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CmaCh02G005330 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTCTCGCAAATGCCTCCACCCTCCGCTACTCTCTCCGCCGCAACCACGGCGCCGATCAATTCCTCCGATTCCGGCTGTGCTATTCCAGCCGTCTGATCTCCCGATCGCCGTCCGCCGGCCTTCCCTACGACATCCTGGAAGAAACTCCCTCGACTCCAATGGCGGATGCTCTGTTTCCTCTGCCTCTACGAGAGCTGGAAGATCCGTTATTCTGCCACGCTTACTTGATTGAATTGGTGTCCTCCTTGAACCTCGACTCCATGTCCTGCAACCCCATTGTCCAGAAGATCACGTCGTTGGTCACACAGTGGGCCGCCGTAGACTACGACGCGAAGTTCCAATTGGTGGCGGACATTGATTACATTCAAATGTTTTGGATGGAGAAGCGCCCGGGTTCAGTTGGGCGAGGTGTAATGGTGGAGGAGAAGGTGGTTCTGAAGGAAGCTGAAGTGGCGGCGGCGGAAAAGCAGGGAATTGGGGGAGAAGAGTGCAGTGTGTGCTACGAAAGCTATGAAGCAGAGAAGGGGGGAGAGAGGGAGGTGGCTAAAATCCCATGCGGCCATGTGTTTCACAAATCATGCATCCTCACCTGGTTTCAAAGGAGCAATTCGTGCCCTTTGTGTAGAGCCAAATTATAG ATGCCTCTCGCAAATGCCTCCACCCTCCGCTACTCTCTCCGCCGCAACCACGGCGCCGATCAATTCCTCCGATTCCGGCTGTGCTATTCCAGCCGTCTGATCTCCCGATCGCCGTCCGCCGGCCTTCCCTACGACATCCTGGAAGAAACTCCCTCGACTCCAATGGCGGATGCTCTGTTTCCTCTGCCTCTACGAGAGCTGGAAGATCCGTTATTCTGCCACGCTTACTTGATTGAATTGGTGTCCTCCTTGAACCTCGACTCCATGTCCTGCAACCCCATTGTCCAGAAGATCACGTCGTTGGTCACACAGTGGGCCGCCGTAGACTACGACGCGAAGTTCCAATTGGTGGCGGACATTGATTACATTCAAATGTTTTGGATGGAGAAGCGCCCGGGTTCAGTTGGGCGAGGTGTAATGGTGGAGGAGAAGGTGGTTCTGAAGGAAGCTGAAGTGGCGGCGGCGGAAAAGCAGGGAATTGGGGGAGAAGAGTGCAGTGTGTGCTACGAAAGCTATGAAGCAGAGAAGGGGGGAGAGAGGGAGGTGGCTAAAATCCCATGCGGCCATGTGTTTCACAAATCATGCATCCTCACCTGGTTTCAAAGGAGCAATTCGTGCCCTTTGTGTAGAGCCAAATTATAG ATGCCTCTCGCAAATGCCTCCACCCTCCGCTACTCTCTCCGCCGCAACCACGGCGCCGATCAATTCCTCCGATTCCGGCTGTGCTATTCCAGCCGTCTGATCTCCCGATCGCCGTCCGCCGGCCTTCCCTACGACATCCTGGAAGAAACTCCCTCGACTCCAATGGCGGATGCTCTGTTTCCTCTGCCTCTACGAGAGCTGGAAGATCCGTTATTCTGCCACGCTTACTTGATTGAATTGGTGTCCTCCTTGAACCTCGACTCCATGTCCTGCAACCCCATTGTCCAGAAGATCACGTCGTTGGTCACACAGTGGGCCGCCGTAGACTACGACGCGAAGTTCCAATTGGTGGCGGACATTGATTACATTCAAATGTTTTGGATGGAGAAGCGCCCGGGTTCAGTTGGGCGAGGTGTAATGGTGGAGGAGAAGGTGGTTCTGAAGGAAGCTGAAGTGGCGGCGGCGGAAAAGCAGGGAATTGGGGGAGAAGAGTGCAGTGTGTGCTACGAAAGCTATGAAGCAGAGAAGGGGGGAGAGAGGGAGGTGGCTAAAATCCCATGCGGCCATGTGTTTCACAAATCATGCATCCTCACCTGGTTTCAAAGGAGCAATTCGTGCCCTTTGTGTAGAGCCAAATTATAG MPLANASTLRYSLRRNHGADQFLRFRLCYSSRLISRSPSAGLPYDILEETPSTPMADALFPLPLRELEDPLFCHAYLIELVSSLNLDSMSCNPIVQKITSLVTQWAAVDYDAKFQLVADIDYIQMFWMEKRPGSVGRGVMVEEKVVLKEAEVAAAEKQGIGGEECSVCYESYEAEKGGEREVAKIPCGHVFHKSCILTWFQRSNSCPLCRAKL Homology
BLAST of CmaCh02G005330 vs. ExPASy Swiss-Prot
Match: Q9UKV5 (E3 ubiquitin-protein ligase AMFR OS=Homo sapiens OX=9606 GN=AMFR PE=1 SV=2) HSP 1 Score: 62.8 bits (151), Expect = 5.5e-09 Identity = 23/62 (37.10%), Postives = 39/62 (62.90%), Query Frame = 0
BLAST of CmaCh02G005330 vs. ExPASy Swiss-Prot
Match: Q9R049 (E3 ubiquitin-protein ligase AMFR OS=Mus musculus OX=10090 GN=Amfr PE=1 SV=2) HSP 1 Score: 62.8 bits (151), Expect = 5.5e-09 Identity = 23/62 (37.10%), Postives = 39/62 (62.90%), Query Frame = 0
BLAST of CmaCh02G005330 vs. ExPASy Swiss-Prot
Match: Q7ZW78 (E3 ubiquitin-protein ligase RNF181 OS=Danio rerio OX=7955 GN=rnf181 PE=2 SV=2) HSP 1 Score: 60.5 bits (145), Expect = 2.7e-08 Identity = 30/87 (34.48%), Postives = 45/87 (51.72%), Query Frame = 0
BLAST of CmaCh02G005330 vs. ExPASy Swiss-Prot
Match: Q9Y4L5 (E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens OX=9606 GN=RNF115 PE=1 SV=2) HSP 1 Score: 59.7 bits (143), Expect = 4.7e-08 Identity = 26/62 (41.94%), Postives = 36/62 (58.06%), Query Frame = 0
BLAST of CmaCh02G005330 vs. ExPASy Swiss-Prot
Match: Q9CY62 (E3 ubiquitin-protein ligase RNF181 OS=Mus musculus OX=10090 GN=Rnf181 PE=1 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 4.7e-08 Identity = 24/50 (48.00%), Postives = 34/50 (68.00%), Query Frame = 0
BLAST of CmaCh02G005330 vs. TAIR 10
Match: AT1G45180.1 (RING/U-box superfamily protein ) HSP 1 Score: 60.1 bits (144), Expect = 2.5e-09 Identity = 31/96 (32.29%), Postives = 53/96 (55.21%), Query Frame = 0
BLAST of CmaCh02G005330 vs. TAIR 10
Match: AT4G12190.1 (RING/U-box superfamily protein ) HSP 1 Score: 59.7 bits (143), Expect = 3.3e-09 Identity = 23/51 (45.10%), Postives = 32/51 (62.75%), Query Frame = 0
BLAST of CmaCh02G005330 vs. TAIR 10
Match: AT3G62690.1 (AtL5 ) HSP 1 Score: 59.3 bits (142), Expect = 4.3e-09 Identity = 28/49 (57.14%), Postives = 33/49 (67.35%), Query Frame = 0
BLAST of CmaCh02G005330 vs. TAIR 10
Match: AT4G05350.1 (RING/U-box superfamily protein ) HSP 1 Score: 59.3 bits (142), Expect = 4.3e-09 Identity = 23/51 (45.10%), Postives = 32/51 (62.75%), Query Frame = 0
BLAST of CmaCh02G005330 vs. TAIR 10
Match: AT1G18770.1 (RING/U-box superfamily protein ) HSP 1 Score: 58.5 bits (140), Expect = 7.4e-09 Identity = 24/52 (46.15%), Postives = 31/52 (59.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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