CmaCh01G015940 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GACCAGAGCACACCGCTATTCCTTCCTCAAAAATCTCCAATGAGAGCCGAGCAAGTTCTCATAGGCATAGAGATGGTTCTCTCTCAGCTCTCTAAACTCAACCGTTCTCTCTTTACTTCACCAATCCGCCGAAGTTTTAGCGTATTTGCAAAAACCAATAAACCCATAATCGCGGCCACAGAAGCCTCCATTCTCACTTCGCCTTCATTTTCCGCCCCCAAATCCACTCTCACGGCCGTCGAACCAGTTTCGATCACCGATTTTTCAGAATATCCCGAAGAACAACAGTTAACCATCTCCCCTGAGAAGCTATTTATTCCGCCGGAAACTGATTTCTCCGGCAGCGGCGCTGCGGGGACGAGAATCTTGAAGGGTTCGAACATTGTGTTGGGACGGTACGCGAGGGATGCGCAGATTTCCGAGGCGAATTTTGTGAAGAGTAGTGTGAGAACCGAGGACTGCCCTTCTGATGGGCTTCCTGAATTTGCCCTTGTTGGGCGCTCGAATGTGGGGAAATCGTCACTGTTGAACTCGCTCGTTCGCCGGAAGAAGCTCGCTCATACCTCCAAGAAACCAGGTCGACGGTTTGTTTTGCCATATTGTTTCTTTAATTAGTTGTGTTATTTTCATTTGTTGTGAAGCCACTGCTTTGAAAGGAAAAATGGTGTAGTTTCGTAGTCCATGAGAACTCTCCTAGCACTTGTGATATGTTTGGTGTAGTTTCATATTGTCCCTAATGCTTAACGATATTGTCCGTTTTAGCTCGTTACGTATCGCCGTCAGCCTCACGCATTTGCTAGGGAGAGGTTTGCACACTCTTATAAAGAATGTTTCGTTCCACTCTCTAACCGGTATCTCACAATCCACCTCCTTTAGGGCCCAACGTCCTCGCTAATTCACTGCTCAGTGGCTGGTTTTGATACCATTTGTAACAACCCAAGTCCACCGCCGGTAAATATTGTCTGCTTTAATCCATTACGTATCATCGTTAACCTTTTGAAACGCGTCTGTTAGGGAGAAGTTTCCACACCTTTATAAGGAATGCTTCGTTCCCCTCTTCAACCGAGGTGGGATCTCAGATAATAGATAATAGGAACTAGAGGACTGTACATGATTTTGAAGAAAATTGAACAACATAGCTTGAACAGAACAAATATCTGCCAAACTTCTTTGAACTATGCGTTTCATTGATTCAAAGCCTTGACCTTATAACTCCATTTTCTCATCATTCATCAAGGCTCTGTTGTTATGAATGATTGGCGTGTTAAATCCCATCCAATCTACGCATGCAAGTGTAGGGGTATATTAAGATTTTGAAGCTTTCATCCAATTTGCCTTCTTAAGCTAATAGAAGTGAAACATTATCGATAAAATGGGGTCGAGCTCAATCAAAACTGCCACTACTCCCAAGTGGGGTTCATTGGCACTCTCACTTCCCGACATAGATACGAGCATGTTGAGCTTTTCAGTGAGAATGAAAGTGTAAATGAATCGACCTCAAATAGAGGAATTCCTGGTCCTGTTTATATTCTTGCATTAACGGGAATGTAAAATTTAGATCCTTCTCGTGAAATTTTCTATCTCCGCTACTTGCCAGCACGTGAGAGAGAAAGGGCAAGAGAAGGAATAAGCTAATTAATGAGTTATCATAGGCCTTTTCTGTTATGATTCGAATGTCTGAAATCCCTTGTACTGTTTAATCGCAGATGGTCTCTTCCAATTGTTCTATTAAGAATGTTGGATGTGGATATAAACACTTTGTGTTTTATTGCAGGAAAGACACAGTGCATAAACCATTTTCGAATCAACGATAGTTGGTACTTGGTCGATTTGCCTGGATATGGGTATGTCTTAACTTCGAGTTGTGTCGTTGTCAGATCCCTTTTCAAAGTTCGAACTTGCTTCCATGTGACTTGCTCTGTGATGGGGCATGAGTTTGCCTCTGCCCTTATTCCTTCATATGTGCTACCTCTATTTGAGTAAATGCCAATGGCATTTGTTTGTTCCTTTTTTGTAGGTATGCATCTGCACCACGGGAACTCCGAACGGACTGGAATAAGTTTACCAAGGACTATTTCCTGAATCGGTCAACGTTGGTTTCGGTTTTCCTTCTTATAGATGCCAGCGTTCCTGCCAAACAAATTGATCTTGACTATGCTAGTTGGTTGGGCCAGAATCAGGTAATATTCTTCTTGCATGTATGAGGCATATAGAAGGAAAATATCCAATTTGCATATCTTATTTTTCTTAAAAAGACAATATCTTTTAAGAAGCTGAAAGTATTGAAGGCTGTGAGAGTACAAGAGTATGCATATGATATACTATGGGAGATCCCATGTTGGTTGGAGAAGGGAACGAAACATTCTTTATAAGGGTGTAGAAACCTCTCCCTAACAGACGTGATTTAAAACCTTGAGGGGAAACCCAGAAGAGAAAGTCCAAATAGGACAATGTCTGCTAACGGTGGGCTTGGCTGTTACAAATGGTATCAAAGTTAGGCATCGGGCGGTGTGTCAGCGGAAACGCTGGGCCCTCAAGGGGGATGAATTATGAAATCCCACATTAGTTGGAGAGGGAAACAAAGCATTCTTTATAAGGGTGTAGAAACCTCTCTATAACAGACGCGTTTTAAATTCTTGAGGGAAGCCTAAAAAAAAAGCTCACTGAGAACCATATCTGCTAATGGTGGGCTTGAGCTGATACAAATGGTATCAAAGCCAGGCACGGGCCGATGTGCCAGCGGGGACACAGGGCCTCCAAGAGGAGTGGATTGTGAGATCCCACATTGGTTGGAGAGAGAAACAAAGTATTCTTTATAAGGGTGTGGAAACCTCTCTCTACCAGAAACGTTTTAAAACTTTGAGGGAAAGTTTAAAAGGGAAAGTCCAAGAAGGACAATATCCACTAGCGGTGAGCTTGAGCTGTTACATGCTATGGGTTAAGTGTGGGGATCAATAGCGTATTAGTTAAGTGTGGGGATCAATAGCGTATTAGTTAAGGACAAAGTTGTAATTAGTTAGGGGTATCTTGGTTATAAATAAGAGTGTTGGTCCTCTCGAAAGGCTATTGTTACATAGAGATATACTACTATCTTGTGTTTTTGGTGTTGGCTGCCTATAAAAAACCACCAAAAATAACAAAACAAGGGTTGCAAAGATTCAAGAACAAAGACTCGCAGATTCTTGCTAGAGGCATTGAAGTATCCATTCCTGCATACCCCCTGTATTAAAAACAAGAGATCTTCGTTTCTTAATTTGTATTGTAAGAGCCAAATCGAAAGTCTAAGAATCGGGTTTATTTACTAGAAACTTTGTGTGAGATCCTACCTTGGTTGGAGGGGAGAGTAAAGCATTCTTTATAAGAGTGTGAAAACCTCTCCCTAACAGACACGTTTTAAAACTGTGAGGCTGACAGTGATATGTAACACGCCAAAGCGGACAATATCTGCTAGCGGTAGGTTCGGACTGTTGCAAATGGTATCAGAGCTAGACACCGAACGATGTGCTTCTAAGGGAGGTGGATTGTGAGATCCCACGTCGGTTGAAGAAGATAACGAAGCATAACTTATAAGGATGTGGAAACCTCTCTCTAACAGACGTATTTTTAAACTGTGAGACTGACGGCGATACATCACGGGCCAAAGTGAACAATATCTGCTAGTAGTGGGTTTGGACTGTTATATTTTATTTCCCATGATTTTCAGCCTTCGCCCTTCACTTAACTTGTTCCAAATCTTCTTCTGAACCTTTAGGAACAAGAATCAGCCCCTAAGTCTAATATTGTACGGTAGAAATTCATTCAATTTGATGCATTCGTTTTCAAGAAAATTCGACATGGAATGTTTCCTGCAGATTCCAATGACGATAATATTTACGAAATGCGACAAACGAAAGAAGAAAAAGAAAGATGGAAAAAGAGCAGAAGAAAATATGAGCGACTTTCAGGAACTGATTGGTGGATTTTTCCACACGACTCCGCCGTGGATTATGACCAGCAGTGTCACCCATCAAGGTCGGGACGAAATTCTTCTGCATATCGCTCAACTGAGGAACTACTGGCTCAAGCACTGATAAAACACTTCAGCCCGCCTTCCCATGTCGATCAGGTACGACCTCATATTGGTTATGCTCATGCTTGCTATATATAGAGATATCCGCTTCTTGTCCAAAAGTAGGTTCTCTCGATTTCGAGCTCCAAAATTAACAATGGCTGCAAATGTTGCAGCTTGCTGATGTTTCTCGACACGAATAGATGCACTTCATCTTGACTCAAAACGGGTCGATAGAATGTGATTCCTGTATTATATATTCAACAGCTCGAGGTCGGACGAGGACACAAAGTTTGGAGAGTTTACAAACCAACACTAACACGGCTTAATAGTGTTTCACAAGCTTCATTCTGTCACTGCTTAAAAGCTTCAAACAGGGCAATATAATGGAAGATTAGTAGAGAGTTGCTCTATTATCTTGTGGATCCCGTTTATTCCTGTTCTGGATAAGGATGGGTTTACTCCTTTGCCCAAACACTCGGCTTCATTACTCGGAGACTTGGCCTTGTTGCAAACCTCATAACTGCTGGCTTGTCCTTCTCTTTTTCCTTTAAAATAATATCCTTTAACAGTAAATTTTGGGTGTAAACAATTTCTTGGCTGTTTAACTTTTTACCATTATTATGCTTTAGTTTGTACTCTAACTTGATGCCAAGTATCGAGATTTAAAAGTTTACCACAGTAAAATTTAAAGATTTA GACCAGAGCACACCGCTATTCCTTCCTCAAAAATCTCCAATGAGAGCCGAGCAAGTTCTCATAGGCATAGAGATGGTTCTCTCTCAGCTCTCTAAACTCAACCGTTCTCTCTTTACTTCACCAATCCGCCGAAGTTTTAGCGTATTTGCAAAAACCAATAAACCCATAATCGCGGCCACAGAAGCCTCCATTCTCACTTCGCCTTCATTTTCCGCCCCCAAATCCACTCTCACGGCCGTCGAACCAGTTTCGATCACCGATTTTTCAGAATATCCCGAAGAACAACAGTTAACCATCTCCCCTGAGAAGCTATTTATTCCGCCGGAAACTGATTTCTCCGGCAGCGGCGCTGCGGGGACGAGAATCTTGAAGGGTTCGAACATTGTGTTGGGACGGTACGCGAGGGATGCGCAGATTTCCGAGGCGAATTTTGTGAAGAGTAGTGTGAGAACCGAGGACTGCCCTTCTGATGGGCTTCCTGAATTTGCCCTTGTTGGGCGCTCGAATGTGGGGAAATCGTCACTGTTGAACTCGCTCGTTCGCCGGAAGAAGCTCGCTCATACCTCCAAGAAACCAGGAAAGACACAGTGCATAAACCATTTTCGAATCAACGATAGTTGGTACTTGGTCGATTTGCCTGGATATGGGTATGCATCTGCACCACGGGAACTCCGAACGGACTGGAATAAGTTTACCAAGGACTATTTCCTGAATCGGTCAACGTTGGTTTCGGTTTTCCTTCTTATAGATGCCAGCGTTCCTGCCAAACAAATTGATCTTGACTATGCTAGTTGGTTGGGCCAGAATCAGATTCCAATGACGATAATATTTACGAAATGCGACAAACGAAAGAAGAAAAAGAAAGATGGAAAAAGAGCAGAAGAAAATATGAGCGACTTTCAGGAACTGATTGGTGGATTTTTCCACACGACTCCGCCGTGGATTATGACCAGCAGTGTCACCCATCAAGGTCGGGACGAAATTCTTCTGCATATCGCTCAACTGAGGAACTACTGGCTCAAGCACTGATAAAACACTTCAGCCCGCCTTCCCATGTCGATCAGCTTGCTGATGTTTCTCGACACGAATAGATGCACTTCATCTTGACTCAAAACGGGTCGATAGAATGTGATTCCTGTATTATATATTCAACAGCTCGAGGTCGGACGAGGACACAAAGTTTGGAGAGTTTACAAACCAACACTAACACGGCTTAATAGTGTTTCACAAGCTTCATTCTGTCACTGCTTAAAAGCTTCAAACAGGGCAATATAATGGAAGATTAGTAGAGAGTTGCTCTATTATCTTGTGGATCCCGTTTATTCCTGTTCTGGATAAGGATGGGTTTACTCCTTTGCCCAAACACTCGGCTTCATTACTCGGAGACTTGGCCTTGTTGCAAACCTCATAACTGCTGGCTTGTCCTTCTCTTTTTCCTTTAAAATAATATCCTTTAACAGTAAATTTTGGGTGTAAACAATTTCTTGGCTGTTTAACTTTTTACCATTATTATGCTTTAGTTTGTACTCTAACTTGATGCCAAGTATCGAGATTTAAAAGTTTACCACAGTAAAATTTAAAGATTTA ATGAGAGCCGAGCAAGTTCTCATAGGCATAGAGATGGTTCTCTCTCAGCTCTCTAAACTCAACCGTTCTCTCTTTACTTCACCAATCCGCCGAAGTTTTAGCGTATTTGCAAAAACCAATAAACCCATAATCGCGGCCACAGAAGCCTCCATTCTCACTTCGCCTTCATTTTCCGCCCCCAAATCCACTCTCACGGCCGTCGAACCAGTTTCGATCACCGATTTTTCAGAATATCCCGAAGAACAACAGTTAACCATCTCCCCTGAGAAGCTATTTATTCCGCCGGAAACTGATTTCTCCGGCAGCGGCGCTGCGGGGACGAGAATCTTGAAGGGTTCGAACATTGTGTTGGGACGGTACGCGAGGGATGCGCAGATTTCCGAGGCGAATTTTGTGAAGAGTAGTGTGAGAACCGAGGACTGCCCTTCTGATGGGCTTCCTGAATTTGCCCTTGTTGGGCGCTCGAATGTGGGGAAATCGTCACTGTTGAACTCGCTCGTTCGCCGGAAGAAGCTCGCTCATACCTCCAAGAAACCAGGAAAGACACAGTGCATAAACCATTTTCGAATCAACGATAGTTGGTACTTGGTCGATTTGCCTGGATATGGGTATGCATCTGCACCACGGGAACTCCGAACGGACTGGAATAAGTTTACCAAGGACTATTTCCTGAATCGGTCAACGTTGGTTTCGGTTTTCCTTCTTATAGATGCCAGCGTTCCTGCCAAACAAATTGATCTTGACTATGCTAGTTGGTTGGGCCAGAATCAGATTCCAATGACGATAATATTTACGAAATGCGACAAACGAAAGAAGAAAAAGAAAGATGGAAAAAGAGCAGAAGAAAATATGAGCGACTTTCAGGAACTGATTGGTGGATTTTTCCACACGACTCCGCCGTGGATTATGACCAGCAGTGTCACCCATCAAGGTCGGGACGAAATTCTTCTGCATATCGCTCAACTGAGGAACTACTGGCTCAAGCACTGA MRAEQVLIGIEMVLSQLSKLNRSLFTSPIRRSFSVFAKTNKPIIAATEASILTSPSFSAPKSTLTAVEPVSITDFSEYPEEQQLTISPEKLFIPPETDFSGSGAAGTRILKGSNIVLGRYARDAQISEANFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLAHTSKKPGKTQCINHFRINDSWYLVDLPGYGYASAPRELRTDWNKFTKDYFLNRSTLVSVFLLIDASVPAKQIDLDYASWLGQNQIPMTIIFTKCDKRKKKKKDGKRAEENMSDFQELIGGFFHTTPPWIMTSSVTHQGRDEILLHIAQLRNYWLKH Homology
BLAST of CmaCh01G015940 vs. ExPASy Swiss-Prot
Match: O81004 (GTP-binding protein At2g22870 OS=Arabidopsis thaliana OX=3702 GN=EMB2001 PE=2 SV=2) HSP 1 Score: 297.4 bits (760), Expect = 2.1e-79 Identity = 149/277 (53.79%), Postives = 190/277 (68.59%), Query Frame = 0
BLAST of CmaCh01G015940 vs. ExPASy Swiss-Prot
Match: A5FIZ1 (Probable GTP-binding protein EngB OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / JCM 8514 / NBRC 14942 / NCIMB 11054 / UW101) OX=376686 GN=engB PE=3 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 3.3e-45 Identity = 90/205 (43.90%), Postives = 131/205 (63.90%), Query Frame = 0
BLAST of CmaCh01G015940 vs. ExPASy Swiss-Prot
Match: A6L4J3 (Probable GTP-binding protein EngB OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / NBRC 14291 / NCTC 11154) OX=435590 GN=engB PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.3e-44 Identity = 89/195 (45.64%), Postives = 123/195 (63.08%), Query Frame = 0
BLAST of CmaCh01G015940 vs. ExPASy Swiss-Prot
Match: Q8A8T4 (Probable GTP-binding protein EngB OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) OX=226186 GN=engB PE=3 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 2.1e-44 Identity = 89/198 (44.95%), Postives = 125/198 (63.13%), Query Frame = 0
BLAST of CmaCh01G015940 vs. ExPASy Swiss-Prot
Match: Q5LDL2 (Probable GTP-binding protein EngB OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC 9343) OX=272559 GN=engB PE=3 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 3.7e-44 Identity = 90/198 (45.45%), Postives = 124/198 (62.63%), Query Frame = 0
BLAST of CmaCh01G015940 vs. ExPASy TrEMBL
Match: A0A6J1J1E8 (GTP-binding protein At2g22870-like OS=Cucurbita maxima OX=3661 GN=LOC111480403 PE=3 SV=1) HSP 1 Score: 655.6 bits (1690), Expect = 1.1e-184 Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 0
BLAST of CmaCh01G015940 vs. ExPASy TrEMBL
Match: A0A6J1FJT1 (GTP-binding protein At2g22870-like OS=Cucurbita moschata OX=3662 GN=LOC111445985 PE=3 SV=1) HSP 1 Score: 627.9 bits (1618), Expect = 2.4e-176 Identity = 312/318 (98.11%), Postives = 315/318 (99.06%), Query Frame = 0
BLAST of CmaCh01G015940 vs. ExPASy TrEMBL
Match: A0A0A0LGU2 (EngB-type G domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G888580 PE=3 SV=1) HSP 1 Score: 557.0 bits (1434), Expect = 5.3e-155 Identity = 275/318 (86.48%), Postives = 292/318 (91.82%), Query Frame = 0
BLAST of CmaCh01G015940 vs. ExPASy TrEMBL
Match: A0A5A7T5H0 (GTP-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006340 PE=3 SV=1) HSP 1 Score: 552.7 bits (1423), Expect = 1.0e-153 Identity = 274/318 (86.16%), Postives = 290/318 (91.19%), Query Frame = 0
BLAST of CmaCh01G015940 vs. ExPASy TrEMBL
Match: A0A6J1IKL5 (GTP-binding protein At2g22870-like OS=Cucurbita maxima OX=3661 GN=LOC111476474 PE=3 SV=1) HSP 1 Score: 552.4 bits (1422), Expect = 1.3e-153 Identity = 275/324 (84.88%), Postives = 291/324 (89.81%), Query Frame = 0
BLAST of CmaCh01G015940 vs. NCBI nr
Match: XP_022981183.1 (GTP-binding protein At2g22870-like [Cucurbita maxima]) HSP 1 Score: 655.6 bits (1690), Expect = 2.3e-184 Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 0
BLAST of CmaCh01G015940 vs. NCBI nr
Match: XP_022940339.1 (GTP-binding protein At2g22870-like [Cucurbita moschata]) HSP 1 Score: 627.9 bits (1618), Expect = 5.1e-176 Identity = 312/318 (98.11%), Postives = 315/318 (99.06%), Query Frame = 0
BLAST of CmaCh01G015940 vs. NCBI nr
Match: XP_023524307.1 (GTP-binding protein At2g22870-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 622.9 bits (1605), Expect = 1.6e-174 Identity = 311/318 (97.80%), Postives = 313/318 (98.43%), Query Frame = 0
BLAST of CmaCh01G015940 vs. NCBI nr
Match: KAG6608233.1 (GTP-binding protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 619.4 bits (1596), Expect = 1.8e-173 Identity = 308/318 (96.86%), Postives = 311/318 (97.80%), Query Frame = 0
BLAST of CmaCh01G015940 vs. NCBI nr
Match: KAG7037585.1 (GTP-binding protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 616.7 bits (1589), Expect = 1.2e-172 Identity = 306/312 (98.08%), Postives = 308/312 (98.72%), Query Frame = 0
BLAST of CmaCh01G015940 vs. TAIR 10
Match: AT5G11480.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 434.9 bits (1117), Expect = 5.9e-122 Identity = 224/324 (69.14%), Postives = 263/324 (81.17%), Query Frame = 0
BLAST of CmaCh01G015940 vs. TAIR 10
Match: AT2G22870.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 297.4 bits (760), Expect = 1.5e-80 Identity = 149/277 (53.79%), Postives = 190/277 (68.59%), Query Frame = 0
BLAST of CmaCh01G015940 vs. TAIR 10
Match: AT5G58370.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 105.9 bits (263), Expect = 6.2e-23 Identity = 57/138 (41.30%), Postives = 78/138 (56.52%), Query Frame = 0
BLAST of CmaCh01G015940 vs. TAIR 10
Match: AT5G58370.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 105.9 bits (263), Expect = 6.2e-23 Identity = 57/138 (41.30%), Postives = 78/138 (56.52%), Query Frame = 0
BLAST of CmaCh01G015940 vs. TAIR 10
Match: AT1G08410.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 44.7 bits (104), Expect = 1.7e-04 Identity = 32/96 (33.33%), Postives = 45/96 (46.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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