CmaCh02G005450 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCGACGTCGACCGGAGAATGACTGGTCTTAACCCGGCCCACCTCGCCGGCCTCCGCCGTCTTTCCGCCCGTGCTGCCGCTACCTCCACCGCCTCCTCCGCCCCCCTCCGCAACGGCCTCCTCTCCTTCTCCTCTCTTGCCGATGAAGTCCTCACCCATCTACGAAACTCCGGCGTCGACGTTCAACCCGGTCTCTCTGATGCGGAATTCGCCCGAGCTGAGGCTGAGTTCCGCTTCGCCTTTCCTCCTGATCTCCGGGCAGTTCTCTCCGCTGGCCTCCCCGTTGGCCCCGGTTTTCCTGACTGGCGCTCCTCCGGTGCACGCCTCCATCTTCGGTCCTCCCTCGACCTACCAATTGCTGCAATTTCCTTCCAAATCGCTAGAAACACTCTCTGGTCTCGCTCTTGGGGTCCCAGGCCGGCGGAACCGGAAAAGGCCTTACGGGTTGCGAGAAATTCGCTTAAACGAGCTCCTGTTTTGATCCCCATTTTCAACCATTGCTACATTCCCTGCAACCCGCCCTTGGCTGGGAATCCGATCTTCTTTGTCGATGAGAGTCGAGTTCTTTGCTGTGGCTTTGATTTGTCGGATTTCTTCGAACGGGAGTCTCTCTTTCGATGCTCTGCTTCCGATTCCGATTCGGGTCCTCTGTTTTCGAAACAGAGGTCTCTCGCCGAGAAGTCCTTTGGATCGTCCACGAATTTCTCGCGACGGAGCTTAGATTCGGGGGTTGTAAAAACGCCGAGGTGGGTCGAGTTTTGGAGCGACGCCGCCGTGGATCGGCGGCGGAGAAACTCGTCGTCGTCATCGAATTCCTCGCCGGATCGGTTCTTCGAGTTGCCAAGATCCGAAATCCCGAAGTGGGTTGGGGAGTATATTGGAGAATTAGGATCAGTTTTGAGATCGGGCGGGTGGAGTGAATCGGAGGTGGCGGAGATGGTGGATGTCTCAGCATCAGGATTCTTCGACGGCGAAATGGTTATGTTGGATAATCAGGCAGTTTTGGATGCTCTGCTTTTGAAAGTGGACCGGTTTTCCGGTTCGTTGAGACGGGCCGGGTGGAGCTCCGAAGAGGTTTCGGAGGCGTTTGGATTCGATTTTCGGCCGGAGAAGGAGAGGAAACCGGCGAAGAAGCTCTCGGCGGAATTGGTGGAGCGAATTGGGAAACTGGCTGAGTCGGTTTCCCGGTCATGA ATGGTCGACGTCGACCGGAGAATGACTGGTCTTAACCCGGCCCACCTCGCCGGCCTCCGCCGTCTTTCCGCCCGTGCTGCCGCTACCTCCACCGCCTCCTCCGCCCCCCTCCGCAACGGCCTCCTCTCCTTCTCCTCTCTTGCCGATGAAGTCCTCACCCATCTACGAAACTCCGGCGTCGACGTTCAACCCGGTCTCTCTGATGCGGAATTCGCCCGAGCTGAGGCTGAGTTCCGCTTCGCCTTTCCTCCTGATCTCCGGGCAGTTCTCTCCGCTGGCCTCCCCGTTGGCCCCGGTTTTCCTGACTGGCGCTCCTCCGGTGCACGCCTCCATCTTCGGTCCTCCCTCGACCTACCAATTGCTGCAATTTCCTTCCAAATCGCTAGAAACACTCTCTGGTCTCGCTCTTGGGGTCCCAGGCCGGCGGAACCGGAAAAGGCCTTACGGGTTGCGAGAAATTCGCTTAAACGAGCTCCTGTTTTGATCCCCATTTTCAACCATTGCTACATTCCCTGCAACCCGCCCTTGGCTGGGAATCCGATCTTCTTTGTCGATGAGAGTCGAGTTCTTTGCTGTGGCTTTGATTTGTCGGATTTCTTCGAACGGGAGTCTCTCTTTCGATGCTCTGCTTCCGATTCCGATTCGGGTCCTCTGTTTTCGAAACAGAGGTCTCTCGCCGAGAAGTCCTTTGGATCGTCCACGAATTTCTCGCGACGGAGCTTAGATTCGGGGGTTGTAAAAACGCCGAGGTGGGTCGAGTTTTGGAGCGACGCCGCCGTGGATCGGCGGCGGAGAAACTCGTCGTCGTCATCGAATTCCTCGCCGGATCGGTTCTTCGAGTTGCCAAGATCCGAAATCCCGAAGTGGGTTGGGGAGTATATTGGAGAATTAGGATCAGTTTTGAGATCGGGCGGGTGGAGTGAATCGGAGGTGGCGGAGATGGTGGATGTCTCAGCATCAGGATTCTTCGACGGCGAAATGGTTATGTTGGATAATCAGGCAGTTTTGGATGCTCTGCTTTTGAAAGTGGACCGGTTTTCCGGTTCGTTGAGACGGGCCGGGTGGAGCTCCGAAGAGGTTTCGGAGGCGTTTGGATTCGATTTTCGGCCGGAGAAGGAGAGGAAACCGGCGAAGAAGCTCTCGGCGGAATTGGTGGAGCGAATTGGGAAACTGGCTGAGTCGGTTTCCCGGTCATGA ATGGTCGACGTCGACCGGAGAATGACTGGTCTTAACCCGGCCCACCTCGCCGGCCTCCGCCGTCTTTCCGCCCGTGCTGCCGCTACCTCCACCGCCTCCTCCGCCCCCCTCCGCAACGGCCTCCTCTCCTTCTCCTCTCTTGCCGATGAAGTCCTCACCCATCTACGAAACTCCGGCGTCGACGTTCAACCCGGTCTCTCTGATGCGGAATTCGCCCGAGCTGAGGCTGAGTTCCGCTTCGCCTTTCCTCCTGATCTCCGGGCAGTTCTCTCCGCTGGCCTCCCCGTTGGCCCCGGTTTTCCTGACTGGCGCTCCTCCGGTGCACGCCTCCATCTTCGGTCCTCCCTCGACCTACCAATTGCTGCAATTTCCTTCCAAATCGCTAGAAACACTCTCTGGTCTCGCTCTTGGGGTCCCAGGCCGGCGGAACCGGAAAAGGCCTTACGGGTTGCGAGAAATTCGCTTAAACGAGCTCCTGTTTTGATCCCCATTTTCAACCATTGCTACATTCCCTGCAACCCGCCCTTGGCTGGGAATCCGATCTTCTTTGTCGATGAGAGTCGAGTTCTTTGCTGTGGCTTTGATTTGTCGGATTTCTTCGAACGGGAGTCTCTCTTTCGATGCTCTGCTTCCGATTCCGATTCGGGTCCTCTGTTTTCGAAACAGAGGTCTCTCGCCGAGAAGTCCTTTGGATCGTCCACGAATTTCTCGCGACGGAGCTTAGATTCGGGGGTTGTAAAAACGCCGAGGTGGGTCGAGTTTTGGAGCGACGCCGCCGTGGATCGGCGGCGGAGAAACTCGTCGTCGTCATCGAATTCCTCGCCGGATCGGTTCTTCGAGTTGCCAAGATCCGAAATCCCGAAGTGGGTTGGGGAGTATATTGGAGAATTAGGATCAGTTTTGAGATCGGGCGGGTGGAGTGAATCGGAGGTGGCGGAGATGGTGGATGTCTCAGCATCAGGATTCTTCGACGGCGAAATGGTTATGTTGGATAATCAGGCAGTTTTGGATGCTCTGCTTTTGAAAGTGGACCGGTTTTCCGGTTCGTTGAGACGGGCCGGGTGGAGCTCCGAAGAGGTTTCGGAGGCGTTTGGATTCGATTTTCGGCCGGAGAAGGAGAGGAAACCGGCGAAGAAGCTCTCGGCGGAATTGGTGGAGCGAATTGGGAAACTGGCTGAGTCGGTTTCCCGGTCATGA MVDVDRRMTGLNPAHLAGLRRLSARAAATSTASSAPLRNGLLSFSSLADEVLTHLRNSGVDVQPGLSDAEFARAEAEFRFAFPPDLRAVLSAGLPVGPGFPDWRSSGARLHLRSSLDLPIAAISFQIARNTLWSRSWGPRPAEPEKALRVARNSLKRAPVLIPIFNHCYIPCNPPLAGNPIFFVDESRVLCCGFDLSDFFERESLFRCSASDSDSGPLFSKQRSLAEKSFGSSTNFSRRSLDSGVVKTPRWVEFWSDAAVDRRRRNSSSSSNSSPDRFFELPRSEIPKWVGEYIGELGSVLRSGGWSESEVAEMVDVSASGFFDGEMVMLDNQAVLDALLLKVDRFSGSLRRAGWSSEEVSEAFGFDFRPEKERKPAKKLSAELVERIGKLAESVSRS Homology
BLAST of CmaCh02G005450 vs. TAIR 10
Match: AT3G50340.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G67020.1); Has 128 Blast hits to 128 proteins in 39 species: Archae - 0; Bacteria - 46; Metazoa - 0; Fungi - 3; Plants - 76; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). ) HSP 1 Score: 589.0 bits (1517), Expect = 2.9e-168 Identity = 303/410 (73.90%), Postives = 352/410 (85.85%), Query Frame = 0
BLAST of CmaCh02G005450 vs. TAIR 10
Match: AT5G67020.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 544.3 bits (1401), Expect = 8.3e-155 Identity = 279/404 (69.06%), Postives = 327/404 (80.94%), Query Frame = 0
BLAST of CmaCh02G005450 vs. TAIR 10
Match: AT2G22790.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G67020.1); Has 111 Blast hits to 111 proteins in 33 species: Archae - 0; Bacteria - 44; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 113.2 bits (282), Expect = 4.7e-25 Identity = 87/307 (28.34%), Postives = 136/307 (44.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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