Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATACCATACTCTCAAACTCCAATTTCAAAACACACCATTCAAATCATGGCACCTGATTTCGGGAAGGGGAAGGTCATAACAATTTTGAGCGTCGATGGCGGGGGCATTAGAGGCATTATTCCCGGAACTATCTTAGCTTTTCTTGAGTCTAAGCTTCAGGTATATACACTGTTACGATCGTACAATAACGCATACACAAATGGACATAAAGAATTGAAAATTTTGATTTGGTGATTCATTTTGGATAGGAATTGGATGGCCCAGATGCTAGAATTGCTGATTACTTCGACGTAATTGCTGGAACGAGTACAGGTGGTTTGGTGACCTCGATGCTTACAGCTCCTAACAAGGATAATCGACCTTTGTACGCTGCCAAAGATCTTACTCGCTTCTATATGGAACATGCACCAAAAATCTTCCCTCAGAGAAGGTTTGTACAATAATTTGTATTTGGTAGCTTTTCATTATGGTTTCACTAACTAAATTGGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGTATGGTGAAATCAGTCATTTCTTAAGCTCGGTGGTGAATTTTCTTGGAAGAGTCATAGGGCCAAAGTACGACGGGAAGTACTTGAGATCATTGATACACGAATTACTTGGAGATACAACGCTTAAGCAAACGCTAACACAAGTCATTATTCCTGCTTTCGATATTAAGCGTCTTCAGCCTGTCATATTCACAACTATTGATGTATGAACACTTTCTTACCACCATTTATATATTATTTATAACCAGGCTTTCTCTTTCAGATTTTCCAACAAGTGTTAGTGAGAGATTTTTACTTTTTTCTAAAGAATGTTTTGTTATTCTTCTCAACCTAGGTGAGATCTCACAATCCACTCCGGTTCGCTCAAGTTTTTAAGATGCGTCTGATAGGGAAAAGTTTTCACACCCTTTATAACCGATGTGGGATCTCATAATTCACCTTCTTTGAGGCCCAACTAGAGTTTTCCACATCTTTATAAACAATATTTCGTTCAGGGCTTAGCGTCCACGCTGGCACTCGTTCCCTTCTCCAATCGATGTGGGACCTCCGATCCACCTCTCTTTGGGACCCAACGTTCTTGCTGACACACCGCCTCGTGCCCACCCTTTTCAGGGCTCAGCCTCCTCGCTGACACATCGTCCGGTGTCTAGCTTTGATACCATTTATAATTGCCCAAGCCCACAACGAGCATATATTGCCCTCTTTAGGCTTTCCTTTTTAAGTTTTCCTTCAAAGTTTTTAAAATACATGTGCTAGAGAGAGGTTTCCACACTCTTGTAAAGAATGTTTCATTCTCCTCTCCAACCGATGTGGGATCTTCCAGTCCTCCCCCTTCGGGACTCAACGTCCTCGCTGACCCTCGTTCCTTTCTTCAATCGATGTGGGACCCTCCAATCCACCTCCCTTTGGGGCCGAACATCTTTGCTGGCACACCGTCTCGTGTCCACCCCCTTCATAACTCAGCCTCCTCACTGACACATCCCTCGATGTCTGGTTCTGATACCATGTATAACAATCCAACCTTACCTCTAACAGATATTGTTCTTTTTGGGATTTTCCTCTCGGGCTTCCCCTCAAGGTTTTTAAAACGCGCCTAACAGGGAGAGAAAATAAAGTTTTGTTCTCTTCTCAAACGGAGGTGGGATCTTATATTATTATTTCTCGAAATTGAAGTAACAAAATTGGCATTCAGGCTAAATGGGACGAGCTAAAGAATCCAAAGTTGGCGGATGTTTGCATCAGTACCTCAGCAGCACCAACGTTCTTACCAGGCCACGAATTTCAAACTCAGGACTCCAAAGGAAACATTCGTAAATTTGACATGGTTGATGGTGGCGTTGCAGCCAATAACCCAGTAAGCATCATATTTTAGCATCATCTTTTGATTGCAAAAACCATTCTCTAAATTGAATTTGTAGACATTAGCAGCTATAACTCATGTGACGAAAGAAATGAGCTTATTGTGGCATAGAAATGAGCTATTAAACATAAAGCCCATGGAAACAAAAAGAATGTTGATCCTTTCATTAGGCACTGGTGCGCCTAAGAACGATGAGAAGTATAGCGCAGCGACGTCTTCAAAATGGGGCATGCTCGATTGGATCTACCACGGTGGAGCAGCTCCTATAGTCGACATTTTCAGCGATGCAAGCAATGATATGGTGGACTATCATATTTCGAGCATCTTCCAATCTTCAAATCATAAGAAGAATTATCTTCGGATTCAAGTAGGTTGTAATGAATATGTATTGTCATAATTGGTTCATATTTTCATTTATTTTGGTTATTAACTCTCATTTAGTTCATATTCTCATTGTGATATATGAATCCCGTGTGCTGTTGTCTAGGATGGTTGAGAGTATTGAATTTGTTTGAGTTTGAATGTCATTTTGTATTTGTTCACTAACATTTGAGAGAAATTTTGTTGAAAGATTTGGTAGGGTGAGAATGTGAGATATACACTTTATAAACGCTTCTAGTATTGAGATTGATTGTTACCCTTAAATCATTGTATCTCTTGTTTAATTTTTGTGTGTGGGTGTGTGAGTGTCATCAAACTTGCTTCTGTTTCAACTACAACATTCTAAAAATATATGAATGTGGATATCAACAGGATGACACGTTGACGGGTGATGTATCGTCTGTGGATATTGCCACCAAGAGGAATTTACTGAAGCTGATCGATGTGGGAGAGAATTTACTGAAGAAGCCATTGTCGAGGGTGAATTTGGAGTCGGGAAACTTTGAACCTCTTGATGGGGAAGGGACTAATGAAGAGGCCCTTGCTGAATTTGCTAAAATGTTGTCGGATGAGAAAAAGCTACGATTGAGCCCTTGAGGCTAACTCCTTTCCTTTGATTTATACTTGTTCTTCATCAATAATTCTTGTGTTTAATGCTTTTTAATTTGAAATTGTAAAAGTATTAGTTATATGACATTAATAAGAAATCGATTGAGACTCA
mRNA sequence
ATACCATACTCTCAAACTCCAATTTCAAAACACACCATTCAAATCATGGCACCTGATTTCGGGAAGGGGAAGGTCATAACAATTTTGAGCGTCGATGGCGGGGGCATTAGAGGCATTATTCCCGGAACTATCTTAGCTTTTCTTGAGTCTAAGCTTCAGGAATTGGATGGCCCAGATGCTAGAATTGCTGATTACTTCGACGTAATTGCTGGAACGAGTACAGGTGGTTTGGTGACCTCGATGCTTACAGCTCCTAACAAGGATAATCGACCTTTGTACGCTGCCAAAGATCTTACTCGCTTCTATATGGAACATGCACCAAAAATCTTCCCTCAGAGAAGTCATTTCTTAAGCTCGGTGGTGAATTTTCTTGGAAGAGTCATAGGGCCAAAGTACGACGGGAAGTACTTGAGATCATTGATACACGAATTACTTGGAGATACAACGCTTAAGCAAACGCTAACACAAGTCATTATTCCTGCTTTCGATATTAAGCGTCTTCAGCCTGTCATATTCACAACTATTGATGCTAAATGGGACGAGCTAAAGAATCCAAAGTTGGCGGATGTTTGCATCAGTACCTCAGCAGCACCAACGTTCTTACCAGGCCACGAATTTCAAACTCAGGACTCCAAAGGAAACATTCGTAAATTTGACATGGTTGATGGTGGCGTTGCAGCCAATAACCCAACATTAGCAGCTATAACTCATGTGACGAAAGAAATGAGCTTATTGTGGCATAGAAATGAGCTATTAAACATAAAGCCCATGGAAACAAAAAGAATGTTGATCCTTTCATTAGGCACTGGTGCGCCTAAGAACGATGAGAAGTATAGCGCAGCGACGTCTTCAAAATGGGGCATGCTCGATTGGATCTACCACGGTGGAGCAGCTCCTATAGTCGACATTTTCAGCGATGCAAGCAATGATATGGTGGACTATCATATTTCGAGCATCTTCCAATCTTCAAATCATAAGAAGAATTATCTTCGGATTCAAGATGACACGTTGACGGGTGATGTATCGTCTGTGGATATTGCCACCAAGAGGAATTTACTGAAGCTGATCGATGTGGGAGAGAATTTACTGAAGAAGCCATTGTCGAGGGTGAATTTGGAGTCGGGAAACTTTGAACCTCTTGATGGGGAAGGGACTAATGAAGAGGCCCTTGCTGAATTTGCTAAAATGTTGTCGGATGAGAAAAAGCTACGATTGAGCCCTTGAGGCTAACTCCTTTCCTTTGATTTATACTTGTTCTTCATCAATAATTCTTGTGTTTAATGCTTTTTAATTTGAAATTGTAAAAGTATTAGTTATATGACATTAATAAGAAATCGATTGAGACTCA
Coding sequence (CDS)
ATGGCACCTGATTTCGGGAAGGGGAAGGTCATAACAATTTTGAGCGTCGATGGCGGGGGCATTAGAGGCATTATTCCCGGAACTATCTTAGCTTTTCTTGAGTCTAAGCTTCAGGAATTGGATGGCCCAGATGCTAGAATTGCTGATTACTTCGACGTAATTGCTGGAACGAGTACAGGTGGTTTGGTGACCTCGATGCTTACAGCTCCTAACAAGGATAATCGACCTTTGTACGCTGCCAAAGATCTTACTCGCTTCTATATGGAACATGCACCAAAAATCTTCCCTCAGAGAAGTCATTTCTTAAGCTCGGTGGTGAATTTTCTTGGAAGAGTCATAGGGCCAAAGTACGACGGGAAGTACTTGAGATCATTGATACACGAATTACTTGGAGATACAACGCTTAAGCAAACGCTAACACAAGTCATTATTCCTGCTTTCGATATTAAGCGTCTTCAGCCTGTCATATTCACAACTATTGATGCTAAATGGGACGAGCTAAAGAATCCAAAGTTGGCGGATGTTTGCATCAGTACCTCAGCAGCACCAACGTTCTTACCAGGCCACGAATTTCAAACTCAGGACTCCAAAGGAAACATTCGTAAATTTGACATGGTTGATGGTGGCGTTGCAGCCAATAACCCAACATTAGCAGCTATAACTCATGTGACGAAAGAAATGAGCTTATTGTGGCATAGAAATGAGCTATTAAACATAAAGCCCATGGAAACAAAAAGAATGTTGATCCTTTCATTAGGCACTGGTGCGCCTAAGAACGATGAGAAGTATAGCGCAGCGACGTCTTCAAAATGGGGCATGCTCGATTGGATCTACCACGGTGGAGCAGCTCCTATAGTCGACATTTTCAGCGATGCAAGCAATGATATGGTGGACTATCATATTTCGAGCATCTTCCAATCTTCAAATCATAAGAAGAATTATCTTCGGATTCAAGATGACACGTTGACGGGTGATGTATCGTCTGTGGATATTGCCACCAAGAGGAATTTACTGAAGCTGATCGATGTGGGAGAGAATTTACTGAAGAAGCCATTGTCGAGGGTGAATTTGGAGTCGGGAAACTTTGAACCTCTTGATGGGGAAGGGACTAATGAAGAGGCCCTTGCTGAATTTGCTAAAATGTTGTCGGATGAGAAAAAGCTACGATTGAGCCCTTGA
Protein sequence
MAPDFGKGKVITILSVDGGGIRGIIPGTILAFLESKLQELDGPDARIADYFDVIAGTSTGGLVTSMLTAPNKDNRPLYAAKDLTRFYMEHAPKIFPQRSHFLSSVVNFLGRVIGPKYDGKYLRSLIHELLGDTTLKQTLTQVIIPAFDIKRLQPVIFTTIDAKWDELKNPKLADVCISTSAAPTFLPGHEFQTQDSKGNIRKFDMVDGGVAANNPTLAAITHVTKEMSLLWHRNELLNIKPMETKRMLILSLGTGAPKNDEKYSAATSSKWGMLDWIYHGGAAPIVDIFSDASNDMVDYHISSIFQSSNHKKNYLRIQDDTLTGDVSSVDIATKRNLLKLIDVGENLLKKPLSRVNLESGNFEPLDGEGTNEEALAEFAKMLSDEKKLRLSP
Homology
BLAST of CmaCh02G005720 vs. ExPASy Swiss-Prot
Match:
A2YW91 (Patatin-like protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=PLP2 PE=3 SV=1)
HSP 1 Score: 437.2 bits (1123), Expect = 2.0e-121
Identity = 211/384 (54.95%), Postives = 287/384 (74.74%), Query Frame = 0
Query: 7 KGKVITILSVDGGGIRGIIPGTILAFLESKLQELDGPDARIADYFDVIAGTSTGGLVTSM 66
K K++T+LS+DGGG+RGIIP TILAFLE +LQ+LDGPDARIADYFDV+AGTSTGGL+T+M
Sbjct: 17 KVKMVTVLSIDGGGVRGIIPATILAFLEKELQKLDGPDARIADYFDVVAGTSTGGLLTAM 76
Query: 67 LTAPNKDNRPLYAAKDLTRFYMEHAPKIFPQRSHFLSSVVNFLGRVIGPKYDGKYLRSLI 126
LTAPN++NRPL+AA +L +FY+EH+P IFPQ++ LS + L V GPKYDGKYL SL+
Sbjct: 77 LTAPNENNRPLFAADELAKFYIEHSPSIFPQKNWVLSKIAGTLRMVSGPKYDGKYLHSLL 136
Query: 127 HELLGDTTLKQTLTQVIIPAFDIKRLQPVIFTTIDAKWDELKNPKLADVCISTSAAPTFL 186
E LGDT L + LT V+IP FDI LQP IF+ + K+ LKN L+D+ ISTSAAPTF
Sbjct: 137 REKLGDTRLDKALTNVVIPTFDIANLQPTIFSKFELKYKPLKNALLSDISISTSAAPTFF 196
Query: 187 PGHEFQTQDSKGNIRKFDMVDGGVAANNPTLAAITHVTKEMSLLWHRN-ELLNIKPMETK 246
P H F+T+D G R+F++VDGGVAANNPTL A++ V+K + L + + +KP E
Sbjct: 197 PAHYFETKDDNGQTREFNLVDGGVAANNPTLCAMSQVSKYIILEDKEDCDFFPVKPTEYG 256
Query: 247 RMLILSLGTGAPKNDEKYSAATSSKWGMLDWIYHGGAAPIVDIFSDASNDMVDYHISSIF 306
+ +++S+G G+ +D+KY A ++KWG+ +W+ G +API+D+F+ AS DMVD H+ +F
Sbjct: 257 KFMVISIGCGS-NHDQKYKAKDAAKWGIFNWLIKGSSAPIIDMFTSASADMVDIHLGVLF 316
Query: 307 QSSNHKKNYLRIQDDTLTGDVSSVDIATKRNLLKLIDVGENLLKKPLSRVNLESGNFEPL 366
+ +KNYLRIQ D LTG S+D +K N+ L+ +GE LL K +SRV+LE+G++ +
Sbjct: 317 SALQCEKNYLRIQYDQLTGSAGSIDDCSKENMDNLVKIGEMLLDKNVSRVDLETGHYVDV 376
Query: 367 DGEGTNEEALAEFAKMLSDEKKLR 390
GEGTN + LA+FAK LSDE++ R
Sbjct: 377 AGEGTNRDQLAKFAKQLSDERRRR 399
BLAST of CmaCh02G005720 vs. ExPASy Swiss-Prot
Match:
Q6ZJD3 (Patatin-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=PLP2 PE=3 SV=1)
HSP 1 Score: 437.2 bits (1123), Expect = 2.0e-121
Identity = 211/384 (54.95%), Postives = 287/384 (74.74%), Query Frame = 0
Query: 7 KGKVITILSVDGGGIRGIIPGTILAFLESKLQELDGPDARIADYFDVIAGTSTGGLVTSM 66
K K++T+LS+DGGG+RGIIP TILAFLE +LQ+LDGPDARIADYFDV+AGTSTGGL+T+M
Sbjct: 17 KVKMVTVLSIDGGGVRGIIPATILAFLEKELQKLDGPDARIADYFDVVAGTSTGGLLTAM 76
Query: 67 LTAPNKDNRPLYAAKDLTRFYMEHAPKIFPQRSHFLSSVVNFLGRVIGPKYDGKYLRSLI 126
LTAPN++NRPL+AA +L +FY+EH+P IFPQ++ LS + L V GPKYDGKYL SL+
Sbjct: 77 LTAPNENNRPLFAADELAKFYIEHSPSIFPQKNWVLSKIAGTLRMVSGPKYDGKYLHSLL 136
Query: 127 HELLGDTTLKQTLTQVIIPAFDIKRLQPVIFTTIDAKWDELKNPKLADVCISTSAAPTFL 186
E LGDT L + LT V+IP FDI LQP IF+ + K+ LKN L+D+ ISTSAAPTF
Sbjct: 137 REKLGDTRLDKALTNVVIPTFDIANLQPTIFSKFELKYKPLKNALLSDISISTSAAPTFF 196
Query: 187 PGHEFQTQDSKGNIRKFDMVDGGVAANNPTLAAITHVTKEMSLLWHRN-ELLNIKPMETK 246
P H F+T+D G R+F++VDGGVAANNPTL A++ V+K + L + + +KP E
Sbjct: 197 PAHYFETKDDNGQTREFNLVDGGVAANNPTLCAMSQVSKYIILEDKEDCDFFPVKPTEYG 256
Query: 247 RMLILSLGTGAPKNDEKYSAATSSKWGMLDWIYHGGAAPIVDIFSDASNDMVDYHISSIF 306
+ +++S+G G+ +D+KY A ++KWG+ +W+ G +API+D+F+ AS DMVD H+ +F
Sbjct: 257 KFMVISIGCGS-NHDQKYKAKDAAKWGIFNWLIKGSSAPIIDMFTSASADMVDIHLGVLF 316
Query: 307 QSSNHKKNYLRIQDDTLTGDVSSVDIATKRNLLKLIDVGENLLKKPLSRVNLESGNFEPL 366
+ +KNYLRIQ D LTG S+D +K N+ L+ +GE LL K +SRV+LE+G++ +
Sbjct: 317 SALQCEKNYLRIQYDQLTGSAGSIDDCSKENMDNLVKIGEMLLDKNVSRVDLETGHYVDV 376
Query: 367 DGEGTNEEALAEFAKMLSDEKKLR 390
GEGTN + LA+FAK LSDE++ R
Sbjct: 377 AGEGTNRDQLAKFAKQLSDERRRR 399
BLAST of CmaCh02G005720 vs. ExPASy Swiss-Prot
Match:
O23181 (Patatin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=PLP3 PE=2 SV=2)
HSP 1 Score: 436.0 bits (1120), Expect = 4.4e-121
Identity = 215/393 (54.71%), Postives = 297/393 (75.57%), Query Frame = 0
Query: 8 GKVITILSVDGGGIRGIIPGTILAFLESKLQELDGPDARIADYFDVIAGTSTGGLVTSML 67
G+++TILS+DGGGIRGIIPGTILA+LES+LQELDG +AR+ DYFDVI+GTSTGGL+ +ML
Sbjct: 32 GQLVTILSIDGGGIRGIIPGTILAYLESQLQELDGEEARLVDYFDVISGTSTGGLIVAML 91
Query: 68 TAPNK-------DNRPLYAAKDLTRFYMEHAPKIFPQ-RSHFLSSVVNFLGRVIGPKYDG 127
TA ++ NRPL+ AK++ FY++H+PKIFPQ R F + V GPK++G
Sbjct: 92 TAQDQSGGHSRNSNRPLFEAKEIVPFYLKHSPKIFPQPRGIFCGWGETIVRLVGGPKFNG 151
Query: 128 KYLRSLIHELLGDTTLKQTLTQVIIPAFDIKRLQPVIFTTIDAKWDELKNPKLADVCIST 187
KYL L+ LGDT L Q+LT V+IP FDIK+LQPVIF++ A ++ N KL+D+CIST
Sbjct: 152 KYLHDLVEGFLGDTKLTQSLTNVVIPCFDIKKLQPVIFSSYQAVNNQAMNAKLSDICIST 211
Query: 188 SAAPTFLPGHEFQTQDSKGNIRKFDMVDGGVAANNPTLAAITHVTKEMSLLWHRNELL-N 247
SAAPTF P H F +DS+G +F+++DGG+AANNPTL AI VTK+ + +N ++ +
Sbjct: 212 SAAPTFFPAHRFTNEDSEGIKHEFNLIDGGIAANNPTLCAIAEVTKQ---IIKKNPVMGD 271
Query: 248 IKPMETKRMLILSLGTGAPKNDEKYSAATSSKWGMLDWIYHGGAAPIVDIFSDASNDMVD 307
I P++ R L++S+GTG+ +N EKY+A +SKWG++ W++ G+ PI+D +S+A +DMVD
Sbjct: 272 ISPLDFTRFLVISIGTGSIRNQEKYNAKMASKWGLMCWVFESGSTPILDCYSEAIHDMVD 331
Query: 308 YHISSIFQSSNHKKNYLRIQDDTLTGDVSSVDIATKRNLLKLIDVGENLLKKPLSRVNLE 367
Y S +FQ+ +KNYLRI DD+L GD+ SVDI+T++N+ L++VGE LLKK +SRVNLE
Sbjct: 332 YQSSVVFQALRSEKNYLRIDDDSLKGDLGSVDISTEKNMEGLVEVGEALLKKRVSRVNLE 391
Query: 368 SGNFEPLDGEGTNEEALAEFAKMLSDEKKLRLS 392
SG+++P+ TNEEAL FAK+LS+E+KLR S
Sbjct: 392 SGHYQPISENVTNEEALKRFAKVLSEERKLRES 421
BLAST of CmaCh02G005720 vs. ExPASy Swiss-Prot
Match:
O48723 (Patatin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=PLP2 PE=1 SV=1)
HSP 1 Score: 430.3 bits (1105), Expect = 2.4e-119
Identity = 216/382 (56.54%), Postives = 281/382 (73.56%), Query Frame = 0
Query: 8 GKVITILSVDGGGIRGIIPGTILAFLESKLQELDGPDARIADYFDVIAGTSTGGLVTSML 67
G ++TILS+DGGGIRG+IP IL FLES+LQ+LDG +AR+ADYFDVIAGTSTGGLVT+ML
Sbjct: 16 GNLVTILSIDGGGIRGLIPAVILGFLESELQKLDGEEARLADYFDVIAGTSTGGLVTAML 75
Query: 68 TAPNKDNRPLYAAKDLTRFYMEHAPKIFPQRSHFLSSVVNFLGRVIGPKYDGKYLRSLIH 127
TAPNK+ RPL+AA ++ FY+E PKIFPQ S+ + + GPKYDGKYL LIH
Sbjct: 76 TAPNKEGRPLFAASEIKDFYLEQCPKIFPQDHFPFSAAKKLVKSLTGPKYDGKYLHQLIH 135
Query: 128 ELLGDTTLKQTLTQVIIPAFDIKRLQPVIFTTIDAKWDELKNPKLADVCISTSAAPTFLP 187
LGDT L QTLT V+IP FDIK LQP IF++ + K LK+ LAD+ ISTSAAPT+LP
Sbjct: 136 AKLGDTKLSQTLTNVVIPTFDIKHLQPTIFSSYEVKNHPLKDATLADIAISTSAAPTYLP 195
Query: 188 GHEFQTQDSKGNIRKFDMVDGGVAANNPTLAAITHVTKEMSLLWHRNELLNIKPMETKRM 247
H F+ +D GN ++++++DGGVAANNP L AI VT E+S ++ I+P + R
Sbjct: 196 AHFFKVEDLNGNAKEYNLIDGGVAANNPALLAIGEVTNEIS--GGSSDFFPIRPNDYGRF 255
Query: 248 LILSLGTGAPKNDEKYSAATSSKWGMLDWIYHGGAAPIVDIFSDASNDMVDYHISSIFQS 307
L+LSLGTG K +EK++A + WG+L+W+ H + PI+D FS AS+DMVD+H+S++F++
Sbjct: 256 LVLSLGTGNHKAEEKFNAKEVAGWGLLNWLTHDNSTPIIDAFSQASSDMVDFHLSAVFRA 315
Query: 308 SNHKKNYLRIQDDTLTGDVSSVDIATKRNLLKLIDVGENLLKKPLSRVNLESGNFEPLDG 367
+ + NY+RIQDDTLTGD +SVDIAT NL L G+ LLKKP++RVNL+SG E
Sbjct: 316 LHSEANYIRIQDDTLTGDAASVDIATVENLDILAKTGDELLKKPVARVNLDSGCNENA-Y 375
Query: 368 EGTNEEALAEFAKMLSDEKKLR 390
E TNE AL + A +LS EKK+R
Sbjct: 376 ETTNEHALIKLAGILSKEKKIR 394
BLAST of CmaCh02G005720 vs. ExPASy Swiss-Prot
Match:
B8AQW7 (Patatin-like protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=PLP1 PE=3 SV=1)
HSP 1 Score: 420.2 bits (1079), Expect = 2.5e-116
Identity = 202/389 (51.93%), Postives = 291/389 (74.81%), Query Frame = 0
Query: 3 PDFGKGKVITILSVDGGGIRGIIPGTILAFLESKLQELDGPDARIADYFDVIAGTSTGGL 62
P G+ +T+L++DGGGIRG+IPGTILAFLE++LQELDGPDAR+ADYFD IAGTSTGGL
Sbjct: 9 PASAPGQRVTLLAIDGGGIRGLIPGTILAFLEARLQELDGPDARLADYFDCIAGTSTGGL 68
Query: 63 VTSMLTAPNKDNRPLYAAKDLTRFYMEHAPKIFPQRSHFLSSVVNFLGRVIGPKYDGKYL 122
+T+ML AP RPL+AA D+ RFY+++ P+IFPQ+ +++ + L R P+Y+GKYL
Sbjct: 69 ITAMLAAPGDHGRPLFAASDINRFYLDNGPRIFPQKRCGMAAAMAALTR---PRYNGKYL 128
Query: 123 RSLIHELLGDTTLKQTLTQVIIPAFDIKRLQPVIFTTIDAKWDELKNPKLADVCISTSAA 182
+ I ++LG+T ++ TLT V+IP FD++ LQP IF+T DAK LKN L+D+CISTSAA
Sbjct: 129 QGKIRKMLGETRVRDTLTNVVIPTFDVRLLQPTIFSTYDAKSMPLKNALLSDICISTSAA 188
Query: 183 PTFLPGHEFQ-TQDSKGNIRKFDMVDGGVAANNPTLAAITHVTKEMSLLWHRNELLNIKP 242
PT+LP H FQ T D+ G +R+FD++DGGVAANNPT+ A+T +TK++ ++ + EL +KP
Sbjct: 189 PTYLPAHCFQTTDDATGKVREFDLIDGGVAANNPTMVAMTQITKKI-MVKDKEELYPVKP 248
Query: 243 METKRMLILSLGTGAPKNDEKYSAATSSKWGMLDWIYHGGAAPIVDIFSDASNDMVDYHI 302
+ + L+LSLGTG+ + Y+A S+WG++ W+ + G API+DIF AS+D+VD H
Sbjct: 249 SDCGKFLVLSLGTGSTSDQGMYTARQCSRWGIVRWLRNKGMAPIIDIFMAASSDLVDIHA 308
Query: 303 SSIFQSSNHKKNYLRIQDDTLTGDVSSVDIATKRNLLKLIDVGENLLKKPLSRVNLESGN 362
+ +FQS + +YLRIQD+TL GD ++VD AT+ N+ L+ +GE +L + +SRVN+E+G
Sbjct: 309 AVMFQSLHSDGDYLRIQDNTLHGDAATVDAATRDNMRALVGIGERMLAQRVSRVNVETGR 368
Query: 363 FEPLDGEGTNEEALAEFAKMLSDEKKLRL 391
+ + G G+N +AL FA+ LS+E++ RL
Sbjct: 369 YVEVPGAGSNADALRGFARQLSEERRARL 393
BLAST of CmaCh02G005720 vs. TAIR 10
Match:
AT4G37050.1 (PATATIN-like protein 4 )
HSP 1 Score: 436.0 bits (1120), Expect = 3.1e-122
Identity = 215/393 (54.71%), Postives = 297/393 (75.57%), Query Frame = 0
Query: 8 GKVITILSVDGGGIRGIIPGTILAFLESKLQELDGPDARIADYFDVIAGTSTGGLVTSML 67
G+++TILS+DGGGIRGIIPGTILA+LES+LQELDG +AR+ DYFDVI+GTSTGGL+ +ML
Sbjct: 32 GQLVTILSIDGGGIRGIIPGTILAYLESQLQELDGEEARLVDYFDVISGTSTGGLIVAML 91
Query: 68 TAPNK-------DNRPLYAAKDLTRFYMEHAPKIFPQ-RSHFLSSVVNFLGRVIGPKYDG 127
TA ++ NRPL+ AK++ FY++H+PKIFPQ R F + V GPK++G
Sbjct: 92 TAQDQSGGHSRNSNRPLFEAKEIVPFYLKHSPKIFPQPRGIFCGWGETIVRLVGGPKFNG 151
Query: 128 KYLRSLIHELLGDTTLKQTLTQVIIPAFDIKRLQPVIFTTIDAKWDELKNPKLADVCIST 187
KYL L+ LGDT L Q+LT V+IP FDIK+LQPVIF++ A ++ N KL+D+CIST
Sbjct: 152 KYLHDLVEGFLGDTKLTQSLTNVVIPCFDIKKLQPVIFSSYQAVNNQAMNAKLSDICIST 211
Query: 188 SAAPTFLPGHEFQTQDSKGNIRKFDMVDGGVAANNPTLAAITHVTKEMSLLWHRNELL-N 247
SAAPTF P H F +DS+G +F+++DGG+AANNPTL AI VTK+ + +N ++ +
Sbjct: 212 SAAPTFFPAHRFTNEDSEGIKHEFNLIDGGIAANNPTLCAIAEVTKQ---IIKKNPVMGD 271
Query: 248 IKPMETKRMLILSLGTGAPKNDEKYSAATSSKWGMLDWIYHGGAAPIVDIFSDASNDMVD 307
I P++ R L++S+GTG+ +N EKY+A +SKWG++ W++ G+ PI+D +S+A +DMVD
Sbjct: 272 ISPLDFTRFLVISIGTGSIRNQEKYNAKMASKWGLMCWVFESGSTPILDCYSEAIHDMVD 331
Query: 308 YHISSIFQSSNHKKNYLRIQDDTLTGDVSSVDIATKRNLLKLIDVGENLLKKPLSRVNLE 367
Y S +FQ+ +KNYLRI DD+L GD+ SVDI+T++N+ L++VGE LLKK +SRVNLE
Sbjct: 332 YQSSVVFQALRSEKNYLRIDDDSLKGDLGSVDISTEKNMEGLVEVGEALLKKRVSRVNLE 391
Query: 368 SGNFEPLDGEGTNEEALAEFAKMLSDEKKLRLS 392
SG+++P+ TNEEAL FAK+LS+E+KLR S
Sbjct: 392 SGHYQPISENVTNEEALKRFAKVLSEERKLRES 421
BLAST of CmaCh02G005720 vs. TAIR 10
Match:
AT2G26560.1 (phospholipase A 2A )
HSP 1 Score: 430.3 bits (1105), Expect = 1.7e-120
Identity = 216/382 (56.54%), Postives = 281/382 (73.56%), Query Frame = 0
Query: 8 GKVITILSVDGGGIRGIIPGTILAFLESKLQELDGPDARIADYFDVIAGTSTGGLVTSML 67
G ++TILS+DGGGIRG+IP IL FLES+LQ+LDG +AR+ADYFDVIAGTSTGGLVT+ML
Sbjct: 16 GNLVTILSIDGGGIRGLIPAVILGFLESELQKLDGEEARLADYFDVIAGTSTGGLVTAML 75
Query: 68 TAPNKDNRPLYAAKDLTRFYMEHAPKIFPQRSHFLSSVVNFLGRVIGPKYDGKYLRSLIH 127
TAPNK+ RPL+AA ++ FY+E PKIFPQ S+ + + GPKYDGKYL LIH
Sbjct: 76 TAPNKEGRPLFAASEIKDFYLEQCPKIFPQDHFPFSAAKKLVKSLTGPKYDGKYLHQLIH 135
Query: 128 ELLGDTTLKQTLTQVIIPAFDIKRLQPVIFTTIDAKWDELKNPKLADVCISTSAAPTFLP 187
LGDT L QTLT V+IP FDIK LQP IF++ + K LK+ LAD+ ISTSAAPT+LP
Sbjct: 136 AKLGDTKLSQTLTNVVIPTFDIKHLQPTIFSSYEVKNHPLKDATLADIAISTSAAPTYLP 195
Query: 188 GHEFQTQDSKGNIRKFDMVDGGVAANNPTLAAITHVTKEMSLLWHRNELLNIKPMETKRM 247
H F+ +D GN ++++++DGGVAANNP L AI VT E+S ++ I+P + R
Sbjct: 196 AHFFKVEDLNGNAKEYNLIDGGVAANNPALLAIGEVTNEIS--GGSSDFFPIRPNDYGRF 255
Query: 248 LILSLGTGAPKNDEKYSAATSSKWGMLDWIYHGGAAPIVDIFSDASNDMVDYHISSIFQS 307
L+LSLGTG K +EK++A + WG+L+W+ H + PI+D FS AS+DMVD+H+S++F++
Sbjct: 256 LVLSLGTGNHKAEEKFNAKEVAGWGLLNWLTHDNSTPIIDAFSQASSDMVDFHLSAVFRA 315
Query: 308 SNHKKNYLRIQDDTLTGDVSSVDIATKRNLLKLIDVGENLLKKPLSRVNLESGNFEPLDG 367
+ + NY+RIQDDTLTGD +SVDIAT NL L G+ LLKKP++RVNL+SG E
Sbjct: 316 LHSEANYIRIQDDTLTGDAASVDIATVENLDILAKTGDELLKKPVARVNLDSGCNENA-Y 375
Query: 368 EGTNEEALAEFAKMLSDEKKLR 390
E TNE AL + A +LS EKK+R
Sbjct: 376 ETTNEHALIKLAGILSKEKKIR 394
BLAST of CmaCh02G005720 vs. TAIR 10
Match:
AT4G37070.2 (Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein )
HSP 1 Score: 416.8 bits (1070), Expect = 2.0e-116
Identity = 200/382 (52.36%), Postives = 281/382 (73.56%), Query Frame = 0
Query: 8 GKVITILSVDGGGIRGIIPGTILAFLESKLQELDGPDARIADYFDVIAGTSTGGLVTSML 67
G ++TILS+DGGG+RGII G ILAFLE +LQELDG +AR+ADYFDVIAGTSTGGLVT+ML
Sbjct: 16 GSLVTILSLDGGGVRGIIAGVILAFLEKQLQELDGEEARLADYFDVIAGTSTGGLVTAML 75
Query: 68 TAPNKDNRPLYAAKDLTRFYMEHAPKIFPQRSHFLSSVVNFLGRVIGPKYDGKYLRSLIH 127
T P++ RP +AAKD+ FY+EH PKIFPQ + L+ + + GPKY GKYLR+L+
Sbjct: 76 TVPDETGRPHFAAKDIVPFYLEHCPKIFPQPTGVLALLPKLPKLLSGPKYSGKYLRNLLS 135
Query: 128 ELLGDTTLKQTLTQVIIPAFDIKRLQPVIFTTIDAKWDELKNPKLADVCISTSAAPTFLP 187
+LLG+T L QTLT ++IP FDIK+LQP IF++ D + K++D+CI TSAAPTF P
Sbjct: 136 KLLGETRLHQTLTNIVIPTFDIKKLQPTIFSSYQLLVDPSLDVKVSDICIGTSAAPTFFP 195
Query: 188 GHEFQTQDSKGNIRKFDMVDGGVAANNPTLAAITHVTKEMSLLWHRNELLNIKPMETKRM 247
H F +DS+GN +F++VDG V ANNPTL A+T V+K+ ++ + ++ +KP+ R
Sbjct: 196 PHYFSNEDSQGNKTEFNLVDGAVTANNPTLVAMTAVSKQ--IVKNNPDMGKLKPLGFDRF 255
Query: 248 LILSLGTGAPKNDEKYSAATSSKWGMLDWIYHGGAAPIVDIFSDASNDMVDYHISSIFQS 307
L++S+GTG+ K +EKYSA ++KWG++ W+Y G+ PI+DI ++S DM+ YH S +F++
Sbjct: 256 LVISIGTGSTKREEKYSAKKAAKWGIISWLYDDGSTPILDITMESSRDMIHYHSSVVFKA 315
Query: 308 SNHKKNYLRIQDDTLTGDVSSVDIATKRNLLKLIDVGENLLKKPLSRVNLESGNFEPLDG 367
+ YLRI DDTL GDVS++D+ATK NL L +GE +L + ++N+++G +EP+
Sbjct: 316 LQSEDKYLRIDDDTLEGDVSTMDLATKSNLENLQKIGEKMLTNRVMQMNIDTGVYEPVAE 375
Query: 368 EGTNEEALAEFAKMLSDEKKLR 390
TN+E L +AK+LSDE+KLR
Sbjct: 376 NITNDEQLKRYAKILSDERKLR 395
BLAST of CmaCh02G005720 vs. TAIR 10
Match:
AT4G37060.1 (PATATIN-like protein 5 )
HSP 1 Score: 403.7 bits (1036), Expect = 1.7e-112
Identity = 193/382 (50.52%), Postives = 276/382 (72.25%), Query Frame = 0
Query: 8 GKVITILSVDGGGIRGIIPGTILAFLESKLQELDGPDARIADYFDVIAGTSTGGLVTSML 67
G ++TILS+DGGG+RGII G ILA+LE +LQELDG R+ADYFDVIAGTSTGGLVT+ML
Sbjct: 16 GTLVTILSLDGGGVRGIIAGVILAYLEKQLQELDGEHVRVADYFDVIAGTSTGGLVTAML 75
Query: 68 TAPNKDNRPLYAAKDLTRFYMEHAPKIFPQRSHFLSSVVNFLGRVIGPKYDGKYLRSLIH 127
TAP+++ RP +AAK++ FY+EH PKIFPQ + L+ + + GPKY G YLR+ +
Sbjct: 76 TAPDENGRPRFAAKEIVPFYLEHCPKIFPQPTGVLALLPKLPKLLSGPKYSGNYLRTTLG 135
Query: 128 ELLGDTTLKQTLTQVIIPAFDIKRLQPVIFTTIDAKWDELKNPKLADVCISTSAAPTFLP 187
+LLG+T L+QTLT V+IP FDIK LQP IF++ A D + K++D+CI TSAAPT+ P
Sbjct: 136 KLLGETKLRQTLTNVVIPTFDIKTLQPTIFSSYQALTDPSLDVKVSDICIGTSAAPTYFP 195
Query: 188 GHEFQTQDSKGNIRKFDMVDGGVAANNPTLAAITHVTKEMSLLWHRNELLNIKPMETKRM 247
+ F +DS+G R F++VDGGV ANNPTL A+T VTK+ ++ + ++ + P+ +
Sbjct: 196 PYYFSNEDSQGKTRHFNLVDGGVTANNPTLVAMTAVTKQ--IVNNNPDMGTLNPLGYDQF 255
Query: 248 LILSLGTGAPKNDEKYSAATSSKWGMLDWIYHGGAAPIVDIFSDASNDMVDYHISSIFQS 307
L++S+GTG+ K +E+YSA ++KWG++ W+Y G PI+DI ++S D+V YH S +F++
Sbjct: 256 LVISIGTGSAKKEERYSAKKAAKWGIISWLYEDGTTPILDITFESSRDIVHYHSSVVFKA 315
Query: 308 SNHKKNYLRIQDDTLTGDVSSVDIATKRNLLKLIDVGENLLKKPLSRVNLESGNFEPLDG 367
+ YLRI DDTL GD S++D++TK NL LI +GE +L + ++N+++G +EP
Sbjct: 316 LQSEDKYLRIDDDTLEGDASTLDLSTKSNLENLIKLGEKMLTNRVMQMNIDTGTYEPAAE 375
Query: 368 EGTNEEALAEFAKMLSDEKKLR 390
N+E L FAK+LS+E+KLR
Sbjct: 376 NINNDEQLKRFAKILSEERKLR 395
BLAST of CmaCh02G005720 vs. TAIR 10
Match:
AT4G37070.3 (Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein )
HSP 1 Score: 399.1 bits (1024), Expect = 4.2e-111
Identity = 191/368 (51.90%), Postives = 269/368 (73.10%), Query Frame = 0
Query: 8 GKVITILSVDGGGIRGIIPGTILAFLESKLQELDGPDARIADYFDVIAGTSTGGLVTSML 67
G ++TILS+DGGG+RGII G ILAFLE +LQELDG +AR+ADYFDVIAGTSTGGLVT+ML
Sbjct: 16 GSLVTILSLDGGGVRGIIAGVILAFLEKQLQELDGEEARLADYFDVIAGTSTGGLVTAML 75
Query: 68 TAPNKDNRPLYAAKDLTRFYMEHAPKIFPQRSHFLSSVVNFLGRVIGPKYDGKYLRSLIH 127
T P++ RP +AAKD+ FY+EH PKIFPQ + L+ + + GPKY GKYLR+L+
Sbjct: 76 TVPDETGRPHFAAKDIVPFYLEHCPKIFPQPTGVLALLPKLPKLLSGPKYSGKYLRNLLS 135
Query: 128 ELLGDTTLKQTLTQVIIPAFDIKRLQPVIFTTIDAKWDELKNPKLADVCISTSAAPTFLP 187
+LLG+T L QTLT ++IP FDIK+LQP IF++ D + K++D+CI TSAAPTF P
Sbjct: 136 KLLGETRLHQTLTNIVIPTFDIKKLQPTIFSSYQLLVDPSLDVKVSDICIGTSAAPTFFP 195
Query: 188 GHEFQTQDSKGNIRKFDMVDGGVAANNPTLAAITHVTKEMSLLWHRNELLNIKPMETKRM 247
H F +DS+GN +F++VDG V ANNPTL A+T V+K+ ++ + ++ +KP+ R
Sbjct: 196 PHYFSNEDSQGNKTEFNLVDGAVTANNPTLVAMTAVSKQ--IVKNNPDMGKLKPLGFDRF 255
Query: 248 LILSLGTGAPKNDEKYSAATSSKWGMLDWIYHGGAAPIVDIFSDASNDMVDYHISSIFQS 307
L++S+GTG+ K +EKYSA ++KWG++ W+Y G+ PI+DI ++S DM+ YH S +F++
Sbjct: 256 LVISIGTGSTKREEKYSAKKAAKWGIISWLYDDGSTPILDITMESSRDMIHYHSSVVFKA 315
Query: 308 SNHKKNYLRIQDDTLTGDVSSVDIATKRNLLKLIDVGENLLKKPLSRVNLESGNFEPLDG 367
+ YLRI DDTL GDVS++D+ATK NL L +GE +L + ++N+++G +EP+
Sbjct: 316 LQSEDKYLRIDDDTLEGDVSTMDLATKSNLENLQKIGEKMLTNRVMQMNIDTGVYEPVAE 375
Query: 368 EGTNEEAL 376
TN+E L
Sbjct: 376 NITNDEQL 381
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
A2YW91 | 2.0e-121 | 54.95 | Patatin-like protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=PLP2 PE=3 SV=1 | [more] |
Q6ZJD3 | 2.0e-121 | 54.95 | Patatin-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=PLP2 PE=3 SV=... | [more] |
O23181 | 4.4e-121 | 54.71 | Patatin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=PLP3 PE=2 SV=2 | [more] |
O48723 | 2.4e-119 | 56.54 | Patatin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=PLP2 PE=1 SV=1 | [more] |
B8AQW7 | 2.5e-116 | 51.93 | Patatin-like protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=PLP1 PE=3 SV=1 | [more] |