CmaCh02G007290 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh02G007290
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUbiquitin-like domain-containing protein
LocationCma_Chr02: 4421697 .. 4426511 (-)
RNA-Seq ExpressionCmaCh02G007290
SyntenyCmaCh02G007290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAGAGGATTAATTAATTATTAGTTGCTTGACCAACTGATCATCGTCTTAGTTCTCAAGGTTACCGACGCGCCTCTGGTGCGGCGCCAAATTGAAATGGAGCTCGGAGCGATGGCGACTACCTCCGAAGGTAATGCCAAGTCCATAGCTATCAGCGTCAAGTTCGCCGGGAAGTCAATACGTGTTACTGCTCCCTGTGATTCGACCGTCAAGGATCTGAAGTCCCTTCTTCAACCTTTAACCAACGTCCTACCTCGCGGCCAGAAGCTCATTTTCAAAGGTTTTGGATTCGAATTTTTGTGGAAGGAATTTGTCTGAGAGAGGTGGATTTGAATTTTTGAAGTTCGTGATATGTGATTACAGGGAAGGTTTTGGCAGACGAGATGACTTTGGCGGCGTCGGAGATCAATAATGGAGCGAAAGTGATGCTTATGGCTTCTCAGGGATTGTATCAAGGGGTAGTTGGTTTTTCCATTCGTTCTTTTTTTTCAATTGAAGTCTTCTTTCTTACATCTTGAATTTTATTTTGCTAAATCTACATTGTGATCTTCCGAGTGGATCAAATTGAGGGTTTTACATGTCATGTATCTCGTTTATTGAAGTCTTAGGGTTAAATTGTTAAAACTGCGAGAATTGGTCCCAAGGACGACTTATCTGTTAAACATTGTGGACTATATGTTGGCGAAATGTTAAGGGAATGCATATTGTTATATGTTTTCATTCTTTGGATTTGACTGAATAGGATGGCCCTATCCTGCTCGAAGCGAGGACTCGTCCCAGAGAAAGGAGCACGCCAAATGCGAAGAATTTGGTTGATGAAAAGAAGCGTGTCTCCGTAGATAAAAGCCGGTTTGAAAGATGGAAGGCCACTGGAGTGATAGCATTATCTGACTGCAATTTGAAGGTATAGAAGAAACCATCGCTTTCACAGAACAAAATAAAACTGTGATTGTTTCTCTCAAATCTTCATTGGAATCTCCCATAGGCAATTCCCGATGAAGTGTGGTCTTGTGAAGCTTCAGCGAGAGTAATTGATTTGAGCAACAACTCTATTAAGCATGTTCCTTCTCAAGTTAGCTGCCTAAGTTCAACGCAGGTGAAGTTAATTGCTGTCTTCCTTTTCACCTTTTCATTTGAGTGGTTTAAATTCCTCTTCGTAAGATCTCTCCAATTTTATCACGATCTGCAGAAATTATTACTGAATGTTAATGAGATATCCGATGCATCTATAAGTTGGGACAGTTTAGCGTTTTTGAAGCGTCTAACAGTTTTATCTCTGTCCCATAATCTGTAAGTAGCTTCAGTTGTTTCAAGGATTAGTCACAATCTAATTTTTGCAATATCAGAATACAAAAGTCTTAAGTGACTATATTATGTCATCCGGTACCCATAAACATCAAACAAGGCTGGTTGATGCAGGTTAACTACTTTGCCTTCTGCACTTGGCAGCCTGACTTCACTAAAGCAACTGCATGTGACTAATAACAAATTGACGAGTATCCCAGATGAAATAAGATTTTTGACCCAACTTGAAGTTTTGAAAGTCAGCAAAAATAGGTAATGCTGAGTGGCATATGCTCACACAAATTGCTCATCAGTAAAACGCTCAACCGTGGTGAAGATATTCTTTACTAAATAATTTACTTACACTTTTATTTTTTGTGGTGTAGATAGTTCAACATTCCCTAGTTTATTTAATGTGAATTAATTTTTTCGTCGTTTTCTATTACTAATGCCTCTCACCATACATGGGGCAGGATAAGCATTGTTCCTTCAACTGTGGGGGAATGTAGTTCTCTTACTGAGGTACAACTTACCAAACTTATTTTTAGAAGAACTTTTCTTCTCTTTTTATTAATCTTAGAAATATTGATTCCCATAATTGTCTCCCTCACCTAAAGTTCTATCGACATGCTTGGCTATGGTACAGGTGGATTTGTCATCAAATCTTCTGTCAGAGTTGCCAGAGACACTTGGTTGTCTGCACAATTTGAAGGTTCCTACTTAATTCTCTATCCAGATCATTTACTTTCTTCGTATGTTTCATTCTAATCTCAATAGTGGAAATTAAGGGACGTAATGCAGATACATGAAATAGAGGCACATTTCTTTTACGGTTCATTAGGAGCCGTAATTAATTACGTTGTTGCTGTTAGGGGCAAATCTTTGTGGGTACCAATACCATACATGACATTTCTTGTCTTTCTTTTCACTCTCTTTATTTGCTTACTGACAATTCATTTAAGTAGAGCGTATACTTGCATCTTTTTAGTATCTAGTTTCTATTATTATTTCAACCTAAGAATTCTAGATTCTGTTTTCCAGTTAATTTTGAAGTAGTTCATTGTTATTAGATTCAGGGAAGTAATCCATCTATTTTTCCAAATGTATGATAATTATTTTTGGAAGTAAACGAAGTACGATAACCTGAAAGCCACCCTATCTTGGTCAATACTAAATTTACCAGCACCAATTTTACAACAAAAAGAATCCTCTCGGTAGGGAATCTCTGCGACCACTTGACTATAATTGTAATACTCCTATTTTCTGTAACTGTGACGTCAAGTGAACCCTTAGCTAAAAAAGGTTACTTTTTTCCAGTTAACAAGTCCGAGAAGTAGTAAGCAGAACTGGTTTGACACACTTAATCTGAGTAATTGACCCTTCTTGATTGGCATGTTCCCTACAAGCAAGCATATATGAGAACTTCTTAAGAACGGAATTGCAATTGTTTAGATTTCAGATTCCTTAAAAGAAAACGTGTAGTGAAGAAGCCACTCCCCTGCAGTCTGTCTCACCTGCACCAAAGAAATCCATTATCCACCACTCCTAACCTCTATTTCAGAGTGGCTAATGGCAACAATAATAGATTTAATTGGCAAGTCTCTTTCAGAAAATACCCAAACTCTTTTGAAGAGGTTCTCAATCCTGCCAAAATTGGTCGCAAGGAAGAGGAGTGTCATTGGTAAAGTACAGAGGGCTAGCATGAATAAAACTGTACCAACTTTCAAACCTTCCACAGATCAAGATCTATTCCGACTAATAGCTTGTATGAATCACTGCCAGGAAAAATAAGAACGGATGGAGAAGGTAAACTTTGATGAATACCCTTGAAGCTAAAATCTTACTCGCTGGTCTTACATTGAGCAGAGTGGAAATTTCGTGTCAGAAACTCTCCTCATATCTCCAAAACCCTTTGCTCCTAGGACTGAAAGAAGAAAATATCACTCGGTGTCCAATTCCAAGCTGACCCAAGTTCTAGCTTGCAAAGTAGCCTTTTTTCCGTTTCCTCCAATCCTCAAGAGTTCTAAATTCTAATTGCTTCCGTTTTCCTTTTTTCCACAAAAGCAACCTTGCAAGGTGAAATTATATGCGTACATAAGGCTTCAAACAATCTCCAAGAACCTCAGCAACAGCCTGATACAAATAAGTAGATAGGTGTTTAGAATGAGACGCAAGTTTCCCTAGAGCTTGCTCCCAACCTTGAAACCTTGACTAATTTCACAGTATTAACCTCCTGACTTACAAATATGGCATTAGAAAAACCATATGATATATAATATCCTATATATGTGGCTATCATAATTTGAATTGCGACTCCAAAAGAACATATAAGGTTGAAAACTGTTGCTTTTATTATTAAGTCAATCTATGATGATTTTTCGTAATAGCCTTTCGAACTTCTTTATTAAAGGACATTCCAAATGAGCTACATGTAACCAAAAATACTTATTGTCGATTCATCTTTAGCCTCAAACTTAAGCTATTGGTTGAGGTAATTTTAATCATTTAACATGTCATCAAGTTTTGTTCTTTACAGGTGTTTGTTTTACATTTTATTATAATGATTCTTCATATGTGATAATGATTTCTCTTATCTGAACAGTTTTTATGAAGATAAGTGGTAACTATCTTAACAAGTTGTTCCAATATATATTCTGCGACGTGTAGAGAAACATACTCAACACACACAGCCTCATATTATGGTTCTTTTTATTATTTAGACTACGCATAACCTTAGCTCCTAATTCCATGCACATTCGTATTCCCATATAGCGGTACTCAACTGACTCCCAAGTCCCAACATATGTAAATTGAGCTGGGTGTGTGGCTTTTAAGAACTTCAATAGGAGATTCCTGTCTTAATTATTTTGCCATGTACTGCAGGCTTTGCATATCAATCATAACGGCCTAAGGTCCCTCCCTACTACACTATTTAAGATGTGCATCCACCTCTCTACACTTGATCTCCACCACACAGAAATCACCATAGATCTCCTCCGGCAGGTGTGTCCTCATGCTGCAATTGTTTGGATCAATCTATGCCTGCTTGATTAATTTGACCATCTTTTGTGATAGTATGAAGGATGGGAAGCTTTTGATGAACGTCGGCGTTCAAAGCATCAGAAGCAACTAGATTTTCGCGTTATGAGCCAGGCTGAATTTGATGAAGGTGCAGATAAACATTGATGCTTTATGATTTATTGCTTTTAAAGTCAACATGCAGCAACTGTCTCGTTTTTTCTGTAAAATACATTTGGTTAAATTAATGCGACATTGGTCCTGCCAGAACCAGAAAATTTCAGGCTTACATTAGCTTCATGTTAGATTATGGAAATCGTTGGGGGTGAATTTAGGTAATCATCTCTTGGCTTGGCTAATTGTCAAAATATTTGAGATGTATTGTCCGAATGTCCCTTTTTCATTTCCTTCCTGCGAGTGCGAGGTGTGGAGATAGGGACAGATGATTCCAATGGAGCCATTCACGTCTTCTAAAGCTCTCACTTAATCAATTTAAGAACAGGAGAATCTTCAA

mRNA sequence

GGAGAGGATTAATTAATTATTAGTTGCTTGACCAACTGATCATCGTCTTAGTTCTCAAGGTTACCGACGCGCCTCTGGTGCGGCGCCAAATTGAAATGGAGCTCGGAGCGATGGCGACTACCTCCGAAGGTAATGCCAAGTCCATAGCTATCAGCGTCAAGTTCGCCGGGAAGTCAATACGTGTTACTGCTCCCTGTGATTCGACCGTCAAGGATCTGAAGTCCCTTCTTCAACCTTTAACCAACGTCCTACCTCGCGGCCAGAAGCTCATTTTCAAAGGGAAGGTTTTGGCAGACGAGATGACTTTGGCGGCGTCGGAGATCAATAATGGAGCGAAAGTGATGCTTATGGCTTCTCAGGGATTGTATCAAGGGGATGGCCCTATCCTGCTCGAAGCGAGGACTCGTCCCAGAGAAAGGAGCACGCCAAATGCGAAGAATTTGGTTGATGAAAAGAAGCGTGTCTCCGTAGATAAAAGCCGGTTTGAAAGATGGAAGGCCACTGGAGTGATAGCATTATCTGACTGCAATTTGAAGGCAATTCCCGATGAAGTGTGGTCTTGTGAAGCTTCAGCGAGAGTAATTGATTTGAGCAACAACTCTATTAAGCATGTTCCTTCTCAAGTTAGCTGCCTAAGTTCAACGCAGAAATTATTACTGAATGTTAATGAGATATCCGATGCATCTATAAGTTGGGACAGTTTAGCGTTTTTGAAGCGTCTAACAGTTTTATCTCTGTCCCATAATCTGTTAACTACTTTGCCTTCTGCACTTGGCAGCCTGACTTCACTAAAGCAACTGCATGTGACTAATAACAAATTGACGAGTATCCCAGATGAAATAAGATTTTTGACCCAACTTGAAGTTTTGAAAGTCAGCAAAAATAGGATAAGCATTGTTCCTTCAACTGTGGGGGAATGTAGTTCTCTTACTGAGGTGGATTTGTCATCAAATCTTCTGTCAGAGTTGCCAGAGACACTTGGTTGTCTGCACAATTTGAAGGCTTTGCATATCAATCATAACGGCCTAAGGTCCCTCCCTACTACACTATTTAAGATGTGCATCCACCTCTCTACACTTGATCTCCACCACACAGAAATCACCATAGATCTCCTCCGGCAGTATGAAGGATGGGAAGCTTTTGATGAACGTCGGCGTTCAAAGCATCAGAAGCAACTAGATTTTCGCGTTATGAGCCAGGCTGAATTTGATGAAGGTGCAGATAAACATTGATGCTTTATGATTTATTGCTTTTAAAGTCAACATGCAGCAACTGTCTCGTTTTTTCTGTAAAATACATTTGGTTAAATTAATGCGACATTGGTCCTGCCAGAACCAGAAAATTTCAGGCTTACATTAGCTTCATGTTAGATTATGGAAATCGTTGGGGGTGAATTTAGGTAATCATCTCTTGGCTTGGCTAATTGTCAAAATATTTGAGATGTATTGTCCGAATGTCCCTTTTTCATTTCCTTCCTGCGAGTGCGAGGTGTGGAGATAGGGACAGATGATTCCAATGGAGCCATTCACGTCTTCTAAAGCTCTCACTTAATCAATTTAAGAACAGGAGAATCTTCAA

Coding sequence (CDS)

ATGGAGCTCGGAGCGATGGCGACTACCTCCGAAGGTAATGCCAAGTCCATAGCTATCAGCGTCAAGTTCGCCGGGAAGTCAATACGTGTTACTGCTCCCTGTGATTCGACCGTCAAGGATCTGAAGTCCCTTCTTCAACCTTTAACCAACGTCCTACCTCGCGGCCAGAAGCTCATTTTCAAAGGGAAGGTTTTGGCAGACGAGATGACTTTGGCGGCGTCGGAGATCAATAATGGAGCGAAAGTGATGCTTATGGCTTCTCAGGGATTGTATCAAGGGGATGGCCCTATCCTGCTCGAAGCGAGGACTCGTCCCAGAGAAAGGAGCACGCCAAATGCGAAGAATTTGGTTGATGAAAAGAAGCGTGTCTCCGTAGATAAAAGCCGGTTTGAAAGATGGAAGGCCACTGGAGTGATAGCATTATCTGACTGCAATTTGAAGGCAATTCCCGATGAAGTGTGGTCTTGTGAAGCTTCAGCGAGAGTAATTGATTTGAGCAACAACTCTATTAAGCATGTTCCTTCTCAAGTTAGCTGCCTAAGTTCAACGCAGAAATTATTACTGAATGTTAATGAGATATCCGATGCATCTATAAGTTGGGACAGTTTAGCGTTTTTGAAGCGTCTAACAGTTTTATCTCTGTCCCATAATCTGTTAACTACTTTGCCTTCTGCACTTGGCAGCCTGACTTCACTAAAGCAACTGCATGTGACTAATAACAAATTGACGAGTATCCCAGATGAAATAAGATTTTTGACCCAACTTGAAGTTTTGAAAGTCAGCAAAAATAGGATAAGCATTGTTCCTTCAACTGTGGGGGAATGTAGTTCTCTTACTGAGGTGGATTTGTCATCAAATCTTCTGTCAGAGTTGCCAGAGACACTTGGTTGTCTGCACAATTTGAAGGCTTTGCATATCAATCATAACGGCCTAAGGTCCCTCCCTACTACACTATTTAAGATGTGCATCCACCTCTCTACACTTGATCTCCACCACACAGAAATCACCATAGATCTCCTCCGGCAGTATGAAGGATGGGAAGCTTTTGATGAACGTCGGCGTTCAAAGCATCAGAAGCAACTAGATTTTCGCGTTATGAGCCAGGCTGAATTTGATGAAGGTGCAGATAAACATTGA

Protein sequence

MELGAMATTSEGNAKSIAISVKFAGKSIRVTAPCDSTVKDLKSLLQPLTNVLPRGQKLIFKGKVLADEMTLAASEINNGAKVMLMASQGLYQGDGPILLEARTRPRERSTPNAKNLVDEKKRVSVDKSRFERWKATGVIALSDCNLKAIPDEVWSCEASARVIDLSNNSIKHVPSQVSCLSSTQKLLLNVNEISDASISWDSLAFLKRLTVLSLSHNLLTTLPSALGSLTSLKQLHVTNNKLTSIPDEIRFLTQLEVLKVSKNRISIVPSTVGECSSLTEVDLSSNLLSELPETLGCLHNLKALHINHNGLRSLPTTLFKMCIHLSTLDLHHTEITIDLLRQYEGWEAFDERRRSKHQKQLDFRVMSQAEFDEGADKH
Homology
BLAST of CmaCh02G007290 vs. ExPASy Swiss-Prot
Match: P0C895 (LRR repeats and ubiquitin-like domain-containing protein At2g30105 OS=Arabidopsis thaliana OX=3702 GN=At2g30105 PE=1 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 2.8e-120
Identity = 224/363 (61.71%), Postives = 285/363 (78.51%), Query Frame = 0

Query: 16  SIAISVKFAGKSIRVTAPCDSTVKDLKSLLQPLTNVLPRGQKLIFKGKVLADEMTLAASE 75
           +I ++VKF GKSI ++   D TVKDLKS LQP+TNVLPRGQKLIFKGKVL +  TL  S+
Sbjct: 12  TIKLTVKFGGKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSD 71

Query: 76  INNGAKVMLMASQGLYQGDGPILLEARTRPRERSTPNAKNLVDEKK-RVSVDKSRFERWK 135
           + +GAK+MLMASQGL+QG+GPIL EA  RP  R+  + K  VD++K  V VDK+R +RWK
Sbjct: 72  VGSGAKLMLMASQGLHQGEGPILKEASIRPISRTVVSDK--VDQRKPSVLVDKNRTDRWK 131

Query: 136 ATGVIALSDCNLKAIPDEVWSCEASARVIDLSNNSIKHVPSQVSCLSSTQKLLLNVNEIS 195
           ATGVIAL+  NLK IP+EVW C +  RV+D+S N IK VP+++S   S QKL L  N +S
Sbjct: 132 ATGVIALAQANLKEIPEEVWDCGSGVRVLDISENFIKEVPAKISSFGSMQKLFLQGNGLS 191

Query: 196 DASISWDSLAFLKRLTVLSLSHNLLTTLPSALGSLTSLKQLHVTNNKLTSIPDEIRFLTQ 255
           D SI W+ +A LKRL +LS+SHN LT LPSA+GSLTSL+QL VTNNKLTS+P+E+  LTQ
Sbjct: 192 DESIQWEGIASLKRLMLLSISHNNLTVLPSAMGSLTSLRQLDVTNNKLTSLPNELGLLTQ 251

Query: 256 LEVLKVSKNRISIVPSTVGECSSLTEVDLSSNLLSELPETLGCLHNLKALHINHNGLRSL 315
           LE+LK + NRI+ +P ++G CS L EVDLS+N++SELPET   L NLK L +N+ GL++L
Sbjct: 252 LEILKANNNRITSLPESIGNCSFLMEVDLSANIISELPETFTKLRNLKTLELNNTGLKTL 311

Query: 316 PTTLFKMCIHLSTLDLHHTEITIDLLRQYEGWEAFDERRRSKHQKQLDFRVMSQAEFDEG 375
           P+ LFKMC+ LSTL LH+TEIT++ LRQ+EG++ FDERRR+KHQKQLDFRV+   +FDEG
Sbjct: 312 PSALFKMCLQLSTLGLHNTEITVEFLRQFEGYDDFDERRRTKHQKQLDFRVVGSGQFDEG 371

Query: 376 ADK 378
           ADK
Sbjct: 372 ADK 372

BLAST of CmaCh02G007290 vs. ExPASy Swiss-Prot
Match: Q7XDQ7 (Plant intracellular Ras-group-related LRR protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=IRL8 PE=2 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 1.3e-109
Identity = 208/362 (57.46%), Postives = 264/362 (72.93%), Query Frame = 0

Query: 16  SIAISVKFAGKSIRVTAPCDSTVKDLKSLLQPLTNVLPRGQKLIFKGKVLADEMTLAASE 75
           +I + VKF G++I V  P  +T  DLK LLQPLTNVLPRGQ+LI KGKVLAD  +L++ +
Sbjct: 11  TITVQVKFGGRTIPVEVPAAATAADLKRLLQPLTNVLPRGQRLICKGKVLADAASLSSMQ 70

Query: 76  INNGAKVMLMASQGLYQGDGPILLEART-RPRERSTPNAKNLVDEKKRVSVDKSRFERWK 135
           + NG+KVMLMASQGL+QGDGPI   +    P  R   N K    +K   +V K R ERWK
Sbjct: 71  VVNGSKVMLMASQGLHQGDGPITKNSSVPAPSTRRASNVKEAQIQKSDTNVSKIRPERWK 130

Query: 136 ATGVIALSDCNLKAIPDEVWSCEASARVIDLSNNSIKHVPSQVSCLSSTQKLLLNVNEIS 195
           ATG+IALSD +LKA+P+EVW C +S RV+D+SNN I+ +P +++ L S QKL+L  N+I+
Sbjct: 131 ATGIIALSDSSLKAVPEEVWGCGSSIRVLDVSNNCIEAIPQEIAALRSLQKLILTANDIA 190

Query: 196 DASISWDSLAFLKRLTVLSLSHNLLTTLPSALGSLTSLKQLHVTNNKLTSIPDEIRFLTQ 255
           D +ISW+ L  ++ LTVLSLS N L TLPS+LGS+T L++L + NN+L ++P EI  L  
Sbjct: 191 DGNISWEGLTCVQTLTVLSLSQNRLVTLPSSLGSITHLRELRIANNRLENLPVEIGLLKH 250

Query: 256 LEVLKVSKNRISIVPSTVGECSSLTEVDLSSNLLSELPETLGCLHNLKALHINHNGLRSL 315
           LE+L  + NRI+ +PS++G C SL EVDLSSNLL+ELPE  G L +LKAL + +NGL SL
Sbjct: 251 LEILIANNNRITSLPSSIGGCESLNEVDLSSNLLAELPEAFGNLQHLKALSVRNNGLTSL 310

Query: 316 PTTLFKMCIHLSTLDLHHTEITIDLLRQYEGWEAFDERRRSKHQKQLDFRVMSQAEFDEG 375
           P+  F  C  L TLDLH TEIT D+LRQ +GWE FDERRR KHQKQLDFRV S   FDEG
Sbjct: 311 PSAFFIKCSQLITLDLHGTEITNDVLRQVDGWEEFDERRRKKHQKQLDFRVGSSVVFDEG 370

Query: 376 AD 377
           AD
Sbjct: 371 AD 372

BLAST of CmaCh02G007290 vs. ExPASy Swiss-Prot
Match: B9F655 (Plant intracellular Ras-group-related LRR protein 7 OS=Oryza sativa subsp. japonica OX=39947 GN=IRL7 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.1e-41
Identity = 93/250 (37.20%), Postives = 149/250 (59.60%), Query Frame = 0

Query: 128 SRFERWKATGVIALSDCNLKAIPDEVWSCEASARVIDLSNNSIKHVPSQVSCLSSTQKLL 187
           SR  RW++TG++AL D  LK +P+EV     S R++DL+NN I  +P +V  L + Q+L+
Sbjct: 14  SRVTRWRSTGIVALRDARLKVVPNEVLQVGNSLRILDLTNNKIAEIPQEVGTLVNMQRLV 73

Query: 188 LNVNEISDASISWDSLAFLKRLTVLSLSHNLLTTLPSALGSLTSLKQLHVTNNKLTSIPD 247
           L  N +        ++ +L+ L +L+L  N ++ LP  LGSL++L+QL ++ N L+ +P 
Sbjct: 74  LAGNLVESIPA---NIGYLRNLKILTLDRNKISVLPEELGSLSNLQQLSISQNSLSRLPK 133

Query: 248 EIRFLTQLEVLKVSKNRISIVPSTVGECSSLTEVDLSSNLLSELPETLGCLHNLKALHIN 307
            +  L  + +L VS N++  +P ++G CSSL E+  + N + ++P ++  L  LK+L +N
Sbjct: 134 SVGDLRNMLLLNVSDNKLIALPESIGGCSSLEELQANGNSIEDVPSSICNLVCLKSLSLN 193

Query: 308 HNGLRSLPTTLFKMCIHLSTLDLHHTEITIDLLRQYEGWEAFDERRRSKHQKQLDFRV-M 367
            N +R LP  L K C  L  + LH   I++D  +Q +G+  F+ RRR K  KQ+D  V M
Sbjct: 194 GNKIRQLPQNLLKDCKALQNISLHDNPISMDQFQQMDGFTEFEARRRKKFDKQIDSNVMM 253

Query: 368 SQAEFDEGAD 377
           S    DEG D
Sbjct: 254 SSTALDEGID 260

BLAST of CmaCh02G007290 vs. ExPASy Swiss-Prot
Match: Q5FVI3 (Leucine-rich repeat-containing protein 57 OS=Rattus norvegicus OX=10116 GN=Lrrc57 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 7.7e-22
Identity = 76/236 (32.20%), Postives = 128/236 (54.24%), Query Frame = 0

Query: 127 KSRFERWKATGVIALSDCNLKAIPDEVWSCEASARVIDLSNNSIKHVPSQ-VSCLSSTQK 186
           ++  E  + TGV  L D  L   P E+    ++ R IDLSNN I  +P   +   +  + 
Sbjct: 7   RAHVETAQKTGVFQLKDRGLTEFPSELQKLTSNLRTIDLSNNKIDSLPPLIIGKFTLLKS 66

Query: 187 LLLNVNEISDASISWDSLAFLKRLTVLSLSHNLLTTLPSALGSLTSLKQLHVTNNKLTSI 246
           L LN N++   ++  D L  LK+L  LSL++N L  LPS+ G L++LK L ++ N+L ++
Sbjct: 67  LSLNNNKL---TVLPDELCNLKKLETLSLNNNHLRELPSSFGQLSALKTLSLSGNQLGAL 126

Query: 247 PDEIRFLTQLEVLKVSKNRISIVPSTVGECSSLTEVDLSSNLLSELPETLGCLHNLKALH 306
           P ++  L  L+V+ +SKN+I  +P TVGE  ++ E++L+ N +S++   + C   LK L 
Sbjct: 127 PPQLCSLRHLDVVDLSKNQIRSIPDTVGELQAI-ELNLNQNQISQISVRISCCPRLKVLR 186

Query: 307 INHN--GLRSLPTTLFKMCIHLSTLDLHHTEITIDLLRQYEGWEAFDERRRSKHQK 360
           +  N   L  LP ++      +  L +      I  LR+ EG++ + ER  +  +K
Sbjct: 187 LEENCLELSMLPQSILSDS-QICLLAVEGNLFEIKKLRELEGYDKYMERFTATKKK 237

BLAST of CmaCh02G007290 vs. ExPASy Swiss-Prot
Match: Q9D1G5 (Leucine-rich repeat-containing protein 57 OS=Mus musculus OX=10090 GN=Lrrc57 PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.7e-21
Identity = 76/236 (32.20%), Postives = 126/236 (53.39%), Query Frame = 0

Query: 127 KSRFERWKATGVIALSDCNLKAIPDEVWSCEASARVIDLSNNSIKHVPSQ-VSCLSSTQK 186
           ++  E  + TGV  L D  L   P E+    ++ R IDLSNN I  +P   +   +  + 
Sbjct: 7   RAHVETAQKTGVFQLKDRGLTEFPSELQKLTSNLRTIDLSNNKIDSLPPLIIGKFTLLKS 66

Query: 187 LLLNVNEISDASISWDSLAFLKRLTVLSLSHNLLTTLPSALGSLTSLKQLHVTNNKLTSI 246
           L LN N++   ++  D L  LK+L  LSL++N L  LPS  G L++LK L ++ N+L ++
Sbjct: 67  LSLNNNKL---TVLPDELCNLKKLETLSLNNNHLRELPSTFGQLSALKTLSLSGNQLGAL 126

Query: 247 PDEIRFLTQLEVLKVSKNRISIVPSTVGECSSLTEVDLSSNLLSELPETLGCLHNLKALH 306
           P ++  L  L+V+ +SKN+I  +P TVGE  ++ E++L+ N +S+L   + C   LK L 
Sbjct: 127 PPQLCCLRHLDVVDLSKNQIRSIPDTVGELQAI-ELNLNQNQISQLSVKISCCPRLKVLR 186

Query: 307 INHN--GLRSLPTTLFKMCIHLSTLDLHHTEITIDLLRQYEGWEAFDERRRSKHQK 360
           +  N   L  LP ++      +  L +      I   R+ EG++ + ER  +  +K
Sbjct: 187 LEENCLELSMLPQSILSDS-QICLLAVEGNLFEIKKFRELEGYDKYMERFTATKKK 237

BLAST of CmaCh02G007290 vs. TAIR 10
Match: AT2G30105.1 (CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G07910.1). )

HSP 1 Score: 433.3 bits (1113), Expect = 2.0e-121
Identity = 224/363 (61.71%), Postives = 285/363 (78.51%), Query Frame = 0

Query: 16  SIAISVKFAGKSIRVTAPCDSTVKDLKSLLQPLTNVLPRGQKLIFKGKVLADEMTLAASE 75
           +I ++VKF GKSI ++   D TVKDLKS LQP+TNVLPRGQKLIFKGKVL +  TL  S+
Sbjct: 5   TIKLTVKFGGKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSD 64

Query: 76  INNGAKVMLMASQGLYQGDGPILLEARTRPRERSTPNAKNLVDEKK-RVSVDKSRFERWK 135
           + +GAK+MLMASQGL+QG+GPIL EA  RP  R+  + K  VD++K  V VDK+R +RWK
Sbjct: 65  VGSGAKLMLMASQGLHQGEGPILKEASIRPISRTVVSDK--VDQRKPSVLVDKNRTDRWK 124

Query: 136 ATGVIALSDCNLKAIPDEVWSCEASARVIDLSNNSIKHVPSQVSCLSSTQKLLLNVNEIS 195
           ATGVIAL+  NLK IP+EVW C +  RV+D+S N IK VP+++S   S QKL L  N +S
Sbjct: 125 ATGVIALAQANLKEIPEEVWDCGSGVRVLDISENFIKEVPAKISSFGSMQKLFLQGNGLS 184

Query: 196 DASISWDSLAFLKRLTVLSLSHNLLTTLPSALGSLTSLKQLHVTNNKLTSIPDEIRFLTQ 255
           D SI W+ +A LKRL +LS+SHN LT LPSA+GSLTSL+QL VTNNKLTS+P+E+  LTQ
Sbjct: 185 DESIQWEGIASLKRLMLLSISHNNLTVLPSAMGSLTSLRQLDVTNNKLTSLPNELGLLTQ 244

Query: 256 LEVLKVSKNRISIVPSTVGECSSLTEVDLSSNLLSELPETLGCLHNLKALHINHNGLRSL 315
           LE+LK + NRI+ +P ++G CS L EVDLS+N++SELPET   L NLK L +N+ GL++L
Sbjct: 245 LEILKANNNRITSLPESIGNCSFLMEVDLSANIISELPETFTKLRNLKTLELNNTGLKTL 304

Query: 316 PTTLFKMCIHLSTLDLHHTEITIDLLRQYEGWEAFDERRRSKHQKQLDFRVMSQAEFDEG 375
           P+ LFKMC+ LSTL LH+TEIT++ LRQ+EG++ FDERRR+KHQKQLDFRV+   +FDEG
Sbjct: 305 PSALFKMCLQLSTLGLHNTEITVEFLRQFEGYDDFDERRRTKHQKQLDFRVVGSGQFDEG 364

Query: 376 ADK 378
           ADK
Sbjct: 365 ADK 365

BLAST of CmaCh02G007290 vs. TAIR 10
Match: AT5G07910.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 166.4 bits (420), Expect = 4.5e-41
Identity = 97/251 (38.65%), Postives = 146/251 (58.17%), Query Frame = 0

Query: 128 SRFERWKATGVIALSDCNLKAIPDEVWSCEASARVIDLSNNSIKHVPSQVSCLSSTQKLL 187
           +R  RW++TG++ L D  LK  PDEV   E + R +DL++N I  VP ++S L + Q+LL
Sbjct: 15  NRISRWRSTGIVGLRDSKLKTFPDEVIEMERAVRTLDLTHNKIADVPGEISKLINMQRLL 74

Query: 188 LNVNEISDASISWDSLAFLKRLTVLSLSHNLLTTLPSALGSLTSLKQLHVTNNKLTSIPD 247
           +  N +        +L  L+ L VL L  N ++ LP  LG L  L+QL ++ N L  +PD
Sbjct: 75  IADNLVERLP---GNLGKLQSLKVLMLDGNRISCLPDELGQLVRLEQLSISRNMLIYLPD 134

Query: 248 EIRFLTQLEVLKVSKNRISIVPSTVGECSSLTEVDLSSNLLSELPETLGCLHNLKALHIN 307
            I  L  L +L VS NR+  +P +VG C+SL EV  + N++ ELP +L  L  LK+L ++
Sbjct: 135 TIGSLRNLLLLNVSNNRLKSLPESVGSCASLEEVQANDNVVEELPASLCNLIQLKSLSLD 194

Query: 308 HNGLRSLPTTLFKMCIHLSTLDLHHTEITIDLLRQYEGWEAFDERRRSKHQKQLDFRVMS 367
           +N +  +P  L   C  L  L LH+  I++D  +  EG++ F+ERR+ K  KQ+D  VM 
Sbjct: 195 NNQVNQIPDGLLIHCKSLQNLSLHNNPISMDQFQLMEGYQDFEERRKKKFDKQIDSNVMM 254

Query: 368 QAE-FDEGADK 378
            ++  D G DK
Sbjct: 255 GSKALDVGVDK 262

BLAST of CmaCh02G007290 vs. TAIR 10
Match: AT2G17440.1 (plant intracellular ras group-related LRR 5 )

HSP 1 Score: 98.2 bits (243), Expect = 1.5e-20
Identity = 82/280 (29.29%), Postives = 143/280 (51.07%), Query Frame = 0

Query: 64  VLADEMTLAASEINNGAKVMLMASQGLYQGDGPILLEARTRPRERSTPNAKNLV-DEKKR 123
           V +DE+   + EI +     +  ++  +  DG +L  ++ +  + +   AKN+  ++ ++
Sbjct: 130 VSSDEIPFKSKEIISRDDTFVKKAKSSFYSDG-LLAPSKPQVLDSTLHQAKNVAGNDGEK 189

Query: 124 VSVDK----SRFERWKATGVIALSD---CNLKAIPDEVWSCEASARVIDLSNNSIKHVPS 183
           +S+ K          KAT  + L       L+ +PD +    +  R +DLS N I  +P+
Sbjct: 190 LSLIKLASLIEVSAKKATQELNLQHRLMDQLEWLPDSLGKLSSLVR-LDLSENCIMVLPA 249

Query: 184 QVSCLSSTQKLLLNVNEISDASISWDSLAFLKRLTVLSLSHNLLTTLPSALGSLTSLKQL 243
            +  L S  +L L+ N I       +S+  L  L  L+LS N L++LPS+   L  L++L
Sbjct: 250 TIGGLISLTRLDLHSNRIGQLP---ESIGDLLNLVNLNLSGNQLSSLPSSFNRLIHLEEL 309

Query: 244 HVTNNKLTSIPDEIRFLTQLEVLKVSKNRISIVPSTVGECSSLTEVDLSSNLLSELPETL 303
            +++N L+ +P+ I  L  L+ L V  N I  +P ++  CSS+ E+    N L  LPE +
Sbjct: 310 DLSSNSLSILPESIGSLVSLKKLDVETNNIEEIPHSISGCSSMEELRADYNRLKALPEAV 369

Query: 304 GCLHNLKALHINHNGLRSLPTTLFKMCIHLSTLDLHHTEI 336
           G L  L+ L + +N +R LPTT+  M  +L  LD+   E+
Sbjct: 370 GKLSTLEILTVRYNNIRQLPTTMSSMA-NLKELDVSFNEL 403

BLAST of CmaCh02G007290 vs. TAIR 10
Match: AT4G35470.1 (plant intracellular ras group-related LRR 4 )

HSP 1 Score: 96.7 bits (239), Expect = 4.3e-20
Identity = 67/190 (35.26%), Postives = 102/190 (53.68%), Query Frame = 0

Query: 146 LKAIPDEVWSCEASARVIDLSNNSIKHVPSQVSCLSSTQKLLLNVNEISDASISWDSLAF 205
           L+ +PD +    +S   +DLS N I  +P+ +  LSS  KL L+ N I       +S+  
Sbjct: 235 LEWLPDSLGKL-SSLTSLDLSENHIVVLPNTIGGLSSLTKLDLHSNRIGQLP---ESIGE 294

Query: 206 LKRLTVLSLSHNLLTTLPSALGSLTSLKQLHVTNNKLTSIPDEIRFLTQLEVLKVSKNRI 265
           L  L  L+L  N L++LPSA   L  L++L ++ N L  +P+ I  L  L+ L V  N I
Sbjct: 295 LLNLVYLNLGSNQLSSLPSAFSRLVRLEELDLSCNNLPILPESIGSLVSLKKLDVETNDI 354

Query: 266 SIVPSTVGECSSLTEVDLSSNLLSELPETLGCLHNLKALHINHNGLRSLPTTLFKMCIHL 325
             +P ++G CSSL E+    N L  LPE +G +  L+ L + +N +R LPTT+  +   L
Sbjct: 355 EEIPYSIGGCSSLIELRADYNKLKALPEAIGKITTLEILSVRYNNIRQLPTTMSSLA-SL 414

Query: 326 STLDLHHTEI 336
             LD+   E+
Sbjct: 415 KELDVSFNEL 419

BLAST of CmaCh02G007290 vs. TAIR 10
Match: AT4G26050.1 (plant intracellular ras group-related LRR 8 )

HSP 1 Score: 92.4 bits (228), Expect = 8.2e-19
Identity = 60/178 (33.71%), Postives = 105/178 (58.99%), Query Frame = 0

Query: 141 LSDCNLKAIPDEVWSCEASARVIDLSNNSIKHVPSQVSCLSSTQKLLLNVNEISDASISW 200
           L    LK +P+ +  C +  + +++S N ++ +P  +    S ++L  N NE++      
Sbjct: 111 LQSNQLKTLPNSI-GCLSKLKFLNVSGNYLQSLPKTIEDCRSLEELNANFNELTRLP--- 170

Query: 201 DSLAF-LKRLTVLSLSHNLLTTLPSALGSLTSLKQLHVTNNKLTSIPDEIRFLTQLEVLK 260
           D++ F L  LT LS++ N L  LP+++  LTSL+ L    N+L+S+P+++  L  L+VL 
Sbjct: 171 DAIGFELTNLTKLSVNSNKLVLLPNSVSYLTSLRVLDARLNRLSSLPEDLENLVNLQVLN 230

Query: 261 VSKN--RISIVPSTVGECSSLTEVDLSSNLLSELPETLGCLHNLKALHINHNGLRSLP 316
           VS+N   ++ +P +VG   SL E+D+S N ++ LP++LGCL  ++ L +  N L S P
Sbjct: 231 VSQNFQHLTTLPYSVGLLISLVELDVSYNGITVLPDSLGCLRRIQKLSVEGNPLISPP 284

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P0C8952.8e-12061.71LRR repeats and ubiquitin-like domain-containing protein At2g30105 OS=Arabidopsi... [more]
Q7XDQ71.3e-10957.46Plant intracellular Ras-group-related LRR protein 8 OS=Oryza sativa subsp. japon... [more]
B9F6551.1e-4137.20Plant intracellular Ras-group-related LRR protein 7 OS=Oryza sativa subsp. japon... [more]
Q5FVI37.7e-2232.20Leucine-rich repeat-containing protein 57 OS=Rattus norvegicus OX=10116 GN=Lrrc5... [more]
Q9D1G51.7e-2132.20Leucine-rich repeat-containing protein 57 OS=Mus musculus OX=10090 GN=Lrrc57 PE=... [more]
Match NameE-valueIdentityDescription
AT2G30105.12.0e-12161.71CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR00... [more]
AT5G07910.14.5e-4138.65Leucine-rich repeat (LRR) family protein [more]
AT2G17440.11.5e-2029.29plant intracellular ras group-related LRR 5 [more]
AT4G35470.14.3e-2035.26plant intracellular ras group-related LRR 4 [more]
AT4G26050.18.2e-1933.71plant intracellular ras group-related LRR 8 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 252..275
e-value: 0.56
score: 19.2
coord: 229..251
e-value: 1.1
score: 18.3
coord: 161..180
e-value: 250.0
score: 1.9
coord: 276..297
e-value: 38.0
score: 8.5
coord: 206..228
e-value: 0.44
score: 19.6
coord: 298..321
e-value: 0.046
score: 22.9
IPR000626Ubiquitin-like domainSMARTSM00213ubq_7coord: 17..87
e-value: 1.8E-13
score: 60.8
IPR000626Ubiquitin-like domainPFAMPF00240ubiquitincoord: 19..88
e-value: 1.5E-14
score: 53.5
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 17..88
score: 15.38353
NoneNo IPR availableSMARTSM00364LRR_bac_2coord: 252..271
e-value: 86.0
score: 6.6
coord: 206..225
e-value: 32.0
score: 9.8
coord: 275..294
e-value: 27.0
score: 10.4
coord: 229..248
e-value: 5.9
score: 15.4
coord: 298..317
e-value: 11.0
score: 13.4
NoneNo IPR availableGENE3D3.10.20.90coord: 11..90
e-value: 1.0E-21
score: 78.7
NoneNo IPR availablePANTHERPTHR45752:SF70PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 8coord: 83..345
NoneNo IPR availablePANTHERPTHR45752LEUCINE-RICH REPEAT-CONTAININGcoord: 83..345
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 130..337
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 231..288
e-value: 1.1E-8
score: 34.7
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 208..230
score: 7.473233
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 231..252
score: 7.504036
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 277..298
score: 7.080498
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 107..348
e-value: 1.2E-48
score: 167.3
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 11..87

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh02G007290.1CmaCh02G007290.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding