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CmaCh02G007290 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAGAGGATTAATTAATTATTAGTTGCTTGACCAACTGATCATCGTCTTAGTTCTCAAGGTTACCGACGCGCCTCTGGTGCGGCGCCAAATTGAAATGGAGCTCGGAGCGATGGCGACTACCTCCGAAGGTAATGCCAAGTCCATAGCTATCAGCGTCAAGTTCGCCGGGAAGTCAATACGTGTTACTGCTCCCTGTGATTCGACCGTCAAGGATCTGAAGTCCCTTCTTCAACCTTTAACCAACGTCCTACCTCGCGGCCAGAAGCTCATTTTCAAAGGTTTTGGATTCGAATTTTTGTGGAAGGAATTTGTCTGAGAGAGGTGGATTTGAATTTTTGAAGTTCGTGATATGTGATTACAGGGAAGGTTTTGGCAGACGAGATGACTTTGGCGGCGTCGGAGATCAATAATGGAGCGAAAGTGATGCTTATGGCTTCTCAGGGATTGTATCAAGGGGTAGTTGGTTTTTCCATTCGTTCTTTTTTTTCAATTGAAGTCTTCTTTCTTACATCTTGAATTTTATTTTGCTAAATCTACATTGTGATCTTCCGAGTGGATCAAATTGAGGGTTTTACATGTCATGTATCTCGTTTATTGAAGTCTTAGGGTTAAATTGTTAAAACTGCGAGAATTGGTCCCAAGGACGACTTATCTGTTAAACATTGTGGACTATATGTTGGCGAAATGTTAAGGGAATGCATATTGTTATATGTTTTCATTCTTTGGATTTGACTGAATAGGATGGCCCTATCCTGCTCGAAGCGAGGACTCGTCCCAGAGAAAGGAGCACGCCAAATGCGAAGAATTTGGTTGATGAAAAGAAGCGTGTCTCCGTAGATAAAAGCCGGTTTGAAAGATGGAAGGCCACTGGAGTGATAGCATTATCTGACTGCAATTTGAAGGTATAGAAGAAACCATCGCTTTCACAGAACAAAATAAAACTGTGATTGTTTCTCTCAAATCTTCATTGGAATCTCCCATAGGCAATTCCCGATGAAGTGTGGTCTTGTGAAGCTTCAGCGAGAGTAATTGATTTGAGCAACAACTCTATTAAGCATGTTCCTTCTCAAGTTAGCTGCCTAAGTTCAACGCAGGTGAAGTTAATTGCTGTCTTCCTTTTCACCTTTTCATTTGAGTGGTTTAAATTCCTCTTCGTAAGATCTCTCCAATTTTATCACGATCTGCAGAAATTATTACTGAATGTTAATGAGATATCCGATGCATCTATAAGTTGGGACAGTTTAGCGTTTTTGAAGCGTCTAACAGTTTTATCTCTGTCCCATAATCTGTAAGTAGCTTCAGTTGTTTCAAGGATTAGTCACAATCTAATTTTTGCAATATCAGAATACAAAAGTCTTAAGTGACTATATTATGTCATCCGGTACCCATAAACATCAAACAAGGCTGGTTGATGCAGGTTAACTACTTTGCCTTCTGCACTTGGCAGCCTGACTTCACTAAAGCAACTGCATGTGACTAATAACAAATTGACGAGTATCCCAGATGAAATAAGATTTTTGACCCAACTTGAAGTTTTGAAAGTCAGCAAAAATAGGTAATGCTGAGTGGCATATGCTCACACAAATTGCTCATCAGTAAAACGCTCAACCGTGGTGAAGATATTCTTTACTAAATAATTTACTTACACTTTTATTTTTTGTGGTGTAGATAGTTCAACATTCCCTAGTTTATTTAATGTGAATTAATTTTTTCGTCGTTTTCTATTACTAATGCCTCTCACCATACATGGGGCAGGATAAGCATTGTTCCTTCAACTGTGGGGGAATGTAGTTCTCTTACTGAGGTACAACTTACCAAACTTATTTTTAGAAGAACTTTTCTTCTCTTTTTATTAATCTTAGAAATATTGATTCCCATAATTGTCTCCCTCACCTAAAGTTCTATCGACATGCTTGGCTATGGTACAGGTGGATTTGTCATCAAATCTTCTGTCAGAGTTGCCAGAGACACTTGGTTGTCTGCACAATTTGAAGGTTCCTACTTAATTCTCTATCCAGATCATTTACTTTCTTCGTATGTTTCATTCTAATCTCAATAGTGGAAATTAAGGGACGTAATGCAGATACATGAAATAGAGGCACATTTCTTTTACGGTTCATTAGGAGCCGTAATTAATTACGTTGTTGCTGTTAGGGGCAAATCTTTGTGGGTACCAATACCATACATGACATTTCTTGTCTTTCTTTTCACTCTCTTTATTTGCTTACTGACAATTCATTTAAGTAGAGCGTATACTTGCATCTTTTTAGTATCTAGTTTCTATTATTATTTCAACCTAAGAATTCTAGATTCTGTTTTCCAGTTAATTTTGAAGTAGTTCATTGTTATTAGATTCAGGGAAGTAATCCATCTATTTTTCCAAATGTATGATAATTATTTTTGGAAGTAAACGAAGTACGATAACCTGAAAGCCACCCTATCTTGGTCAATACTAAATTTACCAGCACCAATTTTACAACAAAAAGAATCCTCTCGGTAGGGAATCTCTGCGACCACTTGACTATAATTGTAATACTCCTATTTTCTGTAACTGTGACGTCAAGTGAACCCTTAGCTAAAAAAGGTTACTTTTTTCCAGTTAACAAGTCCGAGAAGTAGTAAGCAGAACTGGTTTGACACACTTAATCTGAGTAATTGACCCTTCTTGATTGGCATGTTCCCTACAAGCAAGCATATATGAGAACTTCTTAAGAACGGAATTGCAATTGTTTAGATTTCAGATTCCTTAAAAGAAAACGTGTAGTGAAGAAGCCACTCCCCTGCAGTCTGTCTCACCTGCACCAAAGAAATCCATTATCCACCACTCCTAACCTCTATTTCAGAGTGGCTAATGGCAACAATAATAGATTTAATTGGCAAGTCTCTTTCAGAAAATACCCAAACTCTTTTGAAGAGGTTCTCAATCCTGCCAAAATTGGTCGCAAGGAAGAGGAGTGTCATTGGTAAAGTACAGAGGGCTAGCATGAATAAAACTGTACCAACTTTCAAACCTTCCACAGATCAAGATCTATTCCGACTAATAGCTTGTATGAATCACTGCCAGGAAAAATAAGAACGGATGGAGAAGGTAAACTTTGATGAATACCCTTGAAGCTAAAATCTTACTCGCTGGTCTTACATTGAGCAGAGTGGAAATTTCGTGTCAGAAACTCTCCTCATATCTCCAAAACCCTTTGCTCCTAGGACTGAAAGAAGAAAATATCACTCGGTGTCCAATTCCAAGCTGACCCAAGTTCTAGCTTGCAAAGTAGCCTTTTTTCCGTTTCCTCCAATCCTCAAGAGTTCTAAATTCTAATTGCTTCCGTTTTCCTTTTTTCCACAAAAGCAACCTTGCAAGGTGAAATTATATGCGTACATAAGGCTTCAAACAATCTCCAAGAACCTCAGCAACAGCCTGATACAAATAAGTAGATAGGTGTTTAGAATGAGACGCAAGTTTCCCTAGAGCTTGCTCCCAACCTTGAAACCTTGACTAATTTCACAGTATTAACCTCCTGACTTACAAATATGGCATTAGAAAAACCATATGATATATAATATCCTATATATGTGGCTATCATAATTTGAATTGCGACTCCAAAAGAACATATAAGGTTGAAAACTGTTGCTTTTATTATTAAGTCAATCTATGATGATTTTTCGTAATAGCCTTTCGAACTTCTTTATTAAAGGACATTCCAAATGAGCTACATGTAACCAAAAATACTTATTGTCGATTCATCTTTAGCCTCAAACTTAAGCTATTGGTTGAGGTAATTTTAATCATTTAACATGTCATCAAGTTTTGTTCTTTACAGGTGTTTGTTTTACATTTTATTATAATGATTCTTCATATGTGATAATGATTTCTCTTATCTGAACAGTTTTTATGAAGATAAGTGGTAACTATCTTAACAAGTTGTTCCAATATATATTCTGCGACGTGTAGAGAAACATACTCAACACACACAGCCTCATATTATGGTTCTTTTTATTATTTAGACTACGCATAACCTTAGCTCCTAATTCCATGCACATTCGTATTCCCATATAGCGGTACTCAACTGACTCCCAAGTCCCAACATATGTAAATTGAGCTGGGTGTGTGGCTTTTAAGAACTTCAATAGGAGATTCCTGTCTTAATTATTTTGCCATGTACTGCAGGCTTTGCATATCAATCATAACGGCCTAAGGTCCCTCCCTACTACACTATTTAAGATGTGCATCCACCTCTCTACACTTGATCTCCACCACACAGAAATCACCATAGATCTCCTCCGGCAGGTGTGTCCTCATGCTGCAATTGTTTGGATCAATCTATGCCTGCTTGATTAATTTGACCATCTTTTGTGATAGTATGAAGGATGGGAAGCTTTTGATGAACGTCGGCGTTCAAAGCATCAGAAGCAACTAGATTTTCGCGTTATGAGCCAGGCTGAATTTGATGAAGGTGCAGATAAACATTGATGCTTTATGATTTATTGCTTTTAAAGTCAACATGCAGCAACTGTCTCGTTTTTTCTGTAAAATACATTTGGTTAAATTAATGCGACATTGGTCCTGCCAGAACCAGAAAATTTCAGGCTTACATTAGCTTCATGTTAGATTATGGAAATCGTTGGGGGTGAATTTAGGTAATCATCTCTTGGCTTGGCTAATTGTCAAAATATTTGAGATGTATTGTCCGAATGTCCCTTTTTCATTTCCTTCCTGCGAGTGCGAGGTGTGGAGATAGGGACAGATGATTCCAATGGAGCCATTCACGTCTTCTAAAGCTCTCACTTAATCAATTTAAGAACAGGAGAATCTTCAA GGAGAGGATTAATTAATTATTAGTTGCTTGACCAACTGATCATCGTCTTAGTTCTCAAGGTTACCGACGCGCCTCTGGTGCGGCGCCAAATTGAAATGGAGCTCGGAGCGATGGCGACTACCTCCGAAGGTAATGCCAAGTCCATAGCTATCAGCGTCAAGTTCGCCGGGAAGTCAATACGTGTTACTGCTCCCTGTGATTCGACCGTCAAGGATCTGAAGTCCCTTCTTCAACCTTTAACCAACGTCCTACCTCGCGGCCAGAAGCTCATTTTCAAAGGGAAGGTTTTGGCAGACGAGATGACTTTGGCGGCGTCGGAGATCAATAATGGAGCGAAAGTGATGCTTATGGCTTCTCAGGGATTGTATCAAGGGGATGGCCCTATCCTGCTCGAAGCGAGGACTCGTCCCAGAGAAAGGAGCACGCCAAATGCGAAGAATTTGGTTGATGAAAAGAAGCGTGTCTCCGTAGATAAAAGCCGGTTTGAAAGATGGAAGGCCACTGGAGTGATAGCATTATCTGACTGCAATTTGAAGGCAATTCCCGATGAAGTGTGGTCTTGTGAAGCTTCAGCGAGAGTAATTGATTTGAGCAACAACTCTATTAAGCATGTTCCTTCTCAAGTTAGCTGCCTAAGTTCAACGCAGAAATTATTACTGAATGTTAATGAGATATCCGATGCATCTATAAGTTGGGACAGTTTAGCGTTTTTGAAGCGTCTAACAGTTTTATCTCTGTCCCATAATCTGTTAACTACTTTGCCTTCTGCACTTGGCAGCCTGACTTCACTAAAGCAACTGCATGTGACTAATAACAAATTGACGAGTATCCCAGATGAAATAAGATTTTTGACCCAACTTGAAGTTTTGAAAGTCAGCAAAAATAGGATAAGCATTGTTCCTTCAACTGTGGGGGAATGTAGTTCTCTTACTGAGGTGGATTTGTCATCAAATCTTCTGTCAGAGTTGCCAGAGACACTTGGTTGTCTGCACAATTTGAAGGCTTTGCATATCAATCATAACGGCCTAAGGTCCCTCCCTACTACACTATTTAAGATGTGCATCCACCTCTCTACACTTGATCTCCACCACACAGAAATCACCATAGATCTCCTCCGGCAGTATGAAGGATGGGAAGCTTTTGATGAACGTCGGCGTTCAAAGCATCAGAAGCAACTAGATTTTCGCGTTATGAGCCAGGCTGAATTTGATGAAGGTGCAGATAAACATTGATGCTTTATGATTTATTGCTTTTAAAGTCAACATGCAGCAACTGTCTCGTTTTTTCTGTAAAATACATTTGGTTAAATTAATGCGACATTGGTCCTGCCAGAACCAGAAAATTTCAGGCTTACATTAGCTTCATGTTAGATTATGGAAATCGTTGGGGGTGAATTTAGGTAATCATCTCTTGGCTTGGCTAATTGTCAAAATATTTGAGATGTATTGTCCGAATGTCCCTTTTTCATTTCCTTCCTGCGAGTGCGAGGTGTGGAGATAGGGACAGATGATTCCAATGGAGCCATTCACGTCTTCTAAAGCTCTCACTTAATCAATTTAAGAACAGGAGAATCTTCAA ATGGAGCTCGGAGCGATGGCGACTACCTCCGAAGGTAATGCCAAGTCCATAGCTATCAGCGTCAAGTTCGCCGGGAAGTCAATACGTGTTACTGCTCCCTGTGATTCGACCGTCAAGGATCTGAAGTCCCTTCTTCAACCTTTAACCAACGTCCTACCTCGCGGCCAGAAGCTCATTTTCAAAGGGAAGGTTTTGGCAGACGAGATGACTTTGGCGGCGTCGGAGATCAATAATGGAGCGAAAGTGATGCTTATGGCTTCTCAGGGATTGTATCAAGGGGATGGCCCTATCCTGCTCGAAGCGAGGACTCGTCCCAGAGAAAGGAGCACGCCAAATGCGAAGAATTTGGTTGATGAAAAGAAGCGTGTCTCCGTAGATAAAAGCCGGTTTGAAAGATGGAAGGCCACTGGAGTGATAGCATTATCTGACTGCAATTTGAAGGCAATTCCCGATGAAGTGTGGTCTTGTGAAGCTTCAGCGAGAGTAATTGATTTGAGCAACAACTCTATTAAGCATGTTCCTTCTCAAGTTAGCTGCCTAAGTTCAACGCAGAAATTATTACTGAATGTTAATGAGATATCCGATGCATCTATAAGTTGGGACAGTTTAGCGTTTTTGAAGCGTCTAACAGTTTTATCTCTGTCCCATAATCTGTTAACTACTTTGCCTTCTGCACTTGGCAGCCTGACTTCACTAAAGCAACTGCATGTGACTAATAACAAATTGACGAGTATCCCAGATGAAATAAGATTTTTGACCCAACTTGAAGTTTTGAAAGTCAGCAAAAATAGGATAAGCATTGTTCCTTCAACTGTGGGGGAATGTAGTTCTCTTACTGAGGTGGATTTGTCATCAAATCTTCTGTCAGAGTTGCCAGAGACACTTGGTTGTCTGCACAATTTGAAGGCTTTGCATATCAATCATAACGGCCTAAGGTCCCTCCCTACTACACTATTTAAGATGTGCATCCACCTCTCTACACTTGATCTCCACCACACAGAAATCACCATAGATCTCCTCCGGCAGTATGAAGGATGGGAAGCTTTTGATGAACGTCGGCGTTCAAAGCATCAGAAGCAACTAGATTTTCGCGTTATGAGCCAGGCTGAATTTGATGAAGGTGCAGATAAACATTGA MELGAMATTSEGNAKSIAISVKFAGKSIRVTAPCDSTVKDLKSLLQPLTNVLPRGQKLIFKGKVLADEMTLAASEINNGAKVMLMASQGLYQGDGPILLEARTRPRERSTPNAKNLVDEKKRVSVDKSRFERWKATGVIALSDCNLKAIPDEVWSCEASARVIDLSNNSIKHVPSQVSCLSSTQKLLLNVNEISDASISWDSLAFLKRLTVLSLSHNLLTTLPSALGSLTSLKQLHVTNNKLTSIPDEIRFLTQLEVLKVSKNRISIVPSTVGECSSLTEVDLSSNLLSELPETLGCLHNLKALHINHNGLRSLPTTLFKMCIHLSTLDLHHTEITIDLLRQYEGWEAFDERRRSKHQKQLDFRVMSQAEFDEGADKH Homology
BLAST of CmaCh02G007290 vs. ExPASy Swiss-Prot
Match: P0C895 (LRR repeats and ubiquitin-like domain-containing protein At2g30105 OS=Arabidopsis thaliana OX=3702 GN=At2g30105 PE=1 SV=1) HSP 1 Score: 433.3 bits (1113), Expect = 2.8e-120 Identity = 224/363 (61.71%), Postives = 285/363 (78.51%), Query Frame = 0
BLAST of CmaCh02G007290 vs. ExPASy Swiss-Prot
Match: Q7XDQ7 (Plant intracellular Ras-group-related LRR protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=IRL8 PE=2 SV=1) HSP 1 Score: 397.9 bits (1021), Expect = 1.3e-109 Identity = 208/362 (57.46%), Postives = 264/362 (72.93%), Query Frame = 0
BLAST of CmaCh02G007290 vs. ExPASy Swiss-Prot
Match: B9F655 (Plant intracellular Ras-group-related LRR protein 7 OS=Oryza sativa subsp. japonica OX=39947 GN=IRL7 PE=2 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 1.1e-41 Identity = 93/250 (37.20%), Postives = 149/250 (59.60%), Query Frame = 0
BLAST of CmaCh02G007290 vs. ExPASy Swiss-Prot
Match: Q5FVI3 (Leucine-rich repeat-containing protein 57 OS=Rattus norvegicus OX=10116 GN=Lrrc57 PE=2 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 7.7e-22 Identity = 76/236 (32.20%), Postives = 128/236 (54.24%), Query Frame = 0
BLAST of CmaCh02G007290 vs. ExPASy Swiss-Prot
Match: Q9D1G5 (Leucine-rich repeat-containing protein 57 OS=Mus musculus OX=10090 GN=Lrrc57 PE=1 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.7e-21 Identity = 76/236 (32.20%), Postives = 126/236 (53.39%), Query Frame = 0
BLAST of CmaCh02G007290 vs. TAIR 10
Match: AT2G30105.1 (CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G07910.1). ) HSP 1 Score: 433.3 bits (1113), Expect = 2.0e-121 Identity = 224/363 (61.71%), Postives = 285/363 (78.51%), Query Frame = 0
BLAST of CmaCh02G007290 vs. TAIR 10
Match: AT5G07910.1 (Leucine-rich repeat (LRR) family protein ) HSP 1 Score: 166.4 bits (420), Expect = 4.5e-41 Identity = 97/251 (38.65%), Postives = 146/251 (58.17%), Query Frame = 0
BLAST of CmaCh02G007290 vs. TAIR 10
Match: AT2G17440.1 (plant intracellular ras group-related LRR 5 ) HSP 1 Score: 98.2 bits (243), Expect = 1.5e-20 Identity = 82/280 (29.29%), Postives = 143/280 (51.07%), Query Frame = 0
BLAST of CmaCh02G007290 vs. TAIR 10
Match: AT4G35470.1 (plant intracellular ras group-related LRR 4 ) HSP 1 Score: 96.7 bits (239), Expect = 4.3e-20 Identity = 67/190 (35.26%), Postives = 102/190 (53.68%), Query Frame = 0
BLAST of CmaCh02G007290 vs. TAIR 10
Match: AT4G26050.1 (plant intracellular ras group-related LRR 8 ) HSP 1 Score: 92.4 bits (228), Expect = 8.2e-19 Identity = 60/178 (33.71%), Postives = 105/178 (58.99%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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