATGGTGCCTAAACATCGCGTTGGTCCAGAAGAACATGAAGTTCGTGTTTGCCTTCGCCCTCATCTCGGAGCAAACGAGCTGGTGTTATCTTGA Coding sequence (CDS) ATGGGAGAGGATTTGCTAACGAGTTTGTCTATGGAAAATCATCACCCATCTACACTATTGTCAATGGATTCAAGTTCTATGTCTCATGAAGAACTTGAGCGAGAGTTGAATCGACCTGTTGTTCTTTCCCGACCGCCCGATATCAATCTTCCGCTTTCAGCTGAGCGCAGTCCTCCTCCACAGCCCTGGAATTCAGACCCTTTTGACATGTTGGATGTTAGTCTTGGAACCCAAATTAATGAAACTGATGCTCTTCTTAATCTGCCTAAGACTGGACGTAAGTTCTCAAAGAGACTAGACAGTGTGTGGGGTGCCTGGTTTTTCTTTACTTATTATTTTAAGCCAGTGTTGAATGAGAAATCGAAGTGCAAAATCGTTCGGGACAGTAATGGGGTTTCTGGGTTTGACAAGTCTGATCTAGACCTTGAGTGGTTCATGGTTCAACATGATATGGAGAATATATATATGTGGGTTTTTAAGGAAAGGCCAGAGAATGCACTCGGTAAAATGCAGCTCAGGAGTTATATGAATGGACACTCTCGGCAAGGTGAACGCACTTTCCCTTATAGCGTTGACAGGGGGTTTGTTCGGTCTCATAAGATGCAGCGAAAGCATTACAGGGGCTTATCGAATCCTCAATGTGTGCATGGCATCGATTTACTTCCATCGCCTAACCTCATAGGTCTTGACGAGGAGGAGCAGAAAAGGTGGATAGAACTTACAGGGAGGGATCTTAACTTCTCTATCCCACCAGAAGCAAGTGAGTTTTGTTCGTGGAGGAACCTTCCCAGCACAGAATTTGAGCTGGAAAGACCCCTTCCTCCCTTGAAGACCAACTCGCATCCTCCTCCGAGAAAATTGTTAAATGGGGCTAGTCTTAACCTGTCAACCCGACCAACGAACCATGTAAATGGCGGAGGGATGGATCTGTCACCAAAAGGCAACAAGCGGAAGAAGGATTTGTTTCTTCATGGGAATGATGAAGACTGTTGTTTGCTCATTAGCCAACATAATGAGAGAGTTCAGGATATAGAAATCCATCCAGTTGAACCTCCATGGTTAAATGATTTCAGTGGGGCAATGAGGAACGTTTACGGTCCTGTTACAGCTGCAAAAACGATCTACGAGGACGAGCAAGGATACTTAATAATCGTCAGCTTGCCTTTAGCTGATCTAAAACGAGTTAAAGTGACTTGGTGGAACAACCTCACTCATGGGGTTGTAAAGATAACATCAGTGAGCACAGGATGCATGCCCTTTGTGAAAAGAAACGACAGAACATTCAAGCTCACCGATCCATCACCCGAGCACTGCCCTCCAGGAGAGTTCATAAGGGAAATTCCGTTACCAACCAGGATCCCAGACGATGCAAAGCTAGAAGCATATGGAGATGAGACAGGTACTGGTCTAGAGATAATGGTGCCTAAACATCGCGTTGGTCCAGAAGAACATGAAGTTCGTGTTTGCCTTCGCCCTCATCTCGGAGCAAACGAGCTGGTGTTATCTTGA Protein sequence MGEDLLTSLSMENHHPSTLLSMDSSSMSHEELERELNRPVVLSRPPDINLPLSAERSPPPQPWNSDPFDMLDVSLGTQINETDALLNLPKTGRKFSKRLDSVWGAWFFFTYYFKPVLNEKSKCKIVRDSNGVSGFDKSDLDLEWFMVQHDMENIYMWVFKERPENALGKMQLRSYMNGHSRQGERTFPYSVDRGFVRSHKMQRKHYRGLSNPQCVHGIDLLPSPNLIGLDEEEQKRWIELTGRDLNFSIPPEASEFCSWRNLPSTEFELERPLPPLKTNSHPPPRKLLNGASLNLSTRPTNHVNGGGMDLSPKGNKRKKDLFLHGNDEDCCLLISQHNERVQDIEIHPVEPPWLNDFSGAMRNVYGPVTAAKTIYEDEQGYLIIVSLPLADLKRVKVTWWNNLTHGVVKITSVSTGCMPFVKRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPDDAKLEAYGDETGTGLEIMVPKHRVGPEEHEVRVCLRPHLGANELVLS
Homology
BLAST of CmaCh02G008140 vs. TAIR 10
Match: AT2G37570.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 728.0 bits (1878), Expect = 5.1e-210 Identity = 347/497 (69.82%), Postives = 417/497 (83.90%), Query Frame = 0
Query: 11 MENHHPSTLLSMDSSSMSHEELEREL--NRPVVLSRPPDINLPLSAERSPPPQPWNSDPF 70
MENHHPSTLLSMDSS+ SHEEL+ E+ NR +LS PPDINLPLSAERSPPP PWN D
Sbjct: 1 MENHHPSTLLSMDSSASSHEELDLEMNNNRQSLLSGPPDINLPLSAERSPPPPPWNLDAC 60
Query: 71 DMLDVSLGTQINETDALLN-LPKTGRKFSKRLDSVWGAWFFFTYYFKPVLNEKSKCKIVR 130
D+LDV LG+Q ET+ ++ +PK GRK +KR+DS+WGAWFFF++YFKP LNEKSK KIVR
Sbjct: 61 DILDVGLGSQAYETENYMSVVPKVGRKCAKRVDSIWGAWFFFSFYFKPALNEKSKAKIVR 120
Query: 131 DSNGVSGFDKSDLDLEWFMVQHDMENIYMWVFKERPENALGKMQLRSYMNGHSRQGERTF 190
DSNG+SGFDKSDL L+ F+VQHDMEN+YMWVFKERPENALGKMQLRSYMNGHSRQG+R F
Sbjct: 121 DSNGISGFDKSDLKLDVFLVQHDMENMYMWVFKERPENALGKMQLRSYMNGHSRQGDRLF 180
Query: 191 PYSVDRGFVRSHKMQRKHYRGLSNPQCVHGIDLLPSPNLIGLDEEEQKRWIELTGRDLNF 250
P+SV++GFVRSH+MQRKHYRGLSNPQCVHGI+L+P PNL LDEEE+KRW+ELTGRDLNF
Sbjct: 181 PFSVEKGFVRSHRMQRKHYRGLSNPQCVHGIELVPLPNLTCLDEEERKRWMELTGRDLNF 240
Query: 251 SIPPEASEFCSWRNLPSTEFELERPLPPLKTNSHPPPRKLLNGASLNLSTRPTNHVNGGG 310
+IPPEAS+F SWRNLP+T+FELERP P LK + +KLLNG+ LNLST+P+NH NG
Sbjct: 241 TIPPEASDFGSWRNLPNTDFELERPTPSLKNPTANHSKKLLNGSGLNLSTQPSNHSNGEA 300
Query: 311 MDLSPKGNKRKKDLFLHG-NDEDCCLLISQHNERVQDIEIHPVE-PPWLNDFSGAMRNVY 370
DLSP +K++KDLF +G ++E+CCL + N + IE H E P W N+F+GAM+NVY
Sbjct: 301 TDLSPSSHKKRKDLFSNGIHEEECCLTV---NPQPPVIEAHQNELPTWSNEFTGAMKNVY 360
Query: 371 GPVTAAKTIYEDEQGYLIIVSLPLADLKRVKVTWWNNLTHGVVKITSVSTGCMPFVKRND 430
GPVTAAKTIYEDE+GYLII+SLP DL VKV+W N LTHG++K++ +ST +PF+KR+D
Sbjct: 361 GPVTAAKTIYEDEEGYLIIISLPFVDLNSVKVSWRNTLTHGIIKVSCLSTSRVPFIKRHD 420
Query: 431 RTFKLTDPSPEHCPPGEFIREIPLPTRIPDDAKLEAYGDETGTGLEIMVPKHRVGPEEHE 490
RTFKLTD + EHCPPGEF+REIPL RIP+DA +EAY D G+ LEI+VPK R GPEEHE
Sbjct: 421 RTFKLTDSASEHCPPGEFVREIPLSNRIPEDANIEAYYDGPGSVLEILVPKLRAGPEEHE 480
Query: 491 VRVCLRPHLGANELVLS 503
VRVCLRP+LG N+L+L+
Sbjct: 481 VRVCLRPNLGGNDLMLT 494
BLAST of CmaCh02G008140 vs. TAIR 10
Match: AT3G12570.1 (FYD ) HSP 1 Score: 680.2 bits (1754), Expect = 1.2e-195 Identity = 323/492 (65.65%), Postives = 396/492 (80.49%), Query Frame = 0
Query: 1 MGEDLLTSLSMENHHPSTLLSMDSSSMSHEELERELNRPVVLSRPPDINLPLSAERSPPP 60
MGE L+T+LSMEN+HPSTLLSMDS + +HEE ER++N ++L+ PPDINLPLS+E P
Sbjct: 1 MGETLITTLSMENYHPSTLLSMDSGAFTHEESERDMNGSLILTGPPDINLPLSSEARPSL 60
Query: 61 QPWNSDPFDMLDVSLGTQINETDALLNLPKTGRKFSKRLDSVWGAWFFFTYYFKPVLNEK 120
WN + D+LDV LG Q+ E +A++++PK +K++KR+DS WGAW FF++YFKPVL+EK
Sbjct: 61 LLWN-EHCDILDVGLGPQLYEPEAVVHVPKVAKKYNKRVDSAWGAWLFFSFYFKPVLDEK 120
Query: 121 SKCKIVRDSNGVSGFDKSDLDLEWFMVQHDMENIYMWVFKERPENALGKMQLRSYMNGHS 180
SK K+ RDSNG+SG+DKSDL L+ F+VQHDMEN+YMWVFKE+PENALGKMQLRSYMNGHS
Sbjct: 121 SKSKLTRDSNGLSGYDKSDLQLDSFLVQHDMENMYMWVFKEKPENALGKMQLRSYMNGHS 180
Query: 181 RQGERTFPYSVDRGFVRSHKMQRKHYRGLSNPQCVHGIDLLPSPNLIGLDEEEQKRWIEL 240
R+GER FP+SVD+GFVRSH+MQRKHYRGLSNPQC+HGI+++ SPNL L E+E+K+W EL
Sbjct: 181 REGERPFPFSVDKGFVRSHRMQRKHYRGLSNPQCLHGIEVVYSPNLSVLSEDEKKKWTEL 240
Query: 241 TGRDLNFSIPPEASEFCSWRNLPSTEFELERPLPPLKTNSHPPPRKLLNGASLNLSTRPT 300
TGRD+NF+IP EAS++ SWRNLP+TEFE ERPLP K N H +K LNG LNLST
Sbjct: 241 TGRDVNFAIPAEASDYGSWRNLPNTEFEAERPLPLAKANGHTHLKK-LNGTCLNLSTHSP 300
Query: 301 NHVNGGGMDLSPKGNKRKKDLFLHGNDEDCCLLISQHNERVQDIEIHPVEPPWLNDFSGA 360
+H NKRK+D GN +D S +E+ D++IH E PW NDFSG
Sbjct: 301 DHAVDTVEVQLAGSNKRKRDCLALGNCDD-----SSSSEKSLDMKIHATELPWSNDFSGV 360
Query: 361 MRNVYGPVTAAKTIYEDEQGYLIIVSLPLADLKRVKVTWWNNLTHGVVKITSVSTGCMPF 420
M+NVYGPVTAAKTIYED++G+LI++SLP D RVKVTW N HG+VKI+ VST C PF
Sbjct: 361 MKNVYGPVTAAKTIYEDDRGFLIVMSLPFVDSGRVKVTWRNTPAHGIVKISCVSTACEPF 420
Query: 421 VKRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPDDAKLEAYGDETGTGLEIMVPKHRVG 480
+KR+DRTFKLTDP+PEHCPPGEF+RE+ LP RIPDDAKLEAY DETGT LE++VPKHR+G
Sbjct: 421 IKRHDRTFKLTDPTPEHCPPGEFVREVSLPNRIPDDAKLEAYRDETGTTLEVLVPKHRMG 480
Query: 481 PEEHEVRVCLRP 493
PEEHEVRVCLRP
Sbjct: 481 PEEHEVRVCLRP 485
BLAST of CmaCh02G008140 vs. TAIR 10
Match: AT3G12570.3 (FYD ) HSP 1 Score: 680.2 bits (1754), Expect = 1.2e-195 Identity = 323/492 (65.65%), Postives = 396/492 (80.49%), Query Frame = 0
Query: 1 MGEDLLTSLSMENHHPSTLLSMDSSSMSHEELERELNRPVVLSRPPDINLPLSAERSPPP 60
MGE L+T+LSMEN+HPSTLLSMDS + +HEE ER++N ++L+ PPDINLPLS+E P
Sbjct: 1 MGETLITTLSMENYHPSTLLSMDSGAFTHEESERDMNGSLILTGPPDINLPLSSEARPSL 60
Query: 61 QPWNSDPFDMLDVSLGTQINETDALLNLPKTGRKFSKRLDSVWGAWFFFTYYFKPVLNEK 120
WN + D+LDV LG Q+ E +A++++PK +K++KR+DS WGAW FF++YFKPVL+EK
Sbjct: 61 LLWN-EHCDILDVGLGPQLYEPEAVVHVPKVAKKYNKRVDSAWGAWLFFSFYFKPVLDEK 120
Query: 121 SKCKIVRDSNGVSGFDKSDLDLEWFMVQHDMENIYMWVFKERPENALGKMQLRSYMNGHS 180
SK K+ RDSNG+SG+DKSDL L+ F+VQHDMEN+YMWVFKE+PENALGKMQLRSYMNGHS
Sbjct: 121 SKSKLTRDSNGLSGYDKSDLQLDSFLVQHDMENMYMWVFKEKPENALGKMQLRSYMNGHS 180
Query: 181 RQGERTFPYSVDRGFVRSHKMQRKHYRGLSNPQCVHGIDLLPSPNLIGLDEEEQKRWIEL 240
R+GER FP+SVD+GFVRSH+MQRKHYRGLSNPQC+HGI+++ SPNL L E+E+K+W EL
Sbjct: 181 REGERPFPFSVDKGFVRSHRMQRKHYRGLSNPQCLHGIEVVYSPNLSVLSEDEKKKWTEL 240
Query: 241 TGRDLNFSIPPEASEFCSWRNLPSTEFELERPLPPLKTNSHPPPRKLLNGASLNLSTRPT 300
TGRD+NF+IP EAS++ SWRNLP+TEFE ERPLP K N H +K LNG LNLST
Sbjct: 241 TGRDVNFAIPAEASDYGSWRNLPNTEFEAERPLPLAKANGHTHLKK-LNGTCLNLSTHSP 300
Query: 301 NHVNGGGMDLSPKGNKRKKDLFLHGNDEDCCLLISQHNERVQDIEIHPVEPPWLNDFSGA 360
+H NKRK+D GN +D S +E+ D++IH E PW NDFSG
Sbjct: 301 DHAVDTVEVQLAGSNKRKRDCLALGNCDD-----SSSSEKSLDMKIHATELPWSNDFSGV 360
Query: 361 MRNVYGPVTAAKTIYEDEQGYLIIVSLPLADLKRVKVTWWNNLTHGVVKITSVSTGCMPF 420
M+NVYGPVTAAKTIYED++G+LI++SLP D RVKVTW N HG+VKI+ VST C PF
Sbjct: 361 MKNVYGPVTAAKTIYEDDRGFLIVMSLPFVDSGRVKVTWRNTPAHGIVKISCVSTACEPF 420
Query: 421 VKRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPDDAKLEAYGDETGTGLEIMVPKHRVG 480
+KR+DRTFKLTDP+PEHCPPGEF+RE+ LP RIPDDAKLEAY DETGT LE++VPKHR+G
Sbjct: 421 IKRHDRTFKLTDPTPEHCPPGEFVREVSLPNRIPDDAKLEAYRDETGTTLEVLVPKHRMG 480
Query: 481 PEEHEVRVCLRP 493
PEEHEVRVCLRP
Sbjct: 481 PEEHEVRVCLRP 485
BLAST of CmaCh02G008140 vs. TAIR 10
Match: AT3G12570.2 (FYD ) HSP 1 Score: 680.2 bits (1754), Expect = 1.2e-195 Identity = 323/492 (65.65%), Postives = 396/492 (80.49%), Query Frame = 0
Query: 1 MGEDLLTSLSMENHHPSTLLSMDSSSMSHEELERELNRPVVLSRPPDINLPLSAERSPPP 60
MGE L+T+LSMEN+HPSTLLSMDS + +HEE ER++N ++L+ PPDINLPLS+E P
Sbjct: 1 MGETLITTLSMENYHPSTLLSMDSGAFTHEESERDMNGSLILTGPPDINLPLSSEARPSL 60
Query: 61 QPWNSDPFDMLDVSLGTQINETDALLNLPKTGRKFSKRLDSVWGAWFFFTYYFKPVLNEK 120
WN + D+LDV LG Q+ E +A++++PK +K++KR+DS WGAW FF++YFKPVL+EK
Sbjct: 61 LLWN-EHCDILDVGLGPQLYEPEAVVHVPKVAKKYNKRVDSAWGAWLFFSFYFKPVLDEK 120
Query: 121 SKCKIVRDSNGVSGFDKSDLDLEWFMVQHDMENIYMWVFKERPENALGKMQLRSYMNGHS 180
SK K+ RDSNG+SG+DKSDL L+ F+VQHDMEN+YMWVFKE+PENALGKMQLRSYMNGHS
Sbjct: 121 SKSKLTRDSNGLSGYDKSDLQLDSFLVQHDMENMYMWVFKEKPENALGKMQLRSYMNGHS 180
Query: 181 RQGERTFPYSVDRGFVRSHKMQRKHYRGLSNPQCVHGIDLLPSPNLIGLDEEEQKRWIEL 240
R+GER FP+SVD+GFVRSH+MQRKHYRGLSNPQC+HGI+++ SPNL L E+E+K+W EL
Sbjct: 181 REGERPFPFSVDKGFVRSHRMQRKHYRGLSNPQCLHGIEVVYSPNLSVLSEDEKKKWTEL 240
Query: 241 TGRDLNFSIPPEASEFCSWRNLPSTEFELERPLPPLKTNSHPPPRKLLNGASLNLSTRPT 300
TGRD+NF+IP EAS++ SWRNLP+TEFE ERPLP K N H +K LNG LNLST
Sbjct: 241 TGRDVNFAIPAEASDYGSWRNLPNTEFEAERPLPLAKANGHTHLKK-LNGTCLNLSTHSP 300
Query: 301 NHVNGGGMDLSPKGNKRKKDLFLHGNDEDCCLLISQHNERVQDIEIHPVEPPWLNDFSGA 360
+H NKRK+D GN +D S +E+ D++IH E PW NDFSG
Sbjct: 301 DHAVDTVEVQLAGSNKRKRDCLALGNCDD-----SSSSEKSLDMKIHATELPWSNDFSGV 360
Query: 361 MRNVYGPVTAAKTIYEDEQGYLIIVSLPLADLKRVKVTWWNNLTHGVVKITSVSTGCMPF 420
M+NVYGPVTAAKTIYED++G+LI++SLP D RVKVTW N HG+VKI+ VST C PF
Sbjct: 361 MKNVYGPVTAAKTIYEDDRGFLIVMSLPFVDSGRVKVTWRNTPAHGIVKISCVSTACEPF 420
Query: 421 VKRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPDDAKLEAYGDETGTGLEIMVPKHRVG 480
+KR+DRTFKLTDP+PEHCPPGEF+RE+ LP RIPDDAKLEAY DETGT LE++VPKHR+G
Sbjct: 421 IKRHDRTFKLTDPTPEHCPPGEFVREVSLPNRIPDDAKLEAYRDETGTTLEVLVPKHRMG 480
Query: 481 PEEHEVRVCLRP 493
PEEHEVRVCLRP
Sbjct: 481 PEEHEVRVCLRP 485
BLAST of CmaCh02G008140 vs. TAIR 10
Match: AT3G12570.4 (FYD ) HSP 1 Score: 680.2 bits (1754), Expect = 1.2e-195 Identity = 323/492 (65.65%), Postives = 396/492 (80.49%), Query Frame = 0
Query: 1 MGEDLLTSLSMENHHPSTLLSMDSSSMSHEELERELNRPVVLSRPPDINLPLSAERSPPP 60
MGE L+T+LSMEN+HPSTLLSMDS + +HEE ER++N ++L+ PPDINLPLS+E P
Sbjct: 1 MGETLITTLSMENYHPSTLLSMDSGAFTHEESERDMNGSLILTGPPDINLPLSSEARPSL 60
Query: 61 QPWNSDPFDMLDVSLGTQINETDALLNLPKTGRKFSKRLDSVWGAWFFFTYYFKPVLNEK 120
WN + D+LDV LG Q+ E +A++++PK +K++KR+DS WGAW FF++YFKPVL+EK
Sbjct: 61 LLWN-EHCDILDVGLGPQLYEPEAVVHVPKVAKKYNKRVDSAWGAWLFFSFYFKPVLDEK 120
Query: 121 SKCKIVRDSNGVSGFDKSDLDLEWFMVQHDMENIYMWVFKERPENALGKMQLRSYMNGHS 180
SK K+ RDSNG+SG+DKSDL L+ F+VQHDMEN+YMWVFKE+PENALGKMQLRSYMNGHS
Sbjct: 121 SKSKLTRDSNGLSGYDKSDLQLDSFLVQHDMENMYMWVFKEKPENALGKMQLRSYMNGHS 180
Query: 181 RQGERTFPYSVDRGFVRSHKMQRKHYRGLSNPQCVHGIDLLPSPNLIGLDEEEQKRWIEL 240
R+GER FP+SVD+GFVRSH+MQRKHYRGLSNPQC+HGI+++ SPNL L E+E+K+W EL
Sbjct: 181 REGERPFPFSVDKGFVRSHRMQRKHYRGLSNPQCLHGIEVVYSPNLSVLSEDEKKKWTEL 240
Query: 241 TGRDLNFSIPPEASEFCSWRNLPSTEFELERPLPPLKTNSHPPPRKLLNGASLNLSTRPT 300
TGRD+NF+IP EAS++ SWRNLP+TEFE ERPLP K N H +K LNG LNLST
Sbjct: 241 TGRDVNFAIPAEASDYGSWRNLPNTEFEAERPLPLAKANGHTHLKK-LNGTCLNLSTHSP 300
Query: 301 NHVNGGGMDLSPKGNKRKKDLFLHGNDEDCCLLISQHNERVQDIEIHPVEPPWLNDFSGA 360
+H NKRK+D GN +D S +E+ D++IH E PW NDFSG
Sbjct: 301 DHAVDTVEVQLAGSNKRKRDCLALGNCDD-----SSSSEKSLDMKIHATELPWSNDFSGV 360
Query: 361 MRNVYGPVTAAKTIYEDEQGYLIIVSLPLADLKRVKVTWWNNLTHGVVKITSVSTGCMPF 420
M+NVYGPVTAAKTIYED++G+LI++SLP D RVKVTW N HG+VKI+ VST C PF
Sbjct: 361 MKNVYGPVTAAKTIYEDDRGFLIVMSLPFVDSGRVKVTWRNTPAHGIVKISCVSTACEPF 420
Query: 421 VKRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPDDAKLEAYGDETGTGLEIMVPKHRVG 480
+KR+DRTFKLTDP+PEHCPPGEF+RE+ LP RIPDDAKLEAY DETGT LE++VPKHR+G
Sbjct: 421 IKRHDRTFKLTDPTPEHCPPGEFVREVSLPNRIPDDAKLEAYRDETGTTLEVLVPKHRMG 480
Query: 481 PEEHEVRVCLRP 493
PEEHEVRVCLRP
Sbjct: 481 PEEHEVRVCLRP 485
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..40 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 47..66 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 10..26 |
| None | No IPR available | PANTHER | PTHR33981 | EXPRESSED PROTEIN | coord: 1..502 |
| None | No IPR available | PANTHER | PTHR33981:SF10 | HSP20-LIKE CHAPERONES SUPERFAMILY PROTEIN ISOFORM 1 | coord: 1..502 |
| None | No IPR available | CDD | cd06464 | ACD_sHsps-like | coord: 374..476
e-value: 1.84909E-4
score: 38.3041 |
Relationships
The following mRNA feature(s) are a part of this gene:
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