CmaCh02G000330 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh02G000330
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr02: 177700 .. 178325 (-)
RNA-Seq ExpressionCmaCh02G000330
SyntenyCmaCh02G000330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAGTAGCAACGATGCCACCTTTGAGTTTCATTTACCAGGTGATAAATGCAGGACCAAATTTATTTTCTATGATAATATCGTTACTCCACTTTGTATGTGCTCAAATACATAATTTCTGTAATAGTCATATCAGCATGGTGTAAACATTTTTGTGGATGATGAGTATGAATTATTGATTTTGATAGGATTTACGGTACGATGGTTGACCCATGAATGATAGTTTCAGGCGTCTGCTAAATGCAAATAATAATAATGCCAATGGGCCACTGCCTTTAATTATTTCCTTTCCCTTATTGTAGTGAGTACTGATGGCATTGCATCTGCGAGAATCTGTGCTATGAAAACAACTGCTCTTCTCTCTCTTCCAGAACTCATCAAAGCCTTTCCTTTCCTAATCAGATTATATCAAGTATGTTGGAAGTTAGTGATATTTGCTTTCAGATTCAATTATTTATACTTGTTATGCGTTGCGTAGTTTAGGCACCCAATTATGTTGATGCTAAGGTCTAGGATGCGATTGAATAACTACTACTTTTCTATTTTTGAGTACAAAGCATATCCTAAGATGATTATTGTAATGTTATGCCTCTTGCGAACCTCTAGTAATCAAAGTGAAGCATGA

mRNA sequence

ATGGTAGTAGCAACGATGCCACCTTTGAGTTTCATTTACCAGGATTTACGGTACGATGTGAGTACTGATGGCATTGCATCTGCGAGAATCTGTGCTATGAAAACAACTGCTCTTCTCTCTCTTCCAGAACTCATCAAAGCCTTTCCTTTCCTAATCAGATTATATCAATTTAGGCACCCAATTATGTTGATGCTAAGGTCTAGGATGCGATTGAATAACTACTACTTTTCTATTTTTGAGTACAAAGCATATCCTAAGATGATTATTGTAATGTTATGCCTCTTGCGAACCTCTAGTAATCAAAGTGAAGCATGA

Coding sequence (CDS)

ATGGTAGTAGCAACGATGCCACCTTTGAGTTTCATTTACCAGGATTTACGGTACGATGTGAGTACTGATGGCATTGCATCTGCGAGAATCTGTGCTATGAAAACAACTGCTCTTCTCTCTCTTCCAGAACTCATCAAAGCCTTTCCTTTCCTAATCAGATTATATCAATTTAGGCACCCAATTATGTTGATGCTAAGGTCTAGGATGCGATTGAATAACTACTACTTTTCTATTTTTGAGTACAAAGCATATCCTAAGATGATTATTGTAATGTTATGCCTCTTGCGAACCTCTAGTAATCAAAGTGAAGCATGA

Protein sequence

MVVATMPPLSFIYQDLRYDVSTDGIASARICAMKTTALLSLPELIKAFPFLIRLYQFRHPIMLMLRSRMRLNNYYFSIFEYKAYPKMIIVMLCLLRTSSNQSEA
Homology
[Close]
BLAST of CmaCh02G000330 vs. NCBI nr
Match: KAG7034855.1 (hypothetical protein SDJN02_01648 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 72.0 bits (175), Expect = 3.4e-09
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0 

Query: 20 VSTDGIASARICAMKTTALLSLPELIKAFPFLIRLYQ 57
          VSTDGIASARICAMKTTALLSLPELIKAFPFLIRLYQ
Sbjct: 15 VSTDGIASARICAMKTTALLSLPELIKAFPFLIRLYQ 51

[Close]
BLAST of CmaCh02G000330 vs. NCBI nr
Match: KAG6604726.1 (Conserved oligomeric Golgi complex subunit 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 72.0 bits (175), Expect = 3.4e-09
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0 

Query: 20  VSTDGIASARICAMKTTALLSLPELIKAFPFLIRLYQ 57
           VSTDGIASARICAMKTTALLSLPELIKAFPFLIRLYQ
Sbjct: 845 VSTDGIASARICAMKTTALLSLPELIKAFPFLIRLYQ 881

The following BLAST results are available for this feature:
BLAST of CmaCh02G000330 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh02G000330 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh02G000330 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7034855.13.4e-09100.00hypothetical protein SDJN02_01648 [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6604726.13.4e-09100.00Conserved oligomeric Golgi complex subunit 5, partial [Cucurbita argyrosperma su... [more]
BLAST of CmaCh02G000330 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh02G000330.1CmaCh02G000330.1mRNA