CmaCh02G004150 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh02G004150
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionCASP-like protein
LocationCma_Chr02: 2111199 .. 2113928 (+)
RNA-Seq ExpressionCmaCh02G004150
SyntenyCmaCh02G004150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAATTTCTGCGGCTGATTTGGCTCTCGAAGCTCTGAGAACGTGCCACCCAAAAACAAGAAACGGCCCCCGGGAGTCTCAATTCCAACGCCCCGCCCTTCTCTACGCTTCACTTTTCTGTAACACCCATCTCCGGATTCGACCTCTAAACCCCTTTTCACCGGAAAACTCGCCGGATTCTTCATCGGGACCAAAATTGTTCACCAGAGAATCAAAATAGACTCCGTTGATTTGGATGTGAGCGGCTATGGTGGAGCATTGAGCGATTAAGATGAGTGGTTTTGAGGGGAAGAAGAAATGGGGAATTTGTGGGGTTAGGAATCACATTCACCGGCGCCGCCATGGACGTGGTACCTGGGTCGGTGGGAACCGGCGGTAGTTTCTCTTTAAGACTGGGCCAGACTGTGTTCTCTTCCGCTTCGCTTCTTTTCATGTCTTTGGGTATTGAGTTCTACAGCTACACTGCTTTCTGGTGATTACCTTTTCCCCCTTTTCTTTGGATTGCTTTTGATTCTGTTCTTGGTGGTTTGTATGATCCATGGAAGATGAGTTGATTGGCTTGAAAATCTCTGAAATTAAGCCTTGATGGGATTTGGGTTTGTGTTGTTGAGATGAATGAATGTGAAGAACTTACTTGATCTTGGTTAGGATCTGCGAAGCTTTTGAATGTTCTGTTTAAGGAAACTAGTTTTGATAATGCTTGCAGGCAATATACAAATAACTTGTTGGTTAAACCATACAACTTTGAGCTATGAGTTTATTTAGCATGTTATCTATATGCTAGTATGCCCTTTTGTGGTGGTTTTCTCTTGCTGACTTCATTGAGATTTGCCACCAAACACCTCCTTTGGATCTATCTGCAATTCTGTTGTTTCAAACTTGAGTTATATGCAAAAACAAGCTCATTCAGAAGATTATTCATAGCTTTGTCCTAGCATCTGATTCGAAAGAAAACAGATCGAAGTTTATCTTATAGTTTATGGAATAGGTTATCTAGGATATGTAGGTGGATGTGTGAGATTCCATATCGGTTGGGAGGAGAATGATGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGTTCACACGTTTTAAAAACCTTGAAGGGAAGTCTGAAAGGGGAAGCCCAAAGAGGACAATATCTGCTAGTGCTGGGCTTGGGTTATTACAAATGGTATCAGAGTCAGACACCAGGCGATGTGCCAACGAGGACCAAAGGAGGGTGGACATGAGGGGTGTGCTAGTGAGGAGGTTGAGCCCCGAAGGGGGTAGACACGAGGAGTGTGCCAGTAAGGAGGCTGAGCCCTGAAGGAGGGTGGACACGAGGGGTGTGCCATCAAGAAGGCTGAGTCTTGCAGGGGGCTACACCGAGGGGTGTGCCAGCAAGGACGCTGTGCCTCGAAGGGACGTGGATTGGGGGGTCCCATATCGATTGGAGATAGGAACGAGTGCCAATGAGGATGTTGGTCCCGAAGGGTGATGGATTGTGAGATCCCACATCGGTTGGGTGGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCTCTAGTAGACGCGTTTTAAAAACCTTGAGGGGAAAAAACCCAAAGAGGACAATATCTGCTAGCGGTGGGCTTGGGCTGTTACAAATGGTATCAGAGCCAGACACGGGACGATGTGCCAGCAAGGAAGTTGAACCCCACCCCAAAAGGGGATAGATTGGGAGGTCCCACATCGATTGGAGAAGAGAGCGAGTGTCAGCGAAGATGTTGGACCTAAAGGGGGTGGATTGTGAGATCCCACATCGGCTAGGGAGGAGAACAAACATTATTTATAAGGGTGTGAAAACCTCTCCCTAGCAGACGTGTTTTAAAAACCTTGAGGGAAATTCCGAAATGGAAAGCCCAAAAAAAACAATATCGGTTAGCGGTGGGCTTAAGCTGTTGCATGATCAATCCATTTGGTTTAAAGTAAAATAGTTCATGAGATTATCTGAACTGAACTCGACCGTCTATTTGTTTATCTTATAGGCTACTCTTCTGGGATTCCATGATTTTGCTTTGGATATTAATCTTTCCATTGTTGTACATCAATGCAGCTACCTTGTGACAGTAATGGGTTTGGTCATACCCTGGAGCTTCACCTTAGCATTGGTTGATGGCTATTCAGTTCTTGTAAAATGTCCTCTTCGACAGCCCGGAATCCTCACGATCATCATCGTCGGAGATTGGGTAAGTACTTCTTCTTGAATGCATTAAACTTTCAGTTTCAGGATGCTTTGGTTTTGGTATTCAAACCATTTGCTTGAAGAACAGGTGCTCTCACTTCTTACACTGGCTGCTGCTTGCTCGACAGCGAGTGTCGTCGACATACTGCTTCTTTCGGACAGTTCGTATTGCCCGTCGAAGCTGTGCAGGAGATATCAAATATCTGCTGCCATGGCCTTCTTGTCATGGTTTTTGTCTTATGCTTCTTCTCTTTTCAATCTTTGGTTACTTCCATCCTTATAGTGTTCATAACTCCTAACCTCTAATTTGCTGAAGTTCTGTATCCATAGACTTATGCACTCATTTTGTTCTGAATTAGAAACTTGTACACTTATTTTGTTCTCAAGTTGGATGAGATTTTAGGCAAGGAACCGAACTACCCAAATTCAAACAAAAAAAAATCTATCCCAACCCAATTTTTATGATTTGAATTGGGTAGTCTAAGTAGACGGGATTCCTAAATGATATGAATACCTA

mRNA sequence

CAAAATTTCTGCGGCTGATTTGGCTCTCGAAGCTCTGAGAACGTGCCACCCAAAAACAAGAAACGGCCCCCGGGAGTCTCAATTCCAACGCCCCGCCCTTCTCTACGCTTCACTTTTCTGTAACACCCATCTCCGGATTCGACCTCTAAACCCCTTTTCACCGGAAAACTCGCCGGATTCTTCATCGGGACCAAAATTGTTCACCAGAGAATCAAAATAGACTCCGTTGATTTGGATGTGAGCGGCTATGGTGGAGCATTGAGCGATTAAGATGAGTGGTTTTGAGGGGAAGAAGAAATGGGGAATTTGTGGGGTTAGGAATCACATTCACCGGCGCCGCCATGGACGTGGTACCTGGGTCGGTGGGAACCGGCGGTAGTTTCTCTTTAAGACTGGGCCAGACTGTGTTCTCTTCCGCTTCGCTTCTTTTCATGTCTTTGGGTATTGAGTTCTACAGCTACACTGCTTTCTGCTACCTTGTGACAGTAATGGGTTTGGTCATACCCTGGAGCTTCACCTTAGCATTGGTTGATGGCTATTCAGTTCTTGTAAAATGTCCTCTTCGACAGCCCGGAATCCTCACGATCATCATCGTCGGAGATTGGGTGCTCTCACTTCTTACACTGGCTGCTGCTTGCTCGACAGCGAGTGTCGTCGACATACTGCTTCTTTCGGACAGTTCGTATTGCCCGTCGAAGCTGTGCAGGAGATATCAAATATCTGCTGCCATGGCCTTCTTGTCATGGTTTTTGTCTTATGCTTCTTCTCTTTTCAATCTTTGGTTACTTCCATCCTTATAGTGTTCATAACTCCTAACCTCTAATTTGCTGAAGTTCTGTATCCATAGACTTATGCACTCATTTTGTTCTGAATTAGAAACTTGTACACTTATTTTGTTCTCAAGTTGGATGAGATTTTAGGCAAGGAACCGAACTACCCAAATTCAAACAAAAAAAAATCTATCCCAACCCAATTTTTATGATTTGAATTGGGTAGTCTAAGTAGACGGGATTCCTAAATGATATGAATACCTA

Coding sequence (CDS)

ATGGACGTGGTACCTGGGTCGGTGGGAACCGGCGGTAGTTTCTCTTTAAGACTGGGCCAGACTGTGTTCTCTTCCGCTTCGCTTCTTTTCATGTCTTTGGGTATTGAGTTCTACAGCTACACTGCTTTCTGCTACCTTGTGACAGTAATGGGTTTGGTCATACCCTGGAGCTTCACCTTAGCATTGGTTGATGGCTATTCAGTTCTTGTAAAATGTCCTCTTCGACAGCCCGGAATCCTCACGATCATCATCGTCGGAGATTGGGTGCTCTCACTTCTTACACTGGCTGCTGCTTGCTCGACAGCGAGTGTCGTCGACATACTGCTTCTTTCGGACAGTTCGTATTGCCCGTCGAAGCTGTGCAGGAGATATCAAATATCTGCTGCCATGGCCTTCTTGTCATGGTTTTTGTCTTATGCTTCTTCTCTTTTCAATCTTTGGTTACTTCCATCCTTATAG

Protein sequence

MDVVPGSVGTGGSFSLRLGQTVFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDGYSVLVKCPLRQPGILTIIIVGDWVLSLLTLAAACSTASVVDILLLSDSSYCPSKLCRRYQISAAMAFLSWFLSYASSLFNLWLLPSL
Homology
BLAST of CmaCh02G004150 vs. ExPASy Swiss-Prot
Match: Q10EJ2 (CASP-like protein 5C1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0767900 PE=2 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.3e-49
Identity = 96/146 (65.75%), Postives = 124/146 (84.93%), Query Frame = 0

Query: 6   GSVGTGGSFSLRLGQTVFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDG 65
           G+VG+ GS  LR+GQ VFSSASLLFMS+G+EF+SYTAFC+LVT+MGLVIPWS TLA++D 
Sbjct: 10  GAVGSAGSLGLRVGQAVFSSASLLFMSVGVEFFSYTAFCFLVTIMGLVIPWSCTLAMIDV 69

Query: 66  YSVLVKCPLRQPGILTIIIVGDWVLSLLTLAAACSTASVVDILLLSDSSYCPSKLCRRYQ 125
           YS+LV CPLR PG++ I+++GDWVL++L+LAAA S+A+V+D+LL    S+C  + C RYQ
Sbjct: 70  YSILVGCPLRVPGVMVIVVIGDWVLAILSLAAASSSAAVIDLLLQFHGSHCSPRFCGRYQ 129

Query: 126 ISAAMAFLSWFLSYASSLFNLWLLPS 152
           +SA MAFLSWFL+ ASSLFNLW + S
Sbjct: 130 LSAMMAFLSWFLTAASSLFNLWFIAS 155

BLAST of CmaCh02G004150 vs. ExPASy Swiss-Prot
Match: B8BPI2 (CASP-like protein 5C1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_38237 PE=2 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.9e-48
Identity = 95/146 (65.07%), Postives = 123/146 (84.25%), Query Frame = 0

Query: 6   GSVGTGGSFSLRLGQTVFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDG 65
           G+VG+ GS  LR+ Q VFSSASLLFMS+G+EF+SYTAFC+LVT+MGLVIPWS TLA++D 
Sbjct: 10  GAVGSAGSLGLRVEQAVFSSASLLFMSVGVEFFSYTAFCFLVTIMGLVIPWSCTLAMIDV 69

Query: 66  YSVLVKCPLRQPGILTIIIVGDWVLSLLTLAAACSTASVVDILLLSDSSYCPSKLCRRYQ 125
           YS+LV CPLR PG++ I+++GDWVL++L+LAAA S+A+V+D+LL    S+C  + C RYQ
Sbjct: 70  YSILVGCPLRVPGVMVIVVIGDWVLAILSLAAASSSAAVIDLLLQFHGSHCSPRFCGRYQ 129

Query: 126 ISAAMAFLSWFLSYASSLFNLWLLPS 152
           +SA MAFLSWFL+ ASSLFNLW + S
Sbjct: 130 LSAMMAFLSWFLTAASSLFNLWFIAS 155

BLAST of CmaCh02G004150 vs. ExPASy Swiss-Prot
Match: B6U300 (CASP-like protein 5C1 OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 179.9 bits (455), Expect = 2.2e-44
Identity = 91/146 (62.33%), Postives = 116/146 (79.45%), Query Frame = 0

Query: 6   GSVGTGGSFSLRLGQTVFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDG 65
           G+VG+ GS  LR+GQ VFSSASLLFMS+G+EF+SYTAFC+LVT+MGLVIPWS TLA++D 
Sbjct: 12  GAVGSAGSLGLRVGQAVFSSASLLFMSVGVEFFSYTAFCFLVTIMGLVIPWSCTLAMIDV 71

Query: 66  YSVLVKCPLRQPGILTIIIVGDWVLSLLTLAAACSTASVVDILLLSDSSYCPSKLCRRYQ 125
           YSV V CPLR PG++ I++VGD  LS+++ AAACS+A+V+D+LL    S+     C RYQ
Sbjct: 72  YSVFVGCPLRVPGVMVIVVVGDCALSIVSFAAACSSAAVIDLLLQLHGSHSSPTFCGRYQ 131

Query: 126 ISAAMAFLSWFLSYASSLFNLWLLPS 152
           +SA MAFLSW L  AS+ FNLW + S
Sbjct: 132 LSAMMAFLSWLLMAASATFNLWFVAS 157

BLAST of CmaCh02G004150 vs. ExPASy Swiss-Prot
Match: Q3ECT8 (CASP-like protein 5C3 OS=Arabidopsis thaliana OX=3702 GN=At1g49405 PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.9e-43
Identity = 93/149 (62.42%), Postives = 117/149 (78.52%), Query Frame = 0

Query: 4   VPGSVGTGGSFSLRLGQTVFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALV 63
           VPGSVGT  S SLRLGQ V +  SLLFM++G+ FY +TAFCYLVT+M L IPW+ TLA+V
Sbjct: 4   VPGSVGTTASLSLRLGQMVLAFGSLLFMTIGVRFYQFTAFCYLVTIMSLAIPWNLTLAMV 63

Query: 64  DGYSVLVKCPLRQPGILTIIIVGDWVLSLLTLAAACSTASVVDILLLSDSSYCPSKLCRR 123
           D Y V+++ P ++P IL  I +GDWV+S+L LA+A S ASVVDIL  ++SS CP  +C R
Sbjct: 64  DIYCVILQQPFQKPRILLAISIGDWVVSVLALASASSAASVVDILRSNESS-CPPTICNR 123

Query: 124 YQISAAMAFLSWFLSYASSLFNLWLLPSL 153
           YQ +A +AFL+WFLS +SSLFNLWLLPSL
Sbjct: 124 YQFAATLAFLTWFLSLSSSLFNLWLLPSL 151

BLAST of CmaCh02G004150 vs. ExPASy Swiss-Prot
Match: D7LTJ4 (CASP-like protein ARALYDRAFT_485429 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_485429 PE=3 SV=2)

HSP 1 Score: 161.8 bits (408), Expect = 6.2e-39
Identity = 84/152 (55.26%), Postives = 107/152 (70.39%), Query Frame = 0

Query: 1   MDVVPGSVGTGGSFSLRLGQTVFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTL 60
           M+ VPGS GT  SF+LR GQT+FS+ASL+FM    +FY +T FCYL TVM +V PWS  L
Sbjct: 1   MENVPGSFGTSASFALRFGQTIFSAASLIFMCFDYDFYDFTTFCYLATVMAIVTPWSILL 60

Query: 61  ALVDGYSVLVKCPLRQPGILTIIIVGDWVLSLLTLAAACSTASVVDILLLSDSSYCPSKL 120
           AL D YSVLVK   ++  +L+I+  GD+VLS L+L  AC+ AS  ++L  +D   C   L
Sbjct: 61  ALTDTYSVLVKLLPQELRVLSIVFAGDFVLSFLSLGGACAVASATELLASADGKICDGNL 120

Query: 121 CRRYQISAAMAFLSWFLSYASSLFNLWLLPSL 153
           C +YQ+SAA+AFL WFL  AS+LFN W LPSL
Sbjct: 121 CIQYQVSAALAFLCWFLLLASALFNFWSLPSL 152

BLAST of CmaCh02G004150 vs. TAIR 10
Match: AT1G49405.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 176.8 bits (447), Expect = 1.3e-44
Identity = 93/149 (62.42%), Postives = 117/149 (78.52%), Query Frame = 0

Query: 4   VPGSVGTGGSFSLRLGQTVFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALV 63
           VPGSVGT  S SLRLGQ V +  SLLFM++G+ FY +TAFCYLVT+M L IPW+ TLA+V
Sbjct: 4   VPGSVGTTASLSLRLGQMVLAFGSLLFMTIGVRFYQFTAFCYLVTIMSLAIPWNLTLAMV 63

Query: 64  DGYSVLVKCPLRQPGILTIIIVGDWVLSLLTLAAACSTASVVDILLLSDSSYCPSKLCRR 123
           D Y V+++ P ++P IL  I +GDWV+S+L LA+A S ASVVDIL  ++SS CP  +C R
Sbjct: 64  DIYCVILQQPFQKPRILLAISIGDWVVSVLALASASSAASVVDILRSNESS-CPPTICNR 123

Query: 124 YQISAAMAFLSWFLSYASSLFNLWLLPSL 153
           YQ +A +AFL+WFLS +SSLFNLWLLPSL
Sbjct: 124 YQFAATLAFLTWFLSLSSSLFNLWLLPSL 151

BLAST of CmaCh02G004150 vs. TAIR 10
Match: AT3G50810.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 159.8 bits (403), Expect = 1.7e-39
Identity = 83/152 (54.61%), Postives = 106/152 (69.74%), Query Frame = 0

Query: 1   MDVVPGSVGTGGSFSLRLGQTVFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTL 60
           M+ VPGS GT  SF+LR GQT+FS+ASL+FM    +FY +T FCYL  VM +V PWS  L
Sbjct: 1   MEHVPGSFGTSASFALRFGQTIFSAASLIFMCFDFDFYDFTTFCYLAMVMAIVTPWSILL 60

Query: 61  ALVDGYSVLVKCPLRQPGILTIIIVGDWVLSLLTLAAACSTASVVDILLLSDSSYCPSKL 120
           AL D YSVLVK   ++  +L+I+  GD+VLS L+L  AC+ AS  ++L  +D   C   L
Sbjct: 61  ALTDTYSVLVKLLPQELRVLSIVFAGDFVLSFLSLGGACAVASATELLASADGKICDGSL 120

Query: 121 CRRYQISAAMAFLSWFLSYASSLFNLWLLPSL 153
           C +YQ+SAA+AFL WFL  AS+LFN W LPSL
Sbjct: 121 CIQYQVSAALAFLCWFLLLASALFNFWSLPSL 152

BLAST of CmaCh02G004150 vs. TAIR 10
Match: AT4G37235.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 146.4 bits (368), Expect = 1.9e-35
Identity = 89/148 (60.14%), Postives = 108/148 (72.97%), Query Frame = 0

Query: 7   SVGTGGSFSLRLGQTVFSSASLLFMSLG--IEFYSYTAFCYLVTVMGLVIPWSFTLALVD 66
           S GT  SF LRLGQT+FSSASLLFM      +FY+YT FCYLVTVMGLV PWS TLAL++
Sbjct: 7   SFGTSSSFVLRLGQTLFSSASLLFMCFNDDEDFYAYTTFCYLVTVMGLVTPWSVTLALME 66

Query: 67  GYSVLVKCPLRQPGILTIIIVGDWVLSLLTLAAACSTASVVDILLLSDSSYCPSKLCRRY 126
            YS+LVK    Q  ++++I+ GD+VLS L+L  ACSTASV   +LL D+     K C RY
Sbjct: 67  AYSILVKKLPMQATVISVIVAGDFVLSFLSLGGACSTASVA--VLLMDAG---EKQCDRY 126

Query: 127 QISAAMAFLSWFLSYASSLFNLWLLPSL 153
           ++SA MAFLS FLS+AS+ FN  LLPSL
Sbjct: 127 KLSATMAFLSSFLSFASTFFNFCLLPSL 149

BLAST of CmaCh02G004150 vs. TAIR 10
Match: AT5G02060.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 110.9 bits (276), Expect = 8.9e-25
Identity = 67/147 (45.58%), Postives = 92/147 (62.59%), Query Frame = 0

Query: 6   GSVGTGGSFSLRLGQTVFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALVDG 65
           GS GT     LRLGQ   ++AS+  M    +F +YTAFC+LV  MGL + WSF LA +D 
Sbjct: 6   GSPGTMSGLILRLGQCATAAASIGVMVSSYDFSNYTAFCFLVASMGLQLIWSFGLACLDV 65

Query: 66  YSVLVKCPLRQPGILTIIIVGDWVLSLLTLAAACSTASVVDILLLSDSSYC---PSKLCR 125
           Y++  K  LR P +L++  VGDWV +LL LAAACS+A V  +L   D+ +C   P+  C 
Sbjct: 66  YAIRRKSDLRSPILLSLFTVGDWVTALLALAAACSSAGVT-VLFTKDTEFCRQQPALSCD 125

Query: 126 RYQISAAMAFLSWFLSYASSLFNLWLL 150
           R+QIS  ++F +WFL+  SS    W+L
Sbjct: 126 RFQISVGLSFFNWFLAAISSHTMFWIL 151

BLAST of CmaCh02G004150 vs. TAIR 10
Match: AT3G23200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 108.2 bits (269), Expect = 5.8e-24
Identity = 63/149 (42.28%), Postives = 93/149 (62.42%), Query Frame = 0

Query: 4   VPGSVGTGGSFSLRLGQTVFSSASLLFMSLGIEFYSYTAFCYLVTVMGLVIPWSFTLALV 63
           +PG+ GT     LR+ Q VF++ S+ +M     F+S+TAFCYL+  MGL + WSF LA++
Sbjct: 4   IPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGLAIL 63

Query: 64  DGYSVLVKCPLRQPGILTIIIVGDWVLSLLTLAAACSTASVVDILLLSDSSYCPSKL-CR 123
           D ++++ K  L  P ++++ +VGDWV S L+LA A S+A +  +L   D   C  +  C 
Sbjct: 64  DTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGIT-VLYFGDLGSCSFEAECW 123

Query: 124 RYQISAAMAFLSWFLSYASSLFNLWLLPS 152
           +YQ+S A+AFL W     SSL  LWLL S
Sbjct: 124 KYQLSVALAFLCWITIAVSSLTTLWLLAS 151

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q10EJ22.3e-4965.75CASP-like protein 5C1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0767900 P... [more]
B8BPI21.9e-4865.07CASP-like protein 5C1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_38237 PE=2 S... [more]
B6U3002.2e-4462.33CASP-like protein 5C1 OS=Zea mays OX=4577 PE=2 SV=2[more]
Q3ECT81.9e-4362.42CASP-like protein 5C3 OS=Arabidopsis thaliana OX=3702 GN=At1g49405 PE=2 SV=1[more]
D7LTJ46.2e-3955.26CASP-like protein ARALYDRAFT_485429 OS=Arabidopsis lyrata subsp. lyrata OX=81972... [more]
Match NameE-valueIdentityDescription
AT1G49405.11.3e-4462.42Uncharacterised protein family (UPF0497) [more]
AT3G50810.11.7e-3954.61Uncharacterised protein family (UPF0497) [more]
AT4G37235.11.9e-3560.14Uncharacterised protein family (UPF0497) [more]
AT5G02060.18.9e-2545.58Uncharacterised protein family (UPF0497) [more]
AT3G23200.15.8e-2442.28Uncharacterised protein family (UPF0497) [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006702Casparian strip membrane protein domainPFAMPF04535DUF588coord: 10..137
e-value: 2.3E-23
score: 82.7
NoneNo IPR availablePANTHERPTHR32021:SF32CASP-LIKE PROTEIN 5C3coord: 1..151
IPR045009CASP-like protein 5PANTHERPTHR32021CASP-LIKE PROTEIN 5B3coord: 1..151

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh02G004150.1CmaCh02G004150.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane