CmaCh01G013840 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTCGGTGGAGAACGCAGATCAGAAAAGTCCAGTGAATCTTCAGCCTCTCTTTTTCTCTCTGTTTCTTATCAAGGTTCCGGCGATGGCGGAGGAGAGAGCGGTTTTCGATAGCGAAGCGGCGGAGAGAGTGGTGGCGGAGGTGAGGGAGAGCTTTAATTCCGGGAAAACGAGAAGGTACGAATGGAGAGTGGAGCAAGTGAAGAATCTGTTGAAATTGGTGGATGAAAACCAGAAAGAGATGATCGATACGGTTCATTCCGATTGTTCCAAACCCGAATTCGAAACCTTCGCTCATGAGGTTCGTCCGCTTTTTTTTATTTTATTTTATTATTATTATTAATTTGAAGAATGGTAGATTTTAATTCAATTTTAAATTTTAAAATTTGATATTTAAATAACTATTCATTGATAAAATCTTTTAAAATACTTGATTTATTTTTTTATATTTGAGTTGGATCGAATATAATCCACTTCTTCCTATCGGAGAGTTATATGCAGTAAGCCGTTTTAGTTATGTTTGTACTTGCATTCCCATATAACACTAATTTCTCAAATCTTCCTCTCAAAACTCTCTACTCCCCGTTTTCTAAACTTTCTTCTTGAACCGGAGCCAGAGGCTCGAGCATACGTTACTTGCCGTATGCGACACAATAACGAATAGGCTTAACTCACTACTTACTAATAAGGGAGTGTCGCACCATCACAATTCTGCTGCCATTAAAGTGTGATTGTGAAGAAAATTTAGATTAGTTAGAGTGATGACATTTTTATTGGTTGGATTGACTGGGTTAATAAAAAAATAGAGTTAAACTCAATCATATTATTAAAATTATTATAAAATAGGTGACCGACATTTGAATTAATTTTTTAAATAATAATAAAAATTAAAATAACCCAACAATCCAATATAGCCGAACAAAAAATTAGAGTATTGAGTTGAGTTGTGAACTTTATTGTGTTCGGGTCATCAAACCCAACCTAACTCGAGTAAGCATGAACTAATTTTAATTATTTTCATTGAAAAGCTTATTTGCAATATATTATAATTTATAAATAGTTTTCTTTTATTAAATTAGGGTTGAAATTTCAATTTTTTTTGGAAGATGTACGTAAATGTAGTTGTGATGAAAAAGAAATAATTAATTAATGCCAAAATATTTTTTTATTATATAATAATTAAACTATTAAATTTAGTATAAAAGATTAAATATAAATTTAGGAATTATTATATTAATTAAATTAATAATAAAGTGGAAATCAAAGAAATTATGAACTAAGCAGAAGAGAAACGGACAATCGGGCGGCAAGTCTGAGAACAAAGCCGGAAACGCTCCATTATTAAGCGCGTGAAGTACACGATGTTCTCGGTGGCATCGCGAATGGAGAATGGAGGATGATCAATGGCTGTGTCGTAGAACTGCGGAGCTATGCAGAAAGTGAGAAGATGGCACCTCGATCTTAACGATTAG TTCGGTGGAGAACGCAGATCAGAAAAGTCCAGTGAATCTTCAGCCTCTCTTTTTCTCTCTGTTTCTTATCAAGGTTCCGGCGATGGCGGAGGAGAGAGCGGTTTTCGATAGCGAAGCGGCGGAGAGAGTGGTGGCGGAGGTGAGGGAGAGCTTTAATTCCGGGAAAACGAGAAGGTACGAATGGAGAGTGGAGCAAGTGAAGAATCTGTTGAAATTGGTGGATGAAAACCAGAAAGAGATGATCGATACGGTTCATTCCGATTGTTCCAAACCCGAATTCGAAACCTTCGCTCATGAGAACTGCGGAGCTATGCAGAAAGTGAGAAGATGGCACCTCGATCTTAACGATTAG ATGGCGGAGGAGAGAGCGGTTTTCGATAGCGAAGCGGCGGAGAGAGTGGTGGCGGAGGTGAGGGAGAGCTTTAATTCCGGGAAAACGAGAAGGTACGAATGGAGAGTGGAGCAAGTGAAGAATCTGTTGAAATTGGTGGATGAAAACCAGAAAGAGATGATCGATACGGTTCATTCCGATTGTTCCAAACCCGAATTCGAAACCTTCGCTCATGAGAACTGCGGAGCTATGCAGAAAGTGAGAAGATGGCACCTCGATCTTAACGATTAG MAEERAVFDSEAAERVVAEVRESFNSGKTRRYEWRVEQVKNLLKLVDENQKEMIDTVHSDCSKPEFETFAHENCGAMQKVRRWHLDLND Homology
BLAST of CmaCh01G013840 vs. ExPASy Swiss-Prot
Match: Q8W033 (Aldehyde dehydrogenase family 3 member I1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALDH3I1 PE=1 SV=2) HSP 1 Score: 64.3 bits (155), Expect = 7.9e-10 Identity = 28/70 (40.00%), Postives = 48/70 (68.57%), Query Frame = 0
BLAST of CmaCh01G013840 vs. ExPASy Swiss-Prot
Match: Q8VXQ2 (Aldehyde dehydrogenase OS=Craterostigma plantagineum OX=4153 GN=ALDH PE=1 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 5.1e-09 Identity = 28/60 (46.67%), Postives = 41/60 (68.33%), Query Frame = 0
BLAST of CmaCh01G013840 vs. ExPASy Swiss-Prot
Match: Q70DU8 (Aldehyde dehydrogenase family 3 member H1 OS=Arabidopsis thaliana OX=3702 GN=ALDH3H1 PE=1 SV=2) HSP 1 Score: 58.9 bits (141), Expect = 3.3e-08 Identity = 28/68 (41.18%), Postives = 42/68 (61.76%), Query Frame = 0
BLAST of CmaCh01G013840 vs. ExPASy Swiss-Prot
Match: P47740 (Aldehyde dehydrogenase family 3 member A2 OS=Mus musculus OX=10090 GN=Aldh3a2 PE=1 SV=2) HSP 1 Score: 48.1 bits (113), Expect = 5.9e-05 Identity = 21/59 (35.59%), Postives = 40/59 (67.80%), Query Frame = 0
BLAST of CmaCh01G013840 vs. ExPASy Swiss-Prot
Match: P30839 (Aldehyde dehydrogenase family 3 member A2 OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 1.3e-04 Identity = 20/59 (33.90%), Postives = 40/59 (67.80%), Query Frame = 0
BLAST of CmaCh01G013840 vs. ExPASy TrEMBL
Match: A0A6J1J0U9 (Aldehyde dehydrogenase OS=Cucurbita maxima OX=3661 GN=LOC111480266 PE=3 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 2.2e-31 Identity = 76/90 (84.44%), Postives = 81/90 (90.00%), Query Frame = 0
BLAST of CmaCh01G013840 vs. ExPASy TrEMBL
Match: A0A6J1FTT4 (Aldehyde dehydrogenase OS=Cucurbita moschata OX=3662 GN=LOC111446767 PE=3 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 6.0e-29 Identity = 72/90 (80.00%), Postives = 79/90 (87.78%), Query Frame = 0
BLAST of CmaCh01G013840 vs. ExPASy TrEMBL
Match: A0A6J1BS77 (Aldehyde dehydrogenase OS=Momordica charantia OX=3673 GN=LOC111005072 PE=3 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 9.4e-22 Identity = 56/90 (62.22%), Postives = 71/90 (78.89%), Query Frame = 0
BLAST of CmaCh01G013840 vs. ExPASy TrEMBL
Match: A0A6J1IN52 (Aldehyde dehydrogenase OS=Cucurbita maxima OX=3661 GN=LOC111477051 PE=3 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 4.6e-21 Identity = 55/87 (63.22%), Postives = 69/87 (79.31%), Query Frame = 0
BLAST of CmaCh01G013840 vs. ExPASy TrEMBL
Match: A0A6J1F6P3 (Aldehyde dehydrogenase OS=Cucurbita moschata OX=3662 GN=LOC111442827 PE=3 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 6.1e-21 Identity = 55/87 (63.22%), Postives = 70/87 (80.46%), Query Frame = 0
BLAST of CmaCh01G013840 vs. NCBI nr
Match: XP_022980978.1 (aldehyde dehydrogenase family 3 member H1-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 144.4 bits (363), Expect = 4.6e-31 Identity = 76/90 (84.44%), Postives = 81/90 (90.00%), Query Frame = 0
BLAST of CmaCh01G013840 vs. NCBI nr
Match: KAG6608045.1 (Aldehyde dehydrogenase family 3 member H1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 136.3 bits (342), Expect = 1.2e-28 Identity = 72/90 (80.00%), Postives = 79/90 (87.78%), Query Frame = 0
BLAST of CmaCh01G013840 vs. NCBI nr
Match: XP_022941485.1 (aldehyde dehydrogenase family 3 member H1-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 136.3 bits (342), Expect = 1.2e-28 Identity = 72/90 (80.00%), Postives = 79/90 (87.78%), Query Frame = 0
BLAST of CmaCh01G013840 vs. NCBI nr
Match: XP_023525804.1 (aldehyde dehydrogenase family 3 member H1-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 135.6 bits (340), Expect = 2.1e-28 Identity = 72/90 (80.00%), Postives = 78/90 (86.67%), Query Frame = 0
BLAST of CmaCh01G013840 vs. NCBI nr
Match: KAG7031674.1 (Aldehyde dehydrogenase family 3 member H1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 132.1 bits (331), Expect = 2.4e-27 Identity = 67/72 (93.06%), Postives = 69/72 (95.83%), Query Frame = 0
BLAST of CmaCh01G013840 vs. TAIR 10
Match: AT4G34240.2 (aldehyde dehydrogenase 3I1 ) HSP 1 Score: 64.3 bits (155), Expect = 5.6e-11 Identity = 28/70 (40.00%), Postives = 48/70 (68.57%), Query Frame = 0
BLAST of CmaCh01G013840 vs. TAIR 10
Match: AT4G34240.1 (aldehyde dehydrogenase 3I1 ) HSP 1 Score: 64.3 bits (155), Expect = 5.6e-11 Identity = 28/70 (40.00%), Postives = 48/70 (68.57%), Query Frame = 0
BLAST of CmaCh01G013840 vs. TAIR 10
Match: AT1G44170.1 (aldehyde dehydrogenase 3H1 ) HSP 1 Score: 58.9 bits (141), Expect = 2.4e-09 Identity = 28/68 (41.18%), Postives = 42/68 (61.76%), Query Frame = 0
BLAST of CmaCh01G013840 vs. TAIR 10
Match: AT1G44170.2 (aldehyde dehydrogenase 3H1 ) HSP 1 Score: 58.9 bits (141), Expect = 2.4e-09 Identity = 28/68 (41.18%), Postives = 42/68 (61.76%), Query Frame = 0
BLAST of CmaCh01G013840 vs. TAIR 10
Match: AT4G36250.1 (aldehyde dehydrogenase 3F1 ) HSP 1 Score: 42.0 bits (97), Expect = 3.0e-04 Identity = 20/62 (32.26%), Postives = 35/62 (56.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|