CmaCh01G014370 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh01G014370
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	dehydration-responsive element-binding protein 3-like
Location	Cma_Chr01: 10106811 .. 10107515 (+)
RNA-Seq Expression	CmaCh01G014370
Synteny	CmaCh01G014370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCCAAACAGAGGAGCCTCCAACCCAATCCATCAGCCCCACCAGCAGCAAGCGCGTTCGAGATTCCAGCAAGCACCCACTCTACCGTGGCGTCCGAATGCGAGCTTGGGGCAAATGGGTGTCCGAAATCCGCGAGCCCCGTAAGAAATCCCGCATTTGGCTCGGCACCTTCCCCACACCCGAGATGGCCGCTAGAGCCCACGACGTCGCTGCTTTATCCATCAAAGGCAACAATTCCGCTATTCTCAACTTCCCTGAACTCGCCCACTCCCTCCCCCGCCCTGCCTCCTTCGCCCCTCGCGACATCCAAGCCGCTGCCGCTAAAGCCGCGCACATGGACCCTTCCCAATACTCTGCTTCCGCCGCCGACGACGATTCCGACGACCTCGCAGAGATCATCAAACTCCCCAATCTGGGCACCAACTACGACCACTCCATCGGCAATAACGAATTTGTCCTCATGGATTCAAGCGAGAGCTGCTGGGCTTATCCGCCGCCCTGGGTTCGAACCATGGAGGATACAGCGGAGGATGGTAATTTCTTGAGGGATTATTGAATTTAGGCTTAATTGTATAAATGGGTTTATCAAAATTGGTAATTAGATTGTTGTTGTGTTAAGTTTCTGTTTTTAATTAATGCATTTAACTTTCCGTGGTCCTTCCTTTATTGGTCATTAAATTTTAACCCTAATACAGATTTATGA

mRNA sequence

ATGTCCCAAACAGAGGAGCCTCCAACCCAATCCATCAGCCCCACCAGCAGCAAGCGCGTTCGAGATTCCAGCAAGCACCCACTCTACCGTGGCGTCCGAATGCGAGCTTGGGGCAAATGGGTGTCCGAAATCCGCGAGCCCCGTAAGAAATCCCGCATTTGGCTCGGCACCTTCCCCACACCCGAGATGGCCGCTAGAGCCCACGACGTCGCTGCTTTATCCATCAAAGGCAACAATTCCGCTATTCTCAACTTCCCTGAACTCGCCCACTCCCTCCCCCGCCCTGCCTCCTTCGCCCCTCGCGACATCCAAGCCGCTGCCGCTAAAGCCGCGCACATGGACCCTTCCCAATACTCTGCTTCCGCCGCCGACGACGATTCCGACGACCTCGCAGAGATCATCAAACTCCCCAATCTGGGCACCAACTACGACCACTCCATCGGCAATAACGAATTTGTCCTCATGGATTCAAGCGAGAGCTGCTGGGCTTATCCGCCGCCCTGGGTTCGAACCATGGAGGATACAGCGGAGGATGATTTATGA

Coding sequence (CDS)

ATGTCCCAAACAGAGGAGCCTCCAACCCAATCCATCAGCCCCACCAGCAGCAAGCGCGTTCGAGATTCCAGCAAGCACCCACTCTACCGTGGCGTCCGAATGCGAGCTTGGGGCAAATGGGTGTCCGAAATCCGCGAGCCCCGTAAGAAATCCCGCATTTGGCTCGGCACCTTCCCCACACCCGAGATGGCCGCTAGAGCCCACGACGTCGCTGCTTTATCCATCAAAGGCAACAATTCCGCTATTCTCAACTTCCCTGAACTCGCCCACTCCCTCCCCCGCCCTGCCTCCTTCGCCCCTCGCGACATCCAAGCCGCTGCCGCTAAAGCCGCGCACATGGACCCTTCCCAATACTCTGCTTCCGCCGCCGACGACGATTCCGACGACCTCGCAGAGATCATCAAACTCCCCAATCTGGGCACCAACTACGACCACTCCATCGGCAATAACGAATTTGTCCTCATGGATTCAAGCGAGAGCTGCTGGGCTTATCCGCCGCCCTGGGTTCGAACCATGGAGGATACAGCGGAGGATGATTTATGA

Protein sequence

MSQTEEPPTQSISPTSSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAHMDPSQYSASAADDDSDDLAEIIKLPNLGTNYDHSIGNNEFVLMDSSESCWAYPPPWVRTMEDTAEDDL

Homology

[Close]

BLAST of CmaCh01G014370 vs. ExPASy Swiss-Prot
Match: Q9LYD3 (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 4.9e-51
Identity = 111/186 (59.68%), Postives = 130/186 (69.89%), Query Frame = 0


Query: 13  SPTSSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAA 72
           S   +KR RDS KHP+YRGVRMR WGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAA
Sbjct: 35  SEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAA 94

Query: 73  LSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAHMDP-SQYSASAADD------ 132
           LSIKG  +AILNFPELA S PRP S +PRDIQ AA KAAHM+P + +S+S +        
Sbjct: 95  LSIKG-TAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTTSFSSSTSSSSSLSST 154

Query: 133 ---------------DSDDLAEIIKLPNLGTNYDHSIGN--NEFVLMDSSESCWAYPPPW 175
                          +S++L EI++LP+LG +YD    N  NEFV  DS + C  YPPPW
Sbjct: 155 SSLESLVLVMDLSRTESEELGEIVELPSLGASYDVDSANLGNEFVFYDSVDYC-LYPPPW 214

[Close]

BLAST of CmaCh01G014370 vs. ExPASy Swiss-Prot
Match: Q39127 (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN=TINY PE=2 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 7.3e-47
Identity = 102/172 (59.30%), Postives = 122/172 (70.93%), Query Frame = 0


Query: 18  KRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKG 77
           K V+DS KHP+YRGVR R WGKWVSEIREPRKKSRIWLGTFP+PEMAARAHDVAALSIKG
Sbjct: 25  KPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKG 84

Query: 78  NNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAHMDPSQYSASAAD------------- 137
             SAILNFP+LA S PRP+S +PRDIQ AA KAAHM+ SQ  +S++              
Sbjct: 85  -ASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETSQSFSSSSSLTFSSSQSSSSLE 144

Query: 138 -------DDSDDLAEIIKLPNLGTNYDHSIG-NNEFVLMDSSESCWAYPPPW 169
                    S++L EI++LP+LG++YD      NEF+  DS++  W YPP W
Sbjct: 145 SLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEFIFSDSAD-LWPYPPQW 194

[Close]

BLAST of CmaCh01G014370 vs. ExPASy Swiss-Prot
Match: Q9M080 (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 GN=ERF043 PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 7.9e-41
Identity = 100/197 (50.76%), Postives = 124/197 (62.94%), Query Frame = 0


Query: 15  TSSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALS 74
           +S K  ++++K P+YRGVRMR+WGKWVSEIREPRKKSRIWLGTFPT EMA RAHDVAA+S
Sbjct: 5   SSDKEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMS 64

Query: 75  IKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAHMD-------------------- 134
           IKG  SAILNFPEL+  LPRP S +PRD++AAA KAA MD                    
Sbjct: 65  IKG-TSAILNFPELSKLLPRPVSLSPRDVRAAATKAALMDFDTTAFRSDTETSETTTSNK 124

Query: 135 --------------PSQYSASAADDD---SDDLAEIIKLPNLGTNYDHSIGNNEFVLMDS 175
                          S +S+  + ++   SDDL EI+KLP+LGT+ + S   NEFV+ DS
Sbjct: 125 MSESSESNETVSFSSSSWSSVTSIEESTVSDDLDEIVKLPSLGTSLNES---NEFVIFDS 184

[Close]

BLAST of CmaCh01G014370 vs. ExPASy Swiss-Prot
Match: O80654 (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 GN=ERF037 PE=1 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 4.3e-39
Identity = 102/190 (53.68%), Postives = 119/190 (62.63%), Query Frame = 0


Query: 16  SSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSI 75
           + KRVR     P YRGVRMR WGKWVSEIREPRKKSRIWLGTF TPEMAARAHD AAL+I
Sbjct: 33  TKKRVRSD---PGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTI 92

Query: 76  KGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAHMDPSQYSASAADDD--------- 135
           KG  SA+LNFPELA  LPRPAS +PRD+QAAAA AA MD S  S+S    D         
Sbjct: 93  KG-TSAVLNFPELATYLPRPASSSPRDVQAAAAVAAAMDFSPSSSSLVVSDPTTVIAPAE 152

Query: 136 --------------------------SDDLAEIIKLPNLGTNYDHSIGNNEFVLMDSSES 169
                                     +++L+EI++LP+L T+YD S+  +EFV +DS   
Sbjct: 153 TQLSSSSYSTCTSSSLSPSSEEAASTAEELSEIVELPSLETSYDESL--SEFVYVDS--- 211

[Close]

BLAST of CmaCh01G014370 vs. ExPASy Swiss-Prot
Match: Q9LU18 (Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana OX=3702 GN=ERF036 PE=2 SV=2)

HSP 1 Score: 161.0 bits (406), Expect = 1.3e-38
Identity = 96/192 (50.00%), Postives = 123/192 (64.06%), Query Frame = 0


Query: 1   MSQTEEPPTQSISPTSSKRVRDSS--------KHPLYRGVRMRAWGKWVSEIREPRKKSR 60
           +S+ E PP  +    + KR RDSS        +HP+YRGVRMR+WGKWVSEIR+PRKK+R
Sbjct: 28  LSEEEAPPRNN---NTRKRRRDSSSASSSSSMQHPVYRGVRMRSWGKWVSEIRQPRKKTR 87

Query: 61  IWLGTFPTPEMAARAHDVAALSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAH 120
           IWLGTF T +MAARAHDVAAL+IKG +SA+LNFPELA   PRPAS +P DIQ AAA+AA 
Sbjct: 88  IWLGTFVTADMAARAHDVAALTIKG-SSAVLNFPELASLFPRPASSSPHDIQTAAAEAAA 147

Query: 121 M---------------DPSQYSA--SAADDDSDDLAEIIKLPNLGT-NYDHSIGNNEFVL 167
           M                PS  S+  +A  +D + L +I++LPN+   +YD S+ +   + 
Sbjct: 148 MVVEEKLLEKDEAPEAPPSSESSYVAAESEDEERLEKIVELPNIEEGSYDESVTSRADLA 207

[Close]

BLAST of CmaCh01G014370 vs. ExPASy TrEMBL
Match: A0A6J1J127 (dehydration-responsive element-binding protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111480318 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 6.8e-96
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MSQTEEPPTQSISPTSSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPT 60
           MSQTEEPPTQSISPTSSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPT
Sbjct: 1   MSQTEEPPTQSISPTSSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPT 60

Query: 61  PEMAARAHDVAALSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAHMDPSQYSA 120
           PEMAARAHDVAALSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAHMDPSQYSA
Sbjct: 61  PEMAARAHDVAALSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAHMDPSQYSA 120

Query: 121 SAADDDSDDLAEIIKLPNLGTNYDHSIGNNEFVLMDSSESCWAYPPPWVRTMEDTAED 179
           SAADDDSDDLAEIIKLPNLGTNYDHSIGNNEFVLMDSSESCWAYPPPWVRTMEDTAED
Sbjct: 121 SAADDDSDDLAEIIKLPNLGTNYDHSIGNNEFVLMDSSESCWAYPPPWVRTMEDTAED 178

[Close]

BLAST of CmaCh01G014370 vs. ExPASy TrEMBL
Match: A0A6J1FNI3 (dehydration-responsive element-binding protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111446782 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.0e-91
Identity = 176/185 (95.14%), Postives = 176/185 (95.14%), Query Frame = 0


Query: 1   MSQTEEPPTQSISPT------SSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIW 60
           MSQTEEPPTQSISPT      SSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIW
Sbjct: 1   MSQTEEPPTQSISPTSSNSSSSSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIW 60

Query: 61  LGTFPTPEMAARAHDVAALSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAHMD 120
           LGTFPTPEMAARAHDVAALSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAHMD
Sbjct: 61  LGTFPTPEMAARAHDVAALSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAHMD 120

Query: 121 PSQYSA-SAADDDSDDLAEIIKLPNLGTNYDHSIGNNEFVLMDSSESCWAYPPPWVRTME 179
           PSQYSA SAA DDSDDLAEIIKLPNLGTNYDHSIGNNEFVLMDSSESCWAYPPPWVRTME
Sbjct: 121 PSQYSASSAAPDDSDDLAEIIKLPNLGTNYDHSIGNNEFVLMDSSESCWAYPPPWVRTME 180

[Close]

BLAST of CmaCh01G014370 vs. ExPASy TrEMBL
Match: A0A6J1F7M6 (dehydration-responsive element-binding protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111442837 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 3.6e-65
Identity = 134/176 (76.14%), Postives = 150/176 (85.23%), Query Frame = 0


Query: 1   MSQTEEPPTQSISPTSSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPT 60
           ++Q     T + S  ++KRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPT
Sbjct: 9   ITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPT 68

Query: 61  PEMAARAHDVAALSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAHMDPSQYSA 120
           PEMAARAHDVAALSIKG NSAILNFPELAHSLPRP SFAPRD+QAAAAKAAHMDP QYS 
Sbjct: 69  PEMAARAHDVAALSIKG-NSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHMDPFQYST 128

Query: 121 SAADDDSDDLAEIIKLPNLGTNYDHSIGNNEFVLMDSSESCWAYPPPWVRTMEDTA 177
               DDSD+L+EI+KLP+L TNY     NNEFVLMDS++  W YPPPW+RTM+D++
Sbjct: 129 ----DDSDELSEIVKLPSLTTNY----LNNEFVLMDSTDG-WVYPPPWLRTMDDSS 174

[Close]

BLAST of CmaCh01G014370 vs. ExPASy TrEMBL
Match: A0A6J1ILS4 (dehydration-responsive element-binding protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111476756 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.8e-64
Identity = 131/162 (80.86%), Postives = 142/162 (87.65%), Query Frame = 0


Query: 13  SPTSSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAA 72
           S  ++KRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAA
Sbjct: 27  SNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAA 86

Query: 73  LSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAHMDPSQYSASAADDDSDDLAE 132
           LSIKG NSA LNFPELAHSLPRP SFAPRD+QAAAAKAAHMDP QYS     DDSD+L+E
Sbjct: 87  LSIKG-NSATLNFPELAHSLPRPVSFAPRDVQAAAAKAAHMDPFQYST----DDSDELSE 146

Query: 133 IIKLPNLGTNYDHSIGNNEFVLMDSSESCWAYPPPWVRTMED 175
           I+KLP+L TNY     NNEFVLMDS++  W YPPPW+RTM+D
Sbjct: 147 IVKLPSLSTNY----LNNEFVLMDSTDG-WVYPPPWLRTMDD 178

[Close]

BLAST of CmaCh01G014370 vs. ExPASy TrEMBL
Match: A0A0A0LHV3 (AP2 domain class transcription factor OS=Cucumis sativus OX=3659 GN=Csa_3G895680 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 1.3e-54
Identity = 124/184 (67.39%), Postives = 142/184 (77.17%), Query Frame = 0


Query: 7   PPTQSISPTSSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAAR 66
           PP+ + +  ++KRVR S    +YRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAAR
Sbjct: 22  PPSSTTTTNNNKRVRPSDS--IYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAAR 81

Query: 67  AHDVAALSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAHMD------------ 126
           AHDVAALSIKG NSAILNFPELAHSLPRP SFAPRDIQAAA+KAAHMD            
Sbjct: 82  AHDVAALSIKG-NSAILNFPELAHSLPRPVSFAPRDIQAAASKAAHMDFNFHYSSTSSSS 141

Query: 127 -PSQYSASAADDDSD--DLAEIIKLPNL-GTNYDHSIGNNEFVLMDSSESCWAYPPPWVR 175
             +  S S+ +DD D  +L+EI+KLP L  +NYD    ++EFVLMDS+E  W YPPPW+R
Sbjct: 142 VSTSLSPSSPEDDEDGHELSEIVKLPTLASSNYD----DHEFVLMDSTEG-WVYPPPWLR 197

[Close]

BLAST of CmaCh01G014370 vs. NCBI nr
Match: XP_022981058.1 (dehydration-responsive element-binding protein 3-like [Cucurbita maxima])

HSP 1 Score: 359.8 bits (922), Expect = 1.4e-95
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MSQTEEPPTQSISPTSSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPT 60
           MSQTEEPPTQSISPTSSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPT
Sbjct: 1   MSQTEEPPTQSISPTSSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPT 60

Query: 61  PEMAARAHDVAALSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAHMDPSQYSA 120
           PEMAARAHDVAALSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAHMDPSQYSA
Sbjct: 61  PEMAARAHDVAALSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAHMDPSQYSA 120

Query: 121 SAADDDSDDLAEIIKLPNLGTNYDHSIGNNEFVLMDSSESCWAYPPPWVRTMEDTAED 179
           SAADDDSDDLAEIIKLPNLGTNYDHSIGNNEFVLMDSSESCWAYPPPWVRTMEDTAED
Sbjct: 121 SAADDDSDDLAEIIKLPNLGTNYDHSIGNNEFVLMDSSESCWAYPPPWVRTMEDTAED 178

[Close]

BLAST of CmaCh01G014370 vs. NCBI nr
Match: XP_023525473.1 (dehydration-responsive element-binding protein 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 351.3 bits (900), Expect = 5.0e-93
Identity = 176/180 (97.78%), Postives = 178/180 (98.89%), Query Frame = 0


Query: 1   MSQTEEPPTQSISP--TSSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTF 60
           MSQTEEPPTQSISP  +SSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTF
Sbjct: 1   MSQTEEPPTQSISPSSSSSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTF 60

Query: 61  PTPEMAARAHDVAALSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAHMDPSQY 120
           PTPEMAARAHDVAALSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAHMDPSQY
Sbjct: 61  PTPEMAARAHDVAALSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAHMDPSQY 120

Query: 121 SASAADDDSDDLAEIIKLPNLGTNYDHSIGNNEFVLMDSSESCWAYPPPWVRTMEDTAED 179
           SASAA+DDSDDLAEIIKLPNLGTNYDHSIGNNEFVLMDSSESCWAYPPPWVRTMEDTAED
Sbjct: 121 SASAANDDSDDLAEIIKLPNLGTNYDHSIGNNEFVLMDSSESCWAYPPPWVRTMEDTAED 180

[Close]

BLAST of CmaCh01G014370 vs. NCBI nr
Match: XP_022941499.1 (dehydration-responsive element-binding protein 3-like [Cucurbita moschata])

HSP 1 Score: 344.4 bits (882), Expect = 6.1e-91
Identity = 176/185 (95.14%), Postives = 176/185 (95.14%), Query Frame = 0


Query: 1   MSQTEEPPTQSISPT------SSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIW 60
           MSQTEEPPTQSISPT      SSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIW
Sbjct: 1   MSQTEEPPTQSISPTSSNSSSSSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIW 60

Query: 61  LGTFPTPEMAARAHDVAALSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAHMD 120
           LGTFPTPEMAARAHDVAALSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAHMD
Sbjct: 61  LGTFPTPEMAARAHDVAALSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAHMD 120

Query: 121 PSQYSA-SAADDDSDDLAEIIKLPNLGTNYDHSIGNNEFVLMDSSESCWAYPPPWVRTME 179
           PSQYSA SAA DDSDDLAEIIKLPNLGTNYDHSIGNNEFVLMDSSESCWAYPPPWVRTME
Sbjct: 121 PSQYSASSAAPDDSDDLAEIIKLPNLGTNYDHSIGNNEFVLMDSSESCWAYPPPWVRTME 180

[Close]

BLAST of CmaCh01G014370 vs. NCBI nr
Match: KAG7031725.1 (Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 343.2 bits (879), Expect = 1.4e-90
Identity = 176/187 (94.12%), Postives = 176/187 (94.12%), Query Frame = 0


Query: 1   MSQTEEPPTQSISPT--------SSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSR 60
           MSQTEEPPTQSISPT        SSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSR
Sbjct: 1   MSQTEEPPTQSISPTSSSSSSSSSSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSR 60

Query: 61  IWLGTFPTPEMAARAHDVAALSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAH 120
           IWLGTFPTPEMAARAHDVAALSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAH
Sbjct: 61  IWLGTFPTPEMAARAHDVAALSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAH 120

Query: 121 MDPSQYSA-SAADDDSDDLAEIIKLPNLGTNYDHSIGNNEFVLMDSSESCWAYPPPWVRT 179
           MDPSQYSA SAA DDSDDLAEIIKLPNLGTNYDHSIGNNEFVLMDSSESCWAYPPPWVRT
Sbjct: 121 MDPSQYSASSAAADDSDDLAEIIKLPNLGTNYDHSIGNNEFVLMDSSESCWAYPPPWVRT 180

[Close]

BLAST of CmaCh01G014370 vs. NCBI nr
Match: KAG6608092.1 (Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 340.9 bits (873), Expect = 6.8e-90
Identity = 175/188 (93.09%), Postives = 175/188 (93.09%), Query Frame = 0


Query: 1   MSQTEEPPTQSISPT---------SSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKS 60
           MSQTEEPP QSISPT         SSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKS
Sbjct: 1   MSQTEEPPAQSISPTSSNSSSSSSSSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKS 60

Query: 61  RIWLGTFPTPEMAARAHDVAALSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAA 120
           RIWLGTFPTPEMAARAHDVAALSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAA
Sbjct: 61  RIWLGTFPTPEMAARAHDVAALSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAA 120

Query: 121 HMDPSQYSA-SAADDDSDDLAEIIKLPNLGTNYDHSIGNNEFVLMDSSESCWAYPPPWVR 179
           HMDPSQYSA SAA DDSDDLAEIIKLPNLGTNYDHSIGNNEFVLMDSSESCWAYPPPWVR
Sbjct: 121 HMDPSQYSASSAAADDSDDLAEIIKLPNLGTNYDHSIGNNEFVLMDSSESCWAYPPPWVR 180

[Close]

BLAST of CmaCh01G014370 vs. TAIR 10
Match: AT5G11590.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 202.2 bits (513), Expect = 3.5e-52
Identity = 111/186 (59.68%), Postives = 130/186 (69.89%), Query Frame = 0


Query: 13  SPTSSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAA 72
           S   +KR RDS KHP+YRGVRMR WGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAA
Sbjct: 35  SEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAA 94

Query: 73  LSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAHMDP-SQYSASAADD------ 132
           LSIKG  +AILNFPELA S PRP S +PRDIQ AA KAAHM+P + +S+S +        
Sbjct: 95  LSIKG-TAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTTSFSSSTSSSSSLSST 154

Query: 133 ---------------DSDDLAEIIKLPNLGTNYDHSIGN--NEFVLMDSSESCWAYPPPW 175
                          +S++L EI++LP+LG +YD    N  NEFV  DS + C  YPPPW
Sbjct: 155 SSLESLVLVMDLSRTESEELGEIVELPSLGASYDVDSANLGNEFVFYDSVDYC-LYPPPW 214

[Close]

BLAST of CmaCh01G014370 vs. TAIR 10
Match: AT5G25810.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 188.3 bits (477), Expect = 5.2e-48
Identity = 102/172 (59.30%), Postives = 122/172 (70.93%), Query Frame = 0


Query: 18  KRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKG 77
           K V+DS KHP+YRGVR R WGKWVSEIREPRKKSRIWLGTFP+PEMAARAHDVAALSIKG
Sbjct: 25  KPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKG 84

Query: 78  NNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAHMDPSQYSASAAD------------- 137
             SAILNFP+LA S PRP+S +PRDIQ AA KAAHM+ SQ  +S++              
Sbjct: 85  -ASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETSQSFSSSSSLTFSSSQSSSSLE 144

Query: 138 -------DDSDDLAEIIKLPNLGTNYDHSIG-NNEFVLMDSSESCWAYPPPW 169
                    S++L EI++LP+LG++YD      NEF+  DS++  W YPP W
Sbjct: 145 SLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEFIFSDSAD-LWPYPPQW 194

[Close]

BLAST of CmaCh01G014370 vs. TAIR 10
Match: AT4G32800.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 168.3 bits (425), Expect = 5.6e-42
Identity = 100/197 (50.76%), Postives = 124/197 (62.94%), Query Frame = 0


Query: 15  TSSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALS 74
           +S K  ++++K P+YRGVRMR+WGKWVSEIREPRKKSRIWLGTFPT EMA RAHDVAA+S
Sbjct: 5   SSDKEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMS 64

Query: 75  IKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAHMD-------------------- 134
           IKG  SAILNFPEL+  LPRP S +PRD++AAA KAA MD                    
Sbjct: 65  IKG-TSAILNFPELSKLLPRPVSLSPRDVRAAATKAALMDFDTTAFRSDTETSETTTSNK 124

Query: 135 --------------PSQYSASAADDD---SDDLAEIIKLPNLGTNYDHSIGNNEFVLMDS 175
                          S +S+  + ++   SDDL EI+KLP+LGT+ + S   NEFV+ DS
Sbjct: 125 MSESSESNETVSFSSSSWSSVTSIEESTVSDDLDEIVKLPSLGTSLNES---NEFVIFDS 184

[Close]

BLAST of CmaCh01G014370 vs. TAIR 10
Match: AT1G77200.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 162.5 bits (410), Expect = 3.1e-40
Identity = 102/190 (53.68%), Postives = 119/190 (62.63%), Query Frame = 0


Query: 16  SSKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSI 75
           + KRVR     P YRGVRMR WGKWVSEIREPRKKSRIWLGTF TPEMAARAHD AAL+I
Sbjct: 33  TKKRVRSD---PGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTI 92

Query: 76  KGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAHMDPSQYSASAADDD--------- 135
           KG  SA+LNFPELA  LPRPAS +PRD+QAAAA AA MD S  S+S    D         
Sbjct: 93  KG-TSAVLNFPELATYLPRPASSSPRDVQAAAAVAAAMDFSPSSSSLVVSDPTTVIAPAE 152

Query: 136 --------------------------SDDLAEIIKLPNLGTNYDHSIGNNEFVLMDSSES 169
                                     +++L+EI++LP+L T+YD S+  +EFV +DS   
Sbjct: 153 TQLSSSSYSTCTSSSLSPSSEEAASTAEELSEIVELPSLETSYDESL--SEFVYVDS--- 211

[Close]

BLAST of CmaCh01G014370 vs. TAIR 10
Match: AT3G16280.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 161.0 bits (406), Expect = 8.9e-40
Identity = 96/192 (50.00%), Postives = 123/192 (64.06%), Query Frame = 0


Query: 1   MSQTEEPPTQSISPTSSKRVRDSS--------KHPLYRGVRMRAWGKWVSEIREPRKKSR 60
           +S+ E PP  +    + KR RDSS        +HP+YRGVRMR+WGKWVSEIR+PRKK+R
Sbjct: 28  LSEEEAPPRNN---NTRKRRRDSSSASSSSSMQHPVYRGVRMRSWGKWVSEIRQPRKKTR 87

Query: 61  IWLGTFPTPEMAARAHDVAALSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAH 120
           IWLGTF T +MAARAHDVAAL+IKG +SA+LNFPELA   PRPAS +P DIQ AAA+AA 
Sbjct: 88  IWLGTFVTADMAARAHDVAALTIKG-SSAVLNFPELASLFPRPASSSPHDIQTAAAEAAA 147

Query: 121 M---------------DPSQYSA--SAADDDSDDLAEIIKLPNLGT-NYDHSIGNNEFVL 167
           M                PS  S+  +A  +D + L +I++LPN+   +YD S+ +   + 
Sbjct: 148 MVVEEKLLEKDEAPEAPPSSESSYVAAESEDEERLEKIVELPNIEEGSYDESVTSRADLA 207

The following BLAST results are available for this feature:

BLAST of CmaCh01G014370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LYD3	4.9e-51	59.68	Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q39127	7.3e-47	59.30	Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9M080	7.9e-41	50.76	Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 ...	[more]
O80654	4.3e-39	53.68	Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LU18	1.3e-38	50.00	Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CmaCh01G014370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J127	6.8e-96	100.00	dehydration-responsive element-binding protein 3-like OS=Cucurbita maxima OX=366...	[more]
A0A6J1FNI3	3.0e-91	95.14	dehydration-responsive element-binding protein 3-like OS=Cucurbita moschata OX=3...	[more]
A0A6J1F7M6	3.6e-65	76.14	dehydration-responsive element-binding protein 3-like OS=Cucurbita moschata OX=3...	[more]
A0A6J1ILS4	1.8e-64	80.86	dehydration-responsive element-binding protein 3-like OS=Cucurbita maxima OX=366...	[more]
A0A0A0LHV3	1.3e-54	67.39	AP2 domain class transcription factor OS=Cucumis sativus OX=3659 GN=Csa_3G895680...	[more]

BLAST of CmaCh01G014370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022981058.1	1.4e-95	100.00	dehydration-responsive element-binding protein 3-like [Cucurbita maxima]	[more]
XP_023525473.1	5.0e-93	97.78	dehydration-responsive element-binding protein 3-like [Cucurbita pepo subsp. pep...	[more]
XP_022941499.1	6.1e-91	95.14	dehydration-responsive element-binding protein 3-like [Cucurbita moschata]	[more]
KAG7031725.1	1.4e-90	94.12	Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperm...	[more]
KAG6608092.1	6.8e-90	93.09	Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperm...	[more]

BLAST of CmaCh01G014370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11590.1	3.5e-52	59.68	Integrase-type DNA-binding superfamily protein	[more]
AT5G25810.1	5.2e-48	59.30	Integrase-type DNA-binding superfamily protein	[more]
AT4G32800.1	5.6e-42	50.76	Integrase-type DNA-binding superfamily protein	[more]
AT1G77200.1	3.1e-40	53.68	Integrase-type DNA-binding superfamily protein	[more]
AT3G16280.1	8.9e-40	50.00	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 51..67 score: 66.52 coord: 29..40 score: 70.15
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 28..92 e-value: 1.1E-35 score: 134.5
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 27..77 e-value: 3.7E-14 score: 52.7
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 28..86 score: 23.182409
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 27..88 e-value: 1.144E-31 score: 106.972
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 28..87 e-value: 3.0E-23 score: 83.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 13..173
None	No IPR available	PANTHER	PTHR31985:SF177	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE	coord: 13..173
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 28..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G014370.1	CmaCh01G014370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity