CmaCh01G019760 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh01G019760
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	BRCA1-A complex subunit BRE
Location	Cma_Chr01: 12723897 .. 12728947 (-)
RNA-Seq Expression	CmaCh01G019760
Synteny	CmaCh01G019760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCAAGTCATTTTAGGGTTTCCTCCTCCGCTACCCATTGACGATTTTGCCCCTGCTTTTTTGGGCCAGAATTTCTCCTCATGGACCCATAACGTGAGACTTCAGTAAAAGGCCCAAGCTCGGCAATCGAGCCCATTGGCCCATTTTGAGACTTGAATTTACTAAAGTCGCAGTCTAGATTTGTGGTTCGGTAAAGTCGTGGAAGAAGGCAGCGGTCAAGAATTTTGAGCTGTTCGTGGATCGAAAATAGAGGCCTCTTCGCGGTAAGAGGGTTGTGGTGTGATTTTCCTGCGCTGATTCGGAAGGTGTTCATTGCTGTTTCAGCTGAGTGGCTCTCCAGATCGATTGCCGGCGATAAACCGAGTAATTTCATTGTTTAGCTTAGCTGCTAAGGCCATGTCTTCCGATACTGTACCTCCTCTCATTGCTGCTCAAATCAATTACCTGCGCAATCACTTTCCTCTCCCCTTAATGGTAAACATTTCCGCTTACTATCTCTTCCTTGAAAATTCAGGGATAACAAACATTTCCGCTTACTATCTCTTCCTTGATCGGAAATGGATGATATTTGGAGTTCTTTCTTTCTTTTTTCCCTCCATTTTCCCACCCCGATGATAGTATTTAGTGTCGCTATAATATGGCGATAGAAAGCGAACGGTTTTTTGAACAGATCACTTATTCTTACTGTTTTGATATTCAGATTGAGAACATGTGGTCTGGCAGTAGACACTACCCTGGAATCATCGATAGGTTCACCTTAGTCATACCTTACTGCCTTGAATTCGTCAAATGTAAGACCTGTTTTCCATTGTTGTTATCATAATATCCTTTCAATTCTTTTCTCTTTCCCTGTAAATGGTTGACAGATTCACCGTACCTAGCTGTTTGATAGCTGTTACCTGTTGTAGGGGACATCATGTATGATGCTGAATCGCCATTTTCTGCACCTGATATTGTGTTTGGACCAGAAGATGAAAATTTCCATCCATTCACAAGTAAGGTTGATGAAGGAGAAGGATATCATGATTCCTTACAAAACAGTCTACGTGACTGGAACAGCAAAGATCCATCTCGGCTCACTAGCCTCCTTCAAGAACTGAGGTTCTTCAGGGCTTTCCTTTGATTGAGCCTTCTTCTGTTTCTAATGTTTTGGGTATAATTCAGCTTGAATTCAAAGGCAACTTTACTTTTTTTAAGGGATCGATATGCATCATACCAAAGGAAACGGGTTGAAGGAGTTGAGGATGAAAGATTGAAGTTTGAACTCTGTACTATGTTATCTAGGGAGGTAACGTTCTTCATTATATGTTTATTACACTGTCCTAACTCTGTTTTGATAATCAATTGCATGAGTTTAGGAATTTAAGGGGTCGGGTATTGGACTTGGTTTCTTGATAATACATTCTTGCTGGATGCCTGTAGAAATGTATAAAACTTTATAATTTAGTTTTCATGCTTGGAAACTGAATGAGAGAACTGCTGCTAGTTAATTATTCCAGATTTTTCATGCTTGAATTATAGTAGTGTAGAAGTTAAACCATCCCTATAATGTTTTTTTTTTTTTTGCTTATAACCATGTATTCCTTTAGTTGGGCAAGCTGCTCCTTATACAGATATCTGTGTTCTTTCCTTAAGGTTCTTTTATTTTCAATGGTAACTTAACCAAAACTACCTTTCTGCAGGGAATTGAAATGCATTTGAGTTCAGGTGTTGAGAAGGTAGTATTTTAAAGTATGTGGTTGTACTTTCCTTGAATAGTAAAGAGCTGATACTGAGAATTCTATTCTCTTTATTCTCATATGTGTGGCTTCTATGCCTTTGAATTTTAGTATAGCCAGAGGATGTCAAATTTGCAGTGCCATTAGTAGACATTAATATTAATAAGATGATACCTGGATGCCCATGGAGGCACCCACAGAAGATATTTTTGCAGGTTTCCTTTCTGAACTTCTGGTTTTCCTGTTCCTCTATTATTTCCCATTCTCATCATTGTTTATAGGTTTTATATCCTGTGGTGAGAAAATATGCGTCTACTCCTGCTGCACCTCGTCTGAAATTGGTCTCCACGTCTGAGTTGAAGGCTCTATTATCCATCGAGGACATCAAACTTCCTTCATGGATAGATGGAATGTAGGATACTCTCTCTCTTGTATCTCATTTCTATTTCTGCAGCGGTCAAGATTACATGGTAAAATTGATATCATTTTTTTTTTTTAACTGGCTTCAAGGTGCATGGCTGAATATCTTCCCCATCTAGAAGAGAGTCTTGAGAAACAGGTTGGTTAGATTTTTTTTTTTTTTTAACTCTCTGGGTTGATTAACTTGGTCTTTAGTTTTGGAAGTTGCCTAAAGTTGAAATTTTGTACTTTTATCATTCTGATGAAGGTACTGGATGCAGTTTCGTTGATCAATGTTAGGAGACGTTTTATAGAGGCGTTGAACTCTTTCTTTGGAAGGCCTCTAGAAGCTGATCCGGTGGGATTCTTACAAATTTATTTACATCCGTCGTCTTCATTTGTTGAAAATCATCATCCAATTCTTAATTTAAGTGGTGGGGGGTCGTCAAATTTTACTGATGATATGATTTTTTTTTTTTTTTTAGGTGTTCTGTCGAACGGCTACAGTTATCGCTGCCTCCGGCGTGTTCACATTCCTGGTATTGGCTTCACTATCCTTAATATGTAGTATCCCATCACTATGTGGATTTTTTTTTCGATTATTTACTATGAAAAAGAATATTGTTCACGTAATGGTTAGTTAATTCTGGCGATTGATAGGTTTCTTTAACTCACGATCATGTTTTCAAAATCTGCGGATGTTAGGATTAGCACCCTGGTCTGTAGATCTTCAGATAGCATAATATTGACTAGATGATCACCACCCAAAATATTTGGTACAATATTCTGGGGTCCAGTGCTGACAAAGATAGCCTTCAAATTTTCATTTTTCAGAGAGAAGCCCGAAATAAAGGATCCCTAACAACAAAAACAAAACAGTGAATAATTTTATAAAAGGGGAAAAGAAAGAGAATAAAATTTGTAGAGAACATCCAAACATAGGCATTAAAGAAAGCGACACTCACTCTAAACTTCCTTACAACACCTTTCTACATTCTTGAAGGAATGAACGTCTGCTTGAGAAACTGACAAACTCTGACATACCCCAACAACCCGTACTTGGATTATTAGCTCTCACCACTGAGAAATGTCCTCAAATCTTTACAACAAAGTGGCATCTCCATAAAACATAATCTAATTCTTCCAATGCCCTTCCGCATAAAATACACCACTGAGACCCACAACCGAAGATGAATGTTTGACCAGTTCATGATGTCAAATTTGATTATTTTGACTATGCGTAGGTCAAATATTGACCTTGCTAACTGATTTCTACTTTTTATTTTTTTGCTGAAGAAATGCGTTATCTCATTGAATTGGATGATAGCCAAAACATTTTGCAACTATTTATCCTTTCAAATGGTTTCTCTATTCCGTCCAGTTTCTATGAGACATTTTCGTGACACAGTTTCACACAAATCTTTCTTTTGATATCATATGTATAATAATTTGGAACAGAAGGTATGCTAGACTTGCAAATCTCTTGATGGTTAATGATTTGCTGATCGCACTAAGGATACTGGATCGGTGGTAAATGCTTTAAAAATTCTTTTGGTTTTAAATTAAACAACGATAGTGTGTATTGATCTGGTAAGATGGGGCATGGAATGCAGTTAATGTTTATTGATTGACAAAATAGTTGAGTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATATATATATATATAATAAGAGACAACATAGGAATTTATTTTCCTTTCCCTTGTTTTTCTGGGAATTTTTTGTTAATGCTAGGTCCATTTCCTCATGTCAACCCAATTTCCAAAGAAACAACCCTCTCTTGTGCTGCAAAGTTCTCAGGTAATGTAAATTTGTCTTTAATCTTGAAATTCTTGTGCATTCCAACTTTGCTTACTAGTACATATGACAAAGGCCATGAATATATGCTTCTATGTTTTTCATCAACATGCTCCTGTGGTCGTCCAAACTCTCCTTTATTTGGACTCCGTTATCATTTGTATTTTTCTAAAAAATCTGTACATTGTGACTAATGATCGTAAATATGTTAATAGGGAATATTTGGTTAATCAATTTTTATGAGGACGCATGTCTTGAAGTGATTAAATGACATGATAGGTGCAATCTGTATAACTCTAGTTTCCAAGGATGTTTCTGTTCATTGTGAATCGGACTGGCATCATTAAGATGGCTTCTTATTTTTATCAATATTTGATGGGCCTACTAGGTTTTATAAAGATCCCTTCTTGGATTATTGGTTTAGTACCCTCTTTTTCTAATTATGTCCATATATTGTTCAGCATTTCAACTCTCAAGGTGCACCCATAAAGTCGCAGCTTATCACCGACTATCCTTGGAGTCCTAGGTGGGAGCCATTGCAAATGGCTGAGCGGGTTTTGTAAGTTGTTTATCTATCTCTCATTTTCTCATTTGCATATACATTCACTTATCAATCGGGTTAATACCGTTTGGTTCGATTTTAACAGCGAGTTTCTGGCTGATGAGGCTTTGAGCTTCAAGAGGTATTGCAACGAGGCTCAACTTCAATGATTGGATTATGAAAACTCTGGTCAATCTGCCCTAACATGTAACAGTCCAATACCAGTTATGTATAGTTGGTTTGTTGAGTACTTTTAAATCTTGGCATTTTTAGATTGATTTTTGTCACCTCTTTGGGGCTGTCTCTCTCCTCAATGAGGATGATTCGAAGGTACATTTTATCAAGAACCGGATATGAGCTTTCAAATATAGAGAATCCGTATCTGTTATAAAAGTCGAATCCAGAAACAAAAGACTGACCCTCAACCGACCCTCAACGGGGCTGACCATGATTGTTGTATTACATTTTTTTTCTGTTGAACAGAACAAAATCAACTGACCAATTATGCGTGTTGCTTAAAATGCTCTCTTTGTAGGATCGGAC

mRNA sequence

ATGGGCAAGTGTTCATTGCTGTTTCAGCTGAGTGGCTCTCCAGATCGATTGCCGGCGATAAACCGAGTAATTTCATTGTTTAGCTTAGCTGCTAAGGCCATGTCTTCCGATACTGTACCTCCTCTCATTGCTGCTCAAATCAATTACCTGCGCAATCACTTTCCTCTCCCCTTAATGATTGAGAACATGTGGTCTGGCAGTAGACACTACCCTGGAATCATCGATAGGTTCACCTTAGTCATACCTTACTGCCTTGAATTCGTCAAATGGGACATCATGTATGATGCTGAATCGCCATTTTCTGCACCTGATATTGTGTTTGGACCAGAAGATGAAAATTTCCATCCATTCACAAGTAAGGTTGATGAAGGAGAAGGATATCATGATTCCTTACAAAACAGTCTACGTGACTGGAACAGCAAAGATCCATCTCGGCTCACTAGCCTCCTTCAAGAACTGAGGGATCGATATGCATCATACCAAAGGAAACGGGTTGAAGGAGTTGAGGATGAAAGATTGAAGTTTGAACTCTGTACTATGTTATCTAGGGAGGGAATTGAAATGCATTTGAGTTCAGGTGTTGAGAAGCCAGAGGATGTCAAATTTGCAGTGCCATTAGTAGACATTAATATTAATAAGATGATACCTGGATGCCCATGGAGGCACCCACAGAAGATATTTTTGCAGGTTTTATATCCTGTGGTGAGAAAATATGCGTCTACTCCTGCTGCACCTCGTCTGAAATTGGTCTCCACGTCTGAGTTGAAGGCTCTATTATCCATCGAGGACATCAAACTTCCTTCATGGATAGATGGAATGTGCATGGCTGAATATCTTCCCCATCTAGAAGAGAGTCTTGAGAAACAGGTACTGGATGCAGTTTCGTTGATCAATGTTAGGAGACGTTTTATAGAGGCGTTGAACTCTTTCTTTGGAAGGCCTCTAGAAGCTGATCCGGTGTTCTGTCGAACGGCTACAGTTATCGCTGCCTCCGGCGTGTTCACATTCCTGGTCCATTTCCTCATGTCAACCCAATTTCCAAAGAAACAACCCTCTCTTGTGCTGCAAAGTTCTCAGCATTTCAACTCTCAAGGTGCACCCATAAAGTCGCAGCTTATCACCGACTATCCTTGGAGTCCTAGGTGGGAGCCATTGCAAATGGCTGAGCGGGTTTTCGAGTTTCTGGCTGATGAGGCTTTGAGCTTCAAGAGGTATTGCAACGAGGCTCAACTTCAATGATTGGATTATGAAAACTCTGGTCAATCTGCCCTAACATGTAACAGTCCAATACCAGTTATGTATAGTTGGTTTGTTGAGTACTTTTAAATCTTGGCATTTTTAGATTGATTTTTGTCACCTCTTTGGGGCTGTCTCTCTCCTCAATGAGGATGATTCGAAGGTACATTTTATCAAGAACCGGATATGAGCTTTCAAATATAGAGAATCCGTATCTGTTATAAAAGTCGAATCCAGAAACAAAAGACTGACCCTCAACCGACCCTCAACGGGGCTGACCATGATTGTTGTATTACATTTTTTTTCTGTTGAACAGAACAAAATCAACTGACCAATTATGCGTGTTGCTTAAAATGCTCTCTTTGTAGGATCGGAC

Coding sequence (CDS)

ATGGGCAAGTGTTCATTGCTGTTTCAGCTGAGTGGCTCTCCAGATCGATTGCCGGCGATAAACCGAGTAATTTCATTGTTTAGCTTAGCTGCTAAGGCCATGTCTTCCGATACTGTACCTCCTCTCATTGCTGCTCAAATCAATTACCTGCGCAATCACTTTCCTCTCCCCTTAATGATTGAGAACATGTGGTCTGGCAGTAGACACTACCCTGGAATCATCGATAGGTTCACCTTAGTCATACCTTACTGCCTTGAATTCGTCAAATGGGACATCATGTATGATGCTGAATCGCCATTTTCTGCACCTGATATTGTGTTTGGACCAGAAGATGAAAATTTCCATCCATTCACAAGTAAGGTTGATGAAGGAGAAGGATATCATGATTCCTTACAAAACAGTCTACGTGACTGGAACAGCAAAGATCCATCTCGGCTCACTAGCCTCCTTCAAGAACTGAGGGATCGATATGCATCATACCAAAGGAAACGGGTTGAAGGAGTTGAGGATGAAAGATTGAAGTTTGAACTCTGTACTATGTTATCTAGGGAGGGAATTGAAATGCATTTGAGTTCAGGTGTTGAGAAGCCAGAGGATGTCAAATTTGCAGTGCCATTAGTAGACATTAATATTAATAAGATGATACCTGGATGCCCATGGAGGCACCCACAGAAGATATTTTTGCAGGTTTTATATCCTGTGGTGAGAAAATATGCGTCTACTCCTGCTGCACCTCGTCTGAAATTGGTCTCCACGTCTGAGTTGAAGGCTCTATTATCCATCGAGGACATCAAACTTCCTTCATGGATAGATGGAATGTGCATGGCTGAATATCTTCCCCATCTAGAAGAGAGTCTTGAGAAACAGGTACTGGATGCAGTTTCGTTGATCAATGTTAGGAGACGTTTTATAGAGGCGTTGAACTCTTTCTTTGGAAGGCCTCTAGAAGCTGATCCGGTGTTCTGTCGAACGGCTACAGTTATCGCTGCCTCCGGCGTGTTCACATTCCTGGTCCATTTCCTCATGTCAACCCAATTTCCAAAGAAACAACCCTCTCTTGTGCTGCAAAGTTCTCAGCATTTCAACTCTCAAGGTGCACCCATAAAGTCGCAGCTTATCACCGACTATCCTTGGAGTCCTAGGTGGGAGCCATTGCAAATGGCTGAGCGGGTTTTCGAGTTTCTGGCTGATGAGGCTTTGAGCTTCAAGAGGTATTGCAACGAGGCTCAACTTCAATGA

Protein sequence

MGKCSLLFQLSGSPDRLPAINRVISLFSLAAKAMSSDTVPPLIAAQINYLRNHFPLPLMIENMWSGSRHYPGIIDRFTLVIPYCLEFVKWDIMYDAESPFSAPDIVFGPEDENFHPFTSKVDEGEGYHDSLQNSLRDWNSKDPSRLTSLLQELRDRYASYQRKRVEGVEDERLKFELCTMLSREGIEMHLSSGVEKPEDVKFAVPLVDININKMIPGCPWRHPQKIFLQVLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGMCMAEYLPHLEESLEKQVLDAVSLINVRRRFIEALNSFFGRPLEADPVFCRTATVIAASGVFTFLVHFLMSTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERVFEFLADEALSFKRYCNEAQLQ

Homology

[Close]

BLAST of CmaCh01G019760 vs. ExPASy Swiss-Prot
Match: B6NXD5 (BRISC and BRCA1-A complex member 2 OS=Branchiostoma floridae OX=7739 GN=BABAM2 PE=3 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.3e-27
Identity = 90/337 (26.71%), Postives = 159/337 (47.18%), Query Frame = 0


Query: 75  DRFTLVIPYCLEFVKWDIMYDAESPFSAPDIVFGPEDENFHPFTSKVDEGEGYHDSLQNS 134
           DRF + IP+  + +KW++++D+  P + PD +F  E+ NF P   K++           +
Sbjct: 56  DRFKIYIPFAGDSLKWEVIFDSCQPSNPPDFIFLGENGNFDPDIEKLE-----------N 115

Query: 135 LRDWNSKDPSRLTSLLQELRDRYASYQRKRVEGVEDERLKFELCTMLSREG---IEMHLS 194
           L  W+ K+P  L   +++L   Y  YQ++ +EG    RL+FE  ++   E    +E+H+ 
Sbjct: 116 LTHWDPKNPESLVLAIEDLMREYRCYQKQLIEGY--SRLQFEYSSLQGMEACDDVEVHMG 175

Query: 195 SGVEKPED--VKFAVPL-VDININKMIPGCPWRHPQKIFLQVLYPVVRKYASTPAAPRLK 254
           + +    D  V F + L +D++    IP    +      L VL         +   P+L 
Sbjct: 176 NRLPGTLDSPVNFLIRLPIDLS---PIPQYLVKDDPGEDLAVLLAKFHNSEGSRVTPQLF 235

Query: 255 LVSTSELKALLSIEDIKLPSWIDGMCMAEYLPHLEESLEKQVLDAVSLINVRRRFIEA-L 314
           L    E  AL     +++P +  G C+ +Y+P +++ L+KQ+   V     RR ++ A +
Sbjct: 236 LSPKVE-HALGDNTALRIPRFPTGGCLMDYVPQVQDFLQKQIDHIVEGYQRRREYVAAFI 295

Query: 315 NSFFGRPLEADPVFCRTATVIAASGVFTFLVHFLMSTQFPKKQPSLVLQSSQHFNSQGAP 374
           + F G  LE D       +++     F F++H  + ++FP+  P    QS  H +     
Sbjct: 296 SRFGGSVLEYDAESFTKLSLVLEWNEFFFVLHIELPSRFPQDMPVFTFQSCYHLSKTNGE 355

Query: 375 IKSQLITDYPWSPRWEPLQMAERVFEFLADEALSFKR 405
               +   YP+SPRW   +MA R   F+ D    FK+
Sbjct: 356 PYVSVQKSYPYSPRWTGEEMAHRAKLFILDFIPQFKK 375

[Close]

BLAST of CmaCh01G019760 vs. ExPASy Swiss-Prot
Match: Q568D5 (BRISC and BRCA1-A complex member 2 OS=Danio rerio OX=7955 GN=babam2 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.1e-26
Identity = 101/332 (30.42%), Postives = 157/332 (47.29%), Query Frame = 0


Query: 75  DRFTLVIPYCLEFVKWDIMYDAESPFSAPDIVFGPEDENFHPFTSKVDEGEGYHDSLQNS 134
           DRF L IPY  E +KWDI+++A  P   PD +FG ED +F P  S++            +
Sbjct: 57  DRFKLHIPYAGETLKWDIIFNARDPELPPDFIFG-EDADFLPEPSELP-----------N 116

Query: 135 LRDWNSKDPSRLTSLLQELRDRYASYQRKRVEGVEDERLKFELCTMLS--REGIEMHLSS 194
           L  W+S  P  L  L++E+  +Y  YQ +R+   +  RL FE  ++L     G  M + +
Sbjct: 117 LVSWDSGKPECLLLLVKEMLQQYHQYQCQRLR--DSSRLLFEYDSLLEDPNYGRNMEIYA 176

Query: 195 GVEKPEDVKFA-------------VPLVDININKMIPGCPWRHPQKIFLQVLYPVVRKYA 254
           G +     +F+             +P+  +    + PG          L V +       
Sbjct: 177 GRKNSWTGEFSARFLLKLPVDFSNIPIYLLKDTALDPG-----EDVALLSVSF---EDAE 236

Query: 255 STPAAPRLKLVSTSELKALLSIEDIKLPSWIDGMCMAEYLPHLEESLEKQVLDAVSLINV 314
           +T   P+L L S S   AL     + +P++  G C+ +Y+P + + L  +V   +   + 
Sbjct: 237 ATQVFPKLYL-SPSIEHALGGSSALHIPAFPSGGCLIDYVPQVCQLLTNKVQYVIQGYHK 296

Query: 315 RRRFIEALNSFFGR-PLEADPVFCRTATVIAASGVFTFLVHFLMSTQFPKKQPSLVLQSS 374
           RR +I A  S FG   +E D V     T++     F FLVH  +   FP+ QP+L  QS 
Sbjct: 297 RREYIAAFLSHFGMGVVEYDAVGFTKLTLLLMWKDFCFLVHVDLPLYFPRDQPTLTFQSI 356

Query: 375 QHFNSQGAPIKSQLITDYPWSPRWEPLQMAER 391
            HF S G  + SQ+   YP+SPRW+  +MA+R
Sbjct: 357 YHFTSSG-QLYSQVQKSYPYSPRWDGNEMAKR 364

[Close]

BLAST of CmaCh01G019760 vs. ExPASy Swiss-Prot
Match: Q6DJ78 (BRISC and BRCA1-A complex member 2 OS=Xenopus tropicalis OX=8364 GN=babam2 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.5e-26
Identity = 100/332 (30.12%), Postives = 155/332 (46.69%), Query Frame = 0


Query: 75  DRFTLVIPYCLEFVKWDIMYDAESPFSAPDIVFGPEDENFHPFTSKVDEGEGYHDSLQNS 134
           DRF L IPY  E +KWDI+++A  P   PD +FG ED  F P  S +           ++
Sbjct: 54  DRFKLHIPYAGETLKWDIIFNATYPELPPDFIFG-EDAEFLPDPSAL-----------HN 113

Query: 135 LRDWNSKDPSRLTSLLQELRDRYASYQRKRVEGVEDERLKFELCTMLS--REGIEMHLSS 194
           L +WN  DP  L  +++EL  +Y  YQ  R+   E  RL FE  T+    + G  M + +
Sbjct: 114 LAEWNPSDPECLLLVVKELVQQYHQYQCSRLS--ESSRLMFEYQTLQEEPQYGENMEIYA 173

Query: 195 GVEKPEDVKFA-------------VPLVDININKMIPGCPWRHPQKIFLQVLYPVVRKYA 254
           G +     +F+             +P+  +  +   PG          L V +       
Sbjct: 174 GKKNNWTGEFSARFLLKLPVDFSNIPIYLLKDSNEDPG-----EDVALLSVSF---EDAE 233

Query: 255 STPAAPRLKLVSTSELKALLSIEDIKLPSWIDGMCMAEYLPHLEESLEKQVLDAVSLINV 314
           +T   P+L L    E  AL     + +P++  G C+ +Y+P + + L  +V   +   + 
Sbjct: 234 ATQVFPKLFLSPRIE-HALGGSSALHIPAFPSGSCLIDYVPQVCQLLTNKVQYVIQGYHK 293

Query: 315 RRRFIEALNSFFGR-PLEADPVFCRTATVIAASGVFTFLVHFLMSTQFPKKQPSLVLQSS 374
           RR +I A  S FG   +E D       T++ +   F FLVH  +   FP+ QP+L  QS 
Sbjct: 294 RREYIAAFLSHFGTGVVEYDAEGFTKLTLLLSWKDFCFLVHIDLPLYFPRDQPTLTFQSV 353

Query: 375 QHFNSQGAPIKSQLITDYPWSPRWEPLQMAER 391
            HF + G  + SQ   +YP+SPRW+  +MA+R
Sbjct: 354 YHFTNSG-QLYSQAQKNYPYSPRWDGNEMAKR 361

[Close]

BLAST of CmaCh01G019760 vs. ExPASy Swiss-Prot
Match: Q6SP92 (BRISC and BRCA1-A complex member 2 OS=Mesocricetus auratus OX=10036 GN=Babam2 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 4.3e-26
Identity = 100/325 (30.77%), Postives = 155/325 (47.69%), Query Frame = 0


Query: 75  DRFTLVIPYCLEFVKWDIMYDAESPFSAPDIVFGPEDENFHPFTSKVDEGEGYHDSLQNS 134
           DRF L IPY  E +KWDI+++A+ P   PD +FG ED  F P  S +           ++
Sbjct: 54  DRFKLHIPYAGESLKWDIIFNAQYPELPPDFIFG-EDAEFLPDPSAL-----------HN 113

Query: 135 LRDWNSKDPSRLTSLLQELRDRYASYQRKRVEGVEDERLKFELCTMLS--REGIEMHLSS 194
           L  WN  DP  L  +++EL  +Y  +Q  R+   E  RL FE  T+L   + G  M + +
Sbjct: 114 LASWNPSDPECLLLVVKELVQQYHQFQCSRLR--ESSRLMFEYQTLLEEPQYGENMEIYA 173

Query: 195 GVEKPEDVKFA------VPLVDININKMIPGCPWRHPQKIFLQVLYPVVRKYASTPAAPR 254
           G +     +F+      +P+   NI   +       P +  + +L        +T   P+
Sbjct: 174 GKKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGE-DVALLSVSFEDTEATQVYPK 233

Query: 255 LKLVSTSELKALLSIEDIKLPSWIDGMCMAEYLPHLEESLEKQVLDAVSLINVRRRFIEA 314
           L L    E  AL     + +P++  G C+ +Y+P +   L  +V   +   + RR +I A
Sbjct: 234 LYLSPRIE-HALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAA 293

Query: 315 LNSFFGR-PLEADPVFCRTATVIAASGVFTFLVHFLMSTQFPKKQPSLVLQSSQHFNSQG 374
             S FG   +E D       T++     F FLVH  +   FP+ QP+L  QS  HF + G
Sbjct: 294 FLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSG 353

Query: 375 APIKSQLITDYPWSPRWEPLQMAER 391
             + SQ   +YP+SPRW+  +MA+R
Sbjct: 354 -QLYSQAQKNYPYSPRWDGNEMAKR 361

[Close]

BLAST of CmaCh01G019760 vs. ExPASy Swiss-Prot
Match: Q6GPL9 (BRISC and BRCA1-A complex member 2 OS=Xenopus laevis OX=8355 GN=babam2 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 7.3e-26
Identity = 100/333 (30.03%), Postives = 156/333 (46.85%), Query Frame = 0


Query: 75  DRFTLVIPYCLEFVKWDIMYDAESPFSAPDIVFGPEDENFHPFTSKVDEGEGYHDSLQNS 134
           DRF L IPY  E +KWDI+++A  P   PD +FG ED  F P  S +           ++
Sbjct: 54  DRFKLHIPYAGETLKWDIIFNASYPELPPDFIFG-EDAEFLPDPSAL-----------HN 113

Query: 135 LRDWNSKDPSRLTSLLQELRDRYASYQRKRVEGVEDERLKFELCTMLS--REGIEMHLSS 194
           L +WN  DP  L  +++EL  +Y  YQ  R+   E  RL FE  T+    + G+ M + +
Sbjct: 114 LSEWNPSDPECLLLVVKELVQQYHQYQCSRLS--ESSRLMFEYQTLQEEPQYGLNMEIYA 173

Query: 195 GVEKPEDVKFA-------------VPLVDININKMIPGCPWRHPQKIFLQVLYPVVRKYA 254
           G +     +F+             +P+  +  +   PG          L V +       
Sbjct: 174 GKKNNWTGEFSARFLLKMPVDFSNIPIYLLKDSNEDPG-----EDVALLSVSF---EDAE 233

Query: 255 STPAAPRLKLVSTSELKALLSIEDIKLPSWIDGMCMAEYLPHLEESLEKQVLDAVSLINV 314
           +T   P+L L    E  AL     + +P +  G C+ +Y+P + + L  +V   +   + 
Sbjct: 234 ATQVFPKLFLSPRIE-HALGGSSALHIPVFPSGSCLIDYVPQVCQLLTNKVQYVIQGYHK 293

Query: 315 RRRFIEALNSFFGR-PLEADPVFCRTATVIAASGVFTFLVHFL-MSTQFPKKQPSLVLQS 374
           RR +I A  S FG   +E D       T++ +   F FLVH + +   FP+ QP+L  QS
Sbjct: 294 RREYIAAFLSHFGTGVVEYDAEGFTKLTLLLSWKDFCFLVHTVDLPLYFPRDQPTLTFQS 353

Query: 375 SQHFNSQGAPIKSQLITDYPWSPRWEPLQMAER 391
             HF + G  + SQ   +YP+SPRW+  +MA+R
Sbjct: 354 VYHFTNSG-QLYSQAQKNYPYSPRWDGNEMAKR 362

[Close]

BLAST of CmaCh01G019760 vs. ExPASy TrEMBL
Match: A0A6J1J2U1 (BRCA1-A complex subunit BRE OS=Cucurbita maxima OX=3661 GN=LOC111480831 PE=4 SV=1)

HSP 1 Score: 774.2 bits (1998), Expect = 2.6e-220
Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 0


Query: 34  MSSDTVPPLIAAQINYLRNHFPLPLMIENMWSGSRHYPGIIDRFTLVIPYCLEFVKWDIM 93
           MSSDTVPPLIAAQINYLRNHFPLPLMIENMWSGSRHYPGIIDRFTLVIPYCLEFVKWDIM
Sbjct: 1   MSSDTVPPLIAAQINYLRNHFPLPLMIENMWSGSRHYPGIIDRFTLVIPYCLEFVKWDIM 60

Query: 94  YDAESPFSAPDIVFGPEDENFHPFTSKVDEGEGYHDSLQNSLRDWNSKDPSRLTSLLQEL 153
           YDAESPFSAPDIVFGPEDENFHPFTSKVDEGEGYHDSLQNSLRDWNSKDPSRLTSLLQEL
Sbjct: 61  YDAESPFSAPDIVFGPEDENFHPFTSKVDEGEGYHDSLQNSLRDWNSKDPSRLTSLLQEL 120

Query: 154 RDRYASYQRKRVEGVEDERLKFELCTMLSREGIEMHLSSGVEKPEDVKFAVPLVDININK 213
           RDRYASYQRKRVEGVEDERLKFELCTMLSREGIEMHLSSGVEKPEDVKFAVPLVDININK
Sbjct: 121 RDRYASYQRKRVEGVEDERLKFELCTMLSREGIEMHLSSGVEKPEDVKFAVPLVDININK 180

Query: 214 MIPGCPWRHPQKIFLQVLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM 273
           MIPGCPWRHPQKIFLQVLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM
Sbjct: 181 MIPGCPWRHPQKIFLQVLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM 240

Query: 274 CMAEYLPHLEESLEKQVLDAVSLINVRRRFIEALNSFFGRPLEADPVFCRTATVIAASGV 333
           CMAEYLPHLEESLEKQVLDAVSLINVRRRFIEALNSFFGRPLEADPVFCRTATVIAASGV
Sbjct: 241 CMAEYLPHLEESLEKQVLDAVSLINVRRRFIEALNSFFGRPLEADPVFCRTATVIAASGV 300

Query: 334 FTFLVHFLMSTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERVFE 393
           FTFLVHFLMSTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERVFE
Sbjct: 301 FTFLVHFLMSTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERVFE 360

Query: 394 FLADEALSFKRYCNEAQLQ 413
           FLADEALSFKRYCNEAQLQ
Sbjct: 361 FLADEALSFKRYCNEAQLQ 379

[Close]

BLAST of CmaCh01G019760 vs. ExPASy TrEMBL
Match: A0A6J1FPK2 (BRCA1-A complex subunit BRE OS=Cucurbita moschata OX=3662 GN=LOC111446103 PE=4 SV=1)

HSP 1 Score: 766.1 bits (1977), Expect = 7.2e-218
Identity = 374/379 (98.68%), Postives = 377/379 (99.47%), Query Frame = 0


Query: 34  MSSDTVPPLIAAQINYLRNHFPLPLMIENMWSGSRHYPGIIDRFTLVIPYCLEFVKWDIM 93
           MSSDTVPPLIAAQINYLRNHFPLPLMIENMWSGSRHYPGIIDRFTLVIPYCLEFVKWDIM
Sbjct: 1   MSSDTVPPLIAAQINYLRNHFPLPLMIENMWSGSRHYPGIIDRFTLVIPYCLEFVKWDIM 60

Query: 94  YDAESPFSAPDIVFGPEDENFHPFTSKVDEGEGYHDSLQNSLRDWNSKDPSRLTSLLQEL 153
           YDAESPFSAPDI+FGPEDENFHPFTSKVDEGEGYHDSLQNSLRDWNSKDPSRLTSLLQEL
Sbjct: 61  YDAESPFSAPDIMFGPEDENFHPFTSKVDEGEGYHDSLQNSLRDWNSKDPSRLTSLLQEL 120

Query: 154 RDRYASYQRKRVEGVEDERLKFELCTMLSREGIEMHLSSGVEKPEDVKFAVPLVDININK 213
           RDRYASYQRKRVEGVEDERLKFELCTMLSREGIEMHLSSGVEKPEDVKFAVPLVDININK
Sbjct: 121 RDRYASYQRKRVEGVEDERLKFELCTMLSREGIEMHLSSGVEKPEDVKFAVPLVDININK 180

Query: 214 MIPGCPWRHPQKIFLQVLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM 273
           MIPGCPWRHPQKIFLQVLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM
Sbjct: 181 MIPGCPWRHPQKIFLQVLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM 240

Query: 274 CMAEYLPHLEESLEKQVLDAVSLINVRRRFIEALNSFFGRPLEADPVFCRTATVIAASGV 333
           CMAEYLPHLEESLEKQVL+AVSLINVRR FIEAL SFFGRPLEADPVFCRTATVIAASGV
Sbjct: 241 CMAEYLPHLEESLEKQVLEAVSLINVRRGFIEALGSFFGRPLEADPVFCRTATVIAASGV 300

Query: 334 FTFLVHFLMSTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERVFE 393
           FTFLVHFLMSTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAER+FE
Sbjct: 301 FTFLVHFLMSTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERIFE 360

Query: 394 FLADEALSFKRYCNEAQLQ 413
           FLADEALSFKRYCNEAQLQ
Sbjct: 361 FLADEALSFKRYCNEAQLQ 379

[Close]

BLAST of CmaCh01G019760 vs. ExPASy TrEMBL
Match: A0A0A0LDL1 (BRCA1-A complex subunit BRE OS=Cucumis sativus OX=3659 GN=Csa_3G872710 PE=4 SV=1)

HSP 1 Score: 730.3 bits (1884), Expect = 4.4e-207
Identity = 353/379 (93.14%), Postives = 370/379 (97.63%), Query Frame = 0


Query: 34  MSSDTVPPLIAAQINYLRNHFPLPLMIENMWSGSRHYPGIIDRFTLVIPYCLEFVKWDIM 93
           MSSDTVPP+IAA INYL NHFPLP+ IE+MWSGSRHYPGI+DRFTLV+PYCLEFVKWDIM
Sbjct: 1   MSSDTVPPIIAAHINYLLNHFPLPVKIEHMWSGSRHYPGIMDRFTLVMPYCLEFVKWDIM 60

Query: 94  YDAESPFSAPDIVFGPEDENFHPFTSKVDEGEGYHDSLQNSLRDWNSKDPSRLTSLLQEL 153
           Y+AESPFSAPDIVFGPEDENFHPF+SKVDEGEG H+SL NSLRDWNSKDPSRLTSLLQEL
Sbjct: 61  YNAESPFSAPDIVFGPEDENFHPFSSKVDEGEGDHNSLHNSLRDWNSKDPSRLTSLLQEL 120

Query: 154 RDRYASYQRKRVEGVEDERLKFELCTMLSREGIEMHLSSGVEKPEDVKFAVPLVDININK 213
           RDRY SYQRKRVEGV+DERLKFELCTMLSREGIEMHLSSGVEKPE+VKFAVPLVDININK
Sbjct: 121 RDRYVSYQRKRVEGVDDERLKFELCTMLSREGIEMHLSSGVEKPEEVKFAVPLVDININK 180

Query: 214 MIPGCPWRHPQKIFLQVLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM 273
           MIPGCPWRHPQKIFLQVLYPVVRKYA+TP+APRLKLVSTSELKALLSIEDIKLP+WIDGM
Sbjct: 181 MIPGCPWRHPQKIFLQVLYPVVRKYATTPSAPRLKLVSTSELKALLSIEDIKLPTWIDGM 240

Query: 274 CMAEYLPHLEESLEKQVLDAVSLINVRRRFIEALNSFFGRPLEADPVFCRTATVIAASGV 333
           CMAEYLPHLEESLEKQVL+AVSLI+VRR FIEALNSFFGRPLEADPVFCRTATVI ASGV
Sbjct: 241 CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALNSFFGRPLEADPVFCRTATVITASGV 300

Query: 334 FTFLVHFLMSTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERVFE 393
           FTFLVH L+STQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAER+FE
Sbjct: 301 FTFLVHILISTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERIFE 360

Query: 394 FLADEALSFKRYCNEAQLQ 413
           FLADEALSFKRYCNEAQLQ
Sbjct: 361 FLADEALSFKRYCNEAQLQ 379

[Close]

BLAST of CmaCh01G019760 vs. ExPASy TrEMBL
Match: A0A5D3E738 (BRCA1-A complex subunit BRE OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G008020 PE=4 SV=1)

HSP 1 Score: 728.8 bits (1880), Expect = 1.3e-206
Identity = 352/379 (92.88%), Postives = 371/379 (97.89%), Query Frame = 0


Query: 34  MSSDTVPPLIAAQINYLRNHFPLPLMIENMWSGSRHYPGIIDRFTLVIPYCLEFVKWDIM 93
           MS+DTVPPLIAA INYL NHFPLP+ IE+MWSGSRHYPGI+DRFTLV+PYCLEFVKWDIM
Sbjct: 1   MSADTVPPLIAAHINYLLNHFPLPVKIEHMWSGSRHYPGIMDRFTLVMPYCLEFVKWDIM 60

Query: 94  YDAESPFSAPDIVFGPEDENFHPFTSKVDEGEGYHDSLQNSLRDWNSKDPSRLTSLLQEL 153
           Y+AESPFSAPDI+FGPEDENFHPF+SKVDEGEG H+SLQNSLRDWNSKDPSRLTSLLQEL
Sbjct: 61  YNAESPFSAPDIMFGPEDENFHPFSSKVDEGEGDHNSLQNSLRDWNSKDPSRLTSLLQEL 120

Query: 154 RDRYASYQRKRVEGVEDERLKFELCTMLSREGIEMHLSSGVEKPEDVKFAVPLVDININK 213
           RDRY SYQRKRVEGV+DERLKFELCTMLSREGIEMHLSSGVEKPE+VKFAVPLVDININK
Sbjct: 121 RDRYVSYQRKRVEGVDDERLKFELCTMLSREGIEMHLSSGVEKPEEVKFAVPLVDININK 180

Query: 214 MIPGCPWRHPQKIFLQVLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM 273
           MIPGCPWRHPQKIFLQVLYPVVRKYA+TP+APRLKLVSTSELKALLSIEDIKLPSWIDGM
Sbjct: 181 MIPGCPWRHPQKIFLQVLYPVVRKYATTPSAPRLKLVSTSELKALLSIEDIKLPSWIDGM 240

Query: 274 CMAEYLPHLEESLEKQVLDAVSLINVRRRFIEALNSFFGRPLEADPVFCRTATVIAASGV 333
           CMAEYLPHLEESLEKQVL+AVSLI+VRR FIEAL++FFGRPLEADPVFCRTATVI ASGV
Sbjct: 241 CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALDNFFGRPLEADPVFCRTATVITASGV 300

Query: 334 FTFLVHFLMSTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERVFE 393
           FTFLVH L+STQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAER+FE
Sbjct: 301 FTFLVHILISTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERIFE 360

Query: 394 FLADEALSFKRYCNEAQLQ 413
           FLADEALSFKRYCNEAQLQ
Sbjct: 361 FLADEALSFKRYCNEAQLQ 379

[Close]

BLAST of CmaCh01G019760 vs. ExPASy TrEMBL
Match: A0A1S3CSN0 (BRCA1-A complex subunit BRE OS=Cucumis melo OX=3656 GN=LOC103503876 PE=4 SV=1)

HSP 1 Score: 728.8 bits (1880), Expect = 1.3e-206
Identity = 352/379 (92.88%), Postives = 371/379 (97.89%), Query Frame = 0


Query: 34  MSSDTVPPLIAAQINYLRNHFPLPLMIENMWSGSRHYPGIIDRFTLVIPYCLEFVKWDIM 93
           MS+DTVPPLIAA INYL NHFPLP+ IE+MWSGSRHYPGI+DRFTLV+PYCLEFVKWDIM
Sbjct: 1   MSADTVPPLIAAHINYLLNHFPLPVKIEHMWSGSRHYPGIMDRFTLVMPYCLEFVKWDIM 60

Query: 94  YDAESPFSAPDIVFGPEDENFHPFTSKVDEGEGYHDSLQNSLRDWNSKDPSRLTSLLQEL 153
           Y+AESPFSAPDI+FGPEDENFHPF+SKVDEGEG H+SLQNSLRDWNSKDPSRLTSLLQEL
Sbjct: 61  YNAESPFSAPDIMFGPEDENFHPFSSKVDEGEGDHNSLQNSLRDWNSKDPSRLTSLLQEL 120

Query: 154 RDRYASYQRKRVEGVEDERLKFELCTMLSREGIEMHLSSGVEKPEDVKFAVPLVDININK 213
           RDRY SYQRKRVEGV+DERLKFELCTMLSREGIEMHLSSGVEKPE+VKFAVPLVDININK
Sbjct: 121 RDRYVSYQRKRVEGVDDERLKFELCTMLSREGIEMHLSSGVEKPEEVKFAVPLVDININK 180

Query: 214 MIPGCPWRHPQKIFLQVLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM 273
           MIPGCPWRHPQKIFLQVLYPVVRKYA+TP+APRLKLVSTSELKALLSIEDIKLPSWIDGM
Sbjct: 181 MIPGCPWRHPQKIFLQVLYPVVRKYATTPSAPRLKLVSTSELKALLSIEDIKLPSWIDGM 240

Query: 274 CMAEYLPHLEESLEKQVLDAVSLINVRRRFIEALNSFFGRPLEADPVFCRTATVIAASGV 333
           CMAEYLPHLEESLEKQVL+AVSLI+VRR FIEAL++FFGRPLEADPVFCRTATVI ASGV
Sbjct: 241 CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALDNFFGRPLEADPVFCRTATVITASGV 300

Query: 334 FTFLVHFLMSTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERVFE 393
           FTFLVH L+STQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAER+FE
Sbjct: 301 FTFLVHILISTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERIFE 360

Query: 394 FLADEALSFKRYCNEAQLQ 413
           FLADEALSFKRYCNEAQLQ
Sbjct: 361 FLADEALSFKRYCNEAQLQ 379

[Close]

BLAST of CmaCh01G019760 vs. NCBI nr
Match: XP_022981789.1 (BRISC and BRCA1-A complex member 2-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 774.2 bits (1998), Expect = 5.5e-220
Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 0


Query: 34  MSSDTVPPLIAAQINYLRNHFPLPLMIENMWSGSRHYPGIIDRFTLVIPYCLEFVKWDIM 93
           MSSDTVPPLIAAQINYLRNHFPLPLMIENMWSGSRHYPGIIDRFTLVIPYCLEFVKWDIM
Sbjct: 1   MSSDTVPPLIAAQINYLRNHFPLPLMIENMWSGSRHYPGIIDRFTLVIPYCLEFVKWDIM 60

Query: 94  YDAESPFSAPDIVFGPEDENFHPFTSKVDEGEGYHDSLQNSLRDWNSKDPSRLTSLLQEL 153
           YDAESPFSAPDIVFGPEDENFHPFTSKVDEGEGYHDSLQNSLRDWNSKDPSRLTSLLQEL
Sbjct: 61  YDAESPFSAPDIVFGPEDENFHPFTSKVDEGEGYHDSLQNSLRDWNSKDPSRLTSLLQEL 120

Query: 154 RDRYASYQRKRVEGVEDERLKFELCTMLSREGIEMHLSSGVEKPEDVKFAVPLVDININK 213
           RDRYASYQRKRVEGVEDERLKFELCTMLSREGIEMHLSSGVEKPEDVKFAVPLVDININK
Sbjct: 121 RDRYASYQRKRVEGVEDERLKFELCTMLSREGIEMHLSSGVEKPEDVKFAVPLVDININK 180

Query: 214 MIPGCPWRHPQKIFLQVLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM 273
           MIPGCPWRHPQKIFLQVLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM
Sbjct: 181 MIPGCPWRHPQKIFLQVLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM 240

Query: 274 CMAEYLPHLEESLEKQVLDAVSLINVRRRFIEALNSFFGRPLEADPVFCRTATVIAASGV 333
           CMAEYLPHLEESLEKQVLDAVSLINVRRRFIEALNSFFGRPLEADPVFCRTATVIAASGV
Sbjct: 241 CMAEYLPHLEESLEKQVLDAVSLINVRRRFIEALNSFFGRPLEADPVFCRTATVIAASGV 300

Query: 334 FTFLVHFLMSTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERVFE 393
           FTFLVHFLMSTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERVFE
Sbjct: 301 FTFLVHFLMSTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERVFE 360

Query: 394 FLADEALSFKRYCNEAQLQ 413
           FLADEALSFKRYCNEAQLQ
Sbjct: 361 FLADEALSFKRYCNEAQLQ 379

[Close]

BLAST of CmaCh01G019760 vs. NCBI nr
Match: XP_022940533.1 (BRISC and BRCA1-A complex member 2-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 766.1 bits (1977), Expect = 1.5e-217
Identity = 374/379 (98.68%), Postives = 377/379 (99.47%), Query Frame = 0


Query: 34  MSSDTVPPLIAAQINYLRNHFPLPLMIENMWSGSRHYPGIIDRFTLVIPYCLEFVKWDIM 93
           MSSDTVPPLIAAQINYLRNHFPLPLMIENMWSGSRHYPGIIDRFTLVIPYCLEFVKWDIM
Sbjct: 1   MSSDTVPPLIAAQINYLRNHFPLPLMIENMWSGSRHYPGIIDRFTLVIPYCLEFVKWDIM 60

Query: 94  YDAESPFSAPDIVFGPEDENFHPFTSKVDEGEGYHDSLQNSLRDWNSKDPSRLTSLLQEL 153
           YDAESPFSAPDI+FGPEDENFHPFTSKVDEGEGYHDSLQNSLRDWNSKDPSRLTSLLQEL
Sbjct: 61  YDAESPFSAPDIMFGPEDENFHPFTSKVDEGEGYHDSLQNSLRDWNSKDPSRLTSLLQEL 120

Query: 154 RDRYASYQRKRVEGVEDERLKFELCTMLSREGIEMHLSSGVEKPEDVKFAVPLVDININK 213
           RDRYASYQRKRVEGVEDERLKFELCTMLSREGIEMHLSSGVEKPEDVKFAVPLVDININK
Sbjct: 121 RDRYASYQRKRVEGVEDERLKFELCTMLSREGIEMHLSSGVEKPEDVKFAVPLVDININK 180

Query: 214 MIPGCPWRHPQKIFLQVLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM 273
           MIPGCPWRHPQKIFLQVLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM
Sbjct: 181 MIPGCPWRHPQKIFLQVLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM 240

Query: 274 CMAEYLPHLEESLEKQVLDAVSLINVRRRFIEALNSFFGRPLEADPVFCRTATVIAASGV 333
           CMAEYLPHLEESLEKQVL+AVSLINVRR FIEAL SFFGRPLEADPVFCRTATVIAASGV
Sbjct: 241 CMAEYLPHLEESLEKQVLEAVSLINVRRGFIEALGSFFGRPLEADPVFCRTATVIAASGV 300

Query: 334 FTFLVHFLMSTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERVFE 393
           FTFLVHFLMSTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAER+FE
Sbjct: 301 FTFLVHFLMSTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERIFE 360

Query: 394 FLADEALSFKRYCNEAQLQ 413
           FLADEALSFKRYCNEAQLQ
Sbjct: 361 FLADEALSFKRYCNEAQLQ 379

[Close]

BLAST of CmaCh01G019760 vs. NCBI nr
Match: KAG6608599.1 (BRISC and BRCA1-A complex member 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 765.4 bits (1975), Expect = 2.5e-217
Identity = 373/379 (98.42%), Postives = 378/379 (99.74%), Query Frame = 0


Query: 34  MSSDTVPPLIAAQINYLRNHFPLPLMIENMWSGSRHYPGIIDRFTLVIPYCLEFVKWDIM 93
           MSSDTVPPLIAAQINYLRNHFPLPLMIENMWSGSRHYPGIIDRFTLVIPYCLEFVKWDIM
Sbjct: 1   MSSDTVPPLIAAQINYLRNHFPLPLMIENMWSGSRHYPGIIDRFTLVIPYCLEFVKWDIM 60

Query: 94  YDAESPFSAPDIVFGPEDENFHPFTSKVDEGEGYHDSLQNSLRDWNSKDPSRLTSLLQEL 153
           YDAESPFSAPDI+FGPEDENFHPFTSKVDEGEGYHDSLQNSLRDWNSKDPSRLTSLLQEL
Sbjct: 61  YDAESPFSAPDIMFGPEDENFHPFTSKVDEGEGYHDSLQNSLRDWNSKDPSRLTSLLQEL 120

Query: 154 RDRYASYQRKRVEGVEDERLKFELCTMLSREGIEMHLSSGVEKPEDVKFAVPLVDININK 213
           RDRYASYQRKRVEGVEDERLKFELCTMLSREGIEMHL+SGVEKPEDVKFAVPLVDININK
Sbjct: 121 RDRYASYQRKRVEGVEDERLKFELCTMLSREGIEMHLNSGVEKPEDVKFAVPLVDININK 180

Query: 214 MIPGCPWRHPQKIFLQVLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM 273
           MIPGCPWRHPQKIFLQVLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM
Sbjct: 181 MIPGCPWRHPQKIFLQVLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM 240

Query: 274 CMAEYLPHLEESLEKQVLDAVSLINVRRRFIEALNSFFGRPLEADPVFCRTATVIAASGV 333
           CMAEYLPHLEESLEKQVL+AVSLINVRR FIEAL+SFFGRPLEADPVFCRTATVIAASGV
Sbjct: 241 CMAEYLPHLEESLEKQVLEAVSLINVRRGFIEALDSFFGRPLEADPVFCRTATVIAASGV 300

Query: 334 FTFLVHFLMSTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERVFE 393
           FTFLVHFLMSTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAER+FE
Sbjct: 301 FTFLVHFLMSTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERIFE 360

Query: 394 FLADEALSFKRYCNEAQLQ 413
           FLADEALSFKRYCNEAQLQ
Sbjct: 361 FLADEALSFKRYCNEAQLQ 379

[Close]

BLAST of CmaCh01G019760 vs. NCBI nr
Match: XP_023525358.1 (BRISC and BRCA1-A complex member 2-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 765.0 bits (1974), Expect = 3.3e-217
Identity = 373/379 (98.42%), Postives = 378/379 (99.74%), Query Frame = 0


Query: 34  MSSDTVPPLIAAQINYLRNHFPLPLMIENMWSGSRHYPGIIDRFTLVIPYCLEFVKWDIM 93
           MSSDTVPPLIAAQINYLRNHFPLPLMIENMWSGSRHYPGIIDRFTLVIPYCLEFVKWDIM
Sbjct: 1   MSSDTVPPLIAAQINYLRNHFPLPLMIENMWSGSRHYPGIIDRFTLVIPYCLEFVKWDIM 60

Query: 94  YDAESPFSAPDIVFGPEDENFHPFTSKVDEGEGYHDSLQNSLRDWNSKDPSRLTSLLQEL 153
           YDAESPFSAPDI+FGPEDENFHPFTSKVDEGEGYHDSLQNSLRDWNSKDPSRLTSLLQEL
Sbjct: 61  YDAESPFSAPDIMFGPEDENFHPFTSKVDEGEGYHDSLQNSLRDWNSKDPSRLTSLLQEL 120

Query: 154 RDRYASYQRKRVEGVEDERLKFELCTMLSREGIEMHLSSGVEKPEDVKFAVPLVDININK 213
           RDRYASYQRKRVEGVEDERLKFELCTMLSREGIEMHLSSGVEKPE+VKFAVPLVDININK
Sbjct: 121 RDRYASYQRKRVEGVEDERLKFELCTMLSREGIEMHLSSGVEKPEEVKFAVPLVDININK 180

Query: 214 MIPGCPWRHPQKIFLQVLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM 273
           MIPGCPWRHPQKIFLQVLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM
Sbjct: 181 MIPGCPWRHPQKIFLQVLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM 240

Query: 274 CMAEYLPHLEESLEKQVLDAVSLINVRRRFIEALNSFFGRPLEADPVFCRTATVIAASGV 333
           CMAEYLPHLEESLEKQVL+AVSLINVRR FIEAL+SFFGRPLEADPVFCRTATVIAASGV
Sbjct: 241 CMAEYLPHLEESLEKQVLEAVSLINVRRGFIEALDSFFGRPLEADPVFCRTATVIAASGV 300

Query: 334 FTFLVHFLMSTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERVFE 393
           FTFLVHFLMSTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAER+FE
Sbjct: 301 FTFLVHFLMSTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERIFE 360

Query: 394 FLADEALSFKRYCNEAQLQ 413
           FLADEALSFKRYCNEAQLQ
Sbjct: 361 FLADEALSFKRYCNEAQLQ 379

[Close]

BLAST of CmaCh01G019760 vs. NCBI nr
Match: XP_004136379.1 (BRISC and BRCA1-A complex member 2 isoform X1 [Cucumis sativus] >KGN60040.1 hypothetical protein Csa_001828 [Cucumis sativus])

HSP 1 Score: 730.3 bits (1884), Expect = 9.1e-207
Identity = 353/379 (93.14%), Postives = 370/379 (97.63%), Query Frame = 0


Query: 34  MSSDTVPPLIAAQINYLRNHFPLPLMIENMWSGSRHYPGIIDRFTLVIPYCLEFVKWDIM 93
           MSSDTVPP+IAA INYL NHFPLP+ IE+MWSGSRHYPGI+DRFTLV+PYCLEFVKWDIM
Sbjct: 1   MSSDTVPPIIAAHINYLLNHFPLPVKIEHMWSGSRHYPGIMDRFTLVMPYCLEFVKWDIM 60

Query: 94  YDAESPFSAPDIVFGPEDENFHPFTSKVDEGEGYHDSLQNSLRDWNSKDPSRLTSLLQEL 153
           Y+AESPFSAPDIVFGPEDENFHPF+SKVDEGEG H+SL NSLRDWNSKDPSRLTSLLQEL
Sbjct: 61  YNAESPFSAPDIVFGPEDENFHPFSSKVDEGEGDHNSLHNSLRDWNSKDPSRLTSLLQEL 120

Query: 154 RDRYASYQRKRVEGVEDERLKFELCTMLSREGIEMHLSSGVEKPEDVKFAVPLVDININK 213
           RDRY SYQRKRVEGV+DERLKFELCTMLSREGIEMHLSSGVEKPE+VKFAVPLVDININK
Sbjct: 121 RDRYVSYQRKRVEGVDDERLKFELCTMLSREGIEMHLSSGVEKPEEVKFAVPLVDININK 180

Query: 214 MIPGCPWRHPQKIFLQVLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM 273
           MIPGCPWRHPQKIFLQVLYPVVRKYA+TP+APRLKLVSTSELKALLSIEDIKLP+WIDGM
Sbjct: 181 MIPGCPWRHPQKIFLQVLYPVVRKYATTPSAPRLKLVSTSELKALLSIEDIKLPTWIDGM 240

Query: 274 CMAEYLPHLEESLEKQVLDAVSLINVRRRFIEALNSFFGRPLEADPVFCRTATVIAASGV 333
           CMAEYLPHLEESLEKQVL+AVSLI+VRR FIEALNSFFGRPLEADPVFCRTATVI ASGV
Sbjct: 241 CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALNSFFGRPLEADPVFCRTATVITASGV 300

Query: 334 FTFLVHFLMSTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERVFE 393
           FTFLVH L+STQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAER+FE
Sbjct: 301 FTFLVHILISTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERIFE 360

Query: 394 FLADEALSFKRYCNEAQLQ 413
           FLADEALSFKRYCNEAQLQ
Sbjct: 361 FLADEALSFKRYCNEAQLQ 379

[Close]

BLAST of CmaCh01G019760 vs. TAIR 10
Match: AT5G42470.1 (CONTAINS InterPro DOMAIN/s: Brain/reproductive organ-expressed protein (InterPro:IPR010358); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 483.4 bits (1243), Expect = 1.8e-136
Identity = 225/381 (59.06%), Postives = 302/381 (79.27%), Query Frame = 0


Query: 34  MSSDTVPPLIAAQINYLRNHFPLPLMIENMWSGSRHYPGIIDRFTLVIPYCLEFVKWDIM 93
           M+ +  PPLIA Q++YL NH P  + I N+WSG++  P I+DRFTLVIPYCLE +KWD++
Sbjct: 1   MAFEEFPPLIADQLHYLLNHSPDSIKIANVWSGNKINPKILDRFTLVIPYCLETIKWDVI 60

Query: 94  YDAESPFSAPDIVFGPEDENFHPF-TSKVDEGEGYHDSLQNSLRDWNSKDPSRLTSLLQE 153
           Y++E     PD VFGP+DE+F P   S +   +    SL+ +L +W+ +D +RL  ++Q 
Sbjct: 61  YNSEYAMDPPDFVFGPDDEDFVPCKCSAIAPDDDQISSLEKALSEWDHEDSTRLLVIIQG 120

Query: 154 LRDRYASYQRKRVEGVEDERLKFELCTMLSREGIEMHLSSGVEKPEDVKFAVPLV-DINI 213
           LRD+Y +YQR+RV  V+D+R+KFE+ T+L+R+GIEM ++SGV+KPE+VKFAVPLV D+NI
Sbjct: 121 LRDQYVAYQRRRVGQVDDDRVKFEISTVLTRKGIEMQMASGVDKPEEVKFAVPLVMDMNI 180

Query: 214 NKMIPGCPWRHPQKIFLQVLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWID 273
           NKM+ GCPW+H QKI+LQV+YP++RKY + P+APRLKLVS  +LK+L S+ED+KL  W+D
Sbjct: 181 NKMVVGCPWKHQQKIYLQVVYPILRKYEAAPSAPRLKLVSYYDLKSLFSVEDVKLSPWMD 240

Query: 274 GMCMAEYLPHLEESLEKQVLDAVSLINVRRRFIEALNSFFGRPLEADPVFCRTATVIAAS 333
           GMC+AEYLPHLEE+LE+Q+ +AV+ I++RR FIEAL+   GRPLEADP FCR AT + AS
Sbjct: 241 GMCLAEYLPHLEETLERQIHEAVAAIDLRRSFIEALSLNLGRPLEADPTFCRKATFLNAS 300

Query: 334 GVFTFLVHFLMSTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERV 393
           G FTF+VHF  STQFPK+QP+L+LQS QH N    P+KS L+T+YPWSPRWE  +MAER+
Sbjct: 301 GQFTFMVHFFFSTQFPKQQPTLMLQSCQHLNQSSVPVKSNLLTEYPWSPRWEVGRMAERL 360

Query: 394 FEFLADEALSFKRYCNEAQLQ 413
            +FL DEA++FK+YCNEA LQ
Sbjct: 361 CDFLTDEAVNFKKYCNEALLQ 381

The following BLAST results are available for this feature:

BLAST of CmaCh01G019760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B6NXD5	1.3e-27	26.71	BRISC and BRCA1-A complex member 2 OS=Branchiostoma floridae OX=7739 GN=BABAM2 P...	[more]
Q568D5	1.1e-26	30.42	BRISC and BRCA1-A complex member 2 OS=Danio rerio OX=7955 GN=babam2 PE=2 SV=1	[more]
Q6DJ78	1.5e-26	30.12	BRISC and BRCA1-A complex member 2 OS=Xenopus tropicalis OX=8364 GN=babam2 PE=2 ...	[more]
Q6SP92	4.3e-26	30.77	BRISC and BRCA1-A complex member 2 OS=Mesocricetus auratus OX=10036 GN=Babam2 PE...	[more]
Q6GPL9	7.3e-26	30.03	BRISC and BRCA1-A complex member 2 OS=Xenopus laevis OX=8355 GN=babam2 PE=2 SV=1	[more]

BLAST of CmaCh01G019760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J2U1	2.6e-220	100.00	BRCA1-A complex subunit BRE OS=Cucurbita maxima OX=3661 GN=LOC111480831 PE=4 SV=...	[more]
A0A6J1FPK2	7.2e-218	98.68	BRCA1-A complex subunit BRE OS=Cucurbita moschata OX=3662 GN=LOC111446103 PE=4 S...	[more]
A0A0A0LDL1	4.4e-207	93.14	BRCA1-A complex subunit BRE OS=Cucumis sativus OX=3659 GN=Csa_3G872710 PE=4 SV=1	[more]
A0A5D3E738	1.3e-206	92.88	BRCA1-A complex subunit BRE OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3CSN0	1.3e-206	92.88	BRCA1-A complex subunit BRE OS=Cucumis melo OX=3656 GN=LOC103503876 PE=4 SV=1	[more]

BLAST of CmaCh01G019760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022981789.1	5.5e-220	100.00	BRISC and BRCA1-A complex member 2-like isoform X1 [Cucurbita maxima]	[more]
XP_022940533.1	1.5e-217	98.68	BRISC and BRCA1-A complex member 2-like isoform X1 [Cucurbita moschata]	[more]
KAG6608599.1	2.5e-217	98.42	BRISC and BRCA1-A complex member 2, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_023525358.1	3.3e-217	98.42	BRISC and BRCA1-A complex member 2-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_004136379.1	9.1e-207	93.14	BRISC and BRCA1-A complex member 2 isoform X1 [Cucumis sativus] >KGN60040.1 hypo...	[more]

BLAST of CmaCh01G019760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42470.1	1.8e-136	59.06	CONTAINS InterPro DOMAIN/s: Brain/reproductive organ-expressed protein (InterPro...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010358	BRCA1-A complex subunit BRE	PFAM	PF06113	BRE	coord: 60..361 e-value: 3.6E-35 score: 121.3
IPR010358	BRCA1-A complex subunit BRE	PANTHER	PTHR15189	BRISC AND BRCA1-A COMPLEX MEMBER 2	coord: 35..411

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G019760.1	CmaCh01G019760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006302	double-strand break repair
cellular_component	GO:0070531	BRCA1-A complex
cellular_component	GO:0070552	BRISC complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane