CmaCh02G005660 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAACCCTTGTTTCTTGGCGGGAGGTAATCATCATCGACCTCATTGTTGGACCCTAGTTTCCACTTCGCACTTCGATTGTATAAGCACTTCACAATTTCTGGAAGGGGAATCCGCTGCTTGGAGCGGACCATATCACGCCCTTTTGCGTCTAACGCCATCTCCCTCTCTCTCCCCCGCAGCGACAAGCCCAAAATTTCACTCCCTCATGCAAAGCAGCTCCTTCAACCCAATCTCGAATTCCCTTCAATTTCAACGCCCATGGATTTTCCCCGAGACCCACTTCACCCTTGGTATTAGGGTTCCAAATAAGCCTAGATTCCGCCTTACACCTCGAATTGTTATCAGAACTTCAAGAACTCGGTACAGAGCCGATGAAGGCCTTGATGATACACCCGGTCCCAGCACCCCGGTGCGCTTCCCCGTCGTCCTTCTCCGGTCCGGTAGGGTCTCTCAGTACGTGTGGGATGGGTTTTCTCTACAGTTGGTCGGCGTTGATGGTGGTGCTTCATCTGTGTCTTTTGATTTCGTTGATGGGTTTCGAACGATGTACAGGGCATGTGGTTTGGCTGTTAAGGGTTTTTTTATTCCCAAGAATGTTAGTGAGCATTATGTACTTTATGTCAAATGGAAGTTCTTGCATCGGGTTTTCAGTTCCGCTCTGCAGGTTATTGCTACTCAGGTCAGTGGATGAAACTTAATTGTTTAATTTATTCGAGTTTTCTAGTTGCGAGAAGAAATTAGTCTGATAGAGTTTAAGGATTAGACTCATAGTTTTATTTAACTATAGACCATTTGATGTTTGTTCATATTCTTCTTAGTTTATTTCTTATAGTTGGTTTCTGTTGGGACAACATTTTAGCTTGAGCACATCCATATAGCAGAACTTTGAAGTGTTTTTTGGTGTGTGGATTGAATTGTTTACCTGATGAAAGTATTTGGAGTGTTAATTTTTATGGCTCTGCACTATAGTTGTTAGCTCTGATTTTATTGATGTCCACCTAATGGTTTAATGATAAGTATTCTCTTCAAATTATAAGGAAAATTCTTATTGATAGGCAATGTTTCGGGCTATAGGAGTTGGGCGCACTCGTTCGCTAGCATCTGCAGCAGCTCTGAATTGGGTCCTGAAGGATGGACTTGGACGGTTAAGTCGGTGTATTTACACTGCTACGATAGCATCTTCATTCGATACAAATTTAAAGGTTTGCTTCTGTTTGTTAATTTCTTATGAACAAGGAGTTTTATTTGAAGGTCATCCTTGAAAGTGCAGTGTTTGTGTTTCCATTGTATCTTATTGTTTGATGAACAATTCTTTTTTTCTTTTTAATGTTTCTCGTTTCAAGAGAGTCAGGTTTTCGACAGCGATTCTATTCAGTTTAAGCATTGGAGTTGAGTTGCTGACTCCAGCATTTCCTCAGTACTTCTTGCTTCTTGCATCGATTGCAAACATCGTGAAACAAATAAGTCTTGGATGCTACTTATCAACGGCTGTAAGGGTTCACAATTTTATCTAGTCCAATTTTTGTGCATTATATGTTTGACATACTTTCTTCACGAAAAATCGATCACCTCTTTATGATAATAACCAATATTTCTTTCTGTTGGTAAGAGGTGTTTGTTGGATTACTCTGTGTTGTTCGTTTGTCGAGAAACGTTACTCCAAGTTGTTGATCACTTAAGGTTTGGAATGACTTTCAAAGTGCTTAGAAAAAGGTTTTTAAGACTCAATTTTCCAAATATCCATTTGGTTCATTTATGAAGTTTCTGGAAGACTCAGTTTCAAAAGCTCTAATTATGCTGGTTAAGCATTCCTAAAAGTTTCATTTCAATAGATATTATTCTTTTTGCTTCACGACTTCGGATTTTATTAGTGTCGTCTTATAGTTCTCACTCTTTGTAATCAGTCTGCTGTTCATAGAAGTTTTGCAGTGACAGATAACCTTGGTGAAGTTTCTGCCAAGGCACAGGTTGGCTATAATCCTTCCTGAAACAGATCACAATTTTTCGGTATCCTTTACGTTCATTCAACTATCCATTTTGTGCAGATTCAATCAGTGTGCTTTGATAATCTTGGTCTCATACTCGCCGTCCTTCTGAACTTCTTGTCCAAGAATGATCAAAGGTTTTTTTTCCCCTGATTGTTCTTTAGACTAACGTTTGTTCTTAAATAAGTTACAAATACTCAGAGATTATCAATTCATGTCTGTTTTATCATGATGTACATGTTTTCTCGTTTTTGGAATTTATCATTTCAAAGGTTTTCTAACTCATGATTTTTTTTTTTATGTTAGATTGCAAGCAGCTTTACCTTTTGTAGTTTACCCCATTTTTGCTGCAATGGATCTTTTCGGAACATATCAAGGGCTTAAACATGTCCATTTGCAAACACTAACGAAGGTAGGTTTTGTGTTATTCAACTTTCCACAATATTTGGAGGCTAGGTATGTAACGGCCCAAGCCCTCTTTAGCAAATATTGTCATCTTTGGGTTTTTCTTTTCGGGCTTTCTCTCAAGGTTTTTAAAACGCGTATGCTAGGGAGAGGTTTCCACACTCTCATAAAGAATATTTGTTCTCCTCTCCAACTGATGTGGGATCTCACAATCCATCCCCCTTCGAGGTCCAGCGTCCTCGCTGGCACTCGTTCCCTTTGGTCCAATCGATGTGGGACCCCCAATTCACCCCCTTCAGGGCCCAACATCCTTGCTGGCACACCACCTCATGTCCACCCTCCTTCGAGGCTCAGCCTCATCGCTGACACATCGTCCGGTGTCTGGCTTTGATACTATTTGTAACGACCCAAGCCCACTGCTAGTAGATATTGTCCTCTTTGAACTTTCCTTTTCGGACTTCCCCTCAAGATTTTTAAAAAGTGCCTACTAGGGAGAGGTTTTCACACCCTTATAAAGAATGTTTCGTTCTCCTCCCCAACCGATGTGGGATCTCACAAGTTGAGTGTTCGAATTTGCTGTTTTGTGCTTACTTGATGGAGCAAAATTGTCTTTTATAAGATGTTTGCTTAATGGAACTAATGATTTATTTATTCTCTCTTCACTACTTGAGTTCGGAATGACTTGAGTTTTGATAGAGTGCTTTTTAGGTGAAACACTTTCTTCCTATGTTGTGATGCTATGAAAAAAAAAAAAAAAAAACAAACACTTTTTACTATTCCAAAAGTCATAGTAAACTCAATTGAAGTGAATTTTTCATCTCAACCGTTAATTTCTTCATGTTCAGGATCGACTTGAGATCATATTATGCACTTGGATCGAGCAAGGATACGTGCCTACACCAGCCGAAGTAAGTGAGATGGAAGGAATTGATTTACTATGCAGAAAGGGTGAGAGTCTTGTCTATGTATTGATTCCTCTATACATAGAAGGTTAACCAATCGTAGACTTATGTTGAACTACAGTTAATGAATATAACTTCAATATTCAGGTAAGGTTTCATGGCCAATCAGAATAGGTTGCTTGAATCTGGAGTCTCAAATACCAAAGTTGTCAATGCTTGCAATGCGATCTGTATGTAACAAGGACTATTATTTTATATGCATGGATGTCTTCTGCCGGGGCTTAACAACAAATACAGTGAGTAGATATACTTCGATTAACCTTTACGAGCTGTCCATATTTCTTTTGCTCACACTTTTCTTTTTCGAAATCGTAGCACGGTATTCTTCTTTGTCTCCGTGAAGGGGCTCGTGCAGCAGATATCAGCATGGGGTTATTGCAGGTAGTAGAAAATTGCTTAAATTCATTTTCATCTGTTTGGTTTGCGCTTGATTTGAATATGATATCTATTGTTCGAAAAGTTTCAGTTGGGTCGGGTGATTTAGTGTAACAACCTAAACCCACAGCGAGCAAATATTGTTTTCTTTGGACTTCCCTTCAAGGTTTTTAAAATGCGTCTTCTAGAGAGAGTTTCTATCGTTTGTAACAGTCCAAGTCCATCGCTAGCAGATATTGTCCTCTTTGAGTTTTCCCTTTCAAGTTTCCACCAAGATTTTTAAAATGCGACTATTAGGGAGAGGTTTCCACACCTTTGTAAAGAATGTTTTGTTTCCCTCTCCAACCGATACTCAGTGTCCTCGCTGGCATTCGTTCCCCTTTTCAATCGAGGTAAGATCTTACATTTAGTTAAATCTGTCAAACGACCCTTGATTTACCAAGTGTTTCATAATTTTTTTATTTTGTTTTTCTTTCAATAACATATTTTTTTTTCAAATGCATTAAGGAAACATGGTAAAAGTCATGTAAAAGACAACGGTCAACTTTTGGTGAGGTTAATGATGTTTAGAGATATAACAAAACCAGAAAGACCAAAGCGAAACATTTAAAATCAGAAGGATGAAAGCATTAAGGAAATCTCTTCGAAACGGGATGTCACAACATTCTTTTAGTCCTATGCTTTATATTCAGCCGTTCTTTGATGATTTTGAAAGTCTGATGTAACGAGTCTTGACTTGAATAGGCATGCTTCATCCGCAAAGTGATTGTATCGAACACGAGCGTTTGGGACAAAGAAATCATGAAAGGTATTAACTTTTCAGATGCAATGGCGAAGGAGTGGGTTGGTTTGGTTGGGGATAGCAAGAAATATGCAGAAGAAAATGGTTGTAATTTGCTTAAACAAATGTCAAGCTTAGGATGGGCTGTCAAGAACGTTCTGCTGAGTACAAATGAGCAAATACGATACAGCTTTGTTGATGACTGAGGGAGCTTGTTTCGAAGGACCAAGATGCTGATTAACCCAAACTTATTACTCATCATTTTTTTCTTTTACCCTTATAAGGATACTGAACTCTGGGGATAAATTTAGAAATTGTTAATTATGTATTTTTTATATATAAAAAAAACTATAATTGTTTACACCCAATAAAATTATGGAAAAATATTAATTTCTAT AAACCCTTGTTTCTTGGCGGGAGGTAATCATCATCGACCTCATTGTTGGACCCTAGTTTCCACTTCGCACTTCGATTGTATAAGCACTTCACAATTTCTGGAAGGGGAATCCGCTGCTTGGAGCGGACCATATCACGCCCTTTTGCGTCTAACGCCATCTCCCTCTCTCTCCCCCGCAGCGACAAGCCCAAAATTTCACTCCCTCATGCAAAGCAGCTCCTTCAACCCAATCTCGAATTCCCTTCAATTTCAACGCCCATGGATTTTCCCCGAGACCCACTTCACCCTTGGTATTAGGGTTCCAAATAAGCCTAGATTCCGCCTTACACCTCGAATTGTTATCAGAACTTCAAGAACTCGGTACAGAGCCGATGAAGGCCTTGATGATACACCCGGTCCCAGCACCCCGGTGCGCTTCCCCGTCGTCCTTCTCCGGTCCGGTAGGGTCTCTCAGTACGTGTGGGATGGGTTTTCTCTACAGTTGGTCGGCGTTGATGGTGGTGCTTCATCTGTGTCTTTTGATTTCGTTGATGGGTTTCGAACGATGTACAGGGCATGTGGTTTGGCTGTTAAGGGTTTTTTTATTCCCAAGAATGTTAGTGAGCATTATGTACTTTATGTCAAATGGAAGTTCTTGCATCGGGTTTTCAGTTCCGCTCTGCAGGTTATTGCTACTCAGGCAATGTTTCGGGCTATAGGAGTTGGGCGCACTCGTTCGCTAGCATCTGCAGCAGCTCTGAATTGGGTCCTGAAGGATGGACTTGGACGGTTAAGTCGGTGTATTTACACTGCTACGATAGCATCTTCATTCGATACAAATTTAAAGAGAGTCAGGTTTTCGACAGCGATTCTATTCAGTTTAAGCATTGGAGTTGAGTTGCTGACTCCAGCATTTCCTCAGTACTTCTTGCTTCTTGCATCGATTGCAAACATCGTGAAACAAATAAGTCTTGGATGCTACTTATCAACGGCTTCTGCTGTTCATAGAAGTTTTGCAGTGACAGATAACCTTGGTGAAGTTTCTGCCAAGGCACAGATTCAATCAGTGTGCTTTGATAATCTTGGTCTCATACTCGCCGTCCTTCTGAACTTCTTGTCCAAGAATGATCAAAGATTGCAAGCAGCTTTACCTTTTGTAGTTTACCCCATTTTTGCTGCAATGGATCTTTTCGGAACATATCAAGGGCTTAAACATGATCGACTTGAGATCATATTATGCACTTGGATCGAGCAAGGATACGTGCCTACACCAGCCGAAGTAAGTGAGATGGAAGGAATTGATTTACTATGCAGAAAGGGTAAGGTTTCATGGCCAATCAGAATAGGTTGCTTGAATCTGGAGTCTCAAATACCAAAGTTGTCAATGCTTGCAATGCGATCTGTATGTAACAAGGACTATTATTTTATATGCATGGATGTCTTCTGCCGGGGCTTAACAACAAATACACACGGTATTCTTCTTTGTCTCCGTGAAGGGGCTCGTGCAGCAGATATCAGCATGGGGTTATTGCAGGCATGCTTCATCCGCAAAGTGATTGTATCGAACACGAGCGTTTGGGACAAAGAAATCATGAAAGGTATTAACTTTTCAGATGCAATGGCGAAGGAGTGGGTTGGTTTGGTTGGGGATAGCAAGAAATATGCAGAAGAAAATGGTTGTAATTTGCTTAAACAAATGTCAAGCTTAGGATGGGCTGTCAAGAACGTTCTGCTGAGTACAAATGAGCAAATACGATACAGCTTTGTTGATGACTGAGGGAGCTTGTTTCGAAGGACCAAGATGCTGATTAACCCAAACTTATTACTCATCATTTTTTTCTTTTACCCTTATAAGGATACTGAACTCTGGGGATAAATTTAGAAATTGTTAATTATGTATTTTTTATATATAAAAAAAACTATAATTGTTTACACCCAATAAAATTATGGAAAAATATTAATTTCTAT ATGCAAAGCAGCTCCTTCAACCCAATCTCGAATTCCCTTCAATTTCAACGCCCATGGATTTTCCCCGAGACCCACTTCACCCTTGGTATTAGGGTTCCAAATAAGCCTAGATTCCGCCTTACACCTCGAATTGTTATCAGAACTTCAAGAACTCGGTACAGAGCCGATGAAGGCCTTGATGATACACCCGGTCCCAGCACCCCGGTGCGCTTCCCCGTCGTCCTTCTCCGGTCCGGTAGGGTCTCTCAGTACGTGTGGGATGGGTTTTCTCTACAGTTGGTCGGCGTTGATGGTGGTGCTTCATCTGTGTCTTTTGATTTCGTTGATGGGTTTCGAACGATGTACAGGGCATGTGGTTTGGCTGTTAAGGGTTTTTTTATTCCCAAGAATGTTAGTGAGCATTATGTACTTTATGTCAAATGGAAGTTCTTGCATCGGGTTTTCAGTTCCGCTCTGCAGGTTATTGCTACTCAGGCAATGTTTCGGGCTATAGGAGTTGGGCGCACTCGTTCGCTAGCATCTGCAGCAGCTCTGAATTGGGTCCTGAAGGATGGACTTGGACGGTTAAGTCGGTGTATTTACACTGCTACGATAGCATCTTCATTCGATACAAATTTAAAGAGAGTCAGGTTTTCGACAGCGATTCTATTCAGTTTAAGCATTGGAGTTGAGTTGCTGACTCCAGCATTTCCTCAGTACTTCTTGCTTCTTGCATCGATTGCAAACATCGTGAAACAAATAAGTCTTGGATGCTACTTATCAACGGCTTCTGCTGTTCATAGAAGTTTTGCAGTGACAGATAACCTTGGTGAAGTTTCTGCCAAGGCACAGATTCAATCAGTGTGCTTTGATAATCTTGGTCTCATACTCGCCGTCCTTCTGAACTTCTTGTCCAAGAATGATCAAAGATTGCAAGCAGCTTTACCTTTTGTAGTTTACCCCATTTTTGCTGCAATGGATCTTTTCGGAACATATCAAGGGCTTAAACATGATCGACTTGAGATCATATTATGCACTTGGATCGAGCAAGGATACGTGCCTACACCAGCCGAAGTAAGTGAGATGGAAGGAATTGATTTACTATGCAGAAAGGGTAAGGTTTCATGGCCAATCAGAATAGGTTGCTTGAATCTGGAGTCTCAAATACCAAAGTTGTCAATGCTTGCAATGCGATCTGTATGTAACAAGGACTATTATTTTATATGCATGGATGTCTTCTGCCGGGGCTTAACAACAAATACACACGGTATTCTTCTTTGTCTCCGTGAAGGGGCTCGTGCAGCAGATATCAGCATGGGGTTATTGCAGGCATGCTTCATCCGCAAAGTGATTGTATCGAACACGAGCGTTTGGGACAAAGAAATCATGAAAGGTATTAACTTTTCAGATGCAATGGCGAAGGAGTGGGTTGGTTTGGTTGGGGATAGCAAGAAATATGCAGAAGAAAATGGTTGTAATTTGCTTAAACAAATGTCAAGCTTAGGATGGGCTGTCAAGAACGTTCTGCTGAGTACAAATGAGCAAATACGATACAGCTTTGTTGATGACTGA MQSSSFNPISNSLQFQRPWIFPETHFTLGIRVPNKPRFRLTPRIVIRTSRTRYRADEGLDDTPGPSTPVRFPVVLLRSGRVSQYVWDGFSLQLVGVDGGASSVSFDFVDGFRTMYRACGLAVKGFFIPKNVSEHYVLYVKWKFLHRVFSSALQVIATQAMFRAIGVGRTRSLASAAALNWVLKDGLGRLSRCIYTATIASSFDTNLKRVRFSTAILFSLSIGVELLTPAFPQYFLLLASIANIVKQISLGCYLSTASAVHRSFAVTDNLGEVSAKAQIQSVCFDNLGLILAVLLNFLSKNDQRLQAALPFVVYPIFAAMDLFGTYQGLKHDRLEIILCTWIEQGYVPTPAEVSEMEGIDLLCRKGKVSWPIRIGCLNLESQIPKLSMLAMRSVCNKDYYFICMDVFCRGLTTNTHGILLCLREGARAADISMGLLQACFIRKVIVSNTSVWDKEIMKGINFSDAMAKEWVGLVGDSKKYAEENGCNLLKQMSSLGWAVKNVLLSTNEQIRYSFVDD Homology
BLAST of CmaCh02G005660 vs. ExPASy Swiss-Prot
Match: Q67YT8 (Protein root UVB sensitive 4 OS=Arabidopsis thaliana OX=3702 GN=RUS4 PE=2 SV=1) HSP 1 Score: 528.5 bits (1360), Expect = 8.6e-149 Identity = 286/482 (59.34%), Postives = 352/482 (73.03%), Query Frame = 0
BLAST of CmaCh02G005660 vs. ExPASy Swiss-Prot
Match: Q93YU2 (Protein root UVB sensitive 6 OS=Arabidopsis thaliana OX=3702 GN=RUS6 PE=2 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 1.4e-26 Identity = 83/262 (31.68%), Postives = 136/262 (51.91%), Query Frame = 0
BLAST of CmaCh02G005660 vs. ExPASy Swiss-Prot
Match: Q84JB8 (Protein root UVB sensitive 3 OS=Arabidopsis thaliana OX=3702 GN=RUS3 PE=2 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 1.5e-20 Identity = 92/392 (23.47%), Postives = 173/392 (44.13%), Query Frame = 0
BLAST of CmaCh02G005660 vs. ExPASy Swiss-Prot
Match: Q7X6P3 (Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RUS1 PE=1 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 3.4e-20 Identity = 76/267 (28.46%), Postives = 133/267 (49.81%), Query Frame = 0
BLAST of CmaCh02G005660 vs. ExPASy Swiss-Prot
Match: Q86K80 (RUS family member 1 OS=Dictyostelium discoideum OX=44689 GN=rusf1 PE=3 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 3.4e-20 Identity = 67/242 (27.69%), Postives = 132/242 (54.55%), Query Frame = 0
BLAST of CmaCh02G005660 vs. TAIR 10
Match: AT2G23470.1 (Protein of unknown function, DUF647 ) HSP 1 Score: 528.5 bits (1360), Expect = 6.1e-150 Identity = 286/482 (59.34%), Postives = 352/482 (73.03%), Query Frame = 0
BLAST of CmaCh02G005660 vs. TAIR 10
Match: AT5G49820.1 (Protein of unknown function, DUF647 ) HSP 1 Score: 122.5 bits (306), Expect = 1.0e-27 Identity = 83/262 (31.68%), Postives = 136/262 (51.91%), Query Frame = 0
BLAST of CmaCh02G005660 vs. TAIR 10
Match: AT1G13770.1 (Protein of unknown function, DUF647 ) HSP 1 Score: 102.4 bits (254), Expect = 1.1e-21 Identity = 92/392 (23.47%), Postives = 173/392 (44.13%), Query Frame = 0
BLAST of CmaCh02G005660 vs. TAIR 10
Match: AT3G45890.1 (Protein of unknown function, DUF647 ) HSP 1 Score: 101.3 bits (251), Expect = 2.4e-21 Identity = 76/267 (28.46%), Postives = 133/267 (49.81%), Query Frame = 0
BLAST of CmaCh02G005660 vs. TAIR 10
Match: AT5G01510.1 (Protein of unknown function, DUF647 ) HSP 1 Score: 100.5 bits (249), Expect = 4.1e-21 Identity = 82/297 (27.61%), Postives = 141/297 (47.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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