CmaCh01G014950 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh01G014950
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptiontranscription factor HY5
LocationCma_Chr01: 10499105 .. 10502265 (+)
RNA-Seq ExpressionCmaCh01G014950
SyntenyCmaCh01G014950
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGCAACGTCATTGTCCCGTCTTCACTCATGCACATCAACTTCTTACGGTGTTGATTTCGCCGGCGCAATGCAGGAACGAACCACCGCCGTCGCCTCCGCCAGTCGTACGCGATCGAGCAGCGAAAGATCGTCGAGTTCCGCGTTTCTACTTGATGTTAAAGAAGGTTCGATTTTAGTTCCTTTTTTTTGTCTTTACGATTTCTCGTGGAAAGATTGTACGTGAAGTGCTATTGGACGTCTTCTGTAGTTTTGTTTTGTTCTTTTGGTTGATGGAGACGAGTTTGTTTTGAGAAATCAGTCACCTGGCTTGGCTGTGAATGATTTTATTTGATCATCGTTCGTTTTCCTGGCCTATTTGTACGGCGAAATTGCCAGTGAATCTGTATCGGAATGAAATTAATTATTCTAACCTGAATTCGTACCAGTTTGATAGTTTCTCCTTGTTGATTCAAGCTTTTGAAATTTTGTTGATGTAGGACCGTATATAATTAATTAATCTTAATTTCCAGGAATCGCATCCTGTTTTTGTTTCATTGAGGGAGAATTACGTTATGATTTGTTTCTTTACCGAAGATATAGGAGTGGGGAGTGATGAGGAGGAGATTAGCAGAGTGCCGCAGATCTGCGGAAACTCTGCCTCTGCTGCCGGCGGCACTTCAGCATCTGGCAAAGCCCCTGCATCAGATGGCGTAAGGAGCAGAGGACGAAGCTCCGCTGACAAAGAAAGTAAAAGGCTGAAGAGGTAAAGTTTCTAGGTCTAGAATGGGGACCAAATTAGCGTATTACTGCCAATTTCTTCAGTCGTATCGTATGTGGAGGGAGTGCAGCATCTCATTTTTGTGACACACTTTATCTCTCTCTCTCTTAAAGATTGTTAAGAAACAGAGTTTCAGCACAGCAAGCAAGGGAGAGGAAAAAGGCGTATTTGGGCGACTTGGAAATAAGAGCAGCAAACTTGTTGAAAAGAAACTCCGAGCTTGAAGAGAATCTGTCCACGTTACAAAATGAGAATCAGATGCTTAGACACGTACGTCAACCAACCCCCCTCGCTTCCATTTTCTTGTTTTTAAACATTGCATGTTAATTACGTTTTCTTTCCTTTCACATATTTATGGTTATCGTTTCTCACTTTCATATTCATTTATTTCTGGTTGGTTAAATTATTGAATGCCAATAGGTTTGATCAAATTCATCCCTGTTTTATCTGGAAGTATTGATTTTCTTCCATTATATTTTGGATCTTTTCTTAGAATTTGCTAGTCTATCACTCATCTTTCAATATTCTTTTTGTTGAAACAAAACATACAATTCAATACTCAAAGAGGTAGACATTTTTAAATTCAAGTATCAATTAACTTGCTTGAACATCACAGTCTATTACACCTTTACTGATTATAAATTGTCTATTTCTGATCAATTAATTTAACATTTATTTTATACAACATGAAGAGATCAAATATACCAAGATATAGAATAATACCGATGTCATGTACTATAGACTTAAGCGATAGATATTGTTGAATTTGGGGGAAAAAAAAATCTGACTATTGTTAAGGATATTTAACTTTGTTTACCATAGTTATCATATTTAATCTTACTGTAGTTATTATATTTAATCTTTTATTATGCATTTATTGTTCTTTCTGTTTATTGTTGATATAATTTTCTTAATTCTCAACTATAAAGATTAGAATCTTTTAGCCTATTCCTTCTCATTCAAGTTTCATCGAGATTTTTCGATCCATTCTTAGATGGGGTCAGTAAACACCTAACACTATTAGATAGGCGTTTGCCGTCATTTGAACCCCAAATAGTATCTGTTCGTGGTATAATTATTTGGTTAATTTATTTTGGTAGGTTTGCATTATTTGGGTAATTTATTTTGATAGGTTTGGAGGGGCCATGGCACAACAGAGAATTATTTGAGCAATGAGAGAAAGAGAATATTTACATATAGAGTAGATAGACATTTAGTTTTGCCTCTTAATTATTTATTGTTCAATAAATACGGTGGAGAATTTAACGATGGTAATAGATGGTTTTTACAACTATTTTGAATCATTATCTCATGAAACACTTAGTTTTTTGTATCTTATTTGAGACCATTATTAATTATGGATCCTTGGCATTCTAACCAGCTGAGGATTTATTGTTTAGGACTCTCTTATCCATTCTTAACCGTATGGATCATTTTGTTTAAATGTTTGAATTTCAAACTTTCCATATCTTGAAAGAATGGGAAATAAACATAGATTCATTAATTAATATCTTGTACCAACAAGTTGTTGAAGATTATTGGAAGAGAGTCACACAAGGTGTTGAGGTTTACTAGTTCGGAATATTTATCCATTGTTATGAGGCCTTTTGGGGTAGATCAAAGCAAAACCATGAGAAAACTTATGTCCAAAGTGGACTATATCATACTATTGTAAAGAGTCGTGATTTATAACATGGTATCAGAGTCCTGTCCTAAACTTAGCCATGTGATTGAAGTGTCGAACAAAAAGTGTATTTTGTTCGAGGGGTCCATAGCTCCCGTTGGTATGAGGCTTTTTGGGGAAGTCCAAAGTTAGTTCACAAGAGCTTATACTCAGCCATGTGACTGACGAGGCTTTTTGGGAAAGTCCAAAGTTAACTCACAATAGCTTATACTCAAAGCGGACAATCTTATTATTATTTATAGGTAGCCTCCGCGTTATTATATTTGTCTAAGCCTCAACCTTTGTTGTTTATCGATTGATTTCAACTATTTGTTGATATGCGTGATGAAATTGAACCATATTCTCACTGTTCAGCAGTTATGTATGAACATCTTCCGTCTTTGTCTGAATCATTGTACTGGATAATCTTTGACCTTGTAATAATTTCGAAGAACCCATTAATACATTAGTTAATTGCTCTATACAGATACTAAAGAACACAACAACCAACAAGAGAAGTGATGGGGACACTGCTAATGCAAACCAGACTGTATAGCTGGTATGACTGTAAGTTATGGTATGTACATATTATTGATATCGACTCGAAGGGAAAGGAACGAAAAAATGGGTAGCTTTCATTTCAATAAATTGTTTGATGTGACTGCCACAATTGTTGATATTTTTATGAATATTTGAATGTGTCTCTACATAAATTAGTTCAAATTCTTTTTGTCATTCAC

mRNA sequence

AAGCAACGTCATTGTCCCGTCTTCACTCATGCACATCAACTTCTTACGGTGTTGATTTCGCCGGCGCAATGCAGGAACGAACCACCGCCGTCGCCTCCGCCAGTCGTACGCGATCGAGCAGCGAAAGATCGTCGAGTTCCGCGTTTCTACTTGATGTTAAAGAAGATATAGGAGTGGGGAGTGATGAGGAGGAGATTAGCAGAGTGCCGCAGATCTGCGGAAACTCTGCCTCTGCTGCCGGCGGCACTTCAGCATCTGGCAAAGCCCCTGCATCAGATGGCGTAAGGAGCAGAGGACGAAGCTCCGCTGACAAAGAAAGTAAAAGGCTGAAGAGATTGTTAAGAAACAGAGTTTCAGCACAGCAAGCAAGGGAGAGGAAAAAGGCGTATTTGGGCGACTTGGAAATAAGAGCAGCAAACTTGTTGAAAAGAAACTCCGAGCTTGAAGAGAATCTGTCCACGTTACAAAATGAGAATCAGATGCTTAGACACATACTAAAGAACACAACAACCAACAAGAGAAGTGATGGGGACACTGCTAATGCAAACCAGACTGTATAGCTGGTATGACTGTAAGTTATGGTATGTACATATTATTGATATCGACTCGAAGGGAAAGGAACGAAAAAATGGGTAGCTTTCATTTCAATAAATTGTTTGATGTGACTGCCACAATTGTTGATATTTTTATGAATATTTGAATGTGTCTCTACATAAATTAGTTCAAATTCTTTTTGTCATTCAC

Coding sequence (CDS)

ATGCAGGAACGAACCACCGCCGTCGCCTCCGCCAGTCGTACGCGATCGAGCAGCGAAAGATCGTCGAGTTCCGCGTTTCTACTTGATGTTAAAGAAGATATAGGAGTGGGGAGTGATGAGGAGGAGATTAGCAGAGTGCCGCAGATCTGCGGAAACTCTGCCTCTGCTGCCGGCGGCACTTCAGCATCTGGCAAAGCCCCTGCATCAGATGGCGTAAGGAGCAGAGGACGAAGCTCCGCTGACAAAGAAAGTAAAAGGCTGAAGAGATTGTTAAGAAACAGAGTTTCAGCACAGCAAGCAAGGGAGAGGAAAAAGGCGTATTTGGGCGACTTGGAAATAAGAGCAGCAAACTTGTTGAAAAGAAACTCCGAGCTTGAAGAGAATCTGTCCACGTTACAAAATGAGAATCAGATGCTTAGACACATACTAAAGAACACAACAACCAACAAGAGAAGTGATGGGGACACTGCTAATGCAAACCAGACTGTATAG

Protein sequence

MQERTTAVASASRTRSSSERSSSSAFLLDVKEDIGVGSDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQTV
Homology
[Close]
BLAST of CmaCh01G014950 vs. ExPASy Swiss-Prot
Match: O24646 (Transcription factor HY5 OS=Arabidopsis thaliana OX=3702 GN=HY5 PE=1 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 6.0e-32
Identity = 100/171 (58.48%), Postives = 120/171 (70.18%), Query Frame = 0 

Query: 1   MQERTTAVASASRTRSSSERSSSSAFLLDVKEDIGVGSDEEEISRVPQI----CGNSASA 60
           MQE+ T+  +AS   SSSERSSSSA  L++KE  G+ SD EEI RVP+      G   S 
Sbjct: 1   MQEQATSSLAASSLPSSSERSSSSAPHLEIKE--GIESD-EEIRRVPEFGGEAVGKETSG 60

Query: 61  AGGTSASG----KAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLE 120
               SA+G    +A   +  R RGR+ A+KE+KRLKRLLRNRVSAQQARERKKAYL +LE
Sbjct: 61  RESGSATGQERTQATVGESQRKRGRTPAEKENKRLKRLLRNRVSAQQARERKKAYLSELE 120

Query: 121 IRAANLLKRNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQTV 164
            R  +L  +NSELEE LSTLQNENQMLRHILKNTT NKR  G  +NA+ ++
Sbjct: 121 NRVKDLENKNSELEERLSTLQNENQMLRHILKNTTGNKRGGGGGSNADASL 168

[Close]
BLAST of CmaCh01G014950 vs. ExPASy Swiss-Prot
Match: Q9SM50 (Transcription factor HY5 OS=Solanum lycopersicum OX=4081 GN=HY5 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.8e-31
Identity = 99/153 (64.71%), Postives = 113/153 (73.86%), Query Frame = 0 

Query: 1   MQERTTAVASASRTRSSSERSSSSAFLLDVKEDIGVGSDEEEISRVPQICG-----NSAS 60
           MQE+ T+  +AS   SSSERSSSSA   ++KE  G+ SD +EI RVP++ G      SAS
Sbjct: 1   MQEQATSSIAASSLPSSSERSSSSALHHELKE--GMESD-DEIRRVPEMGGEATGTTSAS 60

Query: 61  AAGGTSASGKAPASDGV-RSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIR 120
              G SA+G+A  S G  R RGRS ADKE+KRLKRLLRNRVSAQQARERKKAYL DLE R
Sbjct: 61  GRDGVSAAGQAQPSAGTQRKRGRSPADKENKRLKRLLRNRVSAQQARERKKAYLIDLEAR 120

Query: 121 AANLLKRNSELEENLSTLQNENQMLRHILKNTT 148
              L  +N+ELEE LSTLQNENQMLRHILKNTT
Sbjct: 121 VKELETKNAELEERLSTLQNENQMLRHILKNTT 150

[Close]
BLAST of CmaCh01G014950 vs. ExPASy Swiss-Prot
Match: Q8W191 (Transcription factor HY5-like OS=Arabidopsis thaliana OX=3702 GN=HYH PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.4e-14
Identity = 67/145 (46.21%), Postives = 82/145 (56.55%), Query Frame = 0 

Query: 12  SRTRSSSERSSSSAFLLDVKEDIGVGSDEEEISRVPQI------CGNSASAAGGTSASGK 71
           S  R +   SSSS+      E+      +EE+  VP +      C  S+SA  G +    
Sbjct: 2   SLQRPNGNSSSSSSHKKHKTEE-----SDEELLMVPDMEAAGSTCVLSSSADDGVNNPEL 61

Query: 72  APASDGV----RSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKR 131
               +GV    R RGR+  DKE + LKRLLRNRVSAQQARERKK Y+ DLE RA  L   
Sbjct: 62  DQTQNGVSTAKRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQNN 121

Query: 132 NSELEENLSTLQNENQMLRHILKNT 147
           N +LEE +STL NEN MLR +L NT
Sbjct: 122 NDQLEEKISTLTNENTMLRKMLINT 141

[Close]
BLAST of CmaCh01G014950 vs. ExPASy Swiss-Prot
Match: Q54RZ9 (Probable basic-leucine zipper transcription factor G OS=Dictyostelium discoideum OX=44689 GN=bzpG PE=3 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 9.1e-04
Identity = 27/59 (45.76%), Postives = 40/59 (67.80%), Query Frame = 0 

Query: 82  KESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNENQMLR 141
           KE KR KRL++NR SA  +R+RK+  L DLE R   L   + ++ + LS+L+NEN +L+
Sbjct: 276 KELKRQKRLIKNRESAHLSRQRKRERLTDLEHRVEELSSNSIDINKTLSSLENENLILK 334

[Close]
BLAST of CmaCh01G014950 vs. ExPASy TrEMBL
Match: A0A6J1IYV9 (transcription factor HY5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480422 PE=3 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 7.3e-73
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0 

Query: 1   MQERTTAVASASRTRSSSERSSSSAFLLDVKEDIGVGSDEEEISRVPQICGNSASAAGGT 60
           MQERTTAVASASRTRSSSERSSSSAFLLDVKEDIGVGSDEEEISRVPQICGNSASAAGGT
Sbjct: 1   MQERTTAVASASRTRSSSERSSSSAFLLDVKEDIGVGSDEEEISRVPQICGNSASAAGGT 60

Query: 61  SASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLK 120
           SASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLK
Sbjct: 61  SASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLK 120

Query: 121 RNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQTV 164
           RNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQTV
Sbjct: 121 RNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQTV 163

[Close]
BLAST of CmaCh01G014950 vs. ExPASy TrEMBL
Match: A0A6J1FK24 (transcription factor HY5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446032 PE=3 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 6.2e-72
Identity = 161/163 (98.77%), Postives = 161/163 (98.77%), Query Frame = 0 

Query: 1   MQERTTAVASASRTRSSSERSSSSAFLLDVKEDIGVGSDEEEISRVPQICGNSASAAGGT 60
           MQERTTA ASA RTRSSSERSSSSAFLLDVKEDIGVGSDEEEISRVPQICGNSASAAGGT
Sbjct: 1   MQERTTAAASAGRTRSSSERSSSSAFLLDVKEDIGVGSDEEEISRVPQICGNSASAAGGT 60

Query: 61  SASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLK 120
           SASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLK
Sbjct: 61  SASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLK 120

Query: 121 RNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQTV 164
           RNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQTV
Sbjct: 121 RNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQTV 163

[Close]
BLAST of CmaCh01G014950 vs. ExPASy TrEMBL
Match: A0A6J1IVY4 (transcription factor HY5-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480422 PE=3 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.4e-70
Identity = 161/163 (98.77%), Postives = 161/163 (98.77%), Query Frame = 0 

Query: 1   MQERTTAVASASRTRSSSERSSSSAFLLDVKEDIGVGSDEEEISRVPQICGNSASAAGGT 60
           MQERTTAVASASRTRSSSERSSSSAFLLDVKE  GVGSDEEEISRVPQICGNSASAAGGT
Sbjct: 1   MQERTTAVASASRTRSSSERSSSSAFLLDVKE--GVGSDEEEISRVPQICGNSASAAGGT 60

Query: 61  SASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLK 120
           SASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLK
Sbjct: 61  SASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLK 120

Query: 121 RNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQTV 164
           RNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQTV
Sbjct: 121 RNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQTV 161

[Close]
BLAST of CmaCh01G014950 vs. ExPASy TrEMBL
Match: A0A6J1FQI7 (transcription factor HY5-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446032 PE=3 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.9e-69
Identity = 159/163 (97.55%), Postives = 159/163 (97.55%), Query Frame = 0 

Query: 1   MQERTTAVASASRTRSSSERSSSSAFLLDVKEDIGVGSDEEEISRVPQICGNSASAAGGT 60
           MQERTTA ASA RTRSSSERSSSSAFLLDVKE  GVGSDEEEISRVPQICGNSASAAGGT
Sbjct: 1   MQERTTAAASAGRTRSSSERSSSSAFLLDVKE--GVGSDEEEISRVPQICGNSASAAGGT 60

Query: 61  SASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLK 120
           SASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLK
Sbjct: 61  SASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLK 120

Query: 121 RNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQTV 164
           RNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQTV
Sbjct: 121 RNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQTV 161

[Close]
BLAST of CmaCh01G014950 vs. ExPASy TrEMBL
Match: A0A6J1CN91 (transcription factor HY5-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012541 PE=3 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.9e-53
Identity = 139/173 (80.35%), Postives = 148/173 (85.55%), Query Frame = 0 

Query: 1   MQERTTAVA----SASRTRSSSERSSSSAFLL--DVKEDIGVGSDEEEISRVPQICGNSA 60
           MQER+ A A    +A R RSSSERSSSSAF L  ++KEDIGV SDEEEISRVPQICGNSA
Sbjct: 1   MQERSAAAAANPIAAGRLRSSSERSSSSAFQLEREIKEDIGVDSDEEEISRVPQICGNSA 60

Query: 61  SAAGGTSASGKAPA----SDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGD 120
           S AGGTSASGKA A    SDG RSRGRS+ADKESKRLKRLLRNRVSAQQARERKKAYL +
Sbjct: 61  S-AGGTSASGKARAQSAGSDGPRSRGRSAADKESKRLKRLLRNRVSAQQARERKKAYLNE 120

Query: 121 LEIRAANLLKRNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQTV 164
           LEIRA NL KRNSELEE LSTLQNENQMLR ILKNTTTNKRSDGD ANAN+++
Sbjct: 121 LEIRATNLEKRNSELEEKLSTLQNENQMLRQILKNTTTNKRSDGDAANANESI 172

[Close]
BLAST of CmaCh01G014950 vs. NCBI nr
Match: XP_022981220.1 (transcription factor HY5-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 283.1 bits (723), Expect = 1.5e-72
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0 

Query: 1   MQERTTAVASASRTRSSSERSSSSAFLLDVKEDIGVGSDEEEISRVPQICGNSASAAGGT 60
           MQERTTAVASASRTRSSSERSSSSAFLLDVKEDIGVGSDEEEISRVPQICGNSASAAGGT
Sbjct: 1   MQERTTAVASASRTRSSSERSSSSAFLLDVKEDIGVGSDEEEISRVPQICGNSASAAGGT 60

Query: 61  SASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLK 120
           SASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLK
Sbjct: 61  SASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLK 120

Query: 121 RNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQTV 164
           RNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQTV
Sbjct: 121 RNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQTV 163

[Close]
BLAST of CmaCh01G014950 vs. NCBI nr
Match: XP_022940419.1 (transcription factor HY5-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 280.0 bits (715), Expect = 1.3e-71
Identity = 161/163 (98.77%), Postives = 161/163 (98.77%), Query Frame = 0 

Query: 1   MQERTTAVASASRTRSSSERSSSSAFLLDVKEDIGVGSDEEEISRVPQICGNSASAAGGT 60
           MQERTTA ASA RTRSSSERSSSSAFLLDVKEDIGVGSDEEEISRVPQICGNSASAAGGT
Sbjct: 1   MQERTTAAASAGRTRSSSERSSSSAFLLDVKEDIGVGSDEEEISRVPQICGNSASAAGGT 60

Query: 61  SASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLK 120
           SASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLK
Sbjct: 61  SASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLK 120

Query: 121 RNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQTV 164
           RNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQTV
Sbjct: 121 RNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQTV 163

[Close]
BLAST of CmaCh01G014950 vs. NCBI nr
Match: XP_023524405.1 (transcription factor HY5-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 275.8 bits (704), Expect = 2.4e-70
Identity = 159/163 (97.55%), Postives = 159/163 (97.55%), Query Frame = 0 

Query: 1   MQERTTAVASASRTRSSSERSSSSAFLLDVKEDIGVGSDEEEISRVPQICGNSASAAGGT 60
           MQERT AVASA RTRSSSERSSSSAFLLDVKEDIGVGSDEEE SRVPQICGNSASAAGGT
Sbjct: 1   MQERTAAVASAGRTRSSSERSSSSAFLLDVKEDIGVGSDEEETSRVPQICGNSASAAGGT 60

Query: 61  SASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLK 120
           SASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLK
Sbjct: 61  SASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLK 120

Query: 121 RNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQTV 164
           RNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQ V
Sbjct: 121 RNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQAV 163

[Close]
BLAST of CmaCh01G014950 vs. NCBI nr
Match: XP_022981221.1 (transcription factor HY5-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 274.2 bits (700), Expect = 7.0e-70
Identity = 161/163 (98.77%), Postives = 161/163 (98.77%), Query Frame = 0 

Query: 1   MQERTTAVASASRTRSSSERSSSSAFLLDVKEDIGVGSDEEEISRVPQICGNSASAAGGT 60
           MQERTTAVASASRTRSSSERSSSSAFLLDVKE  GVGSDEEEISRVPQICGNSASAAGGT
Sbjct: 1   MQERTTAVASASRTRSSSERSSSSAFLLDVKE--GVGSDEEEISRVPQICGNSASAAGGT 60

Query: 61  SASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLK 120
           SASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLK
Sbjct: 61  SASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLK 120

Query: 121 RNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQTV 164
           RNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQTV
Sbjct: 121 RNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQTV 161

[Close]
BLAST of CmaCh01G014950 vs. NCBI nr
Match: XP_022940420.1 (transcription factor HY5-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 271.2 bits (692), Expect = 6.0e-69
Identity = 159/163 (97.55%), Postives = 159/163 (97.55%), Query Frame = 0 

Query: 1   MQERTTAVASASRTRSSSERSSSSAFLLDVKEDIGVGSDEEEISRVPQICGNSASAAGGT 60
           MQERTTA ASA RTRSSSERSSSSAFLLDVKE  GVGSDEEEISRVPQICGNSASAAGGT
Sbjct: 1   MQERTTAAASAGRTRSSSERSSSSAFLLDVKE--GVGSDEEEISRVPQICGNSASAAGGT 60

Query: 61  SASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLK 120
           SASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLK
Sbjct: 61  SASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLK 120

Query: 121 RNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQTV 164
           RNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQTV
Sbjct: 121 RNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQTV 161

[Close]
BLAST of CmaCh01G014950 vs. TAIR 10
Match: AT5G11260.1 (Basic-leucine zipper (bZIP) transcription factor family protein )

HSP 1 Score: 138.7 bits (348), Expect = 4.3e-33
Identity = 100/171 (58.48%), Postives = 120/171 (70.18%), Query Frame = 0 

Query: 1   MQERTTAVASASRTRSSSERSSSSAFLLDVKEDIGVGSDEEEISRVPQI----CGNSASA 60
           MQE+ T+  +AS   SSSERSSSSA  L++KE  G+ SD EEI RVP+      G   S 
Sbjct: 1   MQEQATSSLAASSLPSSSERSSSSAPHLEIKE--GIESD-EEIRRVPEFGGEAVGKETSG 60

Query: 61  AGGTSASG----KAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLE 120
               SA+G    +A   +  R RGR+ A+KE+KRLKRLLRNRVSAQQARERKKAYL +LE
Sbjct: 61  RESGSATGQERTQATVGESQRKRGRTPAEKENKRLKRLLRNRVSAQQARERKKAYLSELE 120

Query: 121 IRAANLLKRNSELEENLSTLQNENQMLRHILKNTTTNKRSDGDTANANQTV 164
            R  +L  +NSELEE LSTLQNENQMLRHILKNTT NKR  G  +NA+ ++
Sbjct: 121 NRVKDLENKNSELEERLSTLQNENQMLRHILKNTTGNKRGGGGGSNADASL 168

[Close]
BLAST of CmaCh01G014950 vs. TAIR 10
Match: AT3G17609.1 (HY5-homolog )

HSP 1 Score: 79.3 bits (194), Expect = 3.1e-15
Identity = 56/101 (55.45%), Postives = 65/101 (64.36%), Query Frame = 0 

Query: 50  CGNSASAAGGTSASGKAPASDGV----RSRGRSSADKESKRLKRLLRNRVSAQQARERKK 109
           C  S+SA  G +        +GV    R RGR+  DKE + LKRLLRNRVSAQQARERKK
Sbjct: 27  CVLSSSADDGVNNPELDQTQNGVSTAKRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKK 86

Query: 110 AYLGDLEIRAANLLKRNSELEENLSTLQNENQMLRHILKNT 147
            Y+ DLE RA  L   N +LEE +STL NEN MLR +L NT
Sbjct: 87  VYVSDLESRANELQNNNDQLEEKISTLTNENTMLRKMLINT 127

[Close]
BLAST of CmaCh01G014950 vs. TAIR 10
Match: AT3G17609.2 (HY5-homolog )

HSP 1 Score: 79.3 bits (194), Expect = 3.1e-15
Identity = 67/145 (46.21%), Postives = 82/145 (56.55%), Query Frame = 0 

Query: 12  SRTRSSSERSSSSAFLLDVKEDIGVGSDEEEISRVPQI------CGNSASAAGGTSASGK 71
           S  R +   SSSS+      E+      +EE+  VP +      C  S+SA  G +    
Sbjct: 2   SLQRPNGNSSSSSSHKKHKTEE-----SDEELLMVPDMEAAGSTCVLSSSADDGVNNPEL 61

Query: 72  APASDGV----RSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKR 131
               +GV    R RGR+  DKE + LKRLLRNRVSAQQARERKK Y+ DLE RA  L   
Sbjct: 62  DQTQNGVSTAKRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQNN 121

Query: 132 NSELEENLSTLQNENQMLRHILKNT 147
           N +LEE +STL NEN MLR +L NT
Sbjct: 122 NDQLEEKISTLTNENTMLRKMLINT 141

[Close]
BLAST of CmaCh01G014950 vs. TAIR 10
Match: AT3G17609.3 (HY5-homolog )

HSP 1 Score: 79.3 bits (194), Expect = 3.1e-15
Identity = 56/101 (55.45%), Postives = 65/101 (64.36%), Query Frame = 0 

Query: 50  CGNSASAAGGTSASGKAPASDGV----RSRGRSSADKESKRLKRLLRNRVSAQQARERKK 109
           C  S+SA  G +        +GV    R RGR+  DKE + LKRLLRNRVSAQQARERKK
Sbjct: 12  CVLSSSADDGVNNPELDQTQNGVSTAKRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKK 71

Query: 110 AYLGDLEIRAANLLKRNSELEENLSTLQNENQMLRHILKNT 147
            Y+ DLE RA  L   N +LEE +STL NEN MLR +L NT
Sbjct: 72  VYVSDLESRANELQNNNDQLEEKISTLTNENTMLRKMLINT 112

[Close]
BLAST of CmaCh01G014950 vs. TAIR 10
Match: AT3G17609.4 (HY5-homolog )

HSP 1 Score: 79.3 bits (194), Expect = 3.1e-15
Identity = 56/101 (55.45%), Postives = 65/101 (64.36%), Query Frame = 0 

Query: 50  CGNSASAAGGTSASGKAPASDGV----RSRGRSSADKESKRLKRLLRNRVSAQQARERKK 109
           C  S+SA  G +        +GV    R RGR+  DKE + LKRLLRNRVSAQQARERKK
Sbjct: 26  CVLSSSADDGVNNPELDQTQNGVSTAKRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKK 85

Query: 110 AYLGDLEIRAANLLKRNSELEENLSTLQNENQMLRHILKNT 147
            Y+ DLE RA  L   N +LEE +STL NEN MLR +L NT
Sbjct: 86  VYVSDLESRANELQNNNDQLEEKISTLTNENTMLRKMLINT 126

The following BLAST results are available for this feature:
BLAST of CmaCh01G014950 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O246466.0e-3258.48Transcription factor HY5 OS=Arabidopsis thaliana OX=3702 GN=HY5 PE=1 SV=1[more]
Q9SM501.8e-3164.71Transcription factor HY5 OS=Solanum lycopersicum OX=4081 GN=HY5 PE=2 SV=1[more]
Q8W1914.4e-1446.21Transcription factor HY5-like OS=Arabidopsis thaliana OX=3702 GN=HYH PE=1 SV=1[more]
Q54RZ99.1e-0445.76Probable basic-leucine zipper transcription factor G OS=Dictyostelium discoideum... [more]
BLAST of CmaCh01G014950 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IYV97.3e-73100.00transcription factor HY5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11148... [more]
A0A6J1FK246.2e-7298.77transcription factor HY5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1IVY43.4e-7098.77transcription factor HY5-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11148... [more]
A0A6J1FQI72.9e-6997.55transcription factor HY5-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1CN912.9e-5380.35transcription factor HY5-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC11... [more]
BLAST of CmaCh01G014950 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022981220.11.5e-72100.00transcription factor HY5-like isoform X1 [Cucurbita maxima][more]
XP_022940419.11.3e-7198.77transcription factor HY5-like isoform X1 [Cucurbita moschata][more]
XP_023524405.12.4e-7097.55transcription factor HY5-like isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022981221.17.0e-7098.77transcription factor HY5-like isoform X2 [Cucurbita maxima][more]
XP_022940420.16.0e-6997.55transcription factor HY5-like isoform X2 [Cucurbita moschata][more]
BLAST of CmaCh01G014950 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G11260.14.3e-3358.48Basic-leucine zipper (bZIP) transcription factor family protein [more]
AT3G17609.13.1e-1555.45HY5-homolog [more]
AT3G17609.23.1e-1546.21HY5-homolog [more]
AT3G17609.33.1e-1555.45HY5-homolog [more]
AT3G17609.43.1e-1555.45HY5-homolog [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 80..100
NoneNo IPR availableCOILSCoilCoilcoord: 108..142
NoneNo IPR availableGENE3D1.20.5.490Single helix bincoord: 104..145
e-value: 2.5E-16
score: 61.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availablePANTHERPTHR46714:SF6TRANSCRIPTIONAL ACTIVATOR HAC1coord: 1..152
NoneNo IPR availableCDDcd14704bZIP_HY5-likecoord: 86..137
e-value: 4.29362E-16
score: 66.4438
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 85..143
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 81..145
e-value: 1.3E-12
score: 58.0
IPR004827Basic-leucine zipper domainPFAMPF00170bZIP_1coord: 82..142
e-value: 1.0E-11
score: 44.8
IPR004827Basic-leucine zipper domainPROSITEPS00036BZIP_BASICcoord: 88..103
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 83..146
score: 11.507094
IPR044280Transcriptional activator Hac1/HY5PANTHERPTHR46714TRANSCRIPTIONAL ACTIVATOR HAC1coord: 1..152

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh01G014950.1CmaCh01G014950.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045944 positive regulation of transcription by RNA polymerase II
biological_process GO:0010017 red or far-red light signaling pathway
biological_process GO:0010099 regulation of photomorphogenesis
biological_process GO:0010218 response to far red light
biological_process GO:0010114 response to red light
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function GO:0003700 DNA-binding transcription factor activity