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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. CTCTAAAAATGTTGGAACTTCATCTTGTTCAGAATTCGCTCCTCAAGAAGGTCTTGGAGTCGATCAAAGATTTTGTGACCGATGCAAACTTCCATTATTCGGCCACTGGATGCTCGCTTCAGGCCATGGATTCGAGCCATATTACCCTGGTGGTTCTTCTCCTTCGAGCGGAGGCCTTTGAACTATATCGTTGCGACAGAAACATTTCCGTGGGAATGAACTTGAACAACATGTCGAAAATGCTCGAGTGTGCCGGCAATGATGATGCCATTAGAATCAAGGCTGATGACGGCAATGATACTATCACTTTCGTGTTTGAAAGCCCCAGTATGATCTTGCTCTTTCTGTCCTTCTTTAGTAGTTTCAATCATTTTAGAACCTCGTTCTCGTAGTTATGTAGTTTTTAGATTATCGGATTATTTTTCTGTTGTCTTTTGAACTTCTTGATCTGTTAGATTTAAGTAATAGTAGTTGCATCTCAAGGTTCATTTCGTCTCTAAGCATAGTATGATTCTTAGGTCAGTTTCAATGATTGTTAACTAGAAAGGCATCGGACTCTGGATCTGAAGCGAGTATCTGATGCTTTCTTTCTTACCTTTTGTCCGTCCCATCCATGGTATCAGCCCAACGCAAGGTTTCCAATTTTGAGATGAGATTGATGGACATCGATAGCGAGCAACTTGGAATTCCAGATTTAGAGCATCATGCTATTGTTAAAATGCCTTCTGTTGAGTTCGCTAGAATTTGCAAAGATCTCAGCAGCATTGGTGATACTGGTACATCCTAATACCTTTACCTTTCAGTGTTTTATCTGATTTACCTGACAAATTCTTGGATTATGAAAAAATTAATTGACTTCACCGATTCTTACAGTTATAATCTCTGTGACGAGGGAAGATGTCACGTTCTCAACAATAAGCGATATAGGATCTGCAAACATTGTTTGCAGCCAGAACGCTGCTGTAGCCAAGGTCTGCATGCGCCTTAACACTTCAGGGATCTGATTTCATTAACTTAATTCTTTTTTGAATACTGAATTTTGATCTGTCTCAATTTTGGGGCATGCAGCCAGAAGAAGCAACAGTTATAGAGATAAACGAGCCAGTTTCTTTGACATTTTCTTTGAGGTATATGAACTTATTCACCAAGGCTACACCCCTATCTAATACAGTTACCATCAGCCTGTCTTCTGAGCTACCTGCCATTGTTGAGTACAAAATAGCAGAGATGGGACATGTTAGATTTTACATGGATCCCAGTTAG mRNA sequence CTCTAAAAATGTTGGAACTTCATCTTGTTCAGAATTCGCTCCTCAAGAAGGTCTTGGAGTCGATCAAAGATTTTGTGACCGATGCAAACTTCCATTATTCGGCCACTGGATGCTCGCTTCAGGCCATGGATTCGAGCCATATTACCCTGGTGGTTCTTCTCCTTCGAGCGGAGGCCTTTGAACTATATCGTTGCGACAGAAACATTTCCGTGGGAATGAACTTGAACAACATGTCGAAAATGCTCGAGTGTGCCGGCAATGATGATGCCATTAGAATCAAGGCTGATGACGGCAATGATACTATCACTTTCGTGTTTGAAAGCCCCACCCAACGCAAGGTTTCCAATTTTGAGATGAGATTGATGGACATCGATAGCGAGCAACTTGGAATTCCAGATTTAGAGCATCATGCTATTGTTAAAATGCCTTCTGTTGAGTTCGCTAGAATTTGCAAAGATCTCAGCAGCATTGGTGATACTGTTATAATCTCTGTGACGAGGGAAGATGTCACGTTCTCAACAATAAGCGATATAGGATCTGCAAACATTGTTTGCAGCCAGAACGCTGCTGTAGCCAAGCCAGAAGAAGCAACAGTTATAGAGATAAACGAGCCAGTTTCTTTGACATTTTCTTTGAGGTATATGAACTTATTCACCAAGGCTACACCCCTATCTAATACAGTTACCATCAGCCTGTCTTCTGAGCTACCTGCCATTGTTGAGTACAAAATAGCAGAGATGGGACATGTTAGATTTTACATGGATCCCAGTTAG Coding sequence (CDS) ATGTTGGAACTTCATCTTGTTCAGAATTCGCTCCTCAAGAAGGTCTTGGAGTCGATCAAAGATTTTGTGACCGATGCAAACTTCCATTATTCGGCCACTGGATGCTCGCTTCAGGCCATGGATTCGAGCCATATTACCCTGGTGGTTCTTCTCCTTCGAGCGGAGGCCTTTGAACTATATCGTTGCGACAGAAACATTTCCGTGGGAATGAACTTGAACAACATGTCGAAAATGCTCGAGTGTGCCGGCAATGATGATGCCATTAGAATCAAGGCTGATGACGGCAATGATACTATCACTTTCGTGTTTGAAAGCCCCACCCAACGCAAGGTTTCCAATTTTGAGATGAGATTGATGGACATCGATAGCGAGCAACTTGGAATTCCAGATTTAGAGCATCATGCTATTGTTAAAATGCCTTCTGTTGAGTTCGCTAGAATTTGCAAAGATCTCAGCAGCATTGGTGATACTGTTATAATCTCTGTGACGAGGGAAGATGTCACGTTCTCAACAATAAGCGATATAGGATCTGCAAACATTGTTTGCAGCCAGAACGCTGCTGTAGCCAAGCCAGAAGAAGCAACAGTTATAGAGATAAACGAGCCAGTTTCTTTGACATTTTCTTTGAGGTATATGAACTTATTCACCAAGGCTACACCCCTATCTAATACAGTTACCATCAGCCTGTCTTCTGAGCTACCTGCCATTGTTGAGTACAAAATAGCAGAGATGGGACATGTTAGATTTTACATGGATCCCAGTTAG Protein sequence MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHITLVVLLLRAEAFELYRCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMDIDSEQLGIPDLEHHAIVKMPSVEFARICKDLSSIGDTVIISVTREDVTFSTISDIGSANIVCSQNAAVAKPEEATVIEINEPVSLTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYKIAEMGHVRFYMDPS
Homology
BLAST of CmaCh02G007680 vs. ExPASy Swiss-Prot
Match: O82797 (Proliferating cell nuclear antigen OS=Nicotiana tabacum OX=4097 GN=PCNA PE=2 SV=1) HSP 1 Score: 391.0 bits (1003), Expect = 1.1e-107 Identity = 197/253 (77.87%), Postives = 224/253 (88.54%), Query Frame = 0
Query: 1 MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHITLVVLLLRAEAFELY 60
MLEL LVQ SLLKKVLESIKD V DANF SATG SLQAMDSSH+ LV LLLR+E FE Y
Sbjct: 1 MLELRLVQGSLLKKVLESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY 60
Query: 61 RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
RCDRNIS+GMNL NM+KML+CAGNDD I +KADDG+DT+TF+FESPTQ K+++FEM+LMD
Sbjct: 61 RCDRNISMGMNLANMAKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMD 120
Query: 121 IDSEQLGIPDLEHHAIVKMPSVEFARICKDLSSIGDTVIISVTREDVTFSTISDIGSANI 180
IDSE LGIP+ E+HAIV+MPS EF+RICKDLSSIGDTV+ISVT+E V FST DIG+ANI
Sbjct: 121 IDSEHLGIPEAEYHAIVRMPSAEFSRICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANI 180
Query: 181 VCSQNAAVAKPEEATVIEINEPVSLTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK 240
VC QN V KPEEATVIE+NEPVSLTF+LRY+N FTKATPLSNTVTISLSSELP +VEYK
Sbjct: 181 VCRQNTTVDKPEEATVIEMNEPVSLTFALRYLNSFTKATPLSNTVTISLSSELPVVVEYK 240
Query: 241 IAEMGHVRFYMDP 254
IAEMG++RFY+ P
Sbjct: 241 IAEMGYIRFYLAP 253
BLAST of CmaCh02G007680 vs. ExPASy Swiss-Prot
Match: P24314 (Proliferating cell nuclear antigen OS=Catharanthus roseus OX=4058 PE=2 SV=1) HSP 1 Score: 389.8 bits (1000), Expect = 2.3e-107 Identity = 195/253 (77.08%), Postives = 224/253 (88.54%), Query Frame = 0
Query: 1 MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHITLVVLLLRAEAFELY 60
MLEL LVQ SLLKKVLES+KD VTDANF SA+G SLQAMDSSH+ LV LLLR+E FE Y
Sbjct: 1 MLELRLVQGSLLKKVLESLKDLVTDANFDCSASGFSLQAMDSSHVALVALLLRSEGFEHY 60
Query: 61 RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
RCDRN S+GMNLNNM+KML+CAGNDD I +KADDG+DT+TF+FESPTQ K+S+FEM+LMD
Sbjct: 61 RCDRNPSMGMNLNNMAKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKISDFEMKLMD 120
Query: 121 IDSEQLGIPDLEHHAIVKMPSVEFARICKDLSSIGDTVIISVTREDVTFSTISDIGSANI 180
IDSE LGIP+ E+HAIV+MPS EFARICKDLSSIGDTV+ISVT+E V FST DIG+ANI
Sbjct: 121 IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANI 180
Query: 181 VCSQNAAVAKPEEATVIEINEPVSLTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK 240
VC QN V KP+EAT+IE+NEPVSLTF+LRY+N FTKATPLSN VTISLSSELP +VEYK
Sbjct: 181 VCRQNTTVDKPDEATIIEMNEPVSLTFALRYLNSFTKATPLSNNVTISLSSELPVVVEYK 240
Query: 241 IAEMGHVRFYMDP 254
IAEMG++RFY+ P
Sbjct: 241 IAEMGYIRFYLAP 253
BLAST of CmaCh02G007680 vs. ExPASy Swiss-Prot
Match: Q00268 (Proliferating cell nuclear antigen OS=Daucus carota OX=4039 PE=3 SV=1) HSP 1 Score: 388.3 bits (996), Expect = 6.8e-107 Identity = 195/253 (77.08%), Postives = 224/253 (88.54%), Query Frame = 0
Query: 1 MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHITLVVLLLRAEAFELY 60
MLEL LVQ SLLKKV++SIKD V DANF SATG SLQAMDSSH+ LV +LLR+E FE Y
Sbjct: 1 MLELRLVQGSLLKKVMDSIKDLVNDANFDCSATGFSLQAMDSSHVALVAVLLRSEGFEHY 60
Query: 61 RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
RCDRNIS+GMNL NM+KML+CAGNDD I IKADDG+DT+TF+FESPTQ K+++FEM+LMD
Sbjct: 61 RCDRNISMGMNLGNMAKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMD 120
Query: 121 IDSEQLGIPDLEHHAIVKMPSVEFARICKDLSSIGDTVIISVTREDVTFSTISDIGSANI 180
IDSE LGIP+ E+HAIV+MPS EFARICKDLSSIGDTV+ISVT+E V FST DIG+ANI
Sbjct: 121 IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANI 180
Query: 181 VCSQNAAVAKPEEATVIEINEPVSLTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK 240
VC QN V KPEEATVIE+NEPVSLTF+LRYMN FTKA+PLS+TVTISLSSELP +VEYK
Sbjct: 181 VCRQNTTVDKPEEATVIEMNEPVSLTFALRYMNSFTKASPLSSTVTISLSSELPVVVEYK 240
Query: 241 IAEMGHVRFYMDP 254
IAEMG++RFY+ P
Sbjct: 241 IAEMGYIRFYLAP 253
BLAST of CmaCh02G007680 vs. ExPASy Swiss-Prot
Match: O82134 (Proliferating cell nuclear antigen OS=Pisum sativum OX=3888 GN=PCNA PE=2 SV=1) HSP 1 Score: 385.6 bits (989), Expect = 4.4e-106 Identity = 194/253 (76.68%), Postives = 224/253 (88.54%), Query Frame = 0
Query: 1 MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHITLVVLLLRAEAFELY 60
MLEL LVQ SLLKKVLESIK+ V DANF S+TG SLQAMDSSH+ LV LLLR+E FE Y
Sbjct: 1 MLELRLVQGSLLKKVLESIKELVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHY 60
Query: 61 RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
RCDRN+S+GMNLNNM+KML+CAGNDD I IKADDG+DT+TF+FESPTQ K+S+FEM+LMD
Sbjct: 61 RCDRNLSMGMNLNNMAKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKISDFEMKLMD 120
Query: 121 IDSEQLGIPDLEHHAIVKMPSVEFARICKDLSSIGDTVIISVTREDVTFSTISDIGSANI 180
IDSE LGIP+ E+HAIV+MPS EFARICKDLSSIGDTV+I+V++E V FST DIGSANI
Sbjct: 121 IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDTVVIAVSKEGVKFSTKGDIGSANI 180
Query: 181 VCSQNAAVAKPEEATVIEINEPVSLTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK 240
VC QN V KPEEATVIE+NEPV+L F+LRYMN FTKATPLS++VTISLS+ELP +VEYK
Sbjct: 181 VCRQNTTVDKPEEATVIEMNEPVALQFALRYMNSFTKATPLSSSVTISLSNELPVVVEYK 240
Query: 241 IAEMGHVRFYMDP 254
IAEMG+VRFY+ P
Sbjct: 241 IAEMGYVRFYLAP 253
BLAST of CmaCh02G007680 vs. ExPASy Swiss-Prot
Match: Q9MAY3 (Proliferating cell nuclear antigen OS=Populus nigra OX=3691 GN=PCNA PE=2 SV=1) HSP 1 Score: 380.2 bits (975), Expect = 1.9e-104 Identity = 190/253 (75.10%), Postives = 221/253 (87.35%), Query Frame = 0
Query: 1 MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHITLVVLLLRAEAFELY 60
MLEL LVQ SLLKKVLESIKD V DANF +S++G SLQ+MDSSH+ LV LLL++E FE Y
Sbjct: 1 MLELRLVQGSLLKKVLESIKDLVNDANFDFSSSGFSLQSMDSSHVALVALLLKSEGFEHY 60
Query: 61 RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
RCDRN S+GMNL NMSKML+CAGNDD I IK DDG+DT+TF+FESPTQ K+++FEM+LMD
Sbjct: 61 RCDRNTSMGMNLGNMSKMLKCAGNDDIITIKGDDGSDTVTFMFESPTQDKIADFEMKLMD 120
Query: 121 IDSEQLGIPDLEHHAIVKMPSVEFARICKDLSSIGDTVIISVTREDVTFSTISDIGSANI 180
IDSE LGIP+ E+HAIVKMPS EFARICKDL+SIGDTV+ISVT+E V FST DIG+ANI
Sbjct: 121 IDSEHLGIPEAEYHAIVKMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANI 180
Query: 181 VCSQNAAVAKPEEATVIEINEPVSLTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK 240
V QN V KPE+ATVIE+NEPVS+TF+LRYMN FTKATPLSNTVTIS+S +LP +VEYK
Sbjct: 181 VLRQNTTVDKPEDATVIEMNEPVSMTFALRYMNSFTKATPLSNTVTISMSPDLPVVVEYK 240
Query: 241 IAEMGHVRFYMDP 254
IAEMG+VRFY+ P
Sbjct: 241 IAEMGYVRFYLAP 253
BLAST of CmaCh02G007680 vs. TAIR 10
Match: AT2G29570.1 (proliferating cell nuclear antigen 2 ) HSP 1 Score: 377.5 bits (968), Expect = 8.6e-105 Identity = 189/253 (74.70%), Postives = 220/253 (86.96%), Query Frame = 0
Query: 1 MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHITLVVLLLRAEAFELY 60
MLEL LVQ SLLKKVLE++KD V DANF S TG SLQAMDSSH+ LV LLLR+E FE Y
Sbjct: 1 MLELRLVQGSLLKKVLEAVKDLVNDANFDCSTTGFSLQAMDSSHVALVSLLLRSEGFEHY 60
Query: 61 RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
RCDRN+S+GMNL NMSKML+CAGNDD I IKADDG+DT+TF+FESPTQ K+++FEM+LMD
Sbjct: 61 RCDRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMD 120
Query: 121 IDSEQLGIPDLEHHAIVKMPSVEFARICKDLSSIGDTVIISVTREDVTFSTISDIGSANI 180
IDSE LGIPD E+H+IV+MPS EF+RICKDLSSIGDTV+ISVT+E V FST DIG+ANI
Sbjct: 121 IDSEHLGIPDAEYHSIVRMPSGEFSRICKDLSSIGDTVVISVTKEGVKFSTAGDIGTANI 180
Query: 181 VCSQNAAVAKPEEATVIEINEPVSLTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK 240
V QN V KPE+A VIE+NEPVSL+F+LRYMN FTKATPLS TVTISLSSELP +VEYK
Sbjct: 181 VLRQNTTVDKPEDAIVIEMNEPVSLSFALRYMNSFTKATPLSETVTISLSSELPVVVEYK 240
Query: 241 IAEMGHVRFYMDP 254
+AEMG++R+Y+ P
Sbjct: 241 VAEMGYIRYYLAP 253
BLAST of CmaCh02G007680 vs. TAIR 10
Match: AT1G07370.1 (proliferating cellular nuclear antigen 1 ) HSP 1 Score: 377.1 bits (967), Expect = 1.1e-104 Identity = 190/253 (75.10%), Postives = 220/253 (86.96%), Query Frame = 0
Query: 1 MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHITLVVLLLRAEAFELY 60
MLEL LVQ SLLKKVLESIKD V DANF S+TG SLQAMDSSH+ LV LLLR+E FE Y
Sbjct: 1 MLELRLVQGSLLKKVLESIKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHY 60
Query: 61 RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
RCDRN+S+GMNL NMSKML+CAGNDD I IKADDG DT+TF+FESPTQ K+++FEM+LMD
Sbjct: 61 RCDRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGGDTVTFMFESPTQDKIADFEMKLMD 120
Query: 121 IDSEQLGIPDLEHHAIVKMPSVEFARICKDLSSIGDTVIISVTREDVTFSTISDIGSANI 180
IDSE LGIPD E+H+IV+MPS EF+RICKDLSSIGDTV+ISVT+E V FST DIG+ANI
Sbjct: 121 IDSEHLGIPDAEYHSIVRMPSNEFSRICKDLSSIGDTVVISVTKEGVKFSTAGDIGTANI 180
Query: 181 VCSQNAAVAKPEEATVIEINEPVSLTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK 240
V QN V KPE+A VIE+ EPVSL+F+LRYMN FTKATPLS+TVTISLSSELP +VEYK
Sbjct: 181 VLRQNTTVDKPEDAIVIEMKEPVSLSFALRYMNSFTKATPLSDTVTISLSSELPVVVEYK 240
Query: 241 IAEMGHVRFYMDP 254
+AEMG++R+Y+ P
Sbjct: 241 VAEMGYIRYYLAP 253
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| O82797 | 1.1e-107 | 77.87 | Proliferating cell nuclear antigen OS=Nicotiana tabacum OX=4097 GN=PCNA PE=2 SV=... | [more] |
| P24314 | 2.3e-107 | 77.08 | Proliferating cell nuclear antigen OS=Catharanthus roseus OX=4058 PE=2 SV=1 | [more] |
| Q00268 | 6.8e-107 | 77.08 | Proliferating cell nuclear antigen OS=Daucus carota OX=4039 PE=3 SV=1 | [more] |
| O82134 | 4.4e-106 | 76.68 | Proliferating cell nuclear antigen OS=Pisum sativum OX=3888 GN=PCNA PE=2 SV=1 | [more] |
| Q9MAY3 | 1.9e-104 | 75.10 | Proliferating cell nuclear antigen OS=Populus nigra OX=3691 GN=PCNA PE=2 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT2G29570.1 | 8.6e-105 | 74.70 | proliferating cell nuclear antigen 2 | [more] |
| AT1G07370.1 | 1.1e-104 | 75.10 | proliferating cellular nuclear antigen 1 | [more] |
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR000730 | Proliferating cell nuclear antigen, PCNA | PRINTS | PR00339 | PCNACYCLIN | coord: 203..217
score: 69.21
coord: 56..80
score: 61.9
coord: 110..132
score: 63.56
coord: 10..29
score: 62.38
coord: 241..254
score: 38.36
coord: 34..52
score: 67.92 |
| IPR000730 | Proliferating cell nuclear antigen, PCNA | TIGRFAM | TIGR00590 | TIGR00590 | coord: 1..253
e-value: 7.2E-107
score: 354.6 |
| IPR000730 | Proliferating cell nuclear antigen, PCNA | HAMAP | MF_00317 | DNApol_clamp_arch | coord: 2..254
score: 17.382534 |
| None | No IPR available | GENE3D | 3.70.10.10 | | coord: 1..254
e-value: 4.8E-101
score: 339.4 |
| None | No IPR available | PANTHER | PTHR11352:SF8 | PROLIFERATING CELL NUCLEAR ANTIGEN | coord: 1..253 |
| None | No IPR available | PANTHER | PTHR11352 | PROLIFERATING CELL NUCLEAR ANTIGEN | coord: 1..253 |
| None | No IPR available | CDD | cd00577 | PCNA | coord: 6..253
e-value: 2.64347E-85
score: 252.55 |
| None | No IPR available | SUPERFAMILY | 55979 | DNA clamp | coord: 127..253 |
| None | No IPR available | SUPERFAMILY | 55979 | DNA clamp | coord: 1..126 |
| IPR022649 | Proliferating cell nuclear antigen, PCNA, C-terminal | PFAM | PF02747 | PCNA_C | coord: 127..253
e-value: 2.6E-52
score: 176.4 |
| IPR022648 | Proliferating cell nuclear antigen, PCNA, N-terminal | PFAM | PF00705 | PCNA_N | coord: 1..124
e-value: 1.9E-48
score: 163.3 |
| IPR022659 | Proliferating cell nuclear antigen, PCNA, conserved site | PROSITE | PS00293 | PCNA_2 | coord: 61..79 |
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0050790 |
regulation of catalytic activity |
| biological_process |
GO:0006275 |
regulation of DNA replication |
| cellular_component |
GO:0005634 |
nucleus |
| molecular_function |
GO:0003677 |
DNA binding |
| molecular_function |
GO:0030337 |
DNA polymerase processivity factor activity |
|
