CmaCh02G007210 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh02G007210
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionN-terminal acetyltransferase B complex auxiliary subunit NAA25
LocationCma_Chr02: 4357283 .. 4358803 (+)
RNA-Seq ExpressionCmaCh02G007210
SyntenyCmaCh02G007210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAGCGAGTCACACTGTAGGAATTTTTTTCGATCGGCGCCACTGGAACACTCGGCTTCCAAAAGCTCAGCTCAAAATAGGTTTGCCACCAACCATCACTTACTTGATTCTCCCTTAAATTTCAACTCAATCGACGAAACGGTTGCTCATAGAATCTCCAATTTGCGTAGTGAATCATCGCATTCACGTCTTGTCAACTTCTTTCGAGGAGCTTCAATGGCGTCCAACTTCGGTTTGGCCGAAGGGTTATCGGAGCACCGAGTGCGCCCGATATGTTGCGCCATCGATTCGAGACAGTTCAAGAATGCCGTCCTGAACTCCGCAAATTTGAGTTTGAATCTCACTTTTCAACTTCCTCTTTCAAAAATCCTAGCCCCTCTTTTCTTTTCCTTTTTCTAAGAACGCCTGTAACTTAATAGCCTCGGTGTTAATAGAAAGGCTAAATTGGGTAAGAAGGAGTAGCCTCGATGCTATAGAAAGGCTAAATTGGGTAAGAAGGGTTGAAGGCGTCACGACGGCCGCCGATAGTAGTAGCTTTAACAACAGGGTTGAAAGTGTGAGTGTAATTGAGACAAGAAATCCGAGTACAACCTTTGGCAATAAGATGAGTCTTGAAATACTAAACAGATCCATCGAGCAAATATTTAGTGTTAAACACCCATTTAGAGTCTACGATATTGGTGTCGCACGGGCAAAAAACCAAAATCTAAGTGTCTGTTTGTTGTAAAGCTCGAATTTCCTCATCCATGGCAGCAATCCACACACGACTTTTAATAGTAGATTTGAATTCTCTTGGCTCATCGAATCCAAGAAGAGCAAAAAGAAGTCCAAATGAGCCAAAAAAATAAAAAATTGTTGGATGACGAGTTTTGAAAATATCAACTTTTGCTCGTGTGATCATAGGATCAGAGCCCAAGGAAGAAGAGGAATTAGCAGCAAGTTCTATAGAGGGTGAATTAGAAGCTGAGGGTGGCAAAGAGCAACCTGCAAGAGAAGTATCAATTTGCACATACTCATCCACAAGGTCATAACAAATATCACATGGAGAGGAGCTAGATCAAGGAATGTGTAGTGTAGAAGGGGTAGGGGGATCGATATGGTAAAGACACGGCTCCAAGAAATTTGAAATATAAAAAGAGGAAAGAGACCTAGGGACAGCAGGAAAATGAGCTTCATCGAATTGAATGTGACCGGTGATATATTCTCAGTGGTGGTTGGATCAAGACAACAAAACCTTTTATGCATTTGAAACAATATAAGTTTCATTTTACCTTAACCCAGACACCTTCCTGTCCACCTTGATGCATTTGAACTTTTCGTCCAACAGAATCTGCTACATGTAAGTCATAACATCTCATTGATTATTGTATATTATATTTTGAGATTTTATGACCTTACCGTCTATAGTCGATACCCCTCTCATTTTCTATAGTCGATACCTCTTTTAGTTTATACTCGATAACTTCTCTGTCATCGATTTTTGTAGTTGTTGTAGGTACCTTGATCTCAACTATATAA

mRNA sequence

ATGGATAGCGAGTCACACTGTAGGAATTTTTTTCGATCGGCGCCACTGGAACACTCGGCTTCCAAAAGCTCAGCTCAAAATAGGTTTGCCACCAACCATCACTTACTTGATTCTCCCTTAAATTTCAACTCAATCGACGAAACGGTTGCTCATAGAATCTCCAATTTGCGTAGTGAATCATCGCATTCACGTCTTGTCAACTTCTTTCGAGGAGCTTCAATGGCGTCCAACTTCGGTTTGGCCGAAGGGTTATCGGAGCACCGAGTGCGCCCGATATGTTGCGCCATCGATTCGAGACAGTTCAAGAATGCCGTCCTGAACTCCGCAAATTTGAGTACCTTGATCTCAACTATATAA

Coding sequence (CDS)

ATGGATAGCGAGTCACACTGTAGGAATTTTTTTCGATCGGCGCCACTGGAACACTCGGCTTCCAAAAGCTCAGCTCAAAATAGGTTTGCCACCAACCATCACTTACTTGATTCTCCCTTAAATTTCAACTCAATCGACGAAACGGTTGCTCATAGAATCTCCAATTTGCGTAGTGAATCATCGCATTCACGTCTTGTCAACTTCTTTCGAGGAGCTTCAATGGCGTCCAACTTCGGTTTGGCCGAAGGGTTATCGGAGCACCGAGTGCGCCCGATATGTTGCGCCATCGATTCGAGACAGTTCAAGAATGCCGTCCTGAACTCCGCAAATTTGAGTACCTTGATCTCAACTATATAA

Protein sequence

MDSESHCRNFFRSAPLEHSASKSSAQNRFATNHHLLDSPLNFNSIDETVAHRISNLRSESSHSRLVNFFRGASMASNFGLAEGLSEHRVRPICCAIDSRQFKNAVLNSANLSTLISTI
Homology
[Close]
BLAST of CmaCh02G007210 vs. ExPASy Swiss-Prot
Match: F4KEY9 (N-terminal acetyltransferase B complex auxiliary subunit NAA25 OS=Arabidopsis thaliana OX=3702 GN=NAA25 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 3.5e-05
Identity = 24/37 (64.86%), Postives = 28/37 (75.68%), Query Frame = 0 

Query: 69  FRGASMASNFGLAEGLSEHRVRPICCAIDSRQFKNAV 106
           F  + M+S FGLA G+ E RVRPI  AIDSRQFKNA+
Sbjct: 59  FLSSQMSSKFGLAGGIPERRVRPIWDAIDSRQFKNAL 95

[Close]
BLAST of CmaCh02G007210 vs. TAIR 10
Match: AT5G58450.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 49.3 bits (116), Expect = 2.5e-06
Identity = 24/37 (64.86%), Postives = 28/37 (75.68%), Query Frame = 0 

Query: 69  FRGASMASNFGLAEGLSEHRVRPICCAIDSRQFKNAV 106
           F  + M+S FGLA G+ E RVRPI  AIDSRQFKNA+
Sbjct: 59  FLSSQMSSKFGLAGGIPERRVRPIWDAIDSRQFKNAL 95

The following BLAST results are available for this feature:
BLAST of CmaCh02G007210 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
F4KEY93.5e-0564.86N-terminal acetyltransferase B complex auxiliary subunit NAA25 OS=Arabidopsis th... [more]
BLAST of CmaCh02G007210 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G58450.12.5e-0664.86Tetratricopeptide repeat (TPR)-like superfamily protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh02G007210.1CmaCh02G007210.1mRNA