![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
CmaCh01G020230 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATTAAAAAAAAAAAAAAAAAATCCCTTTAATTACGTTTCCACACTAAGAGGTTCGGTTTTGCAGTCGGTGGTTTCTGCAGAAAAAAAGACCGAACTTTTTTTTCTTTATAAAACCGAACCTTGCATGGAACATTGGAGAAGTCAGTTTGACGTTGGCCCAATAATGAAGTCGTTCATAACACCAACAGAATTGAGTGCAGTGGTATTGGTGCGTGGAACCCACGCGCTGTAGCAGCTAGTAGTGGAGGGTTTGTGGTAAAGGGACATTGCCGTCGTGGCAAAGCAAAGAAAAGATACAGACAAGCCAAGATAATCAGAAGACCCGCCGCGACCTCCGCAATTAGCGATAGAGTGCGGGTCCGACGTGGCATGTTCAGCAACAGCACAGTAGGCTGACCGCGCTTTCCACGCCTTTTTCTGTCTTTTTTTTAGGCTCCTACTACTATCCAAGTCTCTTGTGCGTTGCTTCCAATTGAGTGGTTTTTGTTTCCCCCTTTTTGCTTTGCTTAACAGGAGAAATGGAAATGCCCAAATGGGTTTGCTGAGAATGGAGACGTAGAAGAACCAACAAAAGAGGAAGAAGAAGCAAAAGAGGAGGAGGAGGAGGATGGAGTGGCCGAACCAGCAGCAGCAGAACAACCAAACTGAGCAATTGCAAATTCAAGTAGAGCAATTGAGCAACGGCGATGGAGTTGGCGGGCTGTACGTCAAGGTAATGACGGATGAGCAAATGGAGCTCCTCAGGCACCAGATCTCTGTCTATGCTACCATATGTGAGCAGCTCGTGGAGATGCACAAGGCTATCACCGCCCACCAGGACCTTGCCGGTCTTTCTCTTTCTTCATCTCATTATCAAGTTTATGTGAGCAGCTCTAATGTTGTCTGGTTTTTCAGGAATTAGGGTAGGGAACCTTTACTGCGATCAAATAATGGCATCTGCGGCTGGTCACAAGATAAGCGCTAGGCAGAGGTGGACGCCCACGCCTGTGCAGCTTCAAATTCTTGAGCAGATCTTTGATGAGGGCAATGGGACCCCAAGCAAGCAGAAGATCAAGGAAATAACTCTCCACCTCACACAGCATGGCCAAATTTCAGAAGCAAATGTTTACAATTGGTTTCAGAACAGAAGGGCTCGCTCAAAAAGAAAGCAGGCAAATTCAACACCAAATAATCCAGACTCAGAACCAGACACAGAAGTTGATTCTCCAAAGGACAAAAAGACCAAACCAGAAACCTTCCAAACATATGACCAATTCGTTTCGAATTCCAACAACGTGTATTCTCAGACATCTGATTTAGGCGCTGAAATGCTCGCCTTTGATGCACAATCAAACAAAGGGGACCCCATGTTTCAGTCTTTCGGATCGAGTCATTTAAGTCAGGTGGCCACAGCACAGAATCACAGTACGTTCCTAATCTTCTAAGCACTATACGTTTGAGAGCATGCTGAATCAAACATATTTGAAGATAATGCATATTTGAGTATAACTTGTTAGTTTGTACATTGAACTTGCGAATGTGCAGGAAATAATGATAAGATGAACGTACCAGACGGCTACACCCCTTACCATCCTTGTGAAGGATATCCACTTGGTTGAGTGATTGATGCCTAACATTCCACAGATGTTCTTGAAAACAATGGTCTGATCATCCTGGAGGAATGTTAACTGAGACAGTAAATATTAGAGAGCATGTAAAAGGAAATCAAGTTTTGAAGATGCTTGTTGGGGCATTTTACATACGTGGTTACCATTGATATAGCTTACAATATAATAGAAATCGAACTCCTTGTATTTGACTTGTACAACCAACTCATACAGTTCTGTAGTTTGGTCTGAGATCCTCTTCCGCTGATATCAGCCATTGTCAAACTGATATCCTCTTCCGCTGATATCAGCTATTGTCAAACTGATATCCTCTTCCACTGATATCAGCTACTGTCAAACTGATATCAACTAATAGAGAGGTAAAATCCACGCTACCCGCACAAGATTAAAACATGCTAAACTAATTAATTGCCTGCATTTGCTAGCAATCTCCTAAAGTTACCATAATTCCAACCCAGCTACAAAAACATCTCCGATACGACTAACCTTGTGCCCGCATCCTTGATCCGACTGTTTTTCTACTTTGATGCAGCATCTAGGTGCCCACTTTCTTAAGATTCTCAAGGCACTTTTTAGGAATTTTCTTAAGAAGCATGTGAGTGAGGATAAAACGTGCATAAATGACTTTGGTTGGTTTGTGAGGATAGTCTTCATTCTTAGAAGCACGTTAAGACAACTATGTAACATAGAATGTCGGGATCATCTGGATTCTGAATCCTAAACATAAAG AAATTAAAAAAAAAAAAAAAAAATCCCTTTAATTACGTTTCCACACTAAGAGGTTCGGTTTTGCAGTCGGTGGTTTCTGCAGAAAAAAAGACCGAACTTTTTTTTCTTTATAAAACCGAACCTTGCATGGAACATTGGAGAAGTCAGTTTGACGTTGGCCCAATAATGAAGTCGTTCATAACACCAACAGAATTGAGTGCAGTGGTATTGGTGCGTGGAACCCACGCGCTGTAGCAGCTAGTAGTGGAGGGTTTGTGGTAAAGGGACATTGCCGTCGTGGCAAAGCAAAGAAAAGATACAGACAAGCCAAGATAATCAGAAGACCCGCCGCGACCTCCGCAATTAGCGATAGAGTGCGGGTCCGACGTGGCATGTTCAGCAACAGCACAAAGAACCAACAAAAGAGGAAGAAGAAGCAAAAGAGGAGGAGGAGGAGGATGGAGTGGCCGAACCAGCAGCAGCAGAACAACCAAACTGAGCAATTGCAAATTCAAGTAGAGCAATTGAGCAACGGCGATGGAGTTGGCGGGCTGTACGTCAAGGTAATGACGGATGAGCAAATGGAGCTCCTCAGGCACCAGATCTCTGTCTATGCTACCATATGTGAGCAGCTCGTGGAGATGCACAAGGCTATCACCGCCCACCAGGACCTTGCCGGAATTAGGGTAGGGAACCTTTACTGCGATCAAATAATGGCATCTGCGGCTGGTCACAAGATAAGCGCTAGGCAGAGGTGGACGCCCACGCCTGTGCAGCTTCAAATTCTTGAGCAGATCTTTGATGAGGGCAATGGGACCCCAAGCAAGCAGAAGATCAAGGAAATAACTCTCCACCTCACACAGCATGGCCAAATTTCAGAAGCAAATGTTTACAATTGGTTTCAGAACAGAAGGGCTCGCTCAAAAAGAAAGCAGGCAAATTCAACACCAAATAATCCAGACTCAGAACCAGACACAGAAGTTGATTCTCCAAAGGACAAAAAGACCAAACCAGAAACCTTCCAAACATATGACCAATTCGTTTCGAATTCCAACAACGTGTATTCTCAGACATCTGATTTAGGCGCTGAAATGCTCGCCTTTGATGCACAATCAAACAAAGGGGACCCCATGTTTCAGTCTTTCGGATCGAGTCATTTAAGTCAGGTGGCCACAGCACAGAATCACAGAAATAATGATAAGATGAACGTACCAGACGGCTACACCCCTTACCATCCTTGTGAAGGATATCCACTTGGTTGAGTGATTGATGCCTAACATTCCACAGATGTTCTTGAAAACAATGGTCTGATCATCCTGGAGGAATGTTAACTGAGACAGTAAATATTAGAGAGCATGTAAAAGGAAATCAAGTTTTGAAGATGCTTGTTGGGGCATTTTACATACGTGGTTACCATTGATATAGCTTACAATATAATAGAAATCGAACTCCTTGTATTTGACTTGTACAACCAACTCATACAGTTCTGTAGTTTGGTCTGAGATCCTCTTCCGCTGATATCAGCCATTGTCAAACTGATATCCTCTTCCGCTGATATCAGCTATTGTCAAACTGATATCCTCTTCCACTGATATCAGCTACTGTCAAACTGATATCAACTAATAGAGAGGTAAAATCCACGCTACCCGCACAAGATTAAAACATGCTAAACTAATTAATTGCCTGCATTTGCTAGCAATCTCCTAAAGTTACCATAATTCCAACCCAGCTACAAAAACATCTCCGATACGACTAACCTTGTGCCCGCATCCTTGATCCGACTGTTTTTCTACTTTGATGCAGCATCTAGGTGCCCACTTTCTTAAGATTCTCAAGGCACTTTTTAGGAATTTTCTTAAGAAGCATGTGAGTGAGGATAAAACGTGCATAAATGACTTTGGTTGGTTTGTGAGGATAGTCTTCATTCTTAGAAGCACGTTAAGACAACTATGTAACATAGAATGTCGGGATCATCTGGATTCTGAATCCTAAACATAAAG ATGTTCAGCAACAGCACAAAGAACCAACAAAAGAGGAAGAAGAAGCAAAAGAGGAGGAGGAGGAGGATGGAGTGGCCGAACCAGCAGCAGCAGAACAACCAAACTGAGCAATTGCAAATTCAAGTAGAGCAATTGAGCAACGGCGATGGAGTTGGCGGGCTGTACGTCAAGGTAATGACGGATGAGCAAATGGAGCTCCTCAGGCACCAGATCTCTGTCTATGCTACCATATGTGAGCAGCTCGTGGAGATGCACAAGGCTATCACCGCCCACCAGGACCTTGCCGGAATTAGGGTAGGGAACCTTTACTGCGATCAAATAATGGCATCTGCGGCTGGTCACAAGATAAGCGCTAGGCAGAGGTGGACGCCCACGCCTGTGCAGCTTCAAATTCTTGAGCAGATCTTTGATGAGGGCAATGGGACCCCAAGCAAGCAGAAGATCAAGGAAATAACTCTCCACCTCACACAGCATGGCCAAATTTCAGAAGCAAATGTTTACAATTGGTTTCAGAACAGAAGGGCTCGCTCAAAAAGAAAGCAGGCAAATTCAACACCAAATAATCCAGACTCAGAACCAGACACAGAAGTTGATTCTCCAAAGGACAAAAAGACCAAACCAGAAACCTTCCAAACATATGACCAATTCGTTTCGAATTCCAACAACGTGTATTCTCAGACATCTGATTTAGGCGCTGAAATGCTCGCCTTTGATGCACAATCAAACAAAGGGGACCCCATGTTTCAGTCTTTCGGATCGAGTCATTTAAGTCAGGTGGCCACAGCACAGAATCACAGAAATAATGATAAGATGAACGTACCAGACGGCTACACCCCTTACCATCCTTGTGAAGGATATCCACTTGGTTGA MFSNSTKNQQKRKKKQKRRRRRMEWPNQQQQNNQTEQLQIQVEQLSNGDGVGGLYVKVMTDEQMELLRHQISVYATICEQLVEMHKAITAHQDLAGIRVGNLYCDQIMASAAGHKISARQRWTPTPVQLQILEQIFDEGNGTPSKQKIKEITLHLTQHGQISEANVYNWFQNRRARSKRKQANSTPNNPDSEPDTEVDSPKDKKTKPETFQTYDQFVSNSNNVYSQTSDLGAEMLAFDAQSNKGDPMFQSFGSSHLSQVATAQNHRNNDKMNVPDGYTPYHPCEGYPLG Homology
BLAST of CmaCh01G020230 vs. ExPASy Swiss-Prot
Match: Q5QMM3 (WUSCHEL-related homeobox 8 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX8 PE=2 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 1.1e-57 Identity = 135/258 (52.33%), Postives = 169/258 (65.50%), Query Frame = 0
BLAST of CmaCh01G020230 vs. ExPASy Swiss-Prot
Match: O81788 (WUSCHEL-related homeobox 13 OS=Arabidopsis thaliana OX=3702 GN=WOX13 PE=2 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 9.6e-57 Identity = 139/273 (50.92%), Postives = 176/273 (64.47%), Query Frame = 0
BLAST of CmaCh01G020230 vs. ExPASy Swiss-Prot
Match: Q9LM84 (WUSCHEL-related homeobox 14 OS=Arabidopsis thaliana OX=3702 GN=WOX14 PE=1 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 2.1e-35 Identity = 87/184 (47.28%), Postives = 125/184 (67.93%), Query Frame = 0
BLAST of CmaCh01G020230 vs. ExPASy Swiss-Prot
Match: Q9LM83 (Putative WUSCHEL-related homeobox 10 OS=Arabidopsis thaliana OX=3702 GN=WOX10 PE=3 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 5.7e-33 Identity = 80/181 (44.20%), Postives = 119/181 (65.75%), Query Frame = 0
BLAST of CmaCh01G020230 vs. ExPASy Swiss-Prot
Match: B8B644 (WUSCHEL-related homeobox 11 OS=Oryza sativa subsp. indica OX=39946 GN=WOX11 PE=3 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 2.1e-11 Identity = 36/77 (46.75%), Postives = 49/77 (63.64%), Query Frame = 0
BLAST of CmaCh01G020230 vs. ExPASy TrEMBL
Match: A0A6J1J2U9 (WUSCHEL-related homeobox 8-like OS=Cucurbita maxima OX=3661 GN=LOC111480837 PE=4 SV=1) HSP 1 Score: 535.8 bits (1379), Expect = 1.1e-148 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0
BLAST of CmaCh01G020230 vs. ExPASy TrEMBL
Match: A0A6J1FSA1 (WUSCHEL-related homeobox 8-like OS=Cucurbita moschata OX=3662 GN=LOC111446408 PE=4 SV=1) HSP 1 Score: 517.3 bits (1331), Expect = 4.1e-143 Identity = 262/271 (96.68%), Postives = 266/271 (98.15%), Query Frame = 0
BLAST of CmaCh01G020230 vs. ExPASy TrEMBL
Match: A0A6J1C9D0 (WUSCHEL-related homeobox 8-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009420 PE=4 SV=1) HSP 1 Score: 440.3 bits (1131), Expect = 6.4e-120 Identity = 227/273 (83.15%), Postives = 242/273 (88.64%), Query Frame = 0
BLAST of CmaCh01G020230 vs. ExPASy TrEMBL
Match: A0A0A0L5X4 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G663700 PE=4 SV=1) HSP 1 Score: 435.6 bits (1119), Expect = 1.6e-118 Identity = 224/269 (83.27%), Postives = 240/269 (89.22%), Query Frame = 0
BLAST of CmaCh01G020230 vs. ExPASy TrEMBL
Match: A0A5A7VAN2 (WUSCHEL-related homeobox 8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00560 PE=4 SV=1) HSP 1 Score: 430.3 bits (1105), Expect = 6.6e-117 Identity = 222/269 (82.53%), Postives = 239/269 (88.85%), Query Frame = 0
BLAST of CmaCh01G020230 vs. NCBI nr
Match: XP_022981799.1 (WUSCHEL-related homeobox 8-like [Cucurbita maxima]) HSP 1 Score: 535.8 bits (1379), Expect = 2.3e-148 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0
BLAST of CmaCh01G020230 vs. NCBI nr
Match: XP_023522322.1 (WUSCHEL-related homeobox 8-like [Cucurbita pepo subsp. pepo] >XP_023522329.1 WUSCHEL-related homeobox 8-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 520.0 bits (1338), Expect = 1.3e-143 Identity = 261/270 (96.67%), Postives = 265/270 (98.15%), Query Frame = 0
BLAST of CmaCh01G020230 vs. NCBI nr
Match: XP_022940990.1 (WUSCHEL-related homeobox 8-like [Cucurbita moschata] >KAG6608640.1 WUSCHEL-related homeobox 8, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037957.1 WUSCHEL-related homeobox 8 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 517.3 bits (1331), Expect = 8.5e-143 Identity = 262/271 (96.68%), Postives = 266/271 (98.15%), Query Frame = 0
BLAST of CmaCh01G020230 vs. NCBI nr
Match: XP_022138301.1 (WUSCHEL-related homeobox 8-like isoform X2 [Momordica charantia]) HSP 1 Score: 440.3 bits (1131), Expect = 1.3e-119 Identity = 227/273 (83.15%), Postives = 242/273 (88.64%), Query Frame = 0
BLAST of CmaCh01G020230 vs. NCBI nr
Match: XP_004145546.1 (WUSCHEL-related homeobox 8 [Cucumis sativus]) HSP 1 Score: 435.6 bits (1119), Expect = 3.2e-118 Identity = 224/269 (83.27%), Postives = 240/269 (89.22%), Query Frame = 0
BLAST of CmaCh01G020230 vs. TAIR 10
Match: AT4G35550.1 (WUSCHEL related homeobox 13 ) HSP 1 Score: 221.9 bits (564), Expect = 6.8e-58 Identity = 139/273 (50.92%), Postives = 176/273 (64.47%), Query Frame = 0
BLAST of CmaCh01G020230 vs. TAIR 10
Match: AT1G20700.1 (WUSCHEL related homeobox 14 ) HSP 1 Score: 151.0 bits (380), Expect = 1.5e-36 Identity = 87/184 (47.28%), Postives = 125/184 (67.93%), Query Frame = 0
BLAST of CmaCh01G020230 vs. TAIR 10
Match: AT1G20710.1 (WUSCHEL related homeobox 10 ) HSP 1 Score: 142.9 bits (359), Expect = 4.0e-34 Identity = 80/181 (44.20%), Postives = 119/181 (65.75%), Query Frame = 0
BLAST of CmaCh01G020230 vs. TAIR 10
Match: AT5G45980.1 (WUSCHEL related homeobox 8 ) HSP 1 Score: 70.9 bits (172), Expect = 1.9e-12 Identity = 29/62 (46.77%), Postives = 45/62 (72.58%), Query Frame = 0
BLAST of CmaCh01G020230 vs. TAIR 10
Match: AT3G18010.1 (WUSCHEL related homeobox 1 ) HSP 1 Score: 68.2 bits (165), Expect = 1.3e-11 Identity = 28/66 (42.42%), Postives = 45/66 (68.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|