CmaCh02G005290 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh02G005290
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionnuclear envelope integral membrane protein 1 isoform X1
LocationCma_Chr02: 2919159 .. 2924791 (-)
RNA-Seq ExpressionCmaCh02G005290
SyntenyCmaCh02G005290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTCTGCTGCGAGGTTCTCCTCTCCTAACCGTCCTACATTTCTGGTGGAGAGGAAAAATAAGGCTTTGGTTCTTTCCTCCGAACCAGAAATCAAGCATGGTCCCTTCGACGCTGTTTCGTGCTTCTACTTGCCTTCTTTTTCTCGCCCTGTTCTTCGCTTTAGCATACTCCATTCCTGACCCTCAACCGCTTCGTCTTGGTGCGTTTATTTTCCACTTCTTGCATTCTTTTTCATGCCGATTGCACTACATTTTGAGCTTTTTTTCTGTTTCTTACTTGCTTAGGATTGTTATACTGTCAATGTGTTCTTTTTTTCCCTCTATTTTGGCTTTGGCAGTGTTCAAGTATACTTGCATTTTTCTGCTCTCCCCCTAGAACAGGGCGTTTATAGATTTTGTTTTTGGGAATGCTATGGATTGGTGCACGGGCAAAGTTTCTTTAGAAATGAATTGCTGATTAAACTGTGATTTCTTTGTTACTTTAGTTTCAATGACACATTCTATGATAGAAATTCAAAATTTAACTTCTTGGTTGAGGAAGATGTCCTCTTGGTTTATGCTTTAACAATTACACGGTACCCATGACTTCAAGATTATTGATGCATATGTACTCAATTATTGGGGCCTGTATCAGGGGGTTTACGAGGGAAGATAGGTTCTTTATCTCTTAGTTTAATTTCATGAATATTGGGAAAGAAGAGTTTCCATTGCCATTATCTAGTCATCTTGTTCAGATAAATTTCATTGGCCCCTTCTGTTACCTTCTTGGATAGAAGTTATAACTTCTTGAAAAGCTTTGAAATTTCCATTTTATGAGTATAAGAAAAATCTTTTATGGTCCATTCATTCCTTGATGGCATATACTGCCTACTCATGTTCCTGGTCTCTTCAGTTGTCTCTGAATCCACAACTCTGCAACTATCTCGTGGCTTGCCTGTGCAAAATTCACCAGGTTCCAAACCTGGAACTGTGGTGGTTTGTGAAAGAGTATACATCCAAGGATTATTGAGGATTAAAAATCTGTGGAAGCTTGCCCACACGGTAAAAGTGAAGCTTTCCATGATAAATTCAAGTGCTCGGATACCGAATTTAGAGGTTTGTTTTCACAGGTGAGTGCATTATAATTTTTTTTTTTTATAATACCAAGTATTGAGGTTTGTTCTCCAGGTTCGTTTTCGGGGGCAAGCCTACAAAAATTTTGATTTTCATGAGTGAAGAACACAAATATACTCTATACTAGATCTGATTAACCTTCAAAATAACATGGCTTTGCAGGAACATGTCTCTTGGTATAGGGATGTGTCCACAAAGTCAGTGGGAGAAAGTTGCCAAGGGTTCTTGGGCTCAATCCATGTCGCCGTTTGACCACAAGCTTATAGATATCAGAACTTCTGGGTTATCCCTGGAAAGTTTTGAGGTATCTATTGAAGAAGGTATGTGCATCTATACTGTGAATTGCAAAAGAAAAACAAAGTGGGAGAAATTCGGTTTCAACCTTATCTGCTTGTGTAAGAAGATTGACTCTAAGCCTCCCCCTCCGTAATGCAGAATTCTTTATGTACCGCATAATTTTTTTAATCCTGGGCTTGGTGTTGATGAGTTCGGCCTCCATTCTTGGCAAGTCATTGGTATTCTATTATGGAAGTGCTATGACAATTGGAGTTCTCCTTGTAGTGTTAATGATCCTTTTTCAGGTAATTAGGTCGTATCTTCTATCTTAACTTAAATGTATATATCATACTTCTTTCGATGTTATTATGTTTCTTATTGAATAAAAAATGGATATGTAATATTTACTACTTTGGATCTTGTAAAAGTGTTCTGTTTCTGGTAACTTGGAAGTTGGTGCTGGCTTTAGGATATTGCTGTGACTTTGAGCATGCCGTTTCTACTTTCTTAGTTGTTGATCTTGGTGACAATATCATGATATTATTCTCTTTATGGTTTTCAATATTGACATTCCAATTATCTAGGTCTAAGCAGTTTGAGTCACTGGTTCAAATTATATGAGGGGAAAAGAGAAAATTGAAGTACAGAGATAAGTTCATGTTAGTTCAAGCTACGAATTCAAATCACCCAGGCCCATAGCCGACTCATGTGAAGCATCCATTTCCCAAAGGACATTTAACCAAAGTTTCCCCTTTCAAATTTCTTTGTACTCCAATTAATCCTTTCATGGTTGAATCTCCTCCACATTTTGCTCGTTGTGTTGACATCCCCCCTCAAGCATAAGCACTCCCCCTAAAAACCAACCAATGGATACTCTCTCCTTAAAAAAGTCTGCCTCTGTGTTGAACTCCATATAGTCTTGGTAAATGATCTCTCTGCCTTCATGATTTTTAGATTTTTGCAACAAAACAATATTAGGATTATCTCCTTCATAATCTTTATGATTTTTATCCATAAAGCCCTAGAAACCTAGTTGCATCTTCTTAAATGCATAAAAACTGGCCTCCCTCATCTCCACTTGAGAATCTTTTCATGATATACATTTGAGGAAAGGTTATTCAACTCCCTGAAGCCTTTTAAGTTCAGCATTGAAGCCTTCTTCCTCACCCTTGGGCCAACCTGTATTGTTCATGGTTTTTGTCTTCATCCTGTAATCTGGCTTACCTCCCTTTTTGGGTACAGATAATGAATGGCCTTTTGTAAGGGCTTGTGGCTCTTTAATAGGCAAATGATATAGAACTGAAGGTGTGAACTTGGATTCATGGTTCATCCCCATTCTATTTATTGCTCTAATCTCTTTTTCCAATGAGATTGTCTATTGCTTGAAAGATATATGGAAATGTGACTATAGCTTGATAGCATTGTGTTCCATAATGTAATACTACTTTTTTCTTGCCTGGTTACTGACAGGGGATGAAGCTTCTTCCTACTGGTCGGAAGAGCTCACTTGCAATTTTTCTATATGCATCTGCAGTGGGTATCAACCTTTTGTCAGTCTCACATATCTTCTTTCTGTGATCATAGAAGTACTGAATGTTCAACTTACAATCCATCTTTCCACAGGTTGGTCTGGGATCTTTTTTCCTCCGTTACATACCTGGATTATTGCATCAAATACTTTTGGAAATGGGTATAAGTGAGGACATGTATAATCCTGTACGTAACTTATCTTTCATCTTTCTTGATAATTTACCTCTCTATTTCAGTCATGAATAAATTTACAGAAGTGTTGACTTTTTATCTTATTCTCTTGTGATGCGTTGGCACCTCATAATCATGTTGGATGGAAAAGACCTCATGTATGTGTGTTTTGGCTAAAATTTGCCTAAATGCTCGCAGTGACTACATACGACCAATTCAAGGTCTCTTACATACTGGACCATGACATTACAACTATTGTTTAAACACGAATATCTATCAATTCATTGATATACCTTTATTTAGCCATTGGTCGATCTGAATCATATCAAGTTGGACACAGACGACACATCCTTACTGCAAAACGTTATCGTGCCTGCATGCATTTTTTTAATTGAAGTAATCTTTCAAAAAATAATCCAAATGGAAAACCTTAACAATAATGTGTTCCACTCTGCTCTTCTTGCTGCCTTCTAGGACATGTATATGTGTATCTTGTACTTCATATTACTTTTATCATTTTTTCCACTTGGTTTATAACTATAGTGGTATTCTTTCTTATAAGTTCATTGAAATGCATTAGTTACCGGGGAATTAAATGCTTCTTAAATTATTGATTACAGGTAGCTACATTTCTACTGGCTTTTATTTTTCTGATTGGAGCATGGTTGGGCTTTTGGGTAGTCCACAAATTTGTCCTTGATGAAGATGGATCAATTGATACTAGCACATCGCTTTTTGTCACATGGTGCATACGGATTTTGGCTGCTCTTCTGATTCTTCAGGTTTTCTCATTGTCATTACTACCTCCGTTGTTGGAAATTATTTATGCATTTGTACTCTTTTGTTAAGTGGGTTTAAAGATGAAGATCACCCAACACGACAATGTGGGAAAACGGAAAATTTAAAGATATTTGATATCTGATGTTGCCTCAAGGACGGGAAGATTTGGAATAAATTAGCTATTATATATGTTGCTTTTCTTTCCCTGATAATAGAGTCTATAACAAGTGAGTCTAATCCAAGTATCTTGAAACTTATGTCAGTGCTTAATATGTATCATATTTTCAAACAATTTTCTGTTGACAAATTTAAATTACTTTCAGTGTTCTTTGGATCCATTGCTGGCAACAGGAGTTTTAATATGTGGAATAATGGCTTCATCAATACTGAGGAGAACTTTTAAGTTGAGATTTCTTCGTCGGCAGTACAAGTTTGTATTCTATCCAAATCTAGAGTACTTTAATATCATACACTTTCCTTTTTTCACTACGGACACATTATTTATTAGACTGATATACAAGCTCAAATGGCAGTTCTTTGTGTTATTAAGAACCATTTCTCTTATTTCAATCGAGTAAGAAAATTGAACTTCTCCAATTCAGAATGTGAGTTATGAACTTATTTAACTACGCAATTCATGGAACTGTTATACTGTGTGGAAATATCTGTTCTTCTAATCTTAAAAATATATAGAAAGTGACAGCAAGTCTACCAATAAGGCATACGTTTCATGTATTTCATATAATGTATCACATTGCGGGTTGTTTTTGTTCAGGAATTTGTTCAAATCGCCAAAGAGAAAACTCAAGCGATCTCATATCTCTGATACGCCACGTTTTGATGATTCTGATGACGAACTCGCCATGAAGTCTCCCCTGAGTTATGAAGACCCCAAGTTTTACGGATCTCAAGACAGAAACTTCGCCCTTCAGTCCTGCAGTCTTTCTGAACGTGGTATGTTAAATGTCTCTAGTAACACTTCTGAACTAATAAAAGACATTCTAGAATAAAAACAGTTTGTTTATGATACCTGATATTGAAATAATGCTACAATGCCCCATCAGTCAGGCAGCAATCTTTTGCCATCTTTCTCGTTCTGGTTTTCTTTTATTAACGAACCTTTCTTCTGTCTGATGCAGATGAATATCCTTCGACATTCCATTCCACACCTGGACGGAGAGAATTTTCTAAGGATGAGTGGAAAAGGTTCACGAAGGACTCAACCGAAAAAGCTTTGGAAGGACTAGTTTCTTCGCCAGATTTCGGCAGGTGGCTCGTTGACAATGCAGATAGAATCAACATAACTCCCCAAAGCAGTAGAAGAGCTGAGAAAGGTCGAAAGTGGCTCCCTTGGTTGTGATTGGTCAAGGTCAAACGCAATGCTAGATTAGGTATGTAAAACATACTGCCTGCATAGTTATCATGACTTTTCTGGGAAGCAATAGGATGTGTTTAGACAAATTGATCACACCCCCTAACTTGTATTTCCTTGTCTGTTAGATCATTATTCATCACCTAGGTTCAGGGTGTCTAAGAGATTTATATGTTCGCCTAGATTTGCATACATTTAGCCATTGAATGGGAAGCATGTGTGGTGTAACTTTATAGCTTTTTTGGGCTGCACCTAACTTCAATTCAGTATTTACTGCACCCATGATTTTCATGGAGGGGTTGTCACTGTATCACTTCGAAATGTAATGTAACTTTATAGCCTATTGGGGCTGATTGGCTTCAATTCAATTGCTATTGTACCATGCTTTTCAC

mRNA sequence

TGTCTGCTGCGAGGTTCTCCTCTCCTAACCGTCCTACATTTCTGGTGGAGAGGAAAAATAAGGCTTTGGTTCTTTCCTCCGAACCAGAAATCAAGCATGGTCCCTTCGACGCTGTTTCGTGCTTCTACTTGCCTTCTTTTTCTCGCCCTGTTCTTCGCTTTAGCATACTCCATTCCTGACCCTCAACCGCTTCGTCTTGTTGTCTCTGAATCCACAACTCTGCAACTATCTCGTGGCTTGCCTGTGCAAAATTCACCAGGTTCCAAACCTGGAACTGTGGTGGTTTGTGAAAGAGTATACATCCAAGGATTATTGAGGATTAAAAATCTGTGGAAGCTTGCCCACACGGTAAAAGTGAAGCTTTCCATGATAAATTCAAGTGCTCGGATACCGAATTTAGAGGTTTGTTTTCACAGGAACATGTCTCTTGGTATAGGGATGTGTCCACAAAGTCAGTGGGAGAAAGTTGCCAAGGGTTCTTGGGCTCAATCCATGTCGCCGTTTGACCACAAGCTTATAGATATCAGAACTTCTGGGTTATCCCTGGAAAGTTTTGAGGTATCTATTGAAGAAGAATTCTTTATGTACCGCATAATTTTTTTAATCCTGGGCTTGGTGTTGATGAGTTCGGCCTCCATTCTTGGCAAGTCATTGGTATTCTATTATGGAAGTGCTATGACAATTGGAGTTCTCCTTGTAGTGTTAATGATCCTTTTTCAGGGGATGAAGCTTCTTCCTACTGGTCGGAAGAGCTCACTTGCAATTTTTCTATATGCATCTGCAGTTGGTCTGGGATCTTTTTTCCTCCGTTACATACCTGGATTATTGCATCAAATACTTTTGGAAATGGGTATAAGTGAGGACATGTATAATCCTGTAGCTACATTTCTACTGGCTTTTATTTTTCTGATTGGAGCATGGTTGGGCTTTTGGGTAGTCCACAAATTTGTCCTTGATGAAGATGGATCAATTGATACTAGCACATCGCTTTTTGTCACATGGTGCATACGGATTTTGGCTGCTCTTCTGATTCTTCAGTGTTCTTTGGATCCATTGCTGGCAACAGGAGTTTTAATATGTGGAATAATGGCTTCATCAATACTGAGGAGAACTTTTAAGTTGAGATTTCTTCGTCGGCAGTACAAGAATTTGTTCAAATCGCCAAAGAGAAAACTCAAGCGATCTCATATCTCTGATACGCCACGTTTTGATGATTCTGATGACGAACTCGCCATGAAGTCTCCCCTGAGTTATGAAGACCCCAAGTTTTACGGATCTCAAGACAGAAACTTCGCCCTTCAGTCCTGCAGTCTTTCTGAACGTGATGAATATCCTTCGACATTCCATTCCACACCTGGACGGAGAGAATTTTCTAAGGATGAGTGGAAAAGGTTCACGAAGGACTCAACCGAAAAAGCTTTGGAAGGACTAGTTTCTTCGCCAGATTTCGGCAGGTGGCTCGTTGACAATGCAGATAGAATCAACATAACTCCCCAAAGCAGTAGAAGAGCTGAGAAAGGTCGAAAGTGGCTCCCTTGGTTGTGATTGGTCAAGGTCAAACGCAATGCTAGATTAGGTATGTAAAACATACTGCCTGCATAGTTATCATGACTTTTCTGGGAAGCAATAGGATGTGTTTAGACAAATTGATCACACCCCCTAACTTGTATTTCCTTGTCTGTTAGATCATTATTCATCACCTAGGTTCAGGGTGTCTAAGAGATTTATATGTTCGCCTAGATTTGCATACATTTAGCCATTGAATGGGAAGCATGTGTGGTGTAACTTTATAGCTTTTTTGGGCTGCACCTAACTTCAATTCAGTATTTACTGCACCCATGATTTTCATGGAGGGGTTGTCACTGTATCACTTCGAAATGTAATGTAACTTTATAGCCTATTGGGGCTGATTGGCTTCAATTCAATTGCTATTGTACCATGCTTTTCAC

Coding sequence (CDS)

TGTCTGCTGCGAGGTTCTCCTCTCCTAACCGTCCTACATTTCTGGTGGAGAGGAAAAATAAGGCTTTGGTTCTTTCCTCCGAACCAGAAATCAAGCATGGTCCCTTCGACGCTGTTTCGTGCTTCTACTTGCCTTCTTTTTCTCGCCCTGTTCTTCGCTTTAGCATACTCCATTCCTGACCCTCAACCGCTTCGTCTTGTTGTCTCTGAATCCACAACTCTGCAACTATCTCGTGGCTTGCCTGTGCAAAATTCACCAGGTTCCAAACCTGGAACTGTGGTGGTTTGTGAAAGAGTATACATCCAAGGATTATTGAGGATTAAAAATCTGTGGAAGCTTGCCCACACGGTAAAAGTGAAGCTTTCCATGATAAATTCAAGTGCTCGGATACCGAATTTAGAGGTTTGTTTTCACAGGAACATGTCTCTTGGTATAGGGATGTGTCCACAAAGTCAGTGGGAGAAAGTTGCCAAGGGTTCTTGGGCTCAATCCATGTCGCCGTTTGACCACAAGCTTATAGATATCAGAACTTCTGGGTTATCCCTGGAAAGTTTTGAGGTATCTATTGAAGAAGAATTCTTTATGTACCGCATAATTTTTTTAATCCTGGGCTTGGTGTTGATGAGTTCGGCCTCCATTCTTGGCAAGTCATTGGTATTCTATTATGGAAGTGCTATGACAATTGGAGTTCTCCTTGTAGTGTTAATGATCCTTTTTCAGGGGATGAAGCTTCTTCCTACTGGTCGGAAGAGCTCACTTGCAATTTTTCTATATGCATCTGCAGTTGGTCTGGGATCTTTTTTCCTCCGTTACATACCTGGATTATTGCATCAAATACTTTTGGAAATGGGTATAAGTGAGGACATGTATAATCCTGTAGCTACATTTCTACTGGCTTTTATTTTTCTGATTGGAGCATGGTTGGGCTTTTGGGTAGTCCACAAATTTGTCCTTGATGAAGATGGATCAATTGATACTAGCACATCGCTTTTTGTCACATGGTGCATACGGATTTTGGCTGCTCTTCTGATTCTTCAGTGTTCTTTGGATCCATTGCTGGCAACAGGAGTTTTAATATGTGGAATAATGGCTTCATCAATACTGAGGAGAACTTTTAAGTTGAGATTTCTTCGTCGGCAGTACAAGAATTTGTTCAAATCGCCAAAGAGAAAACTCAAGCGATCTCATATCTCTGATACGCCACGTTTTGATGATTCTGATGACGAACTCGCCATGAAGTCTCCCCTGAGTTATGAAGACCCCAAGTTTTACGGATCTCAAGACAGAAACTTCGCCCTTCAGTCCTGCAGTCTTTCTGAACGTGATGAATATCCTTCGACATTCCATTCCACACCTGGACGGAGAGAATTTTCTAAGGATGAGTGGAAAAGGTTCACGAAGGACTCAACCGAAAAAGCTTTGGAAGGACTAGTTTCTTCGCCAGATTTCGGCAGGTGGCTCGTTGACAATGCAGATAGAATCAACATAACTCCCCAAAGCAGTAGAAGAGCTGAGAAAGGTCGAAAGTGGCTCCCTTGGTTGTGA

Protein sequence

CLLRGSPLLTVLHFWWRGKIRLWFFPPNQKSSMVPSTLFRASTCLLFLALFFALAYSIPDPQPLRLVVSESTTLQLSRGLPVQNSPGSKPGTVVVCERVYIQGLLRIKNLWKLAHTVKVKLSMINSSARIPNLEVCFHRNMSLGIGMCPQSQWEKVAKGSWAQSMSPFDHKLIDIRTSGLSLESFEVSIEEEFFMYRIIFLILGLVLMSSASILGKSLVFYYGSAMTIGVLLVVLMILFQGMKLLPTGRKSSLAIFLYASAVGLGSFFLRYIPGLLHQILLEMGISEDMYNPVATFLLAFIFLIGAWLGFWVVHKFVLDEDGSIDTSTSLFVTWCIRILAALLILQCSLDPLLATGVLICGIMASSILRRTFKLRFLRRQYKNLFKSPKRKLKRSHISDTPRFDDSDDELAMKSPLSYEDPKFYGSQDRNFALQSCSLSERDEYPSTFHSTPGRREFSKDEWKRFTKDSTEKALEGLVSSPDFGRWLVDNADRINITPQSSRRAEKGRKWLPWL
Homology
[Close]
BLAST of CmaCh02G005290 vs. TAIR 10
Match: AT5G67610.1 (Uncharacterized conserved protein (DUF2215) )

HSP 1 Score: 429.1 bits (1102), Expect = 5.0e-120
Identity = 238/486 (48.97%), Postives = 325/486 (66.87%), Query Frame = 0 

Query: 38  LFRASTCLLFLALFFALAY-SIPDPQPLRLVVSESTTLQLSRGLPVQNSPGSKPGTVVVC 97
           L R S  ++ + L     + S+     L+ VV ES  LQ++  L V+ SPG KP    +C
Sbjct: 6   LLRNSGVVIGIILLHLFTFASLVSSDELQFVVGESGELQVTPSLEVKGSPGLKPDRTSLC 65

Query: 98  ERVYIQGLLRIKNLWKLAHTVKVKLSMINSSARIPNLEVCFHRNMSLGIGMCPQSQWEKV 157
           ER++I GL R K+L K AH++K+ ++  + S +  N++VCFHRN+S GIGMCP S+WEK 
Sbjct: 66  ERIHIHGLGRFKHLDKYAHSLKLIVN-ASISGKTNNIDVCFHRNLSRGIGMCPHSRWEKA 125

Query: 158 AKGSWAQSMSPFDHKLIDIRTSGLSLESFEVSIEEEFFMYRIIFLILGLVLMSSASILGK 217
           +KGSW Q+MSPFDHK++D+R    +  S EVS  EE FM+RI+FL+LG VL++SAS L +
Sbjct: 126 SKGSWVQTMSPFDHKILDVRVPSSNKVSLEVSAVEELFMHRIVFLLLGAVLLASASTLSQ 185

Query: 218 SLVFYYGSAMTIGVLLVVLMILFQGMKLLPTGRKSSLAIFLYASAVGLGSFFLRYIPGLL 277
           SL FYY SAM +G++LVVL++LFQGMKLLPTGR SS A+F+Y++ +GLG F LRY+PGL 
Sbjct: 186 SLAFYYSSAMAVGIILVVLLVLFQGMKLLPTGR-SSFALFIYSTLLGLGGFLLRYLPGLF 245

Query: 278 HQILLEMGISEDMYNPVATFLLAFIFLIGAWLGFWVVHKFVLDEDGSIDTSTSLFVTWCI 337
             +L EMGI E+MY P A F+ AF+ L GA+ GFW V K +L EDGSID STSLFV+W I
Sbjct: 246 ESLLTEMGIDEEMYTPAAIFVGAFLSLGGAFFGFWTVRKLILTEDGSIDVSTSLFVSWSI 305

Query: 338 RILAALLILQCSLDPLLATGVLICGIMASSILRRTFKLRFLRRQYK---NLFKSPKRKLK 397
           RI+AA+LILQ S+DPLLA G LI  I+ SS L++  +L+FL R ++   NL       ++
Sbjct: 306 RIMAAVLILQSSVDPLLAGGALISVILMSSTLKKITRLKFLLRLFEIPLNLLLGIWEAIR 365

Query: 398 RSHISDTPRF-----DDSDDELAMKSPLSYEDPKFYGSQDRNFALQSCSLSERDEYPSTF 457
            + I   P +       S D    ++ ++   P    S   N  ++    SE D +PS+F
Sbjct: 366 DTDIPSVPGYLHDFMQKSPDASGFRNRVTSASP----SGGINNGMRESPPSESDTFPSSF 425

Query: 458 HSTPGRREFSKDEWKRFTKDSTEKALEGLVSSPDFGRWLVDNADRINITP-QSSRRAEKG 514
           H TP R + +K+EWK+ TKDST KA++ LVSSPDFG+W   NADRIN+TP + S    + 
Sbjct: 426 HKTPERSQLTKEEWKKLTKDSTTKAVQELVSSPDFGKWAAVNADRINVTPRKGSSSKNQP 485

[Close]
BLAST of CmaCh02G005290 vs. TAIR 10
Match: AT5G67610.2 (Uncharacterized conserved protein (DUF2215) )

HSP 1 Score: 428.7 bits (1101), Expect = 6.6e-120
Identity = 233/460 (50.65%), Postives = 314/460 (68.26%), Query Frame = 0 

Query: 63  PLRLVVSESTTLQLSRGLPVQNSPGSKPGTVVVCERVYIQGLLRIKNLWKLAHTVKVKLS 122
           P   VV ES  LQ++  L V+ SPG KP    +CER++I GL R K+L K AH++K+ ++
Sbjct: 44  PYGTVVGESGELQVTPSLEVKGSPGLKPDRTSLCERIHIHGLGRFKHLDKYAHSLKLIVN 103

Query: 123 MINSSARIPNLEVCFHRNMSLGIGMCPQSQWEKVAKGSWAQSMSPFDHKLIDIRTSGLSL 182
             + S +  N++VCFHRN+S GIGMCP S+WEK +KGSW Q+MSPFDHK++D+R    + 
Sbjct: 104 -ASISGKTNNIDVCFHRNLSRGIGMCPHSRWEKASKGSWVQTMSPFDHKILDVRVPSSNK 163

Query: 183 ESFEVSIEEEFFMYRIIFLILGLVLMSSASILGKSLVFYYGSAMTIGVLLVVLMILFQGM 242
            S EVS  EE FM+RI+FL+LG VL++SAS L +SL FYY SAM +G++LVVL++LFQGM
Sbjct: 164 VSLEVSAVEELFMHRIVFLLLGAVLLASASTLSQSLAFYYSSAMAVGIILVVLLVLFQGM 223

Query: 243 KLLPTGRKSSLAIFLYASAVGLGSFFLRYIPGLLHQILLEMGISEDMYNPVATFLLAFIF 302
           KLLPTGR SS A+F+Y++ +GLG F LRY+PGL   +L EMGI E+MY P A F+ AF+ 
Sbjct: 224 KLLPTGR-SSFALFIYSTLLGLGGFLLRYLPGLFESLLTEMGIDEEMYTPAAIFVGAFLS 283

Query: 303 LIGAWLGFWVVHKFVLDEDGSIDTSTSLFVTWCIRILAALLILQCSLDPLLATGVLICGI 362
           L GA+ GFW V K +L EDGSID STSLFV+W IRI+AA+LILQ S+DPLLA G LI  I
Sbjct: 284 LGGAFFGFWTVRKLILTEDGSIDVSTSLFVSWSIRIMAAVLILQSSVDPLLAGGALISVI 343

Query: 363 MASSILRRTFKLRFLRRQYK---NLFKSPKRKLKRSHISDTPRF-----DDSDDELAMKS 422
           + SS L++  +L+FL R ++   NL       ++ + I   P +       S D    ++
Sbjct: 344 LMSSTLKKITRLKFLLRLFEIPLNLLLGIWEAIRDTDIPSVPGYLHDFMQKSPDASGFRN 403

Query: 423 PLSYEDPKFYGSQDRNFALQSCSLSERDEYPSTFHSTPGRREFSKDEWKRFTKDSTEKAL 482
            ++   P    S   N  ++    SE D +PS+FH TP R + +K+EWK+ TKDST KA+
Sbjct: 404 RVTSASP----SGGINNGMRESPPSESDTFPSSFHKTPERSQLTKEEWKKLTKDSTTKAV 463

Query: 483 EGLVSSPDFGRWLVDNADRINITP-QSSRRAEKGRKWLPW 514
           + LVSSPDFG+W   NADRIN+TP + S    + RKW+ W
Sbjct: 464 QELVSSPDFGKWAAVNADRINVTPRKGSSSKNQPRKWMRW 497

[Close]
BLAST of CmaCh02G005290 vs. TAIR 10
Match: AT3G49840.1 (Uncharacterized conserved protein (DUF2215) )

HSP 1 Score: 357.8 bits (917), Expect = 1.4e-98
Identity = 218/481 (45.32%), Postives = 304/481 (63.20%), Query Frame = 0 

Query: 28  NQKSSMVPSTLFRASTCLLFLALFFALAYSIPDPQPLRLVVSESTTLQLSRGLPVQNSPG 87
           +  S +V S+ F      L L  FF+L  S      L   V E+ +LQ++    V  SPG
Sbjct: 3   DSSSVIVRSSNFIVVILFLNLVTFFSLVSS----NELVFAVGETGSLQVTPRTEVIYSPG 62

Query: 88  SKPGTVVVCERVYIQGL-LRIKNLWKLAHTVKVKLSMINSSARIPNLEVCFHRNMSLGIG 147
            K G   +CER++I GL  R++++ + AH++K+ L   N+S    +++VCFHRN S  IG
Sbjct: 63  LKRGITSICERLHIHGLQRRLEHIDRYAHSLKLTLLSNNAS---NSIDVCFHRNSSRAIG 122

Query: 148 MCPQSQWEKVAKG-SWAQSMSPFDHKLIDIRTSGLS--LESFEVSIEEEFFMYRIIFLIL 207
           MCP +QW++V+KG  W   MSPFD+K++DIRT G S  + + E+  ++EFF+YRI+FLI+
Sbjct: 123 MCPDNQWKRVSKGLPWVGIMSPFDYKILDIRTFGGSSNVSTVELVAKQEFFIYRIVFLIM 182

Query: 208 GLVLMSSASILGKSLVFYYGSAMTIGVLLVVLMILFQGMKLLPTGRKSSLAIFLYASAVG 267
           G+VL+S AS L KS+ FYY  AM+IG++++V +I+ QG+K LPT  KS   +F Y+S +G
Sbjct: 183 GIVLLSLASRLSKSVAFYYIGAMSIGIVILVTLIINQGIKRLPTRGKSRFQLFFYSSMIG 242

Query: 268 LGSFFLRYIPGLLHQILLEMGISEDMYNPVATFLLAFIFLIGAWLGFWVVHKFVLDEDGS 327
           +G +FL+YI GL+  +L+++ ISED+Y P+A  L+ F+F++GAW GFW V KFV+ +DGS
Sbjct: 243 VGGYFLQYIRGLVQDLLMQIEISEDLYIPLAILLVVFVFMLGAWSGFWTVKKFVVTKDGS 302

Query: 328 IDTSTSLFVTWCIRILAALLILQCSLDPLLATGVLICGIMASSILRRTFKLRFLRRQYKN 387
           +D STS+FV+W IR  A  LILQ SLDPLLA G LI GI+ S IL               
Sbjct: 303 VDISTSIFVSWSIRAFAVALILQSSLDPLLAGGALITGILISLIL--------------- 362

Query: 388 LFKSPKRKLKRSHISDTPRFDDSDDELAMKSP-----LSYEDPKFYGSQDRNFALQSCSL 447
             KS  RKL         R  + DDE    SP      S+  P   GS   N  L++  L
Sbjct: 363 --KSISRKLL------AQRIYEQDDETESCSPGLIHATSFASPLPRGS---NKKLRTVPL 422

Query: 448 SERDEYPSTFHSTP-GRREFSKDEWKRFTKDSTEKALEGLVSSPDFGRWLVDNADRINIT 499
           SE D +PS+FH TP GRR+ +K+E ++FTK+STE AL+ LVSSP FG W V NA RI + 
Sbjct: 423 SESDIFPSSFHKTPEGRRKLTKEELQKFTKESTENALKELVSSPGFGEWAVKNAKRITVN 450

[Close]
BLAST of CmaCh02G005290 vs. TAIR 10
Match: AT1G28760.1 (Uncharacterized conserved protein (DUF2215) )

HSP 1 Score: 239.6 bits (610), Expect = 5.6e-63
Identity = 152/417 (36.45%), Postives = 232/417 (55.64%), Query Frame = 0 

Query: 96  CERVYIQGLLRIKNLWKLAHTVKVKLSMINSSARIPNLEVCFHRNMSLGIGMCPQSQWEK 155
           CER+ + G  R K L K A++++V L  I     +  ++VC HRN +LG+  C +S W+ 
Sbjct: 49  CERIQVSGYSRTK-LGKFANSLRVNLVPIPEKLHL-KIQVCVHRNATLGMCHCEKSNWKN 108

Query: 156 VAKGSWAQSMSPFDHKLIDIRTSGLSLES----FEVSIEEEFFMYRIIFLILGLVLMSSA 215
           +   S    +SP+D + ID+R +G   +S      V++ EEF  +RI  L+ GL+++  A
Sbjct: 109 LQSSS---VISPYDKQYIDVRFTGSEYQSSRSMITVNVTEEFHQWRIFCLVAGLIVILLA 168

Query: 216 SILGKSLVFYYGSAMTIGVLLVVLMILFQGMKLLPTGRKSSLAIFLYASAVGLGSFFLRY 275
            ++   L FYY S+M +GV LVVL+I+FQ M+LLPTGRK+ + +  Y S VG GSF L  
Sbjct: 169 PVVSSWLPFYYTSSMAVGVFLVVLIIIFQVMRLLPTGRKNVMYLAFYGSVVGAGSFILHQ 228

Query: 276 IPGLLHQILLEMGISEDMYNPVATFLLAFIFLIGAWLGFWVVHKFVLDED-GSIDTSTSL 335
              +++ IL+  G+SEDMYNPVA  +L  + + GA  GFW V KFV+ +D G +D S + 
Sbjct: 229 FSMMVNMILVNFGLSEDMYNPVAILVLVGVVITGAAFGFWTVRKFVVSKDGGGVDASVAQ 288

Query: 336 FVTWCIRILAALLILQCSLDPLLATGVLICGIMASSILRRTFKLRFLRRQYKNLFKSPKR 395
           FV W +R +AA  ILQ SLD  +A G  +   +   ++ +T    F+ + +  +    +R
Sbjct: 289 FVKWAMRSVAATFILQSSLDTPMAMGAFVLASLFGFLVSKT--KSFVGKSHWLVSAGERR 348

Query: 396 KLKRSHISDTPRFDDSDDELAMKSPLSYEDPKFYGSQDRNFALQSCSLSER------DEY 455
            +         R        + KS      P + GS   +  + S S   R       +Y
Sbjct: 349 PIMHGRAEFLSRPGGGGLWKSAKSV-----PSYSGSPSYDVIVSSPSSVNRRIPIGNQDY 408

Query: 456 PSTFHSTPGRREFSKDEWKRFTKDSTEKALEGLVSSPDFGRWLVDNADRINITPQSS 502
            STFH+TP R+  SK E+   T+++T +A+ GL +SP F  WLV++ADRI + P  S
Sbjct: 409 YSTFHTTPNRKRMSKREYDELTQETTREAMAGLAASPGFSDWLVEHADRIKLLPTDS 453

The following BLAST results are available for this feature:
BLAST of CmaCh02G005290 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh02G005290 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G67610.15.0e-12048.97Uncharacterized conserved protein (DUF2215) [more]
AT5G67610.26.6e-12050.65Uncharacterized conserved protein (DUF2215) [more]
AT3G49840.11.4e-9845.32Uncharacterized conserved protein (DUF2215) [more]
AT1G28760.15.6e-6336.45Uncharacterized conserved protein (DUF2215) [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019358NEMP familyPFAMPF10225NEMPcoord: 186..393
e-value: 1.0E-45
score: 156.4
NoneNo IPR availablePANTHERPTHR31587TRANSMEMBRANE PROTEIN (DUF2215)coord: 44..503
NoneNo IPR availablePANTHERPTHR31587:SF4TRANSMEMBRANE PROTEIN (DUF2215)coord: 44..503

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh02G005290.1CmaCh02G005290.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005637 nuclear inner membrane