CmaCh02G004630 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTCTTTTGCCATCTGTATTATTTGCGAACCTAAACAACCGCCAAGCCACAACGCACCTCTCAAGGTCATTCTTCCTCTGTCTCTCTCTCTCTCTCTCTCTCGAAGAACTTGGATTTGAAACTTCTCCGGTGGATCAGACGGAGCAGCATGGCGGTTGGTGTTCAATTTTTCCTTCTTTTTCTGTTCATTTTGTTCCTAATCTTTTTGATTTCTGGCGATGTTATTACCTCAAATTTCATTTTGTTGTGAGGCGTGATTTTTTCTTCTTATTAACTACTTAATATAGGTGAAACAGCATGTTTCATTGTTTTTTCCTCCCGTAATTTTGATGAACAAATGCGTGACTCGTACTCAGGAGATGGAGAATGCGTACTTCCGTTGTAATTATGGCTGTATTGGAATTTAATGTTTCGAACAAGAAATAAGGAAATTATTGAAAGCACCTAAAACGTCTAAATTCGTCTTTGATTTTCCAGAAACTGACTTGATTTAGGTTGTTTTTTTGTTTAATCGTTACAGTCGCAGGTGAGAACGGTGAGAGTTACCAATGTCTCGTTGAGCGCGTCGGAGAAAGATTTGAGAGACTTTTTTTCTTTTTCCGGTGAAATTGAATTTGTCGAAATGCGAAAGTAAGTGTTATTTACTACTGTCTCGAAATTGTATTTTAGTTCGTTAGGTATATGGTGATTAGCAGTAGGATTGTTACTTTTTTCTTCTTGATCAACTGTTAGTTCGTATGCGTTTTCATTTACTTCATTTTGTTTTCTTGCAGGGACAATGAACGATCTCAAATTGCATTTGTTACCTTCAAGGATCAGAAAGGAGCCGAGACATCGATTCTACTCTCGGTTGATACAATTCTCTATTCTTCCCTTTCTTCATTTCAATTGTCCGTAAACTTAAGATATTCTGAATTAGAAACTGTTTACTTAAGCTTCCATTAGAAACTGTTTCAGGAATGTAGAACCTCTCTTATGTTATGAAATTGGCTCTAAGGTTTGAAAATTACTTAGAACAGAGTTTCATTCTTCAGATAGAAGAGGTTAAACAAAGTTCTCATCCATTTGTTTCGAATGTCTTCAATATGATTGCCGTGATGTGTTCAAAATGCATAGTTAACTTGATTTCTATGTCTCATTACCAAGTGATTTTTTCTTGTTTCATCTGTTTTCTTACCTTGATTAAACTGTCTTGCGTTTCTCAGGGAGCTACAATTGTTGATCAGCCTGTTAGCATTGCTACTGCTCCAGATTACAATCTTCCTGCTGTACCTGCCAGTGCCCCTCTACCAGTGTCTTCTCCAGTATTTTCTTCGATCTTAATCCTACAGTAATTTTCAATCCTGTCTTTCCAATTTCTGACATGAATGAACAAACATGTTTCACCAGTCTGCAGAGAACGCAGGCTCTGGTACTGCTGGATCTGCAATGCAAAAGGCCGAGGATGTTGTGAGCAGCATGCTGGCTAAAGGCTTCACTTTGGGCAAAGATACCCTCAATAGGGCAAAGTCTTTTGACCAGAAGCACCAATTGACATCAACAGCCTCATCGAAAGTCCTTTCTCTGGACCAAAAGATCGGCCTTAGCGAGAAGATTAGCGTTGGCACGACAGTGGTGAATGAGAAAGTGAAAGAAATGGATGAGAAGTTTCAAGTGTCTGAGAAAACCAAGGCTGCGGTGAACAATGCAGGAACAGCCTTAATGGCTAACCGGTACGTCTCAACCGGGGCTTCCTGGGTTACCCAGACGTTTCAAAGAGTCGCAAAAGCGGCCGTAGAAGTCAGTCACAAAACAAAGGAGAAGGTTTTAGCTGAGGATCAAGCTAAACAAGAGGGAAGATCTTAATTCATCCAAGAATCGCTGCAAGTCCAAACTTGTGTAGCCCTGATCATACCCCAACATATATATCACATGTATTTGGCCAAAACAATGTGAGGAGTGAGGACCTATTCTTCTTAGCTTGCTATTTTCATCTCGGTTGATTGACATATTTTCAATGCCTTGTTTTAGTTTTTTGTATCAGGGAGTACATAAATAAGCTACATGCTTATGTTGTAATTCAACCGTAAGAAAAACATATATGCTATGTGATTAAGTGTCCAGAAATGATCTTTATAAACATTATTTGCATA CTTTCTTTTGCCATCTGTATTATTTGCGAACCTAAACAACCGCCAAGCCACAACGCACCTCTCAAGGTCATTCTTCCTCTGTCTCTCTCTCTCTCTCTCTCTCGAAGAACTTGGATTTGAAACTTCTCCGGTGGATCAGACGGAGCAGCATGGCGTCGCAGGTGAGAACGGTGAGAGTTACCAATGTCTCGTTGAGCGCGTCGGAGAAAGATTTGAGAGACTTTTTTTCTTTTTCCGGTGAAATTGAATTTGTCGAAATGCGAAAGGACAATGAACGATCTCAAATTGCATTTGTTACCTTCAAGGATCAGAAAGGAGCCGAGACATCGATTCTACTCTCGGGAGCTACAATTGTTGATCAGCCTGTTAGCATTGCTACTGCTCCAGATTACAATCTTCCTGCTGTACCTGCCAGTGCCCCTCTACCAGTGTCTTCTCCATCTGCAGAGAACGCAGGCTCTGGTACTGCTGGATCTGCAATGCAAAAGGCCGAGGATGTTGTGAGCAGCATGCTGGCTAAAGGCTTCACTTTGGGCAAAGATACCCTCAATAGGGCAAAGTCTTTTGACCAGAAGCACCAATTGACATCAACAGCCTCATCGAAAGTCCTTTCTCTGGACCAAAAGATCGGCCTTAGCGAGAAGATTAGCGTTGGCACGACAGTGGTGAATGAGAAAGTGAAAGAAATGGATGAGAAGTTTCAAGTGTCTGAGAAAACCAAGGCTGCGGTGAACAATGCAGGAACAGCCTTAATGGCTAACCGGTACGTCTCAACCGGGGCTTCCTGGGTTACCCAGACGTTTCAAAGAGTCGCAAAAGCGGCCGTAGAAGTCAGTCACAAAACAAAGGAGAAGGTTTTAGCTGAGGATCAAGCTAAACAAGAGGGAAGATCTTAATTCATCCAAGAATCGCTGCAAGTCCAAACTTGTGTAGCCCTGATCATACCCCAACATATATATCACATGTATTTGGCCAAAACAATGTGAGGAGTGAGGACCTATTCTTCTTAGCTTGCTATTTTCATCTCGGTTGATTGACATATTTTCAATGCCTTGTTTTAGTTTTTTGTATCAGGGAGTACATAAATAAGCTACATGCTTATGTTGTAATTCAACCGTAAGAAAAACATATATGCTATGTGATTAAGTGTCCAGAAATGATCTTTATAAACATTATTTGCATA ATGGCGTCGCAGGTGAGAACGGTGAGAGTTACCAATGTCTCGTTGAGCGCGTCGGAGAAAGATTTGAGAGACTTTTTTTCTTTTTCCGGTGAAATTGAATTTGTCGAAATGCGAAAGGACAATGAACGATCTCAAATTGCATTTGTTACCTTCAAGGATCAGAAAGGAGCCGAGACATCGATTCTACTCTCGGGAGCTACAATTGTTGATCAGCCTGTTAGCATTGCTACTGCTCCAGATTACAATCTTCCTGCTGTACCTGCCAGTGCCCCTCTACCAGTGTCTTCTCCATCTGCAGAGAACGCAGGCTCTGGTACTGCTGGATCTGCAATGCAAAAGGCCGAGGATGTTGTGAGCAGCATGCTGGCTAAAGGCTTCACTTTGGGCAAAGATACCCTCAATAGGGCAAAGTCTTTTGACCAGAAGCACCAATTGACATCAACAGCCTCATCGAAAGTCCTTTCTCTGGACCAAAAGATCGGCCTTAGCGAGAAGATTAGCGTTGGCACGACAGTGGTGAATGAGAAAGTGAAAGAAATGGATGAGAAGTTTCAAGTGTCTGAGAAAACCAAGGCTGCGGTGAACAATGCAGGAACAGCCTTAATGGCTAACCGGTACGTCTCAACCGGGGCTTCCTGGGTTACCCAGACGTTTCAAAGAGTCGCAAAAGCGGCCGTAGAAGTCAGTCACAAAACAAAGGAGAAGGTTTTAGCTGAGGATCAAGCTAAACAAGAGGGAAGATCTTAA MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAPLPVSSPSAENAGSGTAGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS Homology
BLAST of CmaCh02G004630 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 1.0e-59 Identity = 138/250 (55.20%), Postives = 184/250 (73.60%), Query Frame = 0
BLAST of CmaCh02G004630 vs. ExPASy Swiss-Prot
Match: P87216 (Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=vip1 PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.3e-06 Identity = 52/186 (27.96%), Postives = 90/186 (48.39%), Query Frame = 0
BLAST of CmaCh02G004630 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 246.1 bits (627), Expect = 2.9e-65 Identity = 140/247 (56.68%), Postives = 189/247 (76.52%), Query Frame = 0
BLAST of CmaCh02G004630 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 241.5 bits (615), Expect = 7.2e-64 Identity = 133/247 (53.85%), Postives = 190/247 (76.92%), Query Frame = 0
BLAST of CmaCh02G004630 vs. TAIR 10
Match: AT5G16840.2 (binding partner of acd11 1 ) HSP 1 Score: 236.1 bits (601), Expect = 3.0e-62 Identity = 138/250 (55.20%), Postives = 184/250 (73.60%), Query Frame = 0
BLAST of CmaCh02G004630 vs. TAIR 10
Match: AT5G16840.1 (binding partner of acd11 1 ) HSP 1 Score: 231.5 bits (589), Expect = 7.4e-61 Identity = 138/250 (55.20%), Postives = 184/250 (73.60%), Query Frame = 0
BLAST of CmaCh02G004630 vs. TAIR 10
Match: AT5G16840.3 (binding partner of acd11 1 ) HSP 1 Score: 224.9 bits (572), Expect = 6.9e-59 Identity = 134/246 (54.47%), Postives = 180/246 (73.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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