CmaCh02G007090 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh02G007090
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	WRKY transcription factor WRKY24-like isoform X1
Location	Cma_Chr02: 4293272 .. 4296213 (+)
RNA-Seq Expression	CmaCh02G007090
Synteny	CmaCh02G007090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGTAATCTTCTTCTTCTTCTTCTTCCTCTTTGTTTTTGAGTTCAAACCTTCCCATGGTTATGGAGTTCTTCTTCTCCAGTAGAGTCGAGGAGGATCCCAACGACGGCCGTCCCAGACTGCCGGAGAGTACTGCGCCGCCCATTTCGTCTAAGTTCAGTTCGACTCCGACTCCGAATCCGCCATTGTTGTCGGCCATGTCTCAGCCTCTTTTCTCCCCTTCTTCCTTCTTCACTATCCCTCCAGGGATCAGCCCCACCCAACTTCTTGATTCCCCTGTTCTTCTTACCTCCTCTAATGTAAGTTCTACTTTTAATTTCATTTTATTCTTTTGGTCTTCTCTTTCATTTCATCACCAACTGCTGCTCATGATTTTATCTGCAGTTTCAGGCATCGCCGACCACCGGAGCAATTTCGACCGGCCACCACCAAAAGAACATGAAACAAGAACAACATAACTTAGCTGAGTTCTCATTTCCTCGTACAAATCCCACAAAATCATCATCGTCATCATCAATTATGTTTCAATCGTCTTCAATGGTACGTTGAACAGAAAATACAAGAACAAAACATGGAAGATTCAAATCCCTTCTCTTTTTTAACCTCTATTCCTTCAAGCTGTTTAAATATTTTCCAAATTTAAAGCACACAAACAAATTCTTAAAAATTGTTTCCTAACCATTTTGTTTTTTTTTAAGGTAATCCATTAATTTTAAGTGATTAGAATTTATTCGAAAAGAATGAACATCCGAAAATTAAACCCCTCAATCATTAAGTTTCAAAACGAGAGTTTACTTTCTTGAATTTGAGAATAGGTATTTGCATGAGAACCCTTTAGATTATTTTTTTAATGTTTTCTCTATAATTTGATGAACCGAACTTAGATCGAACCAGGATTTCACAATTTGGAGAACAAGTATCACGTGTGCCATCGAGTTACAATACTTCTGTGTTGACTTTAATTTTCCTTATTCCTTAAGTTTGTTCTCATAGTCCAACAGTATTTTTATATATAGAACCTCGTAACACATTGTCTATTTGGTACTCGATTATCTTCTCTTAAGCTTGCCCATCAAATTGGTCGAGATGAGTCTAGTATTTTTATCCTTATATATCAATTTTTGGGAGTTTATTTCATGTTTTTGGACTTAATTTTAAGTGTTCCAAACTAGTCATTGAATTATTCTTATAAGGTTGTGGTTGAATTATTCTTAAGGTTGTCCATCAAATCTTGACTCTAAATTTCCAAATTTTTAGTTAACTTGATTTTGTCGTCCCTTTACAGCAGCAAAATCAGCCATGGGTATCTCAAGCCGCCTTCAATTTCCCCCCGGAGACCACCATGAACGGCGGTTCGAAATCCGACCAGCACCCACCATCTCAACCAAAAAACAGAGCATCTGACGACGGGTATAATTGGAGGAAATACGGCCAAAAACTTGTAAAAGGAAGTGAAAATCCCAGAAGCTATTACAAATGTACACACCCTACTTGCCCTGTTAGAAAGCAAGTCGAAAAATCATTGAACGGCCAAATTACAGAAATCGTTTACAAAAGTAAACACAATCATCCAAAACCAGAGTTCCCAAGAAGATCATCATCGGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATGGCTATCACAAGCTTTACCTCAAACAATGGCGGCAGAGCCAAAGCATTCAATGGCCTCTGATTCCATTCCGACGCCGGAGAACTCTTCAACCACGATTGGGGATGATGATTCCGATGAACAGGATGCAAAAAGATGGTTTTTTTCGAAACCCCATTTGATTTTATTTCATTTTTTTCAAGAAAAATCTTGTTTGATTCACATTTTTGTAGGAAAAGCGAGAGCGAGAACGAAATTATATCGGCCGCCGGAGGGAAAACGGTGAGAGAACAGAGGGTTGTGGTTCAAACGATTAGTAGCGTTGATAAACTAGACGATGGATATTGGTGGAGAAAATATGGACAGAAAGTTGTGAAGGGAAATCCAAATCCAAGGTACATTCAAACATTTTACGTACTCAATTATGGTTTAACACACGTATATATATATCTTCTGCCACACCCACGCTCCGAGCACGATGCACTGCACATAGGCATATGCTTGGGGTGTGGGCGTGGTGGTCGGAGGCCGAGGGTGGTTGATGGCGGCGGTGCGCGTGCACCCACACACCCCACCTCCCTCCGCATACTCCCACATATTTGATCATTTATTATAGGCGAATATTTTGTATGATTGTGATCGAAGATACTATTACGATTTATCATAGTTATCATATTTTACCCTTTATTATAAGTAAATATCGATACTGAACTTCCATTACGGATTACCATTACGAACTATAGGTATCATATAAATATCTTATACCTATTTATTGATTGATTTAATCATGAAAGTTTATAATTTTAAAGTTGATCAAAAGCTATATTGATGAACTCAGGAGCTACTACAAGTGCACGTACGCAGGCTGTGGAGTGAGAAAGCACATAGAGAGGGCGTCCCACGATTTAAAGGCAGTCATGACTACCTACGAAGGCAAGCATAACCATGAAATTCCGGCAGCCCGCGGCGGAGGTAGCAGACCAGTATCCAATAATCACGGCAATGACAACGGTCGTGCATCAAACGGGGGCGGCCACGTATGGCCGAGTTCCGAGATTTCTGGTGGCGATGATGCATTCTCTAACATGCTGTGGAGGACCAAAGAAGAGACCGCCGATGAGATTTTCCGGTCGTTGTTAGACTGATAAAAGAGTGTTCCTAGGTGGGACACTCATGAAAGTAGGTTTATGTTTATAGTTTAATTAATTAACATAGATGGATAAAAATGACATGTTTAGTTAAGATATACTTACAAATATATGCTTACATGTTAATGATTTGTATTAAGACCGTGTTCGAGTTTAAATTCAAACGTCTAATTTCTTTG

mRNA sequence

GCGTAATCTTCTTCTTCTTCTTCTTCCTCTTTGTTTTTGAGTTCAAACCTTCCCATGGTTATGGAGTTCTTCTTCTCCAGTAGAGTCGAGGAGGATCCCAACGACGGCCGTCCCAGACTGCCGGAGAGTACTGCGCCGCCCATTTCGTCTAAGTTCAGTTCGACTCCGACTCCGAATCCGCCATTGTTGTCGGCCATGTCTCAGCCTCTTTTCTCCCCTTCTTCCTTCTTCACTATCCCTCCAGGGATCAGCCCCACCCAACTTCTTGATTCCCCTGTTCTTCTTACCTCCTCTAATTTTCAGGCATCGCCGACCACCGGAGCAATTTCGACCGGCCACCACCAAAAGAACATGAAACAAGAACAACATAACTTAGCTGAGTTCTCATTTCCTCGTACAAATCCCACAAAATCATCATCGTCATCATCAATTATGTTTCAATCGTCTTCAATGCAGCAAAATCAGCCATGGGTATCTCAAGCCGCCTTCAATTTCCCCCCGGAGACCACCATGAACGGCGGTTCGAAATCCGACCAGCACCCACCATCTCAACCAAAAAACAGAGCATCTGACGACGGGTATAATTGGAGGAAATACGGCCAAAAACTTGTAAAAGGAAGTGAAAATCCCAGAAGCTATTACAAATGTACACACCCTACTTGCCCTGTTAGAAAGCAAGTCGAAAAATCATTGAACGGCCAAATTACAGAAATCGTTTACAAAAGTAAACACAATCATCCAAAACCAGAGTTCCCAAGAAGATCATCATCGGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATGGCTATCACAAGCTTTACCTCAAACAATGGCGGCAGAGCCAAAGCATTCAATGGCCTCTGATTCCATTCCGACGCCGGAGAACTCTTCAACCACGATTGGGGATGATGATTCCGATGAACAGGATGCAAAAAGATGGAAAAGCGAGAGCGAGAACGAAATTATATCGGCCGCCGGAGGGAAAACGGTGAGAGAACAGAGGGTTGTGGTTCAAACGATTAGTAGCGTTGATAAACTAGACGATGGATATTGGTGGAGAAAATATGGACAGAAAGTTGTGAAGGGAAATCCAAATCCAAGGAGCTACTACAAGTGCACGTACGCAGGCTGTGGAGTGAGAAAGCACATAGAGAGGGCGTCCCACGATTTAAAGGCAGTCATGACTACCTACGAAGGCAAGCATAACCATGAAATTCCGGCAGCCCGCGGCGGAGGTAGCAGACCAGTATCCAATAATCACGGCAATGACAACGGTCGTGCATCAAACGGGGGCGGCCACGTATGGCCGAGTTCCGAGATTTCTGGTGGCGATGATGCATTCTCTAACATGCTGTGGAGGACCAAAGAAGAGACCGCCGATGAGATTTTCCGGTCGTTGTTAGACTGATAAAAGAGTGTTCCTAGGTGGGACACTCATGAAAGTAGGTTTATGTTTATAGTTTAATTAATTAACATAGATGGATAAAAATGACATGTTTAGTTAAGATATACTTACAAATATATGCTTACATGTTAATGATTTGTATTAAGACCGTGTTCGAGTTTAAATTCAAACGTCTAATTTCTTTG

Coding sequence (CDS)

ATGGTTATGGAGTTCTTCTTCTCCAGTAGAGTCGAGGAGGATCCCAACGACGGCCGTCCCAGACTGCCGGAGAGTACTGCGCCGCCCATTTCGTCTAAGTTCAGTTCGACTCCGACTCCGAATCCGCCATTGTTGTCGGCCATGTCTCAGCCTCTTTTCTCCCCTTCTTCCTTCTTCACTATCCCTCCAGGGATCAGCCCCACCCAACTTCTTGATTCCCCTGTTCTTCTTACCTCCTCTAATTTTCAGGCATCGCCGACCACCGGAGCAATTTCGACCGGCCACCACCAAAAGAACATGAAACAAGAACAACATAACTTAGCTGAGTTCTCATTTCCTCGTACAAATCCCACAAAATCATCATCGTCATCATCAATTATGTTTCAATCGTCTTCAATGCAGCAAAATCAGCCATGGGTATCTCAAGCCGCCTTCAATTTCCCCCCGGAGACCACCATGAACGGCGGTTCGAAATCCGACCAGCACCCACCATCTCAACCAAAAAACAGAGCATCTGACGACGGGTATAATTGGAGGAAATACGGCCAAAAACTTGTAAAAGGAAGTGAAAATCCCAGAAGCTATTACAAATGTACACACCCTACTTGCCCTGTTAGAAAGCAAGTCGAAAAATCATTGAACGGCCAAATTACAGAAATCGTTTACAAAAGTAAACACAATCATCCAAAACCAGAGTTCCCAAGAAGATCATCATCGGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATGGCTATCACAAGCTTTACCTCAAACAATGGCGGCAGAGCCAAAGCATTCAATGGCCTCTGATTCCATTCCGACGCCGGAGAACTCTTCAACCACGATTGGGGATGATGATTCCGATGAACAGGATGCAAAAAGATGGAAAAGCGAGAGCGAGAACGAAATTATATCGGCCGCCGGAGGGAAAACGGTGAGAGAACAGAGGGTTGTGGTTCAAACGATTAGTAGCGTTGATAAACTAGACGATGGATATTGGTGGAGAAAATATGGACAGAAAGTTGTGAAGGGAAATCCAAATCCAAGGAGCTACTACAAGTGCACGTACGCAGGCTGTGGAGTGAGAAAGCACATAGAGAGGGCGTCCCACGATTTAAAGGCAGTCATGACTACCTACGAAGGCAAGCATAACCATGAAATTCCGGCAGCCCGCGGCGGAGGTAGCAGACCAGTATCCAATAATCACGGCAATGACAACGGTCGTGCATCAAACGGGGGCGGCCACGTATGGCCGAGTTCCGAGATTTCTGGTGGCGATGATGCATTCTCTAACATGCTGTGGAGGACCAAAGAAGAGACCGCCGATGAGATTTTCCGGTCGTTGTTAGACTGA

Protein sequence

MVMEFFFSSRVEEDPNDGRPRLPESTAPPISSKFSSTPTPNPPLLSAMSQPLFSPSSFFTIPPGISPTQLLDSPVLLTSSNFQASPTTGAISTGHHQKNMKQEQHNLAEFSFPRTNPTKSSSSSSIMFQSSSMQQNQPWVSQAAFNFPPETTMNGGSKSDQHPPSQPKNRASDDGYNWRKYGQKLVKGSENPRSYYKCTHPTCPVRKQVEKSLNGQITEIVYKSKHNHPKPEFPRRSSSASSSSSSSSSSSWLSQALPQTMAAEPKHSMASDSIPTPENSSTTIGDDDSDEQDAKRWKSESENEIISAAGGKTVREQRVVVQTISSVDKLDDGYWWRKYGQKVVKGNPNPRSYYKCTYAGCGVRKHIERASHDLKAVMTTYEGKHNHEIPAARGGGSRPVSNNHGNDNGRASNGGGHVWPSSEISGGDDAFSNMLWRTKEETADEIFRSLLD

Homology

[Close]

BLAST of CmaCh02G007090 vs. ExPASy Swiss-Prot
Match: Q6B6R4 (WRKY transcription factor WRKY24 OS=Oryza sativa subsp. indica OX=39946 GN=WRKY24 PE=2 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 2.5e-83
Identity = 199/428 (46.50%), Postives = 248/428 (57.94%), Query Frame = 0


Query: 32  SKFSSTPTPNPPLLSAMSQPLFSPSSFFTIPPGISPTQLLDSPVLLTSSNFQASPTTGAI 91
           S++ +   P+ PL    S P  SPSSFF  P G++    L SPVLLTSS F  SPTTGA 
Sbjct: 43  SRYKAMTPPSLPL----SPPPVSPSSFFNSPIGMNQADFLGSPVLLTSSIF-PSPTTGAF 102

Query: 92  STGH-------------HQKNMKQEQHNLAEFSFPRTNPTKSSSSSSIMFQS-------- 151
           ++ H              Q    +++++ ++FSF +T P    ++ +  FQ         
Sbjct: 103 ASQHFDWRPEVAAAQSADQGGKDEQRNSYSDFSF-QTAPASEEAARTTTFQPPVPPALLG 162

Query: 152 ----SSMQQNQPW------------VSQAAFNFPP--------ETTMNGGSKSDQHPPSQ 211
                S QQ QPW             + A+F   P           + GG    Q    Q
Sbjct: 163 DEAYRSQQQQQPWGYQQQPAGMDAGANAASFGAAPFQATSSEMAPQVQGGGGYSQ---PQ 222

Query: 212 PKNRASDDGYNWRKYGQKLVKGSENPRSYYKCTHPTCPVRKQVEKSLNGQITEIVYKSKH 271
            + R+SDDGYNWRKYGQK VKGSENPRSYYKCT P CP +K+VE+SL+GQITEIVYK  H
Sbjct: 223 SQRRSSDDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLDGQITEIVYKGTH 282

Query: 272 NHPKPEFPRRSSSASSSSSSSSSSSWLSQALPQTMAAEPKHSMASDSIPTPENSSTTIGD 331
           NH KP+  RR+S +S++    S              +E      S +  TPENSS + GD
Sbjct: 283 NHAKPQNTRRNSGSSAAQVLQSGGD----------MSEHSFGGMSGTAATPENSSASFGD 342

Query: 332 D-----------------DSDEQDAKRWKSESENEIISAAGGKTVREQRVVVQTISSVDK 391
           D                 D DE D+KRW+ + + E IS AG +TVRE RVVVQT+S +D 
Sbjct: 343 DEIGVGSPRAGNGGGDEFDDDEPDSKRWRKDGDGEGISMAGNRTVREPRVVVQTMSDIDI 402

Query: 392 LDDGYWWRKYGQKVVKGNPNPRSYYKCTYAGCGVRKHIERASHDLKAVMTTYEGKHNHEI 398
           LDDGY WRKYGQKVVKGNPNPRSYYKCT AGC VRKH+ERASHDL+AV+TTYEGKHNH++
Sbjct: 403 LDDGYRWRKYGQKVVKGNPNPRSYYKCTTAGCPVRKHVERASHDLRAVITTYEGKHNHDV 451

[Close]

BLAST of CmaCh02G007090 vs. ExPASy Swiss-Prot
Match: Q6IEQ7 (WRKY transcription factor WRKY24 OS=Oryza sativa subsp. japonica OX=39947 GN=WRKY24 PE=2 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 5.5e-83
Identity = 199/428 (46.50%), Postives = 247/428 (57.71%), Query Frame = 0


Query: 32  SKFSSTPTPNPPLLSAMSQPLFSPSSFFTIPPGISPTQLLDSPVLLTSSNFQASPTTGAI 91
           S++ +   P+ PL    S P  SPSSFF  P G++    L SPVLLTSS F  SPTTGA 
Sbjct: 43  SRYKAMTPPSLPL----SPPPVSPSSFFNSPIGMNQADFLGSPVLLTSSIF-PSPTTGAF 102

Query: 92  STGH-------------HQKNMKQEQHNLAEFSFPRTNPTKSSSSSSIMFQS-------- 151
           ++ H              Q    +++++ ++FSF +T P    +  +  FQ         
Sbjct: 103 ASQHFDWRPEVAAAQSADQGGKDEQRNSYSDFSF-QTAPASEEAVRTTTFQPPVPPAPLG 162

Query: 152 ----SSMQQNQPW------------VSQAAFNFPP--------ETTMNGGSKSDQHPPSQ 211
                S QQ QPW             + A+F   P           + GG    Q    Q
Sbjct: 163 DEAYRSQQQQQPWGYQQQPAGMDAGANAASFGAAPFQATSSEMAPQVQGGGGYSQ---PQ 222

Query: 212 PKNRASDDGYNWRKYGQKLVKGSENPRSYYKCTHPTCPVRKQVEKSLNGQITEIVYKSKH 271
            + R+SDDGYNWRKYGQK VKGSENPRSYYKCT P CP +K+VE+SL+GQITEIVYK  H
Sbjct: 223 SQRRSSDDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLDGQITEIVYKGTH 282

Query: 272 NHPKPEFPRRSSSASSSSSSSSSSSWLSQALPQTMAAEPKHSMASDSIPTPENSSTTIGD 331
           NH KP+  RR+S +S++    S              +E      S +  TPENSS + GD
Sbjct: 283 NHAKPQNTRRNSGSSAAQVLQSGGD----------MSEHSFGGMSGTAATPENSSASFGD 342

Query: 332 D-----------------DSDEQDAKRWKSESENEIISAAGGKTVREQRVVVQTISSVDK 391
           D                 D DE D+KRW+ + + E IS AG +TVRE RVVVQT+S +D 
Sbjct: 343 DEIRVGSPRAGNGGGDEFDDDEPDSKRWRKDGDGEGISMAGNRTVREPRVVVQTMSDIDI 402

Query: 392 LDDGYWWRKYGQKVVKGNPNPRSYYKCTYAGCGVRKHIERASHDLKAVMTTYEGKHNHEI 398
           LDDGY WRKYGQKVVKGNPNPRSYYKCT AGC VRKH+ERASHDL+AV+TTYEGKHNH++
Sbjct: 403 LDDGYRWRKYGQKVVKGNPNPRSYYKCTTAGCPVRKHVERASHDLRAVITTYEGKHNHDV 451

[Close]

BLAST of CmaCh02G007090 vs. ExPASy Swiss-Prot
Match: Q8S8P5 (Probable WRKY transcription factor 33 OS=Arabidopsis thaliana OX=3702 GN=WRKY33 PE=1 SV=2)

HSP 1 Score: 286.2 bits (731), Expect = 6.5e-76
Identity = 192/398 (48.24%), Postives = 244/398 (61.31%), Query Frame = 0


Query: 43  PLLSAMSQPLFSPSSFFTIPPGISPTQLLDSPVLLTSS-NFQASPTTGAISTG-HHQKNM 102
           P   ++S  L SPS+ F      SP+  LDSP  ++SS N  ASPTTGA+ T   +QK +
Sbjct: 48  PSSISISPSLVSPSTCF------SPSLFLDSPAFVSSSANVLASPTTGALITNVTNQKGI 107

Query: 103 KQ------EQHNLAEFSF------------PRTNPTKSSSSSSIMFQSSSMQ---QNQPW 162
            +         NL +FSF              T  T +++++S +FQS   Q   Q++ W
Sbjct: 108 NEGDKSNNNNFNLFDFSFHTQSSGVSAPTTTTTTTTTTTTTNSSIFQSQEQQKKNQSEQW 167

Query: 163 VSQAAFNFPPETTMNGGSKSDQHPPSQPKNRASDDGYNWRKYGQKLVKGSENPRSYYKCT 222
            SQ       ET  N  + S     +  + R  +DGYNWRKYGQK VKGSENPRSYYKCT
Sbjct: 168 -SQT------ETRPNNQAVS----YNGREQRKGEDGYNWRKYGQKQVKGSENPRSYYKCT 227

Query: 223 HPTCPVRKQVEKSLNGQITEIVYKSKHNHPKPEFPRRSSSASSSSSSSSSSSWLSQALPQ 282
            P CP +K+VE+SL GQITEIVYK  HNHPKP+  RRSSS+SS+  S+  ++ L     Q
Sbjct: 228 FPNCPTKKKVERSLEGQITEIVYKGSHNHPKPQSTRRSSSSSSTFHSAVYNASLDHN-RQ 287

Query: 283 TMAAEPKHSMA---SDSIPTPENSSTT---IGDDD---------SDEQD------AKRWK 342
             + +P  + +   SDS    +  +TT   +GDD+          DE+D      AKRWK
Sbjct: 288 ASSDQPNSNNSFHQSDSFGMQQEDNTTSDSVGDDEFEQGSSIVSRDEEDCGSEPEAKRWK 347

Query: 343 SESENEIISAAGGKTVREQRVVVQTISSVDKLDDGYWWRKYGQKVVKGNPNPRSYYKCTY 397
            ++E    +  G KTVRE R+VVQT S +D LDDGY WRKYGQKVVKGNPNPRSYYKCT 
Sbjct: 348 GDNETNGGNGGGSKTVREPRIVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTT 407

[Close]

BLAST of CmaCh02G007090 vs. ExPASy Swiss-Prot
Match: Q9C5T3 (Probable WRKY transcription factor 26 OS=Arabidopsis thaliana OX=3702 GN=WRKY26 PE=1 SV=2)

HSP 1 Score: 255.4 bits (651), Expect = 1.2e-66
Identity = 163/357 (45.66%), Postives = 193/357 (54.06%), Query Frame = 0


Query: 42  PPLLSAMSQPL-FSPSSFFTIPPGISPTQLLDSPVLLTSSNFQASPTTGAISTGHHQKNM 101
           P   +A   PL  SPS +FT+PPG++P   LDSP+L TSSN   SPTTG         N 
Sbjct: 11  PKFKTATPSPLPLSPSPYFTMPPGLTPADFLDSPLLFTSSNILPSPTTGTFPAQSLNYNN 70

Query: 102 KQEQHNLAEFSFPRTNPTKSSSSSSIMFQSSSMQQNQPWVSQAAFNFPPETTMNGGSKSD 161
                +  E  +  T P         +F  S + Q  P +      F  E          
Sbjct: 71  NGLLIDKNEIKYEDTTPP--------LFLPSMVTQPLPQLDL----FKSEI--------- 130

Query: 162 QHPPSQPKNRASDDGYNWRKYGQKLVKGSENPRSYYKCTHPTCPVRKQVEKSL-NGQITE 221
                   N+ SDDGYNWRKYGQK VKGSENPRSY+KCT+P C  +K+VE SL  GQ+ E
Sbjct: 131 -----MSSNKTSDDGYNWRKYGQKQVKGSENPRSYFKCTYPNCLTKKKVETSLVKGQMIE 190

Query: 222 IVYKSKHNHPKPEFPRRSSSASSSSSSSSSSSWLSQALPQTMAAEPKHSMASDSIPTPEN 281
           IVYK  HNHPKP+  +RSSS                                 +I   +N
Sbjct: 191 IVYKGSHNHPKPQSTKRSSST--------------------------------AIAAHQN 250

Query: 282 SSTTIGDD-DSDEQDAKRWKSESENEIISAAGGKTVREQRVVVQTISSVDKLDDGYWWRK 341
           SS   G D   DE +AKRWK E           + V+E RVVVQT S +D LDDGY WRK
Sbjct: 251 SSNGDGKDIGEDETEAKRWKRE-----------ENVKEPRVVVQTTSDIDILDDGYRWRK 298

Query: 342 YGQKVVKGNPNPRSYYKCTYAGCGVRKHIERASHDLKAVMTTYEGKHNHEIPAARGG 396
           YGQKVVKGNPNPRSYYKCT+ GC VRKH+ERA  D K+V+TTYEGKH H+IP  R G
Sbjct: 311 YGQKVVKGNPNPRSYYKCTFTGCFVRKHVERAFQDPKSVITTYEGKHKHQIPTPRRG 298

[Close]

BLAST of CmaCh02G007090 vs. ExPASy Swiss-Prot
Match: Q6VWJ6 (WRKY transcription factor SUSIBA2 OS=Hordeum vulgare OX=4513 GN=WRKY46 PE=1 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.4e-65
Identity = 187/451 (41.46%), Postives = 242/451 (53.66%), Query Frame = 0


Query: 54  SPSSFFTIPPGISPTQLLDSPVLLTSSNFQASPTTGAI---------------------- 113
           S  S  TIP G SP+ LLDSPVLLT+   + SPTTG++                      
Sbjct: 9   SRESCLTIPAGFSPSALLDSPVLLTNFKVEPSPTTGSLGMAAILHKSAHPDMLPSPRDKS 68

Query: 114 ------------------------STGHHQKNMKQEQHNLAEFSFPRTNPTKSSSS---- 173
                                   S      ++K+ +H++   S    NP+ SSS+    
Sbjct: 69  VRNAHEDRGSRDFEFKPHLNSSSQSLAPAMSDLKKHEHSMQNQSM---NPSSSSSNMVNE 128

Query: 174 --------SSIMFQSSSMQQNQP-WVSQAAFNFPPET------TMNGGSKSDQHPPSQ-P 233
                   SS+    S+  QNQP  +     + P E        MN    + Q P S+  
Sbjct: 129 NRPPCSRESSLTVNVSA--QNQPVGMVGLTDSMPAEVGTSEPQQMNSSDNAMQEPQSENV 188

Query: 234 KNRASDDGYNWRKYGQKLVKGSENPRSYYKCTHPTCPVRKQVEKSLNGQITEIVYKSKHN 293
            ++++DDGYNWRKYGQK VKGSENPRSYYKCTHP C V+K +E++++G ITE+VYK +HN
Sbjct: 189 ADKSADDGYNWRKYGQKHVKGSENPRSYYKCTHPNCEVKKLLERAVDGLITEVVYKGRHN 248

Query: 294 HPKPEFPRR---------------SSSASSSSSSSSSSSWLSQALPQTMAAEPKHSMASD 353
           HPKP+  RR                 ++++   SS++ S L+  +      EP  +  SD
Sbjct: 249 HPKPQPNRRLAGGAVPSNQGEERYDGASAADDKSSNALSNLANPVHSPGMVEPVPASVSD 308

Query: 354 SIPTPENSSTTIGDDDSDEQD--AKRWKSESENEIISAAGGKTVREQRVVVQTISSVDKL 413
                       GDD ++E+D  +KR K ES   I +A  GK  RE RVVVQT+S VD L
Sbjct: 309 DDIDAGGGRPYPGDDATEEEDLESKRRKMESAG-IDAALMGKPNREPRVVVQTVSEVDIL 368

Query: 414 DDGYWWRKYGQKVVKGNPNPRSYYKCTYAGCGVRKHIERASHDLKAVMTTYEGKHNHEIP 416
           DDGY WRKYGQKVVKGNPNPRSYYKCT  GC VRKH+ERASHD K+V+TTYEGKHNHE+P
Sbjct: 369 DDGYRWRKYGQKVVKGNPNPRSYYKCTSTGCPVRKHVERASHDPKSVITTYEGKHNHEVP 428

[Close]

BLAST of CmaCh02G007090 vs. TAIR 10
Match: AT2G38470.1 (WRKY DNA-binding protein 33 )

HSP 1 Score: 286.2 bits (731), Expect = 4.6e-77
Identity = 192/398 (48.24%), Postives = 244/398 (61.31%), Query Frame = 0


Query: 43  PLLSAMSQPLFSPSSFFTIPPGISPTQLLDSPVLLTSS-NFQASPTTGAISTG-HHQKNM 102
           P   ++S  L SPS+ F      SP+  LDSP  ++SS N  ASPTTGA+ T   +QK +
Sbjct: 48  PSSISISPSLVSPSTCF------SPSLFLDSPAFVSSSANVLASPTTGALITNVTNQKGI 107

Query: 103 KQ------EQHNLAEFSF------------PRTNPTKSSSSSSIMFQSSSMQ---QNQPW 162
            +         NL +FSF              T  T +++++S +FQS   Q   Q++ W
Sbjct: 108 NEGDKSNNNNFNLFDFSFHTQSSGVSAPTTTTTTTTTTTTTNSSIFQSQEQQKKNQSEQW 167

Query: 163 VSQAAFNFPPETTMNGGSKSDQHPPSQPKNRASDDGYNWRKYGQKLVKGSENPRSYYKCT 222
            SQ       ET  N  + S     +  + R  +DGYNWRKYGQK VKGSENPRSYYKCT
Sbjct: 168 -SQT------ETRPNNQAVS----YNGREQRKGEDGYNWRKYGQKQVKGSENPRSYYKCT 227

Query: 223 HPTCPVRKQVEKSLNGQITEIVYKSKHNHPKPEFPRRSSSASSSSSSSSSSSWLSQALPQ 282
            P CP +K+VE+SL GQITEIVYK  HNHPKP+  RRSSS+SS+  S+  ++ L     Q
Sbjct: 228 FPNCPTKKKVERSLEGQITEIVYKGSHNHPKPQSTRRSSSSSSTFHSAVYNASLDHN-RQ 287

Query: 283 TMAAEPKHSMA---SDSIPTPENSSTT---IGDDD---------SDEQD------AKRWK 342
             + +P  + +   SDS    +  +TT   +GDD+          DE+D      AKRWK
Sbjct: 288 ASSDQPNSNNSFHQSDSFGMQQEDNTTSDSVGDDEFEQGSSIVSRDEEDCGSEPEAKRWK 347

Query: 343 SESENEIISAAGGKTVREQRVVVQTISSVDKLDDGYWWRKYGQKVVKGNPNPRSYYKCTY 397
            ++E    +  G KTVRE R+VVQT S +D LDDGY WRKYGQKVVKGNPNPRSYYKCT 
Sbjct: 348 GDNETNGGNGGGSKTVREPRIVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTT 407

[Close]

BLAST of CmaCh02G007090 vs. TAIR 10
Match: AT5G07100.1 (WRKY DNA-binding protein 26 )

HSP 1 Score: 255.4 bits (651), Expect = 8.7e-68
Identity = 163/357 (45.66%), Postives = 193/357 (54.06%), Query Frame = 0


Query: 42  PPLLSAMSQPL-FSPSSFFTIPPGISPTQLLDSPVLLTSSNFQASPTTGAISTGHHQKNM 101
           P   +A   PL  SPS +FT+PPG++P   LDSP+L TSSN   SPTTG         N 
Sbjct: 11  PKFKTATPSPLPLSPSPYFTMPPGLTPADFLDSPLLFTSSNILPSPTTGTFPAQSLNYNN 70

Query: 102 KQEQHNLAEFSFPRTNPTKSSSSSSIMFQSSSMQQNQPWVSQAAFNFPPETTMNGGSKSD 161
                +  E  +  T P         +F  S + Q  P +      F  E          
Sbjct: 71  NGLLIDKNEIKYEDTTPP--------LFLPSMVTQPLPQLDL----FKSEI--------- 130

Query: 162 QHPPSQPKNRASDDGYNWRKYGQKLVKGSENPRSYYKCTHPTCPVRKQVEKSL-NGQITE 221
                   N+ SDDGYNWRKYGQK VKGSENPRSY+KCT+P C  +K+VE SL  GQ+ E
Sbjct: 131 -----MSSNKTSDDGYNWRKYGQKQVKGSENPRSYFKCTYPNCLTKKKVETSLVKGQMIE 190

Query: 222 IVYKSKHNHPKPEFPRRSSSASSSSSSSSSSSWLSQALPQTMAAEPKHSMASDSIPTPEN 281
           IVYK  HNHPKP+  +RSSS                                 +I   +N
Sbjct: 191 IVYKGSHNHPKPQSTKRSSST--------------------------------AIAAHQN 250

Query: 282 SSTTIGDD-DSDEQDAKRWKSESENEIISAAGGKTVREQRVVVQTISSVDKLDDGYWWRK 341
           SS   G D   DE +AKRWK E           + V+E RVVVQT S +D LDDGY WRK
Sbjct: 251 SSNGDGKDIGEDETEAKRWKRE-----------ENVKEPRVVVQTTSDIDILDDGYRWRK 298

Query: 342 YGQKVVKGNPNPRSYYKCTYAGCGVRKHIERASHDLKAVMTTYEGKHNHEIPAARGG 396
           YGQKVVKGNPNPRSYYKCT+ GC VRKH+ERA  D K+V+TTYEGKH H+IP  R G
Sbjct: 311 YGQKVVKGNPNPRSYYKCTFTGCFVRKHVERAFQDPKSVITTYEGKHKHQIPTPRRG 298

[Close]

BLAST of CmaCh02G007090 vs. TAIR 10
Match: AT2G03340.1 (WRKY DNA-binding protein 3 )

HSP 1 Score: 246.9 bits (629), Expect = 3.1e-65
Identity = 166/375 (44.27%), Postives = 213/375 (56.80%), Query Frame = 0


Query: 55  PSSFFTIPPGISPTQLLDSPVLLTSSNFQASPTTGAISTGHHQKNMKQEQHNLAEFSFPR 114
           P   FT+PPG+SP  LLDSP    S     SP  G      HQ+ + Q      + +   
Sbjct: 123 PPGMFTVPPGLSPATLLDSP----SFFGLFSPLQGTFGM-THQQALAQVTAQAVQGNNVH 182

Query: 115 TNPTKSSSSSSIMFQSSSMQQNQPWVSQAAFNFPP--------ETTMNGGSKSDQ----H 174
              ++ S   S   Q    QQ        +F+  P        + T  G  ++ +     
Sbjct: 183 MQQSQQSEYPSSTQQQQQQQQQASLTEIPSFSSAPRSQIRASVQETSQGQRETSEISVFE 242

Query: 175 PPSQPKN--RASDDGYNWRKYGQKLVKGSENPRSYYKCTHPTCPVRKQVEKSLNGQITEI 234
             SQP+N  + +DDGYNWRKYGQK VKGS+ PRSYYKCTHP CPV+K+VE+SL+GQ+TEI
Sbjct: 243 HRSQPQNADKPADDGYNWRKYGQKQVKGSDFPRSYYKCTHPACPVKKKVERSLDGQVTEI 302

Query: 235 VYKSKHNHPKPEFPRRSSSASSS---------SSSSSSSSWLSQALPQTMAAEPKHSMAS 294
           +YK +HNH  P+    ++ +  S         S+SS + S   Q   Q    E + S AS
Sbjct: 303 IYKGQHNHELPQKRGNNNGSCKSSDIANQFQTSNSSLNKSKRDQETSQVTTTE-QMSEAS 362

Query: 295 DSIPTPENSSTTIGDDDSDEQDAKRWKSESENEIISAAGGKTVREQRVVVQTISSVDKLD 354
           DS     N+ T++G+   DE D KR  +E       A+  +TV E R++VQT S VD LD
Sbjct: 363 DS-EEVGNAETSVGERHEDEPDPKRRNTEVRVSEPVASSHRTVTEPRIIVQTTSEVDLLD 422

Query: 355 DGYWWRKYGQKVVKGNPNPRSYYKCTYAGCGVRKHIERASHDLKAVMTTYEGKHNHEIPA 407
           DGY WRKYGQKVVKGNP PRSYYKCT   CGVRKH+ERA+ D KAV+TTYEGKHNH++PA
Sbjct: 423 DGYRWRKYGQKVVKGNPYPRSYYKCTTPDCGVRKHVERAATDPKAVVTTYEGKHNHDVPA 482

[Close]

BLAST of CmaCh02G007090 vs. TAIR 10
Match: AT4G26640.2 (WRKY family transcription factor family protein )

HSP 1 Score: 243.8 bits (621), Expect = 2.6e-64
Identity = 171/414 (41.30%), Postives = 226/414 (54.59%), Query Frame = 0


Query: 44  LLSAMSQPLFSPSSFFTIPPGISPTQLLDSPVLLTSSNFQASPTTGAI------------ 103
           L+S    P+ S S+  TIPPG+SPT  L+SPV +++   + SPTTG++            
Sbjct: 40  LMSPAKLPI-SRSTDITIPPGLSPTSFLESPVFISNIKPEPSPTTGSLFKPRPVHISASS 99

Query: 104 ----STGHHQKNMKQEQHNLAEFSFPRTNPT-----KSSSSSSIMFQS---------SSM 163
                 G HQ    +++ +  EF  P +N       K  S   + FQ          SS+
Sbjct: 100 SSYTGRGFHQNTFTEQKSSEFEFRPPASNMVYAELGKIRSEPPVHFQGQGHGSSHSPSSI 159

Query: 164 QQNQPWVSQAAFNFPP----ETTMNGGSKSDQH---PPSQPKNRAS------DDGYNWRK 223
                  S+ +   PP     T+ +  + SDQ      SQ  +R S      DDGYNWRK
Sbjct: 160 SDAAGSSSELSRPTPPCQMTPTSSDIPAGSDQEESIQTSQNDSRGSTPSILADDGYNWRK 219

Query: 224 YGQKLVKGSENPRSYYKCTHPTCPVRKQVEKSLNGQITEIVYKSKHNHPKPEFPRRSSSA 283
           YGQK VKGSE PRSYYKCTHP C V+K  E+S +GQIT+I+YK  H+HPKP+  RR+S  
Sbjct: 220 YGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITDIIYKGTHDHPKPQPGRRNSGG 279

Query: 284 ------------SSSSSSSSSSSWLSQALPQTMAAEPKHSMASDSIPTPENSSTTIGDDD 343
                       SS+      S   + + P      P+    S S    E +++    D+
Sbjct: 280 MAAQEERLDKYPSSTGRDEKGSGVYNLSNPNEQTGNPEVPPISASDDGGEAAASNRNKDE 339

Query: 344 SDEQD--AKRWKSESENEIISAAGGKTVREQRVVVQTISSVDKLDDGYWWRKYGQKVVKG 401
            D+ D  +KR + E   EI      K +RE RVVVQT+S VD LDDGY WRKYGQKVV+G
Sbjct: 340 PDDDDPFSKRRRMEGAMEITPLV--KPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRG 399

[Close]

BLAST of CmaCh02G007090 vs. TAIR 10
Match: AT1G13960.1 (WRKY DNA-binding protein 4 )

HSP 1 Score: 241.5 bits (615), Expect = 1.3e-63
Identity = 161/383 (42.04%), Postives = 213/383 (55.61%), Query Frame = 0


Query: 57  SFFTIPPGISPTQLLDSPVLLTSSNFQASPTTGAISTGHHQ-------KNMKQEQHNLAE 116
           S FT+PPG+SP  LLDSP  L       SP  G+    H Q       + ++   +   +
Sbjct: 122 SMFTVPPGLSPAMLLDSPSFLG----LFSPVQGSYGMTHQQALAQVTAQAVQANANMQPQ 181

Query: 117 FSFPRTNPTKSSSSSSIMFQSSSMQQNQPWVSQAAFNFPPETTMNGGSKSDQHPPSQPKN 176
             +P  +  +S SS      +S+    Q   S                   +H   QP N
Sbjct: 182 TEYPPPSQVQSFSSGQAQIPTSAPLPAQRETSDVTI--------------IEHRSQQPLN 241

Query: 177 --RASDDGYNWRKYGQKLVKGSENPRSYYKCTHPTCPVRKQVEKSLNGQITEIVYKSKHN 236
             + +DDGYNWRKYGQK VKGSE PRSYYKCT+P CPV+K+VE+SL+GQ+TEI+YK +HN
Sbjct: 242 VDKPADDGYNWRKYGQKQVKGSEFPRSYYKCTNPGCPVKKKVERSLDGQVTEIIYKGQHN 301

Query: 237 HPKPEFPRRSSSASSSSSSSSS------SSWLSQALPQTMAA----EPKHSMASDSIPTP 296
           H  P+  +R +  ++++ + SS      SS L  +  QT ++      +H   S +  T 
Sbjct: 302 HEPPQNTKRGNKDNTANINGSSINNNRGSSELGASQFQTNSSNKTKREQHEAVSQATTTE 361

Query: 297 E-----------NSSTTIGDDDSDEQDAKRWKSESE-NEIISAAGGKTVREQRVVVQTIS 356
                       N  T + + D +E D KR  +E   +E   AA  +TV E R++VQT S
Sbjct: 362 HLSEASDGEEVGNGETDVREKDENEPDPKRRSTEVRISEPAPAASHRTVTEPRIIVQTTS 421

Query: 357 SVDKLDDGYWWRKYGQKVVKGNPNPRSYYKCTYAGCGVRKHIERASHDLKAVMTTYEGKH 409
            VD LDDGY WRKYGQKVVKGNP PRSYYKCT  GCGVRKH+ERA+ D KAV+TTYEGKH
Sbjct: 422 EVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCGVRKHVERAATDPKAVVTTYEGKH 481

The following BLAST results are available for this feature:

BLAST of CmaCh02G007090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6B6R4	2.5e-83	46.50	WRKY transcription factor WRKY24 OS=Oryza sativa subsp. indica OX=39946 GN=WRKY2...	[more]
Q6IEQ7	5.5e-83	46.50	WRKY transcription factor WRKY24 OS=Oryza sativa subsp. japonica OX=39947 GN=WRK...	[more]
Q8S8P5	6.5e-76	48.24	Probable WRKY transcription factor 33 OS=Arabidopsis thaliana OX=3702 GN=WRKY33 ...	[more]
Q9C5T3	1.2e-66	45.66	Probable WRKY transcription factor 26 OS=Arabidopsis thaliana OX=3702 GN=WRKY26 ...	[more]
Q6VWJ6	1.4e-65	41.46	WRKY transcription factor SUSIBA2 OS=Hordeum vulgare OX=4513 GN=WRKY46 PE=1 SV=1	[more]

BLAST of CmaCh02G007090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38470.1	4.6e-77	48.24	WRKY DNA-binding protein 33	[more]
AT5G07100.1	8.7e-68	45.66	WRKY DNA-binding protein 26	[more]
AT2G03340.1	3.1e-65	44.27	WRKY DNA-binding protein 3	[more]
AT4G26640.2	2.6e-64	41.30	WRKY family transcription factor family protein	[more]
AT1G13960.1	1.3e-63	42.04	WRKY DNA-binding protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003657	WRKY domain	SMART	SM00774	WRKY_cls	coord: 330..389 e-value: 2.0E-35 score: 133.7 coord: 172..230 e-value: 2.0E-35 score: 133.7
IPR003657	WRKY domain	PFAM	PF03106	WRKY	coord: 173..229 e-value: 5.0E-25 score: 87.5 coord: 331..388 e-value: 4.6E-23 score: 81.2
IPR003657	WRKY domain	PROSITE	PS50811	WRKY	coord: 325..390 score: 35.427353
IPR003657	WRKY domain	PROSITE	PS50811	WRKY	coord: 173..231 score: 24.133591
IPR036576	WRKY domain superfamily	GENE3D	2.20.25.80	WRKY domain	coord: 160..232 e-value: 3.2E-26 score: 92.9 coord: 315..391 e-value: 1.3E-31 score: 110.1
IPR036576	WRKY domain superfamily	SUPERFAMILY	118290	WRKY DNA-binding domain	coord: 322..390
IPR036576	WRKY domain superfamily	SUPERFAMILY	118290	WRKY DNA-binding domain	coord: 170..231
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..304
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 288..302
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..258
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 387..425
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..48
None	No IPR available	PANTHER	PTHR31221:SF237	WRKY TRANSCRIPTION FACTOR 33-RELATED	coord: 39..403
IPR044810	WRKY transcription factor, plant	PANTHER	PTHR31221	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	coord: 39..403

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G007090.1	CmaCh02G007090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding