CmaCh02G005470 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh02G005470
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Patatin
Location	Cma_Chr02: 3036638 .. 3039317 (-)
RNA-Seq Expression	CmaCh02G005470
Synteny	CmaCh02G005470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCATGGCAGCTGATCTTCCAAAACCGAAGATGACAACTATTTTGAGTATTGATGGAGGTGGCATTAGAGGCATCATTCCTTCAACTATACTAGCTTTTTTCGAGTCCAAACTTCAGGTAATGCACATTTTAGCTGTGAGGAGAATGAAACACCCTTTATAAGGATATGGAAAGCCCAAAGAGGATAATATTTGTTAGCGTGGGCTTGAATAATTTCTATATTGATATAAAAAATGATTGTTTTTTGGTTAGGAATTGGACGGCCCAGATGCAAGAATAGCAGATTACTTCGATTTAATTGCTGGAACAAGTACAGGTGGTTTAATTGCGGCCATGCTTACAGCTCCCAACAAAGACAAGAAGCCTTTATATGCAGCCAAAGATCTAACCAACTTCTTTTTGGAACATTCTCCAAAAATTTTCCCCCAAAAAAAGTTCGTACGTCCATACATCTTTGCTTGAATGACTTTGTAATTTTTAGATATAATGAGTAAATGAGTGTTTTGTTGTGTGTCAGCTATTTATTCAGCTCAGTCACCAATTTATTTGGTAAAGTTTTGGGGCCGAAGTACGATGGACAATACTTGAGGACATTGCTGAATGACCAACTTAGGGACACAACTCTTAAGGAAACGTTGACAAATGTTGTTATTCCTGCGTTTGACATCAATCATCTTCACCCTGTGATCTTCTCCAATGTTAAGGTATGAGAAGTTGGTTGGTTTTCACTCTTGATGAAACAAATAACTGAAATAGAATAAAATACATTCTAAAAATACTTTTTAATCATAATGTTCTTTTTGGACTTTCGATTTAAGAATCTCCTCAAGGTTTTTAAAACGCGTCTACTAAGAATTTTTCAATATATGACTATCATTATTACAGCTCAAGCTCACCGCTATTGTCATTTTTGGATTTTCCTTTTTGAGTTTCCCCTCAAAGTTTTTAAAACGCATCTACTAGGGGAGGTTTTCACACCTTAGGCTTTCCCTTTCAAGCTAACTCTCAAGGTTGCATCGGAGGTTTTCACACCCTTAGGCTTTCCCTTTCGAAGTTTCTCTCAAGGTTTTTAAAATGCGTTTACTAGGGAGAGGTTTCCACACCCTTAAAAGAGTGTTTCGTTCTCCTCCCCAACTGATGTGAGATCTCACAATCCACCCCCTTCGGAGCCCAACATTCTCGTTAGCACTTGTTCTCTTCTTCAATCGATGTGGGACACCCCAATCCACCCCTGTCTACTAGAAAGAGGTTTCCACACCCTTATAAAAGGTGTTTTCCTCCCCAACCGATCTGAAGCCCAACGTCCTCATAGGCACTTGTTCCCTTCTCCAATCGATGTGGGACCCCTTAATCCACTTATTTTGGGGCCCAACGTCCTTGTTGGCACACCGCCTCGTGTCCACCCCCCTTCAAAGTTTAATCTCCTCGCTGGCACATCGCTTGGTGTCTGGCTCTGATACCATTTATAACAGCTCAAGCCCACAATTAACAAATGTCCTCTTTAGGCTTTTCTTTCAAGCTTCCTCTCAAAGTTTTTAAAACTCGTCTACTAGGAAGAGATTTCCACACCCTTATAAAGAATGTTTCGTTCTCCTCCCCAACCAACGTAGAATCTCACAGTCACATTCCATGATTCCAACCTAATGCTTAATATTCGAATTTATTTAGTTATCACAGAATTCATCCGGTTGAAACTTTATGATTAAATTGGAACATGCAGGCAAGGTGGGATGAATTGAAGAATCCAAAGTTGGCAGATGTGTGCATCAGTACATCTGCAGCACCAACTTACTTGCCAGCATATGAATTTCAAACAAACAACTCCATGGGAAATACTCACGTTTTCAATATGGTTGATGGTGGAGTTGCAGCAAACAACCCAGTAAGTATTTTCTAATTGAACTCTTGCACCTCATTCACATTTCCTCACAAAATTTGATTGTATAGACCCTGGCTGCCATAACCCAAGTATCCAAAGGGACAAACATTTGTGAACCCTTCAAGACGAAGCCCATGGAAACAGAAAGGATGCTAGTCCTTTCTTTAGGCACTGGAGCAGCTAAGAATGAAGGAAAGTACAGTGCTAGCAAAGCTGCAAAATGGGGCATGTTTAATTGGGTTTATGACAATGGGGCCACTCCAATAGTTGATATCTTCAGCGATGCAAGTTCCGATATGGTCGACTTTCATGTTGGTTCTTTCTTTCAATCCTTCCGTTGCCACAAAAACTATCTTCGCATTCAGGTAGCCCTCACACACTGTGACCTTGACGAACTTTAAGAGAATTGTCAGTAGACTTAATACAGGAGAACTAAGGAGAATTGGTAACAGTGGCTAGTCAGTGCTTTCTAAACTATAATGTGTCTTTTACTTATTTCGACATAATTCGGATTGATTTGGGTTGGACAGGAAACGGATTTGAGTGGGGAAGTAGCATTAGTTGATATTGCAACAGAGCAAAACTTGAAGAATCTGACGAAGGTGGGGAAGGAGCTGTTAAAGAGGGCGGTGTCGAGGGTAAACTTAGAAACTGGAGAATACGAGGCAGTTGATGGAGAAGGTACAAATGAAGAAGCCCTCACACAATTTGCCAAAATGCTTTCTGAACAGAGAAAGCTTCAACTCAGCCCTTGAATGACTCGGTCTCTTTCTATTTTTTATTTAACTAAAATATATTATCA

mRNA sequence

CCATGGCAGCTGATCTTCCAAAACCGAAGATGACAACTATTTTGAGTATTGATGGAGGTGGCATTAGAGGCATCATTCCTTCAACTATACTAGCTTTTTTCGAGTCCAAACTTCAGGAATTGGACGGCCCAGATGCAAGAATAGCAGATTACTTCGATTTAATTGCTGGAACAAGTACAGGTGGTTTAATTGCGGCCATGCTTACAGCTCCCAACAAAGACAAGAAGCCTTTATATGCAGCCAAAGATCTAACCAACTTCTTTTTGGAACATTCTCCAAAAATTTTCCCCCAAAAAAACTATTTATTCAGCTCAGTCACCAATTTATTTGGTAAAGTTTTGGGGCCGAAGTACGATGGACAATACTTGAGGACATTGCTGAATGACCAACTTAGGGACACAACTCTTAAGGAAACGTTGACAAATGTTGTTATTCCTGCGTTTGACATCAATCATCTTCACCCTGTGATCTTCTCCAATGTTAAGGCAAGGTGGGATGAATTGAAGAATCCAAAGTTGGCAGATGTGTGCATCAGTACATCTGCAGCACCAACTTACTTGCCAGCATATGAATTTCAAACAAACAACTCCATGGGAAATACTCACGTTTTCAATATGGTTGATGGTGGAGTTGCAGCAAACAACCCAACCCTGGCTGCCATAACCCAAGTATCCAAAGGGACAAACATTTGTGAACCCTTCAAGACGAAGCCCATGGAAACAGAAAGGATGCTAGTCCTTTCTTTAGGCACTGGAGCAGCTAAGAATGAAGGAAAGTACAGTGCTAGCAAAGCTGCAAAATGGGGCATGTTTAATTGGGTTTATGACAATGGGGCCACTCCAATAGTTGATATCTTCAGCGATGCAAGTTCCGATATGGTCGACTTTCATGTTGGTTCTTTCTTTCAATCCTTCCGTTGCCACAAAAACTATCTTCGCATTCAGGAAACGGATTTGAGTGGGGAAGTAGCATTAGTTGATATTGCAACAGAGCAAAACTTGAAGAATCTGACGAAGGTGGGGAAGGAGCTGTTAAAGAGGGCGGTGTCGAGGGTAAACTTAGAAACTGGAGAATACGAGGCAGTTGATGGAGAAGGTACAAATGAAGAAGCCCTCACACAATTTGCCAAAATGCTTTCTGAACAGAGAAAGCTTCAACTCAGCCCTTGAATGACTCGGTCTCTTTCTATTTTTTATTTAACTAAAATATATTATCA

Coding sequence (CDS)

ATGGCAGCTGATCTTCCAAAACCGAAGATGACAACTATTTTGAGTATTGATGGAGGTGGCATTAGAGGCATCATTCCTTCAACTATACTAGCTTTTTTCGAGTCCAAACTTCAGGAATTGGACGGCCCAGATGCAAGAATAGCAGATTACTTCGATTTAATTGCTGGAACAAGTACAGGTGGTTTAATTGCGGCCATGCTTACAGCTCCCAACAAAGACAAGAAGCCTTTATATGCAGCCAAAGATCTAACCAACTTCTTTTTGGAACATTCTCCAAAAATTTTCCCCCAAAAAAACTATTTATTCAGCTCAGTCACCAATTTATTTGGTAAAGTTTTGGGGCCGAAGTACGATGGACAATACTTGAGGACATTGCTGAATGACCAACTTAGGGACACAACTCTTAAGGAAACGTTGACAAATGTTGTTATTCCTGCGTTTGACATCAATCATCTTCACCCTGTGATCTTCTCCAATGTTAAGGCAAGGTGGGATGAATTGAAGAATCCAAAGTTGGCAGATGTGTGCATCAGTACATCTGCAGCACCAACTTACTTGCCAGCATATGAATTTCAAACAAACAACTCCATGGGAAATACTCACGTTTTCAATATGGTTGATGGTGGAGTTGCAGCAAACAACCCAACCCTGGCTGCCATAACCCAAGTATCCAAAGGGACAAACATTTGTGAACCCTTCAAGACGAAGCCCATGGAAACAGAAAGGATGCTAGTCCTTTCTTTAGGCACTGGAGCAGCTAAGAATGAAGGAAAGTACAGTGCTAGCAAAGCTGCAAAATGGGGCATGTTTAATTGGGTTTATGACAATGGGGCCACTCCAATAGTTGATATCTTCAGCGATGCAAGTTCCGATATGGTCGACTTTCATGTTGGTTCTTTCTTTCAATCCTTCCGTTGCCACAAAAACTATCTTCGCATTCAGGAAACGGATTTGAGTGGGGAAGTAGCATTAGTTGATATTGCAACAGAGCAAAACTTGAAGAATCTGACGAAGGTGGGGAAGGAGCTGTTAAAGAGGGCGGTGTCGAGGGTAAACTTAGAAACTGGAGAATACGAGGCAGTTGATGGAGAAGGTACAAATGAAGAAGCCCTCACACAATTTGCCAAAATGCTTTCTGAACAGAGAAAGCTTCAACTCAGCCCTTGA

Protein sequence

MAADLPKPKMTTILSIDGGGIRGIIPSTILAFFESKLQELDGPDARIADYFDLIAGTSTGGLIAAMLTAPNKDKKPLYAAKDLTNFFLEHSPKIFPQKNYLFSSVTNLFGKVLGPKYDGQYLRTLLNDQLRDTTLKETLTNVVIPAFDINHLHPVIFSNVKARWDELKNPKLADVCISTSAAPTYLPAYEFQTNNSMGNTHVFNMVDGGVAANNPTLAAITQVSKGTNICEPFKTKPMETERMLVLSLGTGAAKNEGKYSASKAAKWGMFNWVYDNGATPIVDIFSDASSDMVDFHVGSFFQSFRCHKNYLRIQETDLSGEVALVDIATEQNLKNLTKVGKELLKRAVSRVNLETGEYEAVDGEGTNEEALTQFAKMLSEQRKLQLSP

Homology

[Close]

BLAST of CmaCh02G005470 vs. ExPASy Swiss-Prot
Match: A2YW91 (Patatin-like protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=PLP2 PE=3 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 3.7e-120
Identity = 210/382 (54.97%), Postives = 279/382 (73.04%), Query Frame = 0


Query: 7   KPKMTTILSIDGGGIRGIIPSTILAFFESKLQELDGPDARIADYFDLIAGTSTGGLIAAM 66
           K KM T+LSIDGGG+RGIIP+TILAF E +LQ+LDGPDARIADYFD++AGTSTGGL+ AM
Sbjct: 17  KVKMVTVLSIDGGGVRGIIPATILAFLEKELQKLDGPDARIADYFDVVAGTSTGGLLTAM 76

Query: 67  LTAPNKDKKPLYAAKDLTNFFLEHSPKIFPQKNYLFSSVTNLFGKVLGPKYDGQYLRTLL 126
           LTAPN++ +PL+AA +L  F++EHSP IFPQKN++ S +      V GPKYDG+YL +LL
Sbjct: 77  LTAPNENNRPLFAADELAKFYIEHSPSIFPQKNWVLSKIAGTLRMVSGPKYDGKYLHSLL 136

Query: 127 NDQLRDTTLKETLTNVVIPAFDINHLHPVIFSNVKARWDELKNPKLADVCISTSAAPTYL 186
            ++L DT L + LTNVVIP FDI +L P IFS  + ++  LKN  L+D+ ISTSAAPT+ 
Sbjct: 137 REKLGDTRLDKALTNVVIPTFDIANLQPTIFSKFELKYKPLKNALLSDISISTSAAPTFF 196

Query: 187 PAYEFQTNNSMGNTHVFNMVDGGVAANNPTLAAITQVSK-----GTNICEPFKTKPMETE 246
           PA+ F+T +  G T  FN+VDGGVAANNPTL A++QVSK         C+ F  KP E  
Sbjct: 197 PAHYFETKDDNGQTREFNLVDGGVAANNPTLCAMSQVSKYIILEDKEDCDFFPVKPTEYG 256

Query: 247 RMLVLSLGTGAAKNEGKYSASKAAKWGMFNWVYDNGATPIVDIFSDASSDMVDFHVGSFF 306
           + +V+S+G G + ++ KY A  AAKWG+FNW+    + PI+D+F+ AS+DMVD H+G  F
Sbjct: 257 KFMVISIGCG-SNHDQKYKAKDAAKWGIFNWLIKGSSAPIIDMFTSASADMVDIHLGVLF 316

Query: 307 QSFRCHKNYLRIQETDLSGEVALVDIATEQNLKNLTKVGKELLKRAVSRVNLETGEYEAV 366
            + +C KNYLRIQ   L+G    +D  +++N+ NL K+G+ LL + VSRV+LETG Y  V
Sbjct: 317 SALQCEKNYLRIQYDQLTGSAGSIDDCSKENMDNLVKIGEMLLDKNVSRVDLETGHYVDV 376

Query: 367 DGEGTNEEALTQFAKMLSEQRK 384
            GEGTN + L +FAK LS++R+
Sbjct: 377 AGEGTNRDQLAKFAKQLSDERR 397

[Close]

BLAST of CmaCh02G005470 vs. ExPASy Swiss-Prot
Match: Q6ZJD3 (Patatin-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=PLP2 PE=3 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 3.7e-120
Identity = 210/382 (54.97%), Postives = 279/382 (73.04%), Query Frame = 0


Query: 7   KPKMTTILSIDGGGIRGIIPSTILAFFESKLQELDGPDARIADYFDLIAGTSTGGLIAAM 66
           K KM T+LSIDGGG+RGIIP+TILAF E +LQ+LDGPDARIADYFD++AGTSTGGL+ AM
Sbjct: 17  KVKMVTVLSIDGGGVRGIIPATILAFLEKELQKLDGPDARIADYFDVVAGTSTGGLLTAM 76

Query: 67  LTAPNKDKKPLYAAKDLTNFFLEHSPKIFPQKNYLFSSVTNLFGKVLGPKYDGQYLRTLL 126
           LTAPN++ +PL+AA +L  F++EHSP IFPQKN++ S +      V GPKYDG+YL +LL
Sbjct: 77  LTAPNENNRPLFAADELAKFYIEHSPSIFPQKNWVLSKIAGTLRMVSGPKYDGKYLHSLL 136

Query: 127 NDQLRDTTLKETLTNVVIPAFDINHLHPVIFSNVKARWDELKNPKLADVCISTSAAPTYL 186
            ++L DT L + LTNVVIP FDI +L P IFS  + ++  LKN  L+D+ ISTSAAPT+ 
Sbjct: 137 REKLGDTRLDKALTNVVIPTFDIANLQPTIFSKFELKYKPLKNALLSDISISTSAAPTFF 196

Query: 187 PAYEFQTNNSMGNTHVFNMVDGGVAANNPTLAAITQVSK-----GTNICEPFKTKPMETE 246
           PA+ F+T +  G T  FN+VDGGVAANNPTL A++QVSK         C+ F  KP E  
Sbjct: 197 PAHYFETKDDNGQTREFNLVDGGVAANNPTLCAMSQVSKYIILEDKEDCDFFPVKPTEYG 256

Query: 247 RMLVLSLGTGAAKNEGKYSASKAAKWGMFNWVYDNGATPIVDIFSDASSDMVDFHVGSFF 306
           + +V+S+G G + ++ KY A  AAKWG+FNW+    + PI+D+F+ AS+DMVD H+G  F
Sbjct: 257 KFMVISIGCG-SNHDQKYKAKDAAKWGIFNWLIKGSSAPIIDMFTSASADMVDIHLGVLF 316

Query: 307 QSFRCHKNYLRIQETDLSGEVALVDIATEQNLKNLTKVGKELLKRAVSRVNLETGEYEAV 366
            + +C KNYLRIQ   L+G    +D  +++N+ NL K+G+ LL + VSRV+LETG Y  V
Sbjct: 317 SALQCEKNYLRIQYDQLTGSAGSIDDCSKENMDNLVKIGEMLLDKNVSRVDLETGHYVDV 376

Query: 367 DGEGTNEEALTQFAKMLSEQRK 384
            GEGTN + L +FAK LS++R+
Sbjct: 377 AGEGTNRDQLAKFAKQLSDERR 397

[Close]

BLAST of CmaCh02G005470 vs. ExPASy Swiss-Prot
Match: O23181 (Patatin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=PLP3 PE=2 SV=2)

HSP 1 Score: 401.0 bits (1029), Expect = 1.6e-110
Identity = 205/392 (52.30%), Postives = 280/392 (71.43%), Query Frame = 0


Query: 9   KMTTILSIDGGGIRGIIPSTILAFFESKLQELDGPDARIADYFDLIAGTSTGGLIAAMLT 68
           ++ TILSIDGGGIRGIIP TILA+ ES+LQELDG +AR+ DYFD+I+GTSTGGLI AMLT
Sbjct: 33  QLVTILSIDGGGIRGIIPGTILAYLESQLQELDGEEARLVDYFDVISGTSTGGLIVAMLT 92

Query: 69  APNK-------DKKPLYAAKDLTNFFLEHSPKIFPQKNYLF----SSVTNLFGKVLGPKY 128
           A ++         +PL+ AK++  F+L+HSPKIFPQ   +F     ++  L G   GPK+
Sbjct: 93  AQDQSGGHSRNSNRPLFEAKEIVPFYLKHSPKIFPQPRGIFCGWGETIVRLVG---GPKF 152

Query: 129 DGQYLRTLLNDQLRDTTLKETLTNVVIPAFDINHLHPVIFSNVKARWDELKNPKLADVCI 188
           +G+YL  L+   L DT L ++LTNVVIP FDI  L PVIFS+ +A  ++  N KL+D+CI
Sbjct: 153 NGKYLHDLVEGFLGDTKLTQSLTNVVIPCFDIKKLQPVIFSSYQAVNNQAMNAKLSDICI 212

Query: 189 STSAAPTYLPAYEFQTNNSMGNTHVFNMVDGGVAANNPTLAAITQVSKGTNICEPF--KT 248
           STSAAPT+ PA+ F   +S G  H FN++DGG+AANNPTL AI +V+K      P     
Sbjct: 213 STSAAPTFFPAHRFTNEDSEGIKHEFNLIDGGIAANNPTLCAIAEVTKQIIKKNPVMGDI 272

Query: 249 KPMETERMLVLSLGTGAAKNEGKYSASKAAKWGMFNWVYDNGATPIVDIFSDASSDMVDF 308
            P++  R LV+S+GTG+ +N+ KY+A  A+KWG+  WV+++G+TPI+D +S+A  DMVD+
Sbjct: 273 SPLDFTRFLVISIGTGSIRNQEKYNAKMASKWGLMCWVFESGSTPILDCYSEAIHDMVDY 332

Query: 309 HVGSFFQSFRCHKNYLRIQETDLSGEVALVDIATEQNLKNLTKVGKELLKRAVSRVNLET 368
                FQ+ R  KNYLRI +  L G++  VDI+TE+N++ L +VG+ LLK+ VSRVNLE+
Sbjct: 333 QSSVVFQALRSEKNYLRIDDDSLKGDLGSVDISTEKNMEGLVEVGEALLKKRVSRVNLES 392

Query: 369 GEYEAVDGEGTNEEALTQFAKMLSEQRKLQLS 388
           G Y+ +    TNEEAL +FAK+LSE+RKL+ S
Sbjct: 393 GHYQPISENVTNEEALKRFAKVLSEERKLRES 421

[Close]

BLAST of CmaCh02G005470 vs. ExPASy Swiss-Prot
Match: O48723 (Patatin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=PLP2 PE=1 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 1.0e-109
Identity = 203/378 (53.70%), Postives = 272/378 (71.96%), Query Frame = 0


Query: 10  MTTILSIDGGGIRGIIPSTILAFFESKLQELDGPDARIADYFDLIAGTSTGGLIAAMLTA 69
           + TILSIDGGGIRG+IP+ IL F ES+LQ+LDG +AR+ADYFD+IAGTSTGGL+ AMLTA
Sbjct: 18  LVTILSIDGGGIRGLIPAVILGFLESELQKLDGEEARLADYFDVIAGTSTGGLVTAMLTA 77

Query: 70  PNKDKKPLYAAKDLTNFFLEHSPKIFPQKNYLFSSVTNLFGKVLGPKYDGQYLRTLLNDQ 129
           PNK+ +PL+AA ++ +F+LE  PKIFPQ ++ FS+   L   + GPKYDG+YL  L++ +
Sbjct: 78  PNKEGRPLFAASEIKDFYLEQCPKIFPQDHFPFSAAKKLVKSLTGPKYDGKYLHQLIHAK 137

Query: 130 LRDTTLKETLTNVVIPAFDINHLHPVIFSNVKARWDELKNPKLADVCISTSAAPTYLPAY 189
           L DT L +TLTNVVIP FDI HL P IFS+ + +   LK+  LAD+ ISTSAAPTYLPA+
Sbjct: 138 LGDTKLSQTLTNVVIPTFDIKHLQPTIFSSYEVKNHPLKDATLADIAISTSAAPTYLPAH 197

Query: 190 EFQTNNSMGNTHVFNMVDGGVAANNPTLAAITQVSK--GTNICEPFKTKPMETERMLVLS 249
            F+  +  GN   +N++DGGVAANNP L AI +V+        + F  +P +  R LVLS
Sbjct: 198 FFKVEDLNGNAKEYNLIDGGVAANNPALLAIGEVTNEISGGSSDFFPIRPNDYGRFLVLS 257

Query: 250 LGTGAAKNEGKYSASKAAKWGMFNWVYDNGATPIVDIFSDASSDMVDFHVGSFFQSFRCH 309
           LGTG  K E K++A + A WG+ NW+  + +TPI+D FS ASSDMVDFH+ + F++    
Sbjct: 258 LGTGNHKAEEKFNAKEVAGWGLLNWLTHDNSTPIIDAFSQASSDMVDFHLSAVFRALHSE 317

Query: 310 KNYLRIQETDLSGEVALVDIATEQNLKNLTKVGKELLKRAVSRVNLETGEYEAVDGEGTN 369
            NY+RIQ+  L+G+ A VDIAT +NL  L K G ELLK+ V+RVNL++G  E    E TN
Sbjct: 318 ANYIRIQDDTLTGDAASVDIATVENLDILAKTGDELLKKPVARVNLDSGCNENA-YETTN 377

Query: 370 EEALTQFAKMLSEQRKLQ 386
           E AL + A +LS+++K++
Sbjct: 378 EHALIKLAGILSKEKKIR 394

[Close]

BLAST of CmaCh02G005470 vs. ExPASy Swiss-Prot
Match: O23179 (Patatin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=PLP1 PE=1 SV=2)

HSP 1 Score: 390.2 bits (1001), Expect = 2.7e-107
Identity = 193/378 (51.06%), Postives = 268/378 (70.90%), Query Frame = 0


Query: 10  MTTILSIDGGGIRGIIPSTILAFFESKLQELDGPDARIADYFDLIAGTSTGGLIAAMLTA 69
           + TILS+DGGG+RGII   ILAF E +LQELDG +AR+ADYFD+IAGTSTGGL+ AMLT 
Sbjct: 18  LVTILSLDGGGVRGIIAGVILAFLEKQLQELDGEEARLADYFDVIAGTSTGGLVTAMLTV 77

Query: 70  PNKDKKPLYAAKDLTNFFLEHSPKIFPQKNYLFSSVTNLFGKVLGPKYDGQYLRTLLNDQ 129
           P++  +P +AAKD+  F+LEH PKIFPQ   + + +  L   + GPKY G+YLR LL+  
Sbjct: 78  PDETGRPHFAAKDIVPFYLEHCPKIFPQPTGVLALLPKLPKLLSGPKYSGKYLRNLLSKL 137

Query: 130 LRDTTLKETLTNVVIPAFDINHLHPVIFSNVKARWDELKNPKLADVCISTSAAPTYLPAY 189
           L +T L +TLTN+VIP FDI  L P IFS+ +   D   + K++D+CI TSAAPT+ P +
Sbjct: 138 LGETRLHQTLTNIVIPTFDIKKLQPTIFSSYQLLVDPSLDVKVSDICIGTSAAPTFFPPH 197

Query: 190 EFQTNNSMGNTHVFNMVDGGVAANNPTLAAITQVSKG--TNICEPFKTKPMETERMLVLS 249
            F   +S GN   FN+VDG V ANNPTL A+T VSK    N  +  K KP+  +R LV+S
Sbjct: 198 YFSNEDSQGNKTEFNLVDGAVTANNPTLVAMTAVSKQIVKNNPDMGKLKPLGFDRFLVIS 257

Query: 250 LGTGAAKNEGKYSASKAAKWGMFNWVYDNGATPIVDIFSDASSDMVDFHVGSFFQSFRCH 309
           +GTG+ K E KYSA KAAKWG+ +W+YD+G+TPI+DI  ++S DM+ +H    F++ +  
Sbjct: 258 IGTGSTKREEKYSAKKAAKWGIISWLYDDGSTPILDITMESSRDMIHYHSSVVFKALQSE 317

Query: 310 KNYLRIQETDLSGEVALVDIATEQNLKNLTKVGKELLKRAVSRVNLETGEYEAVDGEGTN 369
             YLRI +  L G+V+ +D+AT+ NL+NL K+G+++L   V ++N++TG YE V    TN
Sbjct: 318 DKYLRIDDDTLEGDVSTMDLATKSNLENLQKIGEKMLTNRVMQMNIDTGVYEPVAENITN 377

Query: 370 EEALTQFAKMLSEQRKLQ 386
           +E L ++AK+LS++RKL+
Sbjct: 378 DEQLKRYAKILSDERKLR 395

[Close]

BLAST of CmaCh02G005470 vs. TAIR 10
Match: AT4G37050.1 (PATATIN-like protein 4 )

HSP 1 Score: 401.0 bits (1029), Expect = 1.1e-111
Identity = 205/392 (52.30%), Postives = 280/392 (71.43%), Query Frame = 0


Query: 9   KMTTILSIDGGGIRGIIPSTILAFFESKLQELDGPDARIADYFDLIAGTSTGGLIAAMLT 68
           ++ TILSIDGGGIRGIIP TILA+ ES+LQELDG +AR+ DYFD+I+GTSTGGLI AMLT
Sbjct: 33  QLVTILSIDGGGIRGIIPGTILAYLESQLQELDGEEARLVDYFDVISGTSTGGLIVAMLT 92

Query: 69  APNK-------DKKPLYAAKDLTNFFLEHSPKIFPQKNYLF----SSVTNLFGKVLGPKY 128
           A ++         +PL+ AK++  F+L+HSPKIFPQ   +F     ++  L G   GPK+
Sbjct: 93  AQDQSGGHSRNSNRPLFEAKEIVPFYLKHSPKIFPQPRGIFCGWGETIVRLVG---GPKF 152

Query: 129 DGQYLRTLLNDQLRDTTLKETLTNVVIPAFDINHLHPVIFSNVKARWDELKNPKLADVCI 188
           +G+YL  L+   L DT L ++LTNVVIP FDI  L PVIFS+ +A  ++  N KL+D+CI
Sbjct: 153 NGKYLHDLVEGFLGDTKLTQSLTNVVIPCFDIKKLQPVIFSSYQAVNNQAMNAKLSDICI 212

Query: 189 STSAAPTYLPAYEFQTNNSMGNTHVFNMVDGGVAANNPTLAAITQVSKGTNICEPF--KT 248
           STSAAPT+ PA+ F   +S G  H FN++DGG+AANNPTL AI +V+K      P     
Sbjct: 213 STSAAPTFFPAHRFTNEDSEGIKHEFNLIDGGIAANNPTLCAIAEVTKQIIKKNPVMGDI 272

Query: 249 KPMETERMLVLSLGTGAAKNEGKYSASKAAKWGMFNWVYDNGATPIVDIFSDASSDMVDF 308
            P++  R LV+S+GTG+ +N+ KY+A  A+KWG+  WV+++G+TPI+D +S+A  DMVD+
Sbjct: 273 SPLDFTRFLVISIGTGSIRNQEKYNAKMASKWGLMCWVFESGSTPILDCYSEAIHDMVDY 332

Query: 309 HVGSFFQSFRCHKNYLRIQETDLSGEVALVDIATEQNLKNLTKVGKELLKRAVSRVNLET 368
                FQ+ R  KNYLRI +  L G++  VDI+TE+N++ L +VG+ LLK+ VSRVNLE+
Sbjct: 333 QSSVVFQALRSEKNYLRIDDDSLKGDLGSVDISTEKNMEGLVEVGEALLKKRVSRVNLES 392

Query: 369 GEYEAVDGEGTNEEALTQFAKMLSEQRKLQLS 388
           G Y+ +    TNEEAL +FAK+LSE+RKL+ S
Sbjct: 393 GHYQPISENVTNEEALKRFAKVLSEERKLRES 421

[Close]

BLAST of CmaCh02G005470 vs. TAIR 10
Match: AT2G26560.1 (phospholipase A 2A )

HSP 1 Score: 398.3 bits (1022), Expect = 7.2e-111
Identity = 203/378 (53.70%), Postives = 272/378 (71.96%), Query Frame = 0


Query: 10  MTTILSIDGGGIRGIIPSTILAFFESKLQELDGPDARIADYFDLIAGTSTGGLIAAMLTA 69
           + TILSIDGGGIRG+IP+ IL F ES+LQ+LDG +AR+ADYFD+IAGTSTGGL+ AMLTA
Sbjct: 18  LVTILSIDGGGIRGLIPAVILGFLESELQKLDGEEARLADYFDVIAGTSTGGLVTAMLTA 77

Query: 70  PNKDKKPLYAAKDLTNFFLEHSPKIFPQKNYLFSSVTNLFGKVLGPKYDGQYLRTLLNDQ 129
           PNK+ +PL+AA ++ +F+LE  PKIFPQ ++ FS+   L   + GPKYDG+YL  L++ +
Sbjct: 78  PNKEGRPLFAASEIKDFYLEQCPKIFPQDHFPFSAAKKLVKSLTGPKYDGKYLHQLIHAK 137

Query: 130 LRDTTLKETLTNVVIPAFDINHLHPVIFSNVKARWDELKNPKLADVCISTSAAPTYLPAY 189
           L DT L +TLTNVVIP FDI HL P IFS+ + +   LK+  LAD+ ISTSAAPTYLPA+
Sbjct: 138 LGDTKLSQTLTNVVIPTFDIKHLQPTIFSSYEVKNHPLKDATLADIAISTSAAPTYLPAH 197

Query: 190 EFQTNNSMGNTHVFNMVDGGVAANNPTLAAITQVSK--GTNICEPFKTKPMETERMLVLS 249
            F+  +  GN   +N++DGGVAANNP L AI +V+        + F  +P +  R LVLS
Sbjct: 198 FFKVEDLNGNAKEYNLIDGGVAANNPALLAIGEVTNEISGGSSDFFPIRPNDYGRFLVLS 257

Query: 250 LGTGAAKNEGKYSASKAAKWGMFNWVYDNGATPIVDIFSDASSDMVDFHVGSFFQSFRCH 309
           LGTG  K E K++A + A WG+ NW+  + +TPI+D FS ASSDMVDFH+ + F++    
Sbjct: 258 LGTGNHKAEEKFNAKEVAGWGLLNWLTHDNSTPIIDAFSQASSDMVDFHLSAVFRALHSE 317

Query: 310 KNYLRIQETDLSGEVALVDIATEQNLKNLTKVGKELLKRAVSRVNLETGEYEAVDGEGTN 369
            NY+RIQ+  L+G+ A VDIAT +NL  L K G ELLK+ V+RVNL++G  E    E TN
Sbjct: 318 ANYIRIQDDTLTGDAASVDIATVENLDILAKTGDELLKKPVARVNLDSGCNENA-YETTN 377

Query: 370 EEALTQFAKMLSEQRKLQ 386
           E AL + A +LS+++K++
Sbjct: 378 EHALIKLAGILSKEKKIR 394

[Close]

BLAST of CmaCh02G005470 vs. TAIR 10
Match: AT4G37070.2 (Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein )

HSP 1 Score: 390.2 bits (1001), Expect = 1.9e-108
Identity = 193/378 (51.06%), Postives = 268/378 (70.90%), Query Frame = 0


Query: 10  MTTILSIDGGGIRGIIPSTILAFFESKLQELDGPDARIADYFDLIAGTSTGGLIAAMLTA 69
           + TILS+DGGG+RGII   ILAF E +LQELDG +AR+ADYFD+IAGTSTGGL+ AMLT 
Sbjct: 18  LVTILSLDGGGVRGIIAGVILAFLEKQLQELDGEEARLADYFDVIAGTSTGGLVTAMLTV 77

Query: 70  PNKDKKPLYAAKDLTNFFLEHSPKIFPQKNYLFSSVTNLFGKVLGPKYDGQYLRTLLNDQ 129
           P++  +P +AAKD+  F+LEH PKIFPQ   + + +  L   + GPKY G+YLR LL+  
Sbjct: 78  PDETGRPHFAAKDIVPFYLEHCPKIFPQPTGVLALLPKLPKLLSGPKYSGKYLRNLLSKL 137

Query: 130 LRDTTLKETLTNVVIPAFDINHLHPVIFSNVKARWDELKNPKLADVCISTSAAPTYLPAY 189
           L +T L +TLTN+VIP FDI  L P IFS+ +   D   + K++D+CI TSAAPT+ P +
Sbjct: 138 LGETRLHQTLTNIVIPTFDIKKLQPTIFSSYQLLVDPSLDVKVSDICIGTSAAPTFFPPH 197

Query: 190 EFQTNNSMGNTHVFNMVDGGVAANNPTLAAITQVSKG--TNICEPFKTKPMETERMLVLS 249
            F   +S GN   FN+VDG V ANNPTL A+T VSK    N  +  K KP+  +R LV+S
Sbjct: 198 YFSNEDSQGNKTEFNLVDGAVTANNPTLVAMTAVSKQIVKNNPDMGKLKPLGFDRFLVIS 257

Query: 250 LGTGAAKNEGKYSASKAAKWGMFNWVYDNGATPIVDIFSDASSDMVDFHVGSFFQSFRCH 309
           +GTG+ K E KYSA KAAKWG+ +W+YD+G+TPI+DI  ++S DM+ +H    F++ +  
Sbjct: 258 IGTGSTKREEKYSAKKAAKWGIISWLYDDGSTPILDITMESSRDMIHYHSSVVFKALQSE 317

Query: 310 KNYLRIQETDLSGEVALVDIATEQNLKNLTKVGKELLKRAVSRVNLETGEYEAVDGEGTN 369
             YLRI +  L G+V+ +D+AT+ NL+NL K+G+++L   V ++N++TG YE V    TN
Sbjct: 318 DKYLRIDDDTLEGDVSTMDLATKSNLENLQKIGEKMLTNRVMQMNIDTGVYEPVAENITN 377

Query: 370 EEALTQFAKMLSEQRKLQ 386
           +E L ++AK+LS++RKL+
Sbjct: 378 DEQLKRYAKILSDERKLR 395

[Close]

BLAST of CmaCh02G005470 vs. TAIR 10
Match: AT4G37060.1 (PATATIN-like protein 5 )

HSP 1 Score: 382.9 bits (982), Expect = 3.1e-106
Identity = 189/378 (50.00%), Postives = 264/378 (69.84%), Query Frame = 0


Query: 10  MTTILSIDGGGIRGIIPSTILAFFESKLQELDGPDARIADYFDLIAGTSTGGLIAAMLTA 69
           + TILS+DGGG+RGII   ILA+ E +LQELDG   R+ADYFD+IAGTSTGGL+ AMLTA
Sbjct: 18  LVTILSLDGGGVRGIIAGVILAYLEKQLQELDGEHVRVADYFDVIAGTSTGGLVTAMLTA 77

Query: 70  PNKDKKPLYAAKDLTNFFLEHSPKIFPQKNYLFSSVTNLFGKVLGPKYDGQYLRTLLNDQ 129
           P+++ +P +AAK++  F+LEH PKIFPQ   + + +  L   + GPKY G YLRT L   
Sbjct: 78  PDENGRPRFAAKEIVPFYLEHCPKIFPQPTGVLALLPKLPKLLSGPKYSGNYLRTTLGKL 137

Query: 130 LRDTTLKETLTNVVIPAFDINHLHPVIFSNVKARWDELKNPKLADVCISTSAAPTYLPAY 189
           L +T L++TLTNVVIP FDI  L P IFS+ +A  D   + K++D+CI TSAAPTY P Y
Sbjct: 138 LGETKLRQTLTNVVIPTFDIKTLQPTIFSSYQALTDPSLDVKVSDICIGTSAAPTYFPPY 197

Query: 190 EFQTNNSMGNTHVFNMVDGGVAANNPTLAAITQVSKG--TNICEPFKTKPMETERMLVLS 249
            F   +S G T  FN+VDGGV ANNPTL A+T V+K    N  +     P+  ++ LV+S
Sbjct: 198 YFSNEDSQGKTRHFNLVDGGVTANNPTLVAMTAVTKQIVNNNPDMGTLNPLGYDQFLVIS 257

Query: 250 LGTGAAKNEGKYSASKAAKWGMFNWVYDNGATPIVDIFSDASSDMVDFHVGSFFQSFRCH 309
           +GTG+AK E +YSA KAAKWG+ +W+Y++G TPI+DI  ++S D+V +H    F++ +  
Sbjct: 258 IGTGSAKKEERYSAKKAAKWGIISWLYEDGTTPILDITFESSRDIVHYHSSVVFKALQSE 317

Query: 310 KNYLRIQETDLSGEVALVDIATEQNLKNLTKVGKELLKRAVSRVNLETGEYEAVDGEGTN 369
             YLRI +  L G+ + +D++T+ NL+NL K+G+++L   V ++N++TG YE       N
Sbjct: 318 DKYLRIDDDTLEGDASTLDLSTKSNLENLIKLGEKMLTNRVMQMNIDTGTYEPAAENINN 377

Query: 370 EEALTQFAKMLSEQRKLQ 386
           +E L +FAK+LSE+RKL+
Sbjct: 378 DEQLKRFAKILSEERKLR 395

[Close]

BLAST of CmaCh02G005470 vs. TAIR 10
Match: AT4G37070.3 (Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein )

HSP 1 Score: 375.6 bits (963), Expect = 5.0e-104
Identity = 186/364 (51.10%), Postives = 255/364 (70.05%), Query Frame = 0


Query: 10  MTTILSIDGGGIRGIIPSTILAFFESKLQELDGPDARIADYFDLIAGTSTGGLIAAMLTA 69
           + TILS+DGGG+RGII   ILAF E +LQELDG +AR+ADYFD+IAGTSTGGL+ AMLT 
Sbjct: 18  LVTILSLDGGGVRGIIAGVILAFLEKQLQELDGEEARLADYFDVIAGTSTGGLVTAMLTV 77

Query: 70  PNKDKKPLYAAKDLTNFFLEHSPKIFPQKNYLFSSVTNLFGKVLGPKYDGQYLRTLLNDQ 129
           P++  +P +AAKD+  F+LEH PKIFPQ   + + +  L   + GPKY G+YLR LL+  
Sbjct: 78  PDETGRPHFAAKDIVPFYLEHCPKIFPQPTGVLALLPKLPKLLSGPKYSGKYLRNLLSKL 137

Query: 130 LRDTTLKETLTNVVIPAFDINHLHPVIFSNVKARWDELKNPKLADVCISTSAAPTYLPAY 189
           L +T L +TLTN+VIP FDI  L P IFS+ +   D   + K++D+CI TSAAPT+ P +
Sbjct: 138 LGETRLHQTLTNIVIPTFDIKKLQPTIFSSYQLLVDPSLDVKVSDICIGTSAAPTFFPPH 197

Query: 190 EFQTNNSMGNTHVFNMVDGGVAANNPTLAAITQVSKG--TNICEPFKTKPMETERMLVLS 249
            F   +S GN   FN+VDG V ANNPTL A+T VSK    N  +  K KP+  +R LV+S
Sbjct: 198 YFSNEDSQGNKTEFNLVDGAVTANNPTLVAMTAVSKQIVKNNPDMGKLKPLGFDRFLVIS 257

Query: 250 LGTGAAKNEGKYSASKAAKWGMFNWVYDNGATPIVDIFSDASSDMVDFHVGSFFQSFRCH 309
           +GTG+ K E KYSA KAAKWG+ +W+YD+G+TPI+DI  ++S DM+ +H    F++ +  
Sbjct: 258 IGTGSTKREEKYSAKKAAKWGIISWLYDDGSTPILDITMESSRDMIHYHSSVVFKALQSE 317

Query: 310 KNYLRIQETDLSGEVALVDIATEQNLKNLTKVGKELLKRAVSRVNLETGEYEAVDGEGTN 369
             YLRI +  L G+V+ +D+AT+ NL+NL K+G+++L   V ++N++TG YE V    TN
Sbjct: 318 DKYLRIDDDTLEGDVSTMDLATKSNLENLQKIGEKMLTNRVMQMNIDTGVYEPVAENITN 377

Query: 370 EEAL 372
           +E L
Sbjct: 378 DEQL 381

The following BLAST results are available for this feature:

BLAST of CmaCh02G005470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2YW91	3.7e-120	54.97	Patatin-like protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=PLP2 PE=3 SV=1	[more]
Q6ZJD3	3.7e-120	54.97	Patatin-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=PLP2 PE=3 SV=...	[more]
O23181	1.6e-110	52.30	Patatin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=PLP3 PE=2 SV=2	[more]
O48723	1.0e-109	53.70	Patatin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=PLP2 PE=1 SV=1	[more]
O23179	2.7e-107	51.06	Patatin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=PLP1 PE=1 SV=2	[more]

BLAST of CmaCh02G005470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37050.1	1.1e-111	52.30	PATATIN-like protein 4	[more]
AT2G26560.1	7.2e-111	53.70	phospholipase A 2A	[more]
AT4G37070.2	1.9e-108	51.06	Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein	[more]
AT4G37060.1	3.1e-106	50.00	PATATIN-like protein 5	[more]
AT4G37070.3	5.0e-104	51.10	Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002641	Patatin-like phospholipase domain	PFAM	PF01734	Patatin	coord: 14..220 e-value: 9.5E-25 score: 88.0
IPR002641	Patatin-like phospholipase domain	PROSITE	PS51635	PNPLA	coord: 14..220 score: 36.856071
None	No IPR available	GENE3D	3.40.1090.10	Cytosolic phospholipase A2 catalytic domain	coord: 4..387 e-value: 2.8E-120 score: 403.9
None	No IPR available	PANTHER	PTHR32176:SF49	PATATIN	coord: 7..386
None	No IPR available	PANTHER	PTHR32176	XYLOSE ISOMERASE	coord: 7..386
IPR016035	Acyl transferase/acyl hydrolase/lysophospholipase	SUPERFAMILY	52151	FabD/lysophospholipase-like	coord: 9..361

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G005470.1	CmaCh02G005470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016042	lipid catabolic process
biological_process	GO:0006629	lipid metabolic process
molecular_function	GO:0016298	lipase activity