CmaCh01G015960 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh01G015960
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	rhomboid-like protein 11, chloroplastic
Location	Cma_Chr01: 11023565 .. 11027004 (-)
RNA-Seq Expression	CmaCh01G015960
Synteny	CmaCh01G015960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGCGGAGCTGCTCTGAAATCCCCGACTGAACGATGCAATCGCGGTTGCAGCAGCTCCATGGGAGCCGAATATTGAAACCTCGTGGACTACGCGAGCAAATGGCTACGACTTCCATTGCTCATCTCTCAAGATTCAGCTCAAGCTCACTCAGATTCTCCTCTCCATTATTTCACCCGCTCTCATCGTCTATTTCGGTTGCTCAATTTAGCAATGTTCTTCGTCTTCGCGCTCGTTCCACTGCTGCGAAACCTATAGCGATGTGCAAAATGAACGATGCAGGTTGTTCTTTTTCTTTTTTGTTCTTCTGCGTTATTTTCAACCATTTATCTTTTGATTTATGAGTTTATTGTGGAATTTTCGCTGAATTAGAAGGGGATATTGTGATTTTTATTGATGAATATGCGTGCGGTTGAATGAAAGTAAAGAAGAATTTTGTTTTTAAATGTTTGTTAGATTTGATATCACAGTTGGAGCTAGGGAAACCACTGCAGAATCGGAAACCGGAGAAGCGTGTTAATGGTATATTCTGGATCATTCTTCTCAACATTGGAGTATATGTGGCCGATCACATTTTTCAGGTACGAGTTCTGTTACCACATGCTATCAAGTCTAATGCTATTTGCCTATAGAGATTGGGAAAGAAAGAGCCCCAAAATATTGCCCGGAAGTTGAGGAATACTGAATGAACCATTTGTCAAAGCTGATTGTTATAGGGCATTAATAGGTTAATCCACTCGTAAGCAGATTATTAACAGTAAACCGTTTTATTAGGGAATATGAAAATATACGTTCTAAAAGCATCAGAGTCATAGCAGTCAACTTAGCTAGTAAAAAACTTGATTCTCGAGTTGAAGCAACTCAAAAGCTTAAGTTGATGGGTGATGGTAACTTTAATTATATTAACCTTTTAACATTCTCCTTGTTTATGGGCTTGAAACTTTGTAATATGCTCAACAAGTAGAATCAATATTACTTGGAGAGTAGAGAATGGTAGGGTTTTTTTTTTTTTTTTTAAATTTTGTGATAAGGAATCAACCAAGAGGAAAGCTCTTATACCAAATGATAAGGAATCAACCCAAACCCAAGAGAAAGCTCTAATACAAAATGCTAAGGAATCACTGTAAGGAAAGTAAGATTCGGATTACCTTGTTGATCAAATATATTAATGCAAGAACACTTGTTTGAGATTTGAATCACTCCAGAAGTAAAATTGATCATGTCAAACTTGAATGATTCTATATGCAACCTAAACTATATAGAATTGCAAAGAAACTTGGCCTTTGGCAAAAGGAAAGCACAAATGCTCTTTTTACTACCTTTTTCAAGTCTTCTTTGCAAAGATAACATATATAGCCTCTAAATGAAAACTCTTAACATTCTAGGAGGTGTTCCTAGAGTTTAATTTTCATACTTTATGACCATAATTAGCCACTACGTAAATAGGCCTTAAAATACATTAAAAAAAAACACCATAACTCTAAATTACCATTCACCCAAAATTTGTAGCCATCCAAGAATAAATGGAGCTTGATTCTTCTTTAATGTGGTATGAATTGCAACATCTTGTGATAATTTGAACAACATTTTTTTCACATATTTCTTAAAGTTTATCTTGTTTGATTGATGTCTTGGTTCATATCACTTCGTTATTCAAATACCAAGTTGCCTGTACTCAATTACTAAATTCTCTTTTTCATAGGTTCGTAGTATAGGAAATCTGTACCTGTACCACAATCGTCCTGCATGGTATCAATTTTTTACAGCAACATTTTGTCATGCTAATTGGTGAGTTTTTGGGCTCTTCAAAATCATGCAAATTTTACATTTCTCGTCGGATCGATGGAAGTTAGAAGCTTGTTATCTTCTCATGAGAATGCAATTTTCCGGTTTTACAAGCATGACTTAGTGGAATACTTACTATTTCCATGAATGTTTTGCAGGAACCATCTCTCTAGCAATCTTTTTTTCTTGTATATATTTGGTGAGACCCACACTTGACTTCCCTCCCCTCCCCTCCAAGAAAATGAATGTTCTAATGTATGGATTTCTACTTTATTTCTTGGAGGTGGAAGCCATAAAATAACACCCTAATGTTCTGACATTTAATAGTTCCATTATTTGTGATGAACAGGAAAACTTGTTGAGGAAGAGGAAGGAAACTTTGCTTTGTGGCTTTCCTATATTCTTACTGGTGTAGGTGCAAACATTGTTTCATGGCTAATTTTACCAAGAAATGCTGTATCAGTTGGAGCTTCTGGTGCTGTTTTTGGGTTGTTTACTATAAGTGTCCTTGTAAAGGTATCTATCTAAAACTTGTGATTTATCACTCTCATTTCGGTTTCAATACACTTCAACTAAGAAATTCTTTCGTGGCAGATGTCTTGGGATTGGAGGAAGATCCTCGAAGTCCTTATACTTGGTCAATTCGTTATAGAGAAGGTACTGCATTCTCTTTTTACTCCCATGTGAACGATCTTAAACTACTGACAAGCAACTTTCCTAAATAGGAATGCATGTAACCGTCTAAGCTCACTACTAGCAGATATGGTTCCCTTTTTACTTTTCCTTTCGGGTTTTCCCTCAAGGTTTTTAAAACGCCGTCTGTTAGGAAGAGGTTTTCATATCCTTACAAAAAATGTTTTGTTCTCCTCCCCAACCGATGTGGGATCTCACAATGCATGACTACACTATCTATTATTTAATAGATCCGACAAGTAAAAATATAGATATTGTCAATCTAAGTATAGTTCGACTGATTTAGGTTTATATCCTTGACTAAGGGGTCATAAGTTTGAATCATCTAACTTTCCCGGGGTCATAAGTTTGAATCATCTAACTTTCCCAGGTTGTTCAACTGAGTTGTCCTTGAAATAGAATCTATTTCAAGTGTCTTTCCCTTATCTTTTATTTCTAAAAGCATAAATCTTGTTTTTTATTTGAATCTCTGGTTGGTTTGTGTAAAAGATAAGGTGAGGGAAACTTGCTTATCCATATGCTTTGCTTGGTCACTATAGGTCATGGAAGCAGCCCAAGCTTCAACTGCATTGTCAGGAAGCTTCCGCGGAGGATCTGCCTTGCAGAATGTTAACCATGTTGCTCATCTCTCTGGGGCGCTCGTCGGTGTCGTTCTAGTATGGCTTCTCAGTAGAATTCCTTCTCAACCTCCTGATCAAGATGCATCAACTTTGCACAGGAAAGTAAGATGATTGCACAAGCAATTCTGCTTTGAAATAGAACAATATACTCTGCCATTCTCTTCTTGTTTTGTTCTCATTTAGGAAACAGTATCCATTCATCTTCCTATTTGTATCTTGTGTAAAATATTTTATATAGGATTGTGGTTATAGGTTTGCAAGTGCTAAAGTAATATTGGCATGGATGGAACGAATTTTCTTGACAACTAAATGTAATAGCAAGACGATTTACTAATAGATCGACA

mRNA sequence

CAGCGGAGCTGCTCTGAAATCCCCGACTGAACGATGCAATCGCGGTTGCAGCAGCTCCATGGGAGCCGAATATTGAAACCTCGTGGACTACGCGAGCAAATGGCTACGACTTCCATTGCTCATCTCTCAAGATTCAGCTCAAGCTCACTCAGATTCTCCTCTCCATTATTTCACCCGCTCTCATCGTCTATTTCGGTTGCTCAATTTAGCAATGTTCTTCGTCTTCGCGCTCGTTCCACTGCTGCGAAACCTATAGCGATGTGCAAAATGAACGATGCAGATTTGATATCACAGTTGGAGCTAGGGAAACCACTGCAGAATCGGAAACCGGAGAAGCGTGTTAATGGTATATTCTGGATCATTCTTCTCAACATTGGAGTATATGTGGCCGATCACATTTTTCAGGTTCGTAGTATAGGAAATCTGTACCTGTACCACAATCGTCCTGCATGGTATCAATTTTTTACAGCAACATTTTGTCATGCTAATTGGAACCATCTCTCTAGCAATCTTTTTTTCTTGTATATATTTGGAAAACTTGTTGAGGAAGAGGAAGGAAACTTTGCTTTGTGGCTTTCCTATATTCTTACTGGTGTAGGTGCAAACATTGTTTCATGGCTAATTTTACCAAGAAATGCTGTATCAGTTGGAGCTTCTGGTGCTGTTTTTGGGTTGTTTACTATAAGTGTCCTTGTAAAGATGTCTTGGGATTGGAGGAAGATCCTCGAAGTCCTTATACTTGGTCAATTCGTTATAGAGAAGGTCATGGAAGCAGCCCAAGCTTCAACTGCATTGTCAGGAAGCTTCCGCGGAGGATCTGCCTTGCAGAATGTTAACCATGTTGCTCATCTCTCTGGGGCGCTCGTCGGTGTCGTTCTAGTATGGCTTCTCAGTAGAATTCCTTCTCAACCTCCTGATCAAGATGCATCAACTTTGCACAGGAAAGTAAGATGATTGCACAAGCAATTCTGCTTTGAAATAGAACAATATACTCTGCCATTCTCTTCTTGTTTTGTTCTCATTTAGGAAACAGTATCCATTCATCTTCCTATTTGTATCTTGTGTAAAATATTTTATATAGGATTGTGGTTATAGGTTTGCAAGTGCTAAAGTAATATTGGCATGGATGGAACGAATTTTCTTGACAACTAAATGTAATAGCAAGACGATTTACTAATAGATCGACA

Coding sequence (CDS)

ATGCAATCGCGGTTGCAGCAGCTCCATGGGAGCCGAATATTGAAACCTCGTGGACTACGCGAGCAAATGGCTACGACTTCCATTGCTCATCTCTCAAGATTCAGCTCAAGCTCACTCAGATTCTCCTCTCCATTATTTCACCCGCTCTCATCGTCTATTTCGGTTGCTCAATTTAGCAATGTTCTTCGTCTTCGCGCTCGTTCCACTGCTGCGAAACCTATAGCGATGTGCAAAATGAACGATGCAGATTTGATATCACAGTTGGAGCTAGGGAAACCACTGCAGAATCGGAAACCGGAGAAGCGTGTTAATGGTATATTCTGGATCATTCTTCTCAACATTGGAGTATATGTGGCCGATCACATTTTTCAGGTTCGTAGTATAGGAAATCTGTACCTGTACCACAATCGTCCTGCATGGTATCAATTTTTTACAGCAACATTTTGTCATGCTAATTGGAACCATCTCTCTAGCAATCTTTTTTTCTTGTATATATTTGGAAAACTTGTTGAGGAAGAGGAAGGAAACTTTGCTTTGTGGCTTTCCTATATTCTTACTGGTGTAGGTGCAAACATTGTTTCATGGCTAATTTTACCAAGAAATGCTGTATCAGTTGGAGCTTCTGGTGCTGTTTTTGGGTTGTTTACTATAAGTGTCCTTGTAAAGATGTCTTGGGATTGGAGGAAGATCCTCGAAGTCCTTATACTTGGTCAATTCGTTATAGAGAAGGTCATGGAAGCAGCCCAAGCTTCAACTGCATTGTCAGGAAGCTTCCGCGGAGGATCTGCCTTGCAGAATGTTAACCATGTTGCTCATCTCTCTGGGGCGCTCGTCGGTGTCGTTCTAGTATGGCTTCTCAGTAGAATTCCTTCTCAACCTCCTGATCAAGATGCATCAACTTTGCACAGGAAAGTAAGATGA

Protein sequence

MQSRLQQLHGSRILKPRGLREQMATTSIAHLSRFSSSSLRFSSPLFHPLSSSISVAQFSNVLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVADHIFQVRSIGNLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQDASTLHRKVR

Homology

[Close]

BLAST of CmaCh01G015960 vs. ExPASy Swiss-Prot
Match: Q84MB5 (Rhomboid-like protein 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL11 PE=1 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 3.0e-101
Identity = 192/281 (68.33%), Postives = 217/281 (77.22%), Query Frame = 0


Query: 26  TSIAHLSRFS--SSSLRFSSPLFH-------PLSSSISVAQFSNVLRLRARSTAAKPIAM 85
           + + HL R S   SSLRF  P  H       P +S+    QF  +   R++ T       
Sbjct: 2   SQLLHLHRLSLPQSSLRFRFPPLHRRRAASSPTNSTQPPLQFRPLTVSRSQIT------- 61

Query: 86  CKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVADHIFQVRSIGNLYLYHN 145
           C+ + +D+  Q EL K   NRKP+KR NGIFWIIL+N+G+Y+ADH FQVR I +LYLYHN
Sbjct: 62  CRFSQSDITPQFELDKAKDNRKPQKRANGIFWIILINLGIYLADHFFQVRGIKSLYLYHN 121

Query: 146 RPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWL 205
            PAWYQF TATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF LWLSY+ TGVGAN+VSWL
Sbjct: 122 FPAWYQFVTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYLFTGVGANLVSWL 181

Query: 206 ILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSG 265
           +LPRNAVSVGASGAVFGLF ISVLVKMSWDWRKILEVLILGQFVIE+VMEAAQAS  LSG
Sbjct: 182 VLPRNAVSVGASGAVFGLFAISVLVKMSWDWRKILEVLILGQFVIERVMEAAQASAGLSG 241

Query: 266 SFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQD 298
           +  GG +LQ VNH+AHLSGALVGVVLVWLLS+ PS   DQD
Sbjct: 242 TIYGGYSLQTVNHIAHLSGALVGVVLVWLLSKFPSASMDQD 275

[Close]

BLAST of CmaCh01G015960 vs. ExPASy Swiss-Prot
Match: Q8VZ48 (RHOMBOID-like protein 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBL6 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.3e-06
Identity = 48/153 (31.37%), Postives = 80/153 (52.29%), Query Frame = 0


Query: 141 YQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPR 200
           ++  TA + HA   HL  N+F + IFG  +E++ G   + L Y+++G G +I+S L L +
Sbjct: 98  WRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFIRIGLIYLISGFGGSILSALFL-Q 157

Query: 201 NAVSVGASGAVFGLFTISVLVKMSWDW---RKILEVLILGQFVIEKVMEAAQASTALSGS 260
            ++SVGASGA+ GL   ++L ++  +W   +  L  L+   F+I     A   +  L   
Sbjct: 158 KSISVGASGALLGLMG-AMLSELLTNWTIYKSKLCALLSFLFII-----AINLAIGL--- 217

Query: 261 FRGGSALQNVNHVAHLSGALVGVVLVWLLSRIP 291
                 L  V++ AH+ G L G  L ++L   P
Sbjct: 218 ------LPWVDNFAHIGGLLTGFCLGFILLMQP 234

[Close]

BLAST of CmaCh01G015960 vs. ExPASy Swiss-Prot
Match: P96617 (Putative rhomboid protease YdcA OS=Bacillus subtilis (strain 168) OX=224308 GN=ydcA PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.4e-05
Identity = 40/146 (27.40%), Postives = 68/146 (46.58%), Query Frame = 0


Query: 140 WYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILP 199
           W++  T    HA + HL  N   +++F   +E   G     L Y  +G+  NI +++  P
Sbjct: 58  WWRLITPILLHAGFTHLLFNSMSIFLFAPALERMLGKARFLLVYAGSGIIGNIGTYVTEP 117

Query: 200 RNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFR 259
            + V VGASGA+FGLF + + +           VL   + + ++   +    T L+ +  
Sbjct: 118 LDYVHVGASGAIFGLFGVYLFM-----------VLFRNELIGQE--HSKMIITLLAFAVL 177

Query: 260 GGSALQNVNHVAHLSGALVGVVLVWL 286
                 N+N +AHL G   G +L +L
Sbjct: 178 MSFINSNINMMAHLFGLCGGFLLSFL 190

[Close]

BLAST of CmaCh01G015960 vs. ExPASy Swiss-Prot
Match: Q0WQX7 (RHOMBOID-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBL1 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 3.1e-05
Identity = 32/93 (34.41%), Postives = 53/93 (56.99%), Query Frame = 0


Query: 135 HNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVS 194
           H    W + FT  + HA   H+ +N+  L   G  +E+E G   + L Y+++G G +++S
Sbjct: 125 HKHEVW-RLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVRIGLLYMISGFGGSLLS 184

Query: 195 WLILPRNAVSVGASGAVFGLFTISVLVKMSWDW 228
            L   R  +SVGASGA+FGL   ++L ++  +W
Sbjct: 185 SL-FNRAGISVGASGALFGLLG-AMLSELLTNW 214

[Close]

BLAST of CmaCh01G015960 vs. ExPASy Swiss-Prot
Match: Q9CAN1 (RHOMBOID-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RBL2 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 6.9e-05
Identity = 46/155 (29.68%), Postives = 77/155 (49.68%), Query Frame = 0


Query: 135 HNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVS 194
           H    W +  +  + HA   HL +N+  L   G  +E++ G   + L Y+++G+G +I+S
Sbjct: 106 HEHQGW-RLLSCMWLHAGIIHLLTNMLSLIFIGIRLEQQFGFIRVGLIYLISGLGGSILS 165

Query: 195 WLILPRNAVSVGASGAVFGLFTISVLVKMSWDW---RKILEVLILGQFVIEKVMEAAQAS 254
            L L + ++SVGASGA+FGL   ++L ++  +W         LI   F+I         +
Sbjct: 166 SLFL-QESISVGASGALFGLLG-AMLSELLTNWTIYANKAAALITLLFII-------AIN 225

Query: 255 TALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLL 287
            AL         L  V++ AH+ G L G  L ++L
Sbjct: 226 LAL-------GMLPRVDNFAHIGGFLTGFCLGFVL 243

[Close]

BLAST of CmaCh01G015960 vs. ExPASy TrEMBL
Match: A0A6J1J179 (rhomboid-like protein 11, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111480404 PE=3 SV=1)

HSP 1 Score: 596.3 bits (1536), Expect = 7.3e-167
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 1   MQSRLQQLHGSRILKPRGLREQMATTSIAHLSRFSSSSLRFSSPLFHPLSSSISVAQFSN 60
           MQSRLQQLHGSRILKPRGLREQMATTSIAHLSRFSSSSLRFSSPLFHPLSSSISVAQFSN
Sbjct: 1   MQSRLQQLHGSRILKPRGLREQMATTSIAHLSRFSSSSLRFSSPLFHPLSSSISVAQFSN 60

Query: 61  VLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVAD 120
           VLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVAD
Sbjct: 61  VLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVAD 120

Query: 121 HIFQVRSIGNLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALW 180
           HIFQVRSIGNLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALW
Sbjct: 121 HIFQVRSIGNLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALW 180

Query: 181 LSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFV 240
           LSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFV
Sbjct: 181 LSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFV 240

Query: 241 IEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQDAST 300
           IEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQDAST
Sbjct: 241 IEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQDAST 300

Query: 301 LHRKVR 307
           LHRKVR
Sbjct: 301 LHRKVR 306

[Close]

BLAST of CmaCh01G015960 vs. ExPASy TrEMBL
Match: A0A6J1FQ99 (rhomboid-like protein 11, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111445986 PE=3 SV=1)

HSP 1 Score: 587.8 bits (1514), Expect = 2.6e-164
Identity = 303/307 (98.70%), Postives = 305/307 (99.35%), Query Frame = 0


Query: 1   MQSRLQQLHGSRILKPRGLREQMATTSIAHLSRFSSSSLRFSSPLFHPLSSSISVAQFSN 60
           MQSRLQQLHGSRILKPRGLREQMATTSIAHLSRFSSSSLRFSSPLFHPLS+S+SVAQFSN
Sbjct: 1   MQSRLQQLHGSRILKPRGLREQMATTSIAHLSRFSSSSLRFSSPLFHPLSASLSVAQFSN 60

Query: 61  VLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVAD 120
           VLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVAD
Sbjct: 61  VLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVAD 120

Query: 121 HIFQVRSIGNLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALW 180
           HIFQVRSIGNLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALW
Sbjct: 121 HIFQVRSIGNLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALW 180

Query: 181 LSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFV 240
           LSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFV
Sbjct: 181 LSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFV 240

Query: 241 IEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPP-DQDAS 300
           IEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGV LVWLLSRIPSQPP DQDAS
Sbjct: 241 IEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVFLVWLLSRIPSQPPDDQDAS 300

Query: 301 TLHRKVR 307
           TLHRKVR
Sbjct: 301 TLHRKVR 307

[Close]

BLAST of CmaCh01G015960 vs. ExPASy TrEMBL
Match: A0A6J1CNP9 (rhomboid-like protein 11, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012689 PE=3 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 7.6e-140
Identity = 263/306 (85.95%), Postives = 278/306 (90.85%), Query Frame = 0


Query: 1   MQSRLQQLHGSRILKPRGLREQMATTSIAHLSRFSSSSLRFSSPLFHPLSSSISVAQFSN 60
           M+    QLHG R+ KP GL +++   SI+ LS FSSSSLRF S LFHPLS S SVA+   
Sbjct: 1   MKQLQSQLHGFRLSKPCGLSKRIPMASISRLSSFSSSSLRFPSLLFHPLSLSHSVARLPY 60

Query: 61  VLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVAD 120
           VLRLRARS AAKP++MCKMND+DLISQLELGKP+Q+RKPEKRVNGIFWIILLNIG+YVAD
Sbjct: 61  VLRLRARSVAAKPVSMCKMNDSDLISQLELGKPVQSRKPEKRVNGIFWIILLNIGIYVAD 120

Query: 121 HIFQVRSIGNLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALW 180
           HIFQVR IG LYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALW
Sbjct: 121 HIFQVRGIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALW 180

Query: 181 LSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFV 240
           LSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFV
Sbjct: 181 LSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFV 240

Query: 241 IEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQDAST 300
           IEKVMEAAQASTALSGSFRGG +LQNVNHVAHLSGALVGVVLVWLLSRIPS PPDQD S 
Sbjct: 241 IEKVMEAAQASTALSGSFRGGYSLQNVNHVAHLSGALVGVVLVWLLSRIPS-PPDQDVSP 300

Query: 301 LHRKVR 307
           L+RK R
Sbjct: 301 LNRKGR 305

[Close]

BLAST of CmaCh01G015960 vs. ExPASy TrEMBL
Match: A0A5D3E659 (Rhomboid-like protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006290 PE=3 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 6.9e-133
Identity = 257/309 (83.17%), Postives = 269/309 (87.06%), Query Frame = 0


Query: 1   MQSRLQ--QLHGSRILKPRGL-REQMATTSIAHLSRFSSSSLRFSSPLFHPLSSSISVAQ 60
           MQ +LQ  QLHG RI KP  L   QM  TSI+  S F+ +SLRF SP FH      S+ Q
Sbjct: 1   MQFQLQQLQLHGGRISKPPTLSNNQMPLTSISLQSSFTLTSLRFPSPFFH------SLPQ 60

Query: 61  FSNVLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVY 120
           F++VL L +RS   KPIA CKMNDADLISQLELGKPLQNRK EKRVNGIFWIILLNIG+Y
Sbjct: 61  FTHVLPLHSRSFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIY 120

Query: 121 VADHIFQVRSIGNLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 180
           VADHIFQVR+IG LYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF
Sbjct: 121 VADHIFQVRNIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 180

Query: 181 ALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 240
           ALWLSYILTGVGAN+VSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG
Sbjct: 181 ALWLSYILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 240

Query: 241 QFVIEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQD 300
           QFVIEKVMEAAQASTALSGSFRGG   QNVNHVAHLSGALVGV+LVWLLSRIPSQ  DQD
Sbjct: 241 QFVIEKVMEAAQASTALSGSFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIPSQSLDQD 300

Query: 301 ASTLHRKVR 307
           AS LHRK R
Sbjct: 301 ASALHRKGR 303

[Close]

BLAST of CmaCh01G015960 vs. ExPASy TrEMBL
Match: A0A1S3CQS6 (rhomboid-like protein 11, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503716 PE=3 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 6.9e-133
Identity = 257/309 (83.17%), Postives = 269/309 (87.06%), Query Frame = 0


Query: 1   MQSRLQ--QLHGSRILKPRGL-REQMATTSIAHLSRFSSSSLRFSSPLFHPLSSSISVAQ 60
           MQ +LQ  QLHG RI KP  L   QM  TSI+  S F+ +SLRF SP FH      S+ Q
Sbjct: 1   MQFQLQQLQLHGGRISKPPTLSNNQMPLTSISLQSSFTLTSLRFPSPFFH------SLPQ 60

Query: 61  FSNVLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVY 120
           F++VL L +RS   KPIA CKMNDADLISQLELGKPLQNRK EKRVNGIFWIILLNIG+Y
Sbjct: 61  FTHVLPLHSRSFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIY 120

Query: 121 VADHIFQVRSIGNLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 180
           VADHIFQVR+IG LYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF
Sbjct: 121 VADHIFQVRNIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 180

Query: 181 ALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 240
           ALWLSYILTGVGAN+VSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG
Sbjct: 181 ALWLSYILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 240

Query: 241 QFVIEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQD 300
           QFVIEKVMEAAQASTALSGSFRGG   QNVNHVAHLSGALVGV+LVWLLSRIPSQ  DQD
Sbjct: 241 QFVIEKVMEAAQASTALSGSFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIPSQSLDQD 300

Query: 301 ASTLHRKVR 307
           AS LHRK R
Sbjct: 301 ASALHRKGR 303

[Close]

BLAST of CmaCh01G015960 vs. NCBI nr
Match: XP_022981184.1 (rhomboid-like protein 11, chloroplastic [Cucurbita maxima])

HSP 1 Score: 596.3 bits (1536), Expect = 1.5e-166
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 1   MQSRLQQLHGSRILKPRGLREQMATTSIAHLSRFSSSSLRFSSPLFHPLSSSISVAQFSN 60
           MQSRLQQLHGSRILKPRGLREQMATTSIAHLSRFSSSSLRFSSPLFHPLSSSISVAQFSN
Sbjct: 1   MQSRLQQLHGSRILKPRGLREQMATTSIAHLSRFSSSSLRFSSPLFHPLSSSISVAQFSN 60

Query: 61  VLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVAD 120
           VLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVAD
Sbjct: 61  VLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVAD 120

Query: 121 HIFQVRSIGNLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALW 180
           HIFQVRSIGNLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALW
Sbjct: 121 HIFQVRSIGNLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALW 180

Query: 181 LSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFV 240
           LSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFV
Sbjct: 181 LSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFV 240

Query: 241 IEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQDAST 300
           IEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQDAST
Sbjct: 241 IEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQDAST 300

Query: 301 LHRKVR 307
           LHRKVR
Sbjct: 301 LHRKVR 306

[Close]

BLAST of CmaCh01G015960 vs. NCBI nr
Match: XP_023524317.1 (rhomboid-like protein 11, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 590.1 bits (1520), Expect = 1.1e-164
Identity = 303/306 (99.02%), Postives = 304/306 (99.35%), Query Frame = 0


Query: 1   MQSRLQQLHGSRILKPRGLREQMATTSIAHLSRFSSSSLRFSSPLFHPLSSSISVAQFSN 60
           MQSRLQQLHGSRILKPRGLREQMATTSIAHLS FSSSSLRFSSPLFHPLSSS+SVAQFSN
Sbjct: 1   MQSRLQQLHGSRILKPRGLREQMATTSIAHLSSFSSSSLRFSSPLFHPLSSSLSVAQFSN 60

Query: 61  VLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVAD 120
           VLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVAD
Sbjct: 61  VLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVAD 120

Query: 121 HIFQVRSIGNLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALW 180
           HIFQVRSIG LYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALW
Sbjct: 121 HIFQVRSIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALW 180

Query: 181 LSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFV 240
           LSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFV
Sbjct: 181 LSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFV 240

Query: 241 IEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQDAST 300
           IEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQDAST
Sbjct: 241 IEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQDAST 300

Query: 301 LHRKVR 307
           LHRKVR
Sbjct: 301 LHRKVR 306

[Close]

BLAST of CmaCh01G015960 vs. NCBI nr
Match: XP_022940340.1 (rhomboid-like protein 11, chloroplastic [Cucurbita moschata])

HSP 1 Score: 587.8 bits (1514), Expect = 5.4e-164
Identity = 303/307 (98.70%), Postives = 305/307 (99.35%), Query Frame = 0


Query: 1   MQSRLQQLHGSRILKPRGLREQMATTSIAHLSRFSSSSLRFSSPLFHPLSSSISVAQFSN 60
           MQSRLQQLHGSRILKPRGLREQMATTSIAHLSRFSSSSLRFSSPLFHPLS+S+SVAQFSN
Sbjct: 1   MQSRLQQLHGSRILKPRGLREQMATTSIAHLSRFSSSSLRFSSPLFHPLSASLSVAQFSN 60

Query: 61  VLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVAD 120
           VLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVAD
Sbjct: 61  VLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVAD 120

Query: 121 HIFQVRSIGNLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALW 180
           HIFQVRSIGNLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALW
Sbjct: 121 HIFQVRSIGNLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALW 180

Query: 181 LSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFV 240
           LSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFV
Sbjct: 181 LSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFV 240

Query: 241 IEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPP-DQDAS 300
           IEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGV LVWLLSRIPSQPP DQDAS
Sbjct: 241 IEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVFLVWLLSRIPSQPPDDQDAS 300

Query: 301 TLHRKVR 307
           TLHRKVR
Sbjct: 301 TLHRKVR 307

[Close]

BLAST of CmaCh01G015960 vs. NCBI nr
Match: KAG6608235.1 (Rhomboid-like protein 11, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 539.3 bits (1388), Expect = 2.2e-149
Identity = 282/307 (91.86%), Postives = 284/307 (92.51%), Query Frame = 0


Query: 1   MQSRLQQLHGSRILKPRGLREQMATTSIAHLSRFSSSSLRFSSPLFHPLSSSISVAQFSN 60
           MQSRLQQLHGSRILKPRGLREQMATTSIAHLSRFSSSSLRFSSPLFHPLS+S+SVAQFSN
Sbjct: 1   MQSRLQQLHGSRILKPRGLREQMATTSIAHLSRFSSSSLRFSSPLFHPLSASLSVAQFSN 60

Query: 61  VLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVAD 120
           VLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVAD
Sbjct: 61  VLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVAD 120

Query: 121 HIFQVRSIGNLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALW 180
           HIFQVRSIGNLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALW
Sbjct: 121 HIFQVRSIGNLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALW 180

Query: 181 LSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFV 240
           LSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFV
Sbjct: 181 LSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFV 240

Query: 241 IEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPP-DQDAS 300
           IEK                      NVNHVAHLSGALVGVVLVWLLSRIPSQPP DQDAS
Sbjct: 241 IEK----------------------NVNHVAHLSGALVGVVLVWLLSRIPSQPPGDQDAS 285

Query: 301 TLHRKVR 307
           TLHRKVR
Sbjct: 301 TLHRKVR 285

[Close]

BLAST of CmaCh01G015960 vs. NCBI nr
Match: XP_038896989.1 (rhomboid-like protein 11, chloroplastic [Benincasa hispida])

HSP 1 Score: 513.8 bits (1322), Expect = 9.9e-142
Identity = 264/304 (86.84%), Postives = 277/304 (91.12%), Query Frame = 0


Query: 1   MQSRLQQLHGSRILKPRGLREQMATTSIAHLSRFSSSSLRFSSPLFHPLSSSISVAQFSN 60
           MQ +LQQLHG RI KP  L +QM  TSI+ LS F+ +S    SPLFHP SSS S+ +FS+
Sbjct: 1   MQLQLQQLHGCRISKPHSLCKQMPMTSISLLSSFTLTSFSLPSPLFHPFSSSHSLPRFSD 60

Query: 61  VLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVAD 120
           VLRLR RS  AKPIAMCKMNDADLISQLELGKPLQNRKPE+RVNGIFWIILLNIG+YVAD
Sbjct: 61  VLRLRTRSVCAKPIAMCKMNDADLISQLELGKPLQNRKPERRVNGIFWIILLNIGIYVAD 120

Query: 121 HIFQVRSIGNLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALW 180
           HIFQVRSIG LYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKL+EEEEGNFALW
Sbjct: 121 HIFQVRSIGVLYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLLEEEEGNFALW 180

Query: 181 LSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFV 240
           LSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFV
Sbjct: 181 LSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFV 240

Query: 241 IEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQDAST 300
           IEKVMEAAQASTALSGSFRGG +LQNVNHVAHLSGALVGV+LVWLLSRIPS   DQDAST
Sbjct: 241 IEKVMEAAQASTALSGSFRGGHSLQNVNHVAHLSGALVGVLLVWLLSRIPSPSHDQDAST 300

Query: 301 LHRK 305
           LH K
Sbjct: 301 LHTK 304

[Close]

BLAST of CmaCh01G015960 vs. TAIR 10
Match: AT5G25752.1 (rhomboid-like protein 11 )

HSP 1 Score: 369.8 bits (948), Expect = 2.2e-102
Identity = 192/281 (68.33%), Postives = 217/281 (77.22%), Query Frame = 0


Query: 26  TSIAHLSRFS--SSSLRFSSPLFH-------PLSSSISVAQFSNVLRLRARSTAAKPIAM 85
           + + HL R S   SSLRF  P  H       P +S+    QF  +   R++ T       
Sbjct: 2   SQLLHLHRLSLPQSSLRFRFPPLHRRRAASSPTNSTQPPLQFRPLTVSRSQIT------- 61

Query: 86  CKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVADHIFQVRSIGNLYLYHN 145
           C+ + +D+  Q EL K   NRKP+KR NGIFWIIL+N+G+Y+ADH FQVR I +LYLYHN
Sbjct: 62  CRFSQSDITPQFELDKAKDNRKPQKRANGIFWIILINLGIYLADHFFQVRGIKSLYLYHN 121

Query: 146 RPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWL 205
            PAWYQF TATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF LWLSY+ TGVGAN+VSWL
Sbjct: 122 FPAWYQFVTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYLFTGVGANLVSWL 181

Query: 206 ILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSG 265
           +LPRNAVSVGASGAVFGLF ISVLVKMSWDWRKILEVLILGQFVIE+VMEAAQAS  LSG
Sbjct: 182 VLPRNAVSVGASGAVFGLFAISVLVKMSWDWRKILEVLILGQFVIERVMEAAQASAGLSG 241

Query: 266 SFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQD 298
           +  GG +LQ VNH+AHLSGALVGVVLVWLLS+ PS   DQD
Sbjct: 242 TIYGGYSLQTVNHIAHLSGALVGVVLVWLLSKFPSASMDQD 275

[Close]

BLAST of CmaCh01G015960 vs. TAIR 10
Match: AT5G25640.1 (Rhomboid-related intramembrane serine protease family protein )

HSP 1 Score: 116.3 bits (290), Expect = 4.3e-26
Identity = 57/85 (67.06%), Postives = 70/85 (82.35%), Query Frame = 0


Query: 163 LYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVK 222
           L++ GK+VEEE+GNF LWLSY+ TGVGAN+VSW  LP N+   GASGAVFGLF ISVLVK
Sbjct: 5   LWLTGKIVEEEKGNFGLWLSYLFTGVGANMVSWFTLPPNSFFSGASGAVFGLFVISVLVK 64

Query: 223 MSWDWRKILEVLILGQFVIEKVMEA 248
           MS  W K LEVLILGQFV+++ +++
Sbjct: 65  MSRGWSKFLEVLILGQFVMKRFIDS 89

[Close]

BLAST of CmaCh01G015960 vs. TAIR 10
Match: AT1G12750.1 (RHOMBOID-like protein 6 )

HSP 1 Score: 53.1 bits (126), Expect = 4.5e-07
Identity = 48/153 (31.37%), Postives = 80/153 (52.29%), Query Frame = 0


Query: 141 YQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPR 200
           ++  TA + HA   HL  N+F + IFG  +E++ G   + L Y+++G G +I+S L L +
Sbjct: 98  WRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFIRIGLIYLISGFGGSILSALFL-Q 157

Query: 201 NAVSVGASGAVFGLFTISVLVKMSWDW---RKILEVLILGQFVIEKVMEAAQASTALSGS 260
            ++SVGASGA+ GL   ++L ++  +W   +  L  L+   F+I     A   +  L   
Sbjct: 158 KSISVGASGALLGLMG-AMLSELLTNWTIYKSKLCALLSFLFII-----AINLAIGL--- 217

Query: 261 FRGGSALQNVNHVAHLSGALVGVVLVWLLSRIP 291
                 L  V++ AH+ G L G  L ++L   P
Sbjct: 218 ------LPWVDNFAHIGGLLTGFCLGFILLMQP 234

[Close]

BLAST of CmaCh01G015960 vs. TAIR 10
Match: AT1G12750.2 (RHOMBOID-like protein 6 )

HSP 1 Score: 53.1 bits (126), Expect = 4.5e-07
Identity = 48/153 (31.37%), Postives = 80/153 (52.29%), Query Frame = 0


Query: 141 YQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPR 200
           ++  TA + HA   HL  N+F + IFG  +E++ G   + L Y+++G G +I+S L L +
Sbjct: 98  WRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFIRIGLIYLISGFGGSILSALFL-Q 157

Query: 201 NAVSVGASGAVFGLFTISVLVKMSWDW---RKILEVLILGQFVIEKVMEAAQASTALSGS 260
            ++SVGASGA+ GL   ++L ++  +W   +  L  L+   F+I     A   +  L   
Sbjct: 158 KSISVGASGALLGLMG-AMLSELLTNWTIYKSKLCALLSFLFII-----AINLAIGL--- 217

Query: 261 FRGGSALQNVNHVAHLSGALVGVVLVWLLSRIP 291
                 L  V++ AH+ G L G  L ++L   P
Sbjct: 218 ------LPWVDNFAHIGGLLTGFCLGFILLMQP 234

[Close]

BLAST of CmaCh01G015960 vs. TAIR 10
Match: AT1G12750.3 (RHOMBOID-like protein 6 )

HSP 1 Score: 53.1 bits (126), Expect = 4.5e-07
Identity = 48/153 (31.37%), Postives = 80/153 (52.29%), Query Frame = 0


Query: 141 YQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPR 200
           ++  TA + HA   HL  N+F + IFG  +E++ G   + L Y+++G G +I+S L L +
Sbjct: 98  WRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFIRIGLIYLISGFGGSILSALFL-Q 157

Query: 201 NAVSVGASGAVFGLFTISVLVKMSWDW---RKILEVLILGQFVIEKVMEAAQASTALSGS 260
            ++SVGASGA+ GL   ++L ++  +W   +  L  L+   F+I     A   +  L   
Sbjct: 158 KSISVGASGALLGLMG-AMLSELLTNWTIYKSKLCALLSFLFII-----AINLAIGL--- 217

Query: 261 FRGGSALQNVNHVAHLSGALVGVVLVWLLSRIP 291
                 L  V++ AH+ G L G  L ++L   P
Sbjct: 218 ------LPWVDNFAHIGGLLTGFCLGFILLMQP 234

The following BLAST results are available for this feature:

BLAST of CmaCh01G015960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84MB5	3.0e-101	68.33	Rhomboid-like protein 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL11...	[more]
Q8VZ48	6.3e-06	31.37	RHOMBOID-like protein 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBL6 P...	[more]
P96617	2.4e-05	27.40	Putative rhomboid protease YdcA OS=Bacillus subtilis (strain 168) OX=224308 GN=y...	[more]
Q0WQX7	3.1e-05	34.41	RHOMBOID-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBL1 PE=2 SV=1	[more]
Q9CAN1	6.9e-05	29.68	RHOMBOID-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RBL2 PE=1 SV=1	[more]

BLAST of CmaCh01G015960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J179	7.3e-167	100.00	rhomboid-like protein 11, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111480...	[more]
A0A6J1FQ99	2.6e-164	98.70	rhomboid-like protein 11, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1CNP9	7.6e-140	85.95	rhomboid-like protein 11, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A5D3E659	6.9e-133	83.17	Rhomboid-like protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CQS6	6.9e-133	83.17	rhomboid-like protein 11, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LO...	[more]

BLAST of CmaCh01G015960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022981184.1	1.5e-166	100.00	rhomboid-like protein 11, chloroplastic [Cucurbita maxima]	[more]
XP_023524317.1	1.1e-164	99.02	rhomboid-like protein 11, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022940340.1	5.4e-164	98.70	rhomboid-like protein 11, chloroplastic [Cucurbita moschata]	[more]
KAG6608235.1	2.2e-149	91.86	Rhomboid-like protein 11, chloroplastic, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_038896989.1	9.9e-142	86.84	rhomboid-like protein 11, chloroplastic [Benincasa hispida]	[more]

BLAST of CmaCh01G015960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25752.1	2.2e-102	68.33	rhomboid-like protein 11	[more]
AT5G25640.1	4.3e-26	67.06	Rhomboid-related intramembrane serine protease family protein	[more]
AT1G12750.1	4.5e-07	31.37	RHOMBOID-like protein 6	[more]
AT1G12750.2	4.5e-07	31.37	RHOMBOID-like protein 6	[more]
AT1G12750.3	4.5e-07	31.37	RHOMBOID-like protein 6	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035952	Rhomboid-like superfamily	GENE3D	1.20.1540.10		coord: 100..291 e-value: 1.7E-33 score: 117.9
IPR035952	Rhomboid-like superfamily	SUPERFAMILY	144091	Rhomboid-like	coord: 104..292
IPR022764	Peptidase S54, rhomboid domain	PFAM	PF01694	Rhomboid	coord: 137..289 e-value: 2.5E-29 score: 102.2
None	No IPR available	PANTHER	PTHR43066:SF5	RHOMBOID-LIKE PROTEIN 11, CHLOROPLASTIC-RELATED	coord: 49..299
None	No IPR available	PANTHER	PTHR43066	RHOMBOID-RELATED PROTEIN	coord: 49..299

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G015960.1	CmaCh01G015960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004252	serine-type endopeptidase activity