Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCGAAAACTCAGGCGTTCACCGCCGCCGTTGCGGCGGCGTAACTACGCCACCGATTATGATGCTTCCCCATCTCAATCTCTCAACGCATCAAACGAAGACGACTACGACGCTTCTGAATCTAATAACTTCCAAACCAGCGGCCACAAATCAAAATCCCTAGAAATCAATGAAGAATCCGCCACGAATAGTCCAACGAATTTACAGAGTCCAAACGCCGCCGCAACAGTATTTCCATACATTAACATTGCACCGTTGCCTGTTTTTCACGGCGGCTCCGATGAGTGTCCGGCTACGCATTTAAGCAGATTCACCAAAGTTTGCCGTGCGAACAACGCGGCCTCCGTCGAGATTATGATGAGAATCTTTCCGGTAACGTTACAGGGCGAGGCTCTGCTTTGGTACGACTTGAACATTGAACCGTACCCTCCAATTTCTTGGGAAGAATTGAAGTCTTCGTTCTTGGACGCGTATAACAAAATCGAATTGGCTGAGCAGTTGCGATCGGAGCTTATGACGATCAGTCAACGGCCGGAGGAGAATGTTCGTTCGTATTTTCTGAGGCTGCAGTTGATCTTGAAGAAATGGCCGCCGGGAAACGAACTTTCCGATGGGTTTTTGAAAGCGATTTTCATGGATGGATTGAGGGAAGAGTTTAAGGAATGGATGATTCCACAGAAACCGGATTCTCTGAACGAGGCGTTGCGACTTGCATTTGGTTTCGAACAAGTTATGGTCATCCGTACTTCCGGCGGAAAGCGGTTTCTCCGGTGTGGGTTTTGTGAGGGGCGGCATGAGGAATTGGTTTGTGAGGTTAGGGAAAGAATGAGACGGTTGTGGAAGAGTAGGGAAAAGAAGAATGGCGGCGATATGGAGGAGAGCGACGGGCATAATACGGCGGCAACGGCGGCGGAGCTTGCGCGGTCGGTTTCGGCGATAAGCAGAAATGAAGCGGAGGTTGGGAAGGACGGCGGGGAAATGGCGGGTTTGAAGAAGAAAGGTCCGTGTCAGTGCTGGAAGCATCAGTGTGGGATGAAGAAATTGGATCGAAACCTTAGCATGCTATCAAAAACTTCTAAACCCTAA
mRNA sequence
ATGGCGCGAAAACTCAGGCGTTCACCGCCGCCGTTGCGGCGGCGTAACTACGCCACCGATTATGATGCTTCCCCATCTCAATCTCTCAACGCATCAAACGAAGACGACTACGACGCTTCTGAATCTAATAACTTCCAAACCAGCGGCCACAAATCAAAATCCCTAGAAATCAATGAAGAATCCGCCACGAATAGTCCAACGAATTTACAGAGTCCAAACGCCGCCGCAACAGTATTTCCATACATTAACATTGCACCGTTGCCTGTTTTTCACGGCGGCTCCGATGAGTGTCCGGCTACGCATTTAAGCAGATTCACCAAAGTTTGCCGTGCGAACAACGCGGCCTCCGTCGAGATTATGATGAGAATCTTTCCGGTAACGTTACAGGGCGAGGCTCTGCTTTGGTACGACTTGAACATTGAACCGTACCCTCCAATTTCTTGGGAAGAATTGAAGTCTTCGTTCTTGGACGCGTATAACAAAATCGAATTGGCTGAGCAGTTGCGATCGGAGCTTATGACGATCAGTCAACGGCCGGAGGAGAATGTTCGTTCGTATTTTCTGAGGCTGCAGTTGATCTTGAAGAAATGGCCGCCGGGAAACGAACTTTCCGATGGGTTTTTGAAAGCGATTTTCATGGATGGATTGAGGGAAGAGTTTAAGGAATGGATGATTCCACAGAAACCGGATTCTCTGAACGAGGCGTTGCGACTTGCATTTGGTTTCGAACAAGTTATGGTCATCCGTACTTCCGGCGGAAAGCGGTTTCTCCGGTGTGGGTTTTGTGAGGGGCGGCATGAGGAATTGGTTTGTGAGGTTAGGGAAAGAATGAGACGGTTGTGGAAGAGTAGGGAAAAGAAGAATGGCGGCGATATGGAGGAGAGCGACGGGCATAATACGGCGGCAACGGCGGCGGAGCTTGCGCGGTCGGTTTCGGCGATAAGCAGAAATGAAGCGGAGGTTGGGAAGGACGGCGGGGAAATGGCGGGTTTGAAGAAGAAAGGTCCGTGTCAGTGCTGGAAGCATCAGTGTGGGATGAAGAAATTGGATCGAAACCTTAGCATGCTATCAAAAACTTCTAAACCCTAA
Coding sequence (CDS)
ATGGCGCGAAAACTCAGGCGTTCACCGCCGCCGTTGCGGCGGCGTAACTACGCCACCGATTATGATGCTTCCCCATCTCAATCTCTCAACGCATCAAACGAAGACGACTACGACGCTTCTGAATCTAATAACTTCCAAACCAGCGGCCACAAATCAAAATCCCTAGAAATCAATGAAGAATCCGCCACGAATAGTCCAACGAATTTACAGAGTCCAAACGCCGCCGCAACAGTATTTCCATACATTAACATTGCACCGTTGCCTGTTTTTCACGGCGGCTCCGATGAGTGTCCGGCTACGCATTTAAGCAGATTCACCAAAGTTTGCCGTGCGAACAACGCGGCCTCCGTCGAGATTATGATGAGAATCTTTCCGGTAACGTTACAGGGCGAGGCTCTGCTTTGGTACGACTTGAACATTGAACCGTACCCTCCAATTTCTTGGGAAGAATTGAAGTCTTCGTTCTTGGACGCGTATAACAAAATCGAATTGGCTGAGCAGTTGCGATCGGAGCTTATGACGATCAGTCAACGGCCGGAGGAGAATGTTCGTTCGTATTTTCTGAGGCTGCAGTTGATCTTGAAGAAATGGCCGCCGGGAAACGAACTTTCCGATGGGTTTTTGAAAGCGATTTTCATGGATGGATTGAGGGAAGAGTTTAAGGAATGGATGATTCCACAGAAACCGGATTCTCTGAACGAGGCGTTGCGACTTGCATTTGGTTTCGAACAAGTTATGGTCATCCGTACTTCCGGCGGAAAGCGGTTTCTCCGGTGTGGGTTTTGTGAGGGGCGGCATGAGGAATTGGTTTGTGAGGTTAGGGAAAGAATGAGACGGTTGTGGAAGAGTAGGGAAAAGAAGAATGGCGGCGATATGGAGGAGAGCGACGGGCATAATACGGCGGCAACGGCGGCGGAGCTTGCGCGGTCGGTTTCGGCGATAAGCAGAAATGAAGCGGAGGTTGGGAAGGACGGCGGGGAAATGGCGGGTTTGAAGAAGAAAGGTCCGTGTCAGTGCTGGAAGCATCAGTGTGGGATGAAGAAATTGGATCGAAACCTTAGCATGCTATCAAAAACTTCTAAACCCTAA
Protein sequence
MARKLRRSPPPLRRRNYATDYDASPSQSLNASNEDDYDASESNNFQTSGHKSKSLEINEESATNSPTNLQSPNAAATVFPYINIAPLPVFHGGSDECPATHLSRFTKVCRANNAASVEIMMRIFPVTLQGEALLWYDLNIEPYPPISWEELKSSFLDAYNKIELAEQLRSELMTISQRPEENVRSYFLRLQLILKKWPPGNELSDGFLKAIFMDGLREEFKEWMIPQKPDSLNEALRLAFGFEQVMVIRTSGGKRFLRCGFCEGRHEELVCEVRERMRRLWKSREKKNGGDMEESDGHNTAATAAELARSVSAISRNEAEVGKDGGEMAGLKKKGPCQCWKHQCGMKKLDRNLSMLSKTSKP
Homology
BLAST of CmaCh02G000800 vs. ExPASy TrEMBL
Match:
A0A7N2R9A7 (Retrotrans_gag domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)
HSP 1 Score: 318.5 bits (815), Expect = 3.5e-83
Identity = 190/376 (50.53%), Postives = 245/376 (65.16%), Query Frame = 0
Query: 15 RNYATDYDASPSQSLNASNEDDYDASESNNFQTSGHKSKSLEINEESATNSP-------- 74
R YA D SL+ SNE+ Y+ + + + I+ ES TN+P
Sbjct: 30 REYAYKDDNYSDASLSESNENGYEYE-----RPAKDDNDDAYISSESETNAPGDRFSSQL 89
Query: 75 --TNLQSPNAAATVFP-------------------YINIAPLPVFHGGSDECPATHLSRF 134
+ QS N + T FP Y+NIAP+P+FHG ++ECP H+SRF
Sbjct: 90 RDPDSQSINLSTTAFPNSTSNFPKISQPPSTHLASYMNIAPIPIFHGNTNECPVKHVSRF 149
Query: 135 TKVCRANNAASVEIMMRIFPVTLQGEALLWYDLNIEPYPPISWEELKSSFLDAYNKIELA 194
KVC ANN ++ ++MMRIFPVTL+ EA LWYDLNIEPYP ++WEE+KSSFL AY+KIE+
Sbjct: 150 AKVCVANNVSTTDMMMRIFPVTLEDEAALWYDLNIEPYPSLTWEEIKSSFLHAYHKIEVV 209
Query: 195 EQLRSELMTISQRPEENVRSYFLRLQLILKKWPPGNELSDGFLKAIFMDGLREEFKEWMI 254
+QLRSELM I+Q EE+VRSYFLRLQ ILK+W P + +SDG LK +F+DGLREEF+ W+I
Sbjct: 210 DQLRSELMMINQGDEESVRSYFLRLQWILKQW-PDHGISDGLLKGVFIDGLREEFRGWII 269
Query: 255 PQKPDSLNEALRLAFGFEQVMVIRTSGGKRFLRCGFCEGRHEELVCEVRERMRRLWK-SR 314
PQKPDSL+EALRLAFGFEQV IR ++ L+CGFC+G HEE CEVRERMR+LW+ S+
Sbjct: 270 PQKPDSLHEALRLAFGFEQVKSIRAV--RKELKCGFCDGMHEERDCEVRERMRKLWRESK 329
Query: 315 EKKNGGDMEESDGHNTAATAAELARSVSAISRNEAEVGKDG-GEMAGLK--KKGPCQCWK 358
EK+ + +S G + EL RSVS + + VGK+ GE AG KK Q K
Sbjct: 330 EKEEAVVLAKSTGGDD-ELGKELVRSVSIGA--SSSVGKNNEGEEAGFMDGKKNQFQYGK 389
BLAST of CmaCh02G000800 vs. ExPASy TrEMBL
Match:
A5C7E6 (Retrotrans_gag domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_007470 PE=4 SV=1)
HSP 1 Score: 316.6 bits (810), Expect = 1.3e-82
Identity = 184/373 (49.33%), Postives = 238/373 (63.81%), Query Frame = 0
Query: 6 RRSPPPLRRRNYATDY-DASPSQSLNASNEDDYDASE--SNNFQTSGHKS---------- 65
R+ + + + DY + SPSQS +E++ D ++N SG +
Sbjct: 147 RKHHRKIXKEKFYDDYTEQSPSQSPYEFDEEEEDEQSXYTDNESASGTNAPGDQFSLPAL 206
Query: 66 ----KSLEINEESATNSPTNLQSPNAAATVFPYINIAPLPVFHGGSDECPATHLSRFTKV 125
K S+ NS +N +P ++ YINIAPLP+F G SDECP THLSRFTKV
Sbjct: 207 ESIPKGKSFRPSSSLNSSSNSLNPFXQSS---YINIAPLPIFRGSSDECPVTHLSRFTKV 266
Query: 126 CRANNAASVEIMMRIFPVTLQGEALLWYDLNIEPYPPISWEELKSSFLDAYNKIELAEQL 185
CRANN +SVE++MRIFPVTL GEA LWYDLNIEPY +SWEE+KSSFL AY++ L ++L
Sbjct: 267 CRANNVSSVEMIMRIFPVTLDGEAALWYDLNIEPYSSLSWEEIKSSFLQAYHRXGLTDEL 326
Query: 186 RSELMTISQRPEENVRSYFLRLQLILKKWPPGNELSDGFLKAIFMDGLREEFKEWMIPQK 245
RSELM I+Q EE+VRSYFLRLQ ILK+W P + L DG L+ IF+DGLR++F++W+IPQK
Sbjct: 327 RSELMMINQGTEESVRSYFLRLQWILKRW-PDHGLPDGLLEGIFIDGLRKDFQDWIIPQK 386
Query: 246 PDSLNEALRLAFGFEQVMVIRTSGGKRFLRCGFCEGRHEELVCEVRERMRRLWKSREKK- 305
P SLNEALRLAF +E+V IR G R CGFC G H+E CE+RERMR LW +K+
Sbjct: 387 PSSLNEALRLAFAWEKVQSIR---GGREKECGFCSGGHDEEGCEIRERMRXLWVKSKKQT 446
Query: 306 ---NGGDMEESDGHNTAATAAELARSVSAISRNEAEVGKDGGEMAGLKKKGPCQCWKHQC 358
+G + + DG + + +NE E G++G G KKK CQC KHQC
Sbjct: 447 RDYSGRIVNDEDGEKEFERRVSVGGESRBVGKNEEE-GEEG--XMGWKKKSQCQCGKHQC 506
BLAST of CmaCh02G000800 vs. ExPASy TrEMBL
Match:
B9RWN5 (Retrotrans_gag domain-containing protein OS=Ricinus communis OX=3988 GN=RCOM_1022950 PE=4 SV=1)
HSP 1 Score: 314.3 bits (804), Expect = 6.6e-82
Identity = 178/367 (48.50%), Postives = 237/367 (64.58%), Query Frame = 0
Query: 1 MARKLRRSPPPLR---RRNYATDYDASPSQSLNASNEDDYDASESNNFQTSGHKSKSLEI 60
M RK + S L+ R +Y+ SPSQS SN+DD + + + Q +S + +
Sbjct: 1 MTRKAKNSRKSLQFSSRHDYSE--STSPSQSPYDSNDDDDEIEDDDEEQPIISESVTNSL 60
Query: 61 NEESATNSPTNLQSPNAAATVFPYINIAPLPVFHGGSDECPATHLSRFTKVCRANNAASV 120
N + ++S + PN + YIN+APLPVFHG S+ECP HLSRF KVCRANNA+S
Sbjct: 61 NADQLSSSSYSNSQPNNS-----YINVAPLPVFHGNSNECPIAHLSRFVKVCRANNASST 120
Query: 121 EIMMRIFPVTLQGEALLWYDLNIEPYPPISWEELKSSFLDAYNKIELAEQLRSELMTISQ 180
++MMRIFPVTL+ EA LWYDLNI+PYP +SW+E+ SFL+AY +I+L +QLRS+LM ++Q
Sbjct: 121 DMMMRIFPVTLENEAALWYDLNIQPYPSLSWDEIMLSFLEAYQRIKLVDQLRSDLMMLNQ 180
Query: 181 RPEENVRSYFLRLQLILKKWPPGNELSDGFLKAIFMDGLREEFKEWMIPQKPDSLNEALR 240
+E+VRSYF+RLQ ILK+W P + LSD LK IF+DGL FK+W+IP KP+SLNEALR
Sbjct: 181 GSDESVRSYFMRLQWILKRW-PDHGLSDNMLKWIFIDGLMGNFKDWIIPHKPNSLNEALR 240
Query: 241 LAFGFEQVMVIRTSGGKRFLRCGFCEGRHEELVCEVRERMRRLWKSREKKNGGDMEESDG 300
LAF FEQV IR + ++ ++CGFCEG HEE C VRE+MR L+++ +KK E S+
Sbjct: 241 LAFSFEQVKSIRGT-KQKVVKCGFCEGSHEENCCVVREKMRELFRNSKKKMMIPKEASER 300
Query: 301 HNTAATAAELARSVSAISRNEAEVGKDGGEMAGLKK----KGPCQCWKHQCGMKKLDRNL 360
AE E +VG D E L K PCQC KH C MKK +R+
Sbjct: 301 SEAGNEMAENKDGKEGEEEEEVDVGDDKEEKRMLSSSKTGKSPCQCSKHHCWMKKFERSN 358
BLAST of CmaCh02G000800 vs. ExPASy TrEMBL
Match:
W9R9S0 (Retrotrans_gag domain-containing protein OS=Morus notabilis OX=981085 GN=L484_004813 PE=4 SV=1)
HSP 1 Score: 310.1 bits (793), Expect = 1.2e-80
Identity = 184/365 (50.41%), Postives = 228/365 (62.47%), Query Frame = 0
Query: 12 LRRRNYATDYDASPSQSLNASNEDDYDASESNNFQTSGHKSKSLEINEE----SATNSPT 71
+R N +T++D + + + D + N + S S IN SA++SP
Sbjct: 39 VRSPNDSTEFDQPENDDDDNDDASDAPTDSATNPLSDQFSSVSERINARKKSCSASHSPI 98
Query: 72 --NLQSPNAAATVFPYINIAPLPVFHGGSDECPATHLSRFTKVCRANNAASVEIMMRIFP 131
Q P + Y+NIA P+F GGS+ECP HLSRF KVCRANN +S+++MM+IFP
Sbjct: 99 LHLPQQPVSQTGYNSYMNIAQFPIFRGGSEECPFAHLSRFAKVCRANNVSSIDMMMKIFP 158
Query: 132 VTLQGEALLWYDLNIEPYPPISWEELKSSFLDAYNKIELAEQLRSELMTISQRPEENVRS 191
VTL+ EA LWYDLN+EPY +SWEE+KSSF AY KIEL EQLRS+LMTI+Q E+VRS
Sbjct: 159 VTLEDEAALWYDLNVEPYEELSWEEIKSSFYHAYGKIELTEQLRSQLMTINQGDAESVRS 218
Query: 192 YFLRLQLILKKWPPGNELSDGFLKAIFMDGLREEFKEWMIPQKPDSLNEALRLAFGFEQV 251
YFLRLQ ILKKWP + LSD LK +F+DGLR +F+EWM PQKP SLN+ALRLAF FEQV
Sbjct: 219 YFLRLQWILKKWPE-HGLSDDLLKGVFVDGLRGDFQEWMAPQKPGSLNKALRLAFCFEQV 278
Query: 252 MVIRTSGGKRFLRCGFCEGRHEELVCEVRERMRRLWKSREKKN--GGDMEESDGHNTAAT 311
IR ++CGFC G HEE CEVRERMR LW K + G M E + +
Sbjct: 279 KSIRNVRRNASVKCGFCGGLHEERGCEVRERMRELWLKSNKDDGLGKGMLERNLIEKSEG 338
Query: 312 AAELARSVS-AISRNEAEVGK------DG----GEMAGLKKKGPCQCWKHQCGMKKLDRN 358
EL RSVS A SR+ VGK DG E+ KK+ CQC KHQC K ++RN
Sbjct: 339 VKELGRSVSMATSRSTCVVGKNDQVEEDGKEEEDELGSKKKRSQCQCGKHQCWKKNIERN 398
BLAST of CmaCh02G000800 vs. ExPASy TrEMBL
Match:
A0A061DJI4 (Retrotrans_gag domain-containing protein OS=Theobroma cacao OX=3641 GN=TCM_001704 PE=4 SV=1)
HSP 1 Score: 309.7 bits (792), Expect = 1.6e-80
Identity = 174/344 (50.58%), Postives = 229/344 (66.57%), Query Frame = 0
Query: 27 QSLNASNEDDYDAS--ESNNFQTSGHKSKSL----EINEESATNSPTN--LQSPNAAATV 86
Q N ++ DD+DAS +S + + + K+L ++ ++ NS +N + S +
Sbjct: 62 QPRNENDYDDFDASDFQSESMTNAPNAPKTLLRGNGLSAAASLNSVSNSAIWSRSNLIEA 121
Query: 87 FPYINIAPLPVFHGGSDECPATHLSRFTKVCRANNAASVEIMMRIFPVTLQGEALLWYDL 146
YINIAPLP+F G +CP THLSRF KVCRANN +SV++MMRIFPVTL+ EA LWYDL
Sbjct: 122 TSYINIAPLPIFQGSPSDCPVTHLSRFAKVCRANNVSSVDMMMRIFPVTLENEAGLWYDL 181
Query: 147 NIEPYPPISWEELKSSFLDAYNKIELAEQLRSELMTISQRPEENVRSYFLRLQLILKKWP 206
NIEPYP + WEE+KSSFL AY+K ++ EQLR ELM I+Q EE VRSYFLRLQ L++W
Sbjct: 182 NIEPYPSLRWEEIKSSFLQAYHKTQVTEQLRHELMMINQGSEERVRSYFLRLQWSLQRW- 241
Query: 207 PGNELSDGFLKAIFMDGLREEFKEWMIPQKPDSLNEALRLAFGFEQVMVIRTSGGKRFLR 266
P + + + LK IF+DGLRE+F++W++PQKPDSL EALRLA FEQ+ I+ S K+ L+
Sbjct: 242 PDHGIPENLLKEIFVDGLREDFQDWIVPQKPDSLVEALRLAIAFEQLKSIKIS-RKKDLK 301
Query: 267 CGFCEGRHEELVCEVRERMRRLWKSREKKNGGDMEESDGHNTAATAAELARSVSAISRNE 326
C FCEG HEE C+VRERM+ LW+ + K D E + N A + SA R E
Sbjct: 302 CDFCEGSHEERNCQVRERMKELWRKTKDKEWMDSSEKNQSNEAVNE---SAEGSAEDRIE 361
Query: 327 AEVGKDGGEMAG--LKKKGPCQCWKHQCGMKKLDRNLSMLSKTS 361
E +G ++G KKK PCQC KHQC K+LDR S++S+ S
Sbjct: 362 EENVVEGEMLSGRKQKKKSPCQCCKHQCWKKQLDRTNSLVSRNS 400
BLAST of CmaCh02G000800 vs. NCBI nr
Match:
KAG6604769.1 (hypothetical protein SDJN03_02086, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 686.8 bits (1771), Expect = 1.0e-193
Identity = 347/362 (95.86%), Postives = 349/362 (96.41%), Query Frame = 0
Query: 1 MARKLRRSPPPLRRRNYATDYDASPSQSLNASNEDDYDASESNNFQTSGHKSKSLEINEE 60
MA KLRRSPPPLRRRNYATDYDAS SQSL+ASNEDDYDASESNNFQTSGHKSKSLEINEE
Sbjct: 1 MAPKLRRSPPPLRRRNYATDYDASLSQSLDASNEDDYDASESNNFQTSGHKSKSLEINEE 60
Query: 61 SATNSPTNLQSPNAAATVFPYINIAPLPVFHGGSDECPATHLSRFTKVCRANNAASVEIM 120
SATNSPTNLQSPNAAATVFPYINIAPLPVFHGGSDECPATHLSRF KVCRANNAASVEIM
Sbjct: 61 SATNSPTNLQSPNAAATVFPYINIAPLPVFHGGSDECPATHLSRFAKVCRANNAASVEIM 120
Query: 121 MRIFPVTLQGEALLWYDLNIEPYPPISWEELKSSFLDAYNKIELAEQLRSELMTISQRPE 180
MRIFPVTLQGEALLWYDLNIEPYPPISWEELKSSFLDAYNKIELAEQLRSELMTISQRPE
Sbjct: 121 MRIFPVTLQGEALLWYDLNIEPYPPISWEELKSSFLDAYNKIELAEQLRSELMTISQRPE 180
Query: 181 ENVRSYFLRLQLILKKWPPGNELSDGFLKAIFMDGLREEFKEWMIPQKPDSLNEALRLAF 240
ENVRSYFLRLQLILKKWPPGNELSDGFLKAIFMDGLREEFKEWMIPQKPDSLNEALRLAF
Sbjct: 181 ENVRSYFLRLQLILKKWPPGNELSDGFLKAIFMDGLREEFKEWMIPQKPDSLNEALRLAF 240
Query: 241 GFEQVMVIRTSGGKRFLRCGFCEGRHEELVCEVRERMRRLWKSREKKNGGDMEESDGHNT 300
G EQV VIRTSGGKRFLRCGFCEGRHEELVCEVRERMRRLWKSREKKNGGDM ES+GHNT
Sbjct: 241 GLEQVTVIRTSGGKRFLRCGFCEGRHEELVCEVRERMRRLWKSREKKNGGDMAESEGHNT 300
Query: 301 AATAAELARSVSAISRNEAEVGKDGGEMAGLKKKGPCQCWKHQCGMKKLDRNLSMLSKTS 360
AEL RSVSAISRNEAEVGKDGGEM GLKKKG CQCWKHQCGMKKLDRNLSMLSKTS
Sbjct: 301 ----AELVRSVSAISRNEAEVGKDGGEMVGLKKKGQCQCWKHQCGMKKLDRNLSMLSKTS 358
Query: 361 KP 363
KP
Sbjct: 361 KP 358
BLAST of CmaCh02G000800 vs. NCBI nr
Match:
CAN62167.1 (hypothetical protein VITISV_007470 [Vitis vinifera])
HSP 1 Score: 317.8 bits (813), Expect = 1.2e-82
Identity = 184/373 (49.33%), Postives = 239/373 (64.08%), Query Frame = 0
Query: 6 RRSPPPLRRRNYATDY-DASPSQSLNASNEDDYDASE--SNNFQTSGHKS---------- 65
R+ + + + DY + SPSQS +E++ D ++N SG +
Sbjct: 147 RKHHRKIJKEKFYDDYTEQSPSQSPYEFDEEEEDEQSXYTDNESASGTNAPGDQFSLPAL 206
Query: 66 ----KSLEINEESATNSPTNLQSPNAAATVFPYINIAPLPVFHGGSDECPATHLSRFTKV 125
K S+ NS +N +P ++ YINIAPLP+F G SDECP THLSRFTKV
Sbjct: 207 ESIPKGKSFRPSSSLNSSSNSLNPFXQSS---YINIAPLPIFRGSSDECPVTHLSRFTKV 266
Query: 126 CRANNAASVEIMMRIFPVTLQGEALLWYDLNIEPYPPISWEELKSSFLDAYNKIELAEQL 185
CRANN +SVE++MRIFPVTL GEA LWYDLNIEPY +SWEE+KSSFL AY+++ L ++L
Sbjct: 267 CRANNVSSVEMIMRIFPVTLDGEAALWYDLNIEPYSSLSWEEIKSSFLQAYHRJGLTDEL 326
Query: 186 RSELMTISQRPEENVRSYFLRLQLILKKWPPGNELSDGFLKAIFMDGLREEFKEWMIPQK 245
RSELM I+Q EE+VRSYFLRLQ ILK+W P + L DG L+ IF+DGLR++F++W+IPQK
Sbjct: 327 RSELMMINQGTEESVRSYFLRLQWILKRW-PDHGLPDGLLEGIFIDGLRKDFQDWIIPQK 386
Query: 246 PDSLNEALRLAFGFEQVMVIRTSGGKRFLRCGFCEGRHEELVCEVRERMRRLWKSREKK- 305
P SLNEALRLAF +E+V IR G R CGFC G H+E CE+RERMR LW +K+
Sbjct: 387 PSSLNEALRLAFAWEKVQSIR---GGREKECGFCSGGHDEEGCEIRERMRXLWVKSKKQT 446
Query: 306 ---NGGDMEESDGHNTAATAAELARSVSAISRNEAEVGKDGGEMAGLKKKGPCQCWKHQC 358
+G + + DG + + +NE E G++G G KKK CQC KHQC
Sbjct: 447 RDYSGRIVNDEDGEKEFERRVSVGGESRBVGKNEEE-GEEG--XMGWKKKSQCQCGKHQC 506
BLAST of CmaCh02G000800 vs. NCBI nr
Match:
EEF44287.1 (conserved hypothetical protein [Ricinus communis])
HSP 1 Score: 314.3 bits (804), Expect = 1.4e-81
Identity = 178/367 (48.50%), Postives = 237/367 (64.58%), Query Frame = 0
Query: 1 MARKLRRSPPPLR---RRNYATDYDASPSQSLNASNEDDYDASESNNFQTSGHKSKSLEI 60
M RK + S L+ R +Y+ SPSQS SN+DD + + + Q +S + +
Sbjct: 1 MTRKAKNSRKSLQFSSRHDYSE--STSPSQSPYDSNDDDDEIEDDDEEQPIISESVTNSL 60
Query: 61 NEESATNSPTNLQSPNAAATVFPYINIAPLPVFHGGSDECPATHLSRFTKVCRANNAASV 120
N + ++S + PN + YIN+APLPVFHG S+ECP HLSRF KVCRANNA+S
Sbjct: 61 NADQLSSSSYSNSQPNNS-----YINVAPLPVFHGNSNECPIAHLSRFVKVCRANNASST 120
Query: 121 EIMMRIFPVTLQGEALLWYDLNIEPYPPISWEELKSSFLDAYNKIELAEQLRSELMTISQ 180
++MMRIFPVTL+ EA LWYDLNI+PYP +SW+E+ SFL+AY +I+L +QLRS+LM ++Q
Sbjct: 121 DMMMRIFPVTLENEAALWYDLNIQPYPSLSWDEIMLSFLEAYQRIKLVDQLRSDLMMLNQ 180
Query: 181 RPEENVRSYFLRLQLILKKWPPGNELSDGFLKAIFMDGLREEFKEWMIPQKPDSLNEALR 240
+E+VRSYF+RLQ ILK+W P + LSD LK IF+DGL FK+W+IP KP+SLNEALR
Sbjct: 181 GSDESVRSYFMRLQWILKRW-PDHGLSDNMLKWIFIDGLMGNFKDWIIPHKPNSLNEALR 240
Query: 241 LAFGFEQVMVIRTSGGKRFLRCGFCEGRHEELVCEVRERMRRLWKSREKKNGGDMEESDG 300
LAF FEQV IR + ++ ++CGFCEG HEE C VRE+MR L+++ +KK E S+
Sbjct: 241 LAFSFEQVKSIRGT-KQKVVKCGFCEGSHEENCCVVREKMRELFRNSKKKMMIPKEASER 300
Query: 301 HNTAATAAELARSVSAISRNEAEVGKDGGEMAGLKK----KGPCQCWKHQCGMKKLDRNL 360
AE E +VG D E L K PCQC KH C MKK +R+
Sbjct: 301 SEAGNEMAENKDGKEGEEEEEVDVGDDKEEKRMLSSSKTGKSPCQCSKHHCWMKKFERSN 358
BLAST of CmaCh02G000800 vs. NCBI nr
Match:
EXB78111.1 (hypothetical protein L484_004813 [Morus notabilis])
HSP 1 Score: 310.1 bits (793), Expect = 2.6e-80
Identity = 184/365 (50.41%), Postives = 228/365 (62.47%), Query Frame = 0
Query: 12 LRRRNYATDYDASPSQSLNASNEDDYDASESNNFQTSGHKSKSLEINEE----SATNSPT 71
+R N +T++D + + + D + N + S S IN SA++SP
Sbjct: 39 VRSPNDSTEFDQPENDDDDNDDASDAPTDSATNPLSDQFSSVSERINARKKSCSASHSPI 98
Query: 72 --NLQSPNAAATVFPYINIAPLPVFHGGSDECPATHLSRFTKVCRANNAASVEIMMRIFP 131
Q P + Y+NIA P+F GGS+ECP HLSRF KVCRANN +S+++MM+IFP
Sbjct: 99 LHLPQQPVSQTGYNSYMNIAQFPIFRGGSEECPFAHLSRFAKVCRANNVSSIDMMMKIFP 158
Query: 132 VTLQGEALLWYDLNIEPYPPISWEELKSSFLDAYNKIELAEQLRSELMTISQRPEENVRS 191
VTL+ EA LWYDLN+EPY +SWEE+KSSF AY KIEL EQLRS+LMTI+Q E+VRS
Sbjct: 159 VTLEDEAALWYDLNVEPYEELSWEEIKSSFYHAYGKIELTEQLRSQLMTINQGDAESVRS 218
Query: 192 YFLRLQLILKKWPPGNELSDGFLKAIFMDGLREEFKEWMIPQKPDSLNEALRLAFGFEQV 251
YFLRLQ ILKKWP + LSD LK +F+DGLR +F+EWM PQKP SLN+ALRLAF FEQV
Sbjct: 219 YFLRLQWILKKWPE-HGLSDDLLKGVFVDGLRGDFQEWMAPQKPGSLNKALRLAFCFEQV 278
Query: 252 MVIRTSGGKRFLRCGFCEGRHEELVCEVRERMRRLWKSREKKN--GGDMEESDGHNTAAT 311
IR ++CGFC G HEE CEVRERMR LW K + G M E + +
Sbjct: 279 KSIRNVRRNASVKCGFCGGLHEERGCEVRERMRELWLKSNKDDGLGKGMLERNLIEKSEG 338
Query: 312 AAELARSVS-AISRNEAEVGK------DG----GEMAGLKKKGPCQCWKHQCGMKKLDRN 358
EL RSVS A SR+ VGK DG E+ KK+ CQC KHQC K ++RN
Sbjct: 339 VKELGRSVSMATSRSTCVVGKNDQVEEDGKEEEDELGSKKKRSQCQCGKHQCWKKNIERN 398
BLAST of CmaCh02G000800 vs. NCBI nr
Match:
EOX92844.1 (Uncharacterized protein TCM_001704 [Theobroma cacao])
HSP 1 Score: 309.7 bits (792), Expect = 3.4e-80
Identity = 174/344 (50.58%), Postives = 229/344 (66.57%), Query Frame = 0
Query: 27 QSLNASNEDDYDAS--ESNNFQTSGHKSKSL----EINEESATNSPTN--LQSPNAAATV 86
Q N ++ DD+DAS +S + + + K+L ++ ++ NS +N + S +
Sbjct: 62 QPRNENDYDDFDASDFQSESMTNAPNAPKTLLRGNGLSAAASLNSVSNSAIWSRSNLIEA 121
Query: 87 FPYINIAPLPVFHGGSDECPATHLSRFTKVCRANNAASVEIMMRIFPVTLQGEALLWYDL 146
YINIAPLP+F G +CP THLSRF KVCRANN +SV++MMRIFPVTL+ EA LWYDL
Sbjct: 122 TSYINIAPLPIFQGSPSDCPVTHLSRFAKVCRANNVSSVDMMMRIFPVTLENEAGLWYDL 181
Query: 147 NIEPYPPISWEELKSSFLDAYNKIELAEQLRSELMTISQRPEENVRSYFLRLQLILKKWP 206
NIEPYP + WEE+KSSFL AY+K ++ EQLR ELM I+Q EE VRSYFLRLQ L++W
Sbjct: 182 NIEPYPSLRWEEIKSSFLQAYHKTQVTEQLRHELMMINQGSEERVRSYFLRLQWSLQRW- 241
Query: 207 PGNELSDGFLKAIFMDGLREEFKEWMIPQKPDSLNEALRLAFGFEQVMVIRTSGGKRFLR 266
P + + + LK IF+DGLRE+F++W++PQKPDSL EALRLA FEQ+ I+ S K+ L+
Sbjct: 242 PDHGIPENLLKEIFVDGLREDFQDWIVPQKPDSLVEALRLAIAFEQLKSIKIS-RKKDLK 301
Query: 267 CGFCEGRHEELVCEVRERMRRLWKSREKKNGGDMEESDGHNTAATAAELARSVSAISRNE 326
C FCEG HEE C+VRERM+ LW+ + K D E + N A + SA R E
Sbjct: 302 CDFCEGSHEERNCQVRERMKELWRKTKDKEWMDSSEKNQSNEAVNE---SAEGSAEDRIE 361
Query: 327 AEVGKDGGEMAG--LKKKGPCQCWKHQCGMKKLDRNLSMLSKTS 361
E +G ++G KKK PCQC KHQC K+LDR S++S+ S
Sbjct: 362 EENVVEGEMLSGRKQKKKSPCQCCKHQCWKKQLDRTNSLVSRNS 400
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A7N2R9A7 | 3.5e-83 | 50.53 | Retrotrans_gag domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1 | [more] |
A5C7E6 | 1.3e-82 | 49.33 | Retrotrans_gag domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_00... | [more] |
B9RWN5 | 6.6e-82 | 48.50 | Retrotrans_gag domain-containing protein OS=Ricinus communis OX=3988 GN=RCOM_102... | [more] |
W9R9S0 | 1.2e-80 | 50.41 | Retrotrans_gag domain-containing protein OS=Morus notabilis OX=981085 GN=L484_00... | [more] |
A0A061DJI4 | 1.6e-80 | 50.58 | Retrotrans_gag domain-containing protein OS=Theobroma cacao OX=3641 GN=TCM_00170... | [more] |
Match Name | E-value | Identity | Description | |
KAG6604769.1 | 1.0e-193 | 95.86 | hypothetical protein SDJN03_02086, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
CAN62167.1 | 1.2e-82 | 49.33 | hypothetical protein VITISV_007470 [Vitis vinifera] | [more] |
EEF44287.1 | 1.4e-81 | 48.50 | conserved hypothetical protein [Ricinus communis] | [more] |
EXB78111.1 | 2.6e-80 | 50.41 | hypothetical protein L484_004813 [Morus notabilis] | [more] |
EOX92844.1 | 3.4e-80 | 50.58 | Uncharacterized protein TCM_001704 [Theobroma cacao] | [more] |
Match Name | E-value | Identity | Description | |