CmaCh01G013570 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATTTCACAAAAGACTTCGAGACGAAGAATCGCGAAGAAGCATAGTAACGTTTCTCCAAATTAAGCTCAGCGGAAAAACCCTAATCGTCAAGATCGCTGCGAGTTACAGAGTTTGATTCTTCTAATTTCAGTTTCACTTCACGTTTCTCTGTTATTTAACATCCATCTCGAGGTTTTGAGGTTTTCTTAATCGATGGCGACTGAATCTGCTTCCGAAGTTTCTGCTATTCCCGTGGGATCATTCATCGGGAGCACGATAAGTTTGATTTCGAAATGTGAGATTCGTTACGAAGGCATTCTCTACCACCTCAACATTCAAGAGTGTACCATCGGCCTGGCGAATGGTATGTAGGAAATCGTGATTTTCTTACCGCTCTTCGCTTCCAGTGCTATAGCTATCTCCATGGCTCTGTTTATTCTGATTGTAATTTGAATTCCGGCGTTTACATGTTTGAATTTATGTAATAAATATTTTCTCTATAATGTTCGGAAATTTGTCTATACCAGTCGCTATTGGCACATGTATGGTCATTACTTGTTAGTAGAATAGTTGGTATTATAGACGGAGATAATATTACTTAGACACAGACGATTCTATTCCGGTCACTGCCAGTAAACGCCGATGCTTATTATTGTTTTTTAATTTTTTACTCTAAAACTTCATTACTTCTTGGTTTTCCATATATATATATATTTGGTGTAGTCATTGACAAGTATGATCAGTTTTATGTACTTCATTTCGGGTTTTGTTAGCAACGCCTGCTTCCCATTGAATAAGGATTTATTTTGGCAAATTTCTTAAGATTAGTAGTTATGGTCAACCACTATATATGTTAGAACGATATTCAATACTTAAATATTAAGAGTCGCATCATTTGTTGTTACAGTTAGATCTTATGGGACAGAAGGACGAAAGATCGATGGTCCACAGATCCTTCCGAGTGATGAGGTGTATGAGTATATTCTGTTTCGAGGCAGTGACATCAAGGTAACACAGATGCGTTTAATTACATTTCCATCTCATCGCTCCCCCAATAGACCAATGCACTATGATTGTATTTGGTTTAGAGCTTTAAAATTTAAAATATAACGTTGCCTTGTTTTAGTATAGATCACTTTTCTCCTCCTCGCCACATTTAAATTTTCAGAAAGGTGTGTATAGAACAGAGACAAGAAACATGGAATAAGATGCATATCTTCAAAGATTGACCTTTGAAAGCAATAGAATTTATGACATCTTTCTCTTCTAACTTTAGTAAATAAGTCCTGATACAACATTAAAAAAGGTTCCTGCATCCCCCAAGTTTCTCCTCCTACCTTTTTGAGTTTGTATCTTAAGGTAGAGCTCTAGGAACCACTCAGGGGTGCCAAACTGTTCTTAGGTCGTGAAATCACGCTCCCGTTTATTTCTCACTTAGAACTTTCAATGTCAGCTAGGATAATGATTTTTCTGTTGTAAAAAAAAATCAAAACTAACCCTGCATGCTGTAAGGGGTATGTGCACATTTGCTATACATTTTCTTAACTAAAACTACTCGATATAGTTTGGGTCCATTTTAGAAAGGGTTTTTTTTATTTTTTATTTTGTTATAACAGGATTTGCAACTCAAGTCCCCCTCATTTTCTGAGACGGACAAGCAGATTCATGATGGCTCTGTGATCCAGGTACTCTTGTTTGACTATTATTATAGAAAGATATTAGCACAATTTTACATGAAAAAGAAAATCTCATGTACCTTTCCCTATGCAGTCGAAGCATGCTGGGGTCTCAAACTCACCACTGTATCCTTCAGTTGGATGTGAAACATTGACGGTCTCAAATCAGTGCCAGGATTCTCTGGCTTTTAACAATGGACAGTGTCCAAGCAAGGTGTCTTCACATCAATCTGTTGCTGCAGGTAACATTATACATAGTTATTCGTTGCCCATACAAAACTGTCATTTTCTGTACCAAGCAGCAGTTAGAGAAGAAAAAGGAAAACAATGGGGAATCCCTTTGTACCAGTTTCTGAAGTACATTGCCATTTCAATTGGCAACAGAGAACCAATGGAATCTTCAAAATCATTTAAATATTGGCTTATGATTTACTGAAAACTTAGAATTGTGCAGGTGCTGATCCTGTATCATTTCTACTTTTTGCACGTCCTAGTTTTTATCAGCTAATAGATAGTTCACAACCATGTTTTGTTTTGTTCACCATCTCATTCAACAGTGATGACATCTACTTCTTCCTTTCCTTCAGTCTGGCAAGAAATTGGAAATAACAAAGCTCAGATTACGGGTAAACCTATATTCCACCCAACATCAATTCTTTCCAGGCAGTCTGTTCTGAATACTGCACCTTCTATTTCGGGTTCCGGTCCATTGCTTACATTGCCTGCACCTTCATTAACTCCTTATCAATTATCACAGTCTGGGGCAGAAGTACTTTCCTCCACAAAGAAACTGTGTGTTGATGCAAGGAACTTGGGTGCTTCTACACATATTTCTTCTAATTCTTCAATATCAATTGCTGCGGTTGAACATCAAGCACCCTCGTTTCCATCTCTGAGAGAGATGCCTGCTCAACAGGTTTTTACCTTTATAAAGTTTTCTAAATTATTTTTTCATATAATTACTTCCTTGTAGTTCACATCATTTGGTCTATTTATTTTGTATAACTTGTTGATTTATGCTGAACAGTAAGTGGTTTTGAGCTCAATATTGAATAGTGTTTTCTTCTTCTCGAATAATTAGTATTCAGTAGTTGGTGATATTCTTGGTAATAACCTGAAAGTTACAATGTGGTTCCATGGATCTCACTGAAAATGTCTCATGTTTCTTATGGCTTTTTTTATGACTTTAAAATCAGCCCTCTTCTAGCCAAAATCTTGCCTCTAGACCTATCGTTATCAAAAAAATTAGTTATGGAGACAACCTTTAATCCAACGTCTACATCAAAACCTTTCAACTCCATAATCAAGTCTAGGAAATGCCACTCAACTTTAACATAAGCTTTTTCAAGGTCTAACTTTAGAATAAAGCCTCTTGTCCAAGGTCTCCGATTCAACTACGATAGCATTCAAAATCTGTCACCACATCCACAAAGTCAGCATGGCAATTGCTAATTGTAACAGCCATCGCTTTCTTCAACCTCTCTGCTGGGACTTCAGGAATAATTTTGTAGAGAGAAGTGACCAGGCTAATTGGGTGGAAGTCACTCACCCTAGAAGCTTTCTTCTTCTTGTGGATCAAACAAATGCAAGTCTCATTGGTCTTATTAAAAAAAAAAAGTCATTTTCAATAAACTCCTGGAACACTCCTACTAAATCAGCCTTCAAGATGTTTCAAATTTTTTTTTATGTAAAAGTCGCCTGTCATACCACCTGGCCCTCTGGCCCTGGAGATTTAAGGCATTGAACTGCTTTAAGGATTTCTTCCTCAAGAAAGGGACTTTCCGGTGAAGTCTGACACTGAGCTTCTAACGGCACCCAATCAATCCCAACAAGAGTGAATCTCAGGCCCTCTTTGCAATAAAGCCTCTGGAAGAATCCAATACTTTCATCTTAAATTCCTTCTCTGAGGATAAAAAATCCCGTTTTCTCCTGATAAAGTAGAAATAACGCTTTGATAAAAGAATGTGCTCTCATCGCCTTCTTTAAGCCATTTAATCTTTTGCATTCCTGATCAAATAAGCGCTGCTTCTTAATAGTAAAATCCATCAGCTTGGCTTTTATAGAGATTCTAGCGGCCCTTTGACATCTGATAATTTGATAATACATTGTACTTAAAGAACTTGAACCAAAATGATAAAATTATAAAAGCACTACGCAATCATAGGATCTAAAGTAAATCTTTGAAAAGATGATACTTCAGATGTGCAAGGGTACCATTGAGTGGAAAGCCTTCTTCTTTAGTGTTGAGGATTATTGAAAGGAGTAGTCTCACGTTGGCTAATTAAGAGGAAGATCATGGGTTTATAAGTAGGGAACATCATCTTCATTGGTATGAAGGCTTTTGAGGAAATCAAAAGTAAAGTCACGAGAGCTTATGCTCAAAGTGAACAATATCATACTATTGGAGGTCCTAGATTTTTAACATTTGCCTCTAGTCACATATAGGGGTTAAACTTGAACTGCATTATCGTTGAAAATTTTATCACCAGGCATGAAAGACGTGCAAGCATTTCTTTCTATCATAATATAATACTTCTTCTGCGCTCCCATCCCGTTTTAATTCCTTGTATCTTGCTTCTTTGAATATGGACTACTGTTTGCCACCAAGAACTTTAAATTCCAGATTCTAGATCATTATGGACATAGTTGTTCACTGAAGAATTTGATTATCAATACTCTTCAAATTGTAGTTCACTGAAGAATTTGATTTTCAAGCCATGAACGAGAAGTTCAAGAAGGACGAGGAAGAGAGACATTGGGCGATACCTAGAGCTAAGGTATGGGTTGGATTAGTTAGTAAAGTCAATACATTTCATTCTTTATATTGGTATTAATCAATTTCCTCCTCTTGGGTTTCTTTTTGCAGCCTGCATATAACAAGGATGAATTCTTCGATACAATTTCCTGCAATTCTCTTGAACGTGGATCAAGGAATGGACACAGCCGTTTCTCTATGCCAATGAAATTTGACTCCGAGGTATTCTCTTGTTCTGTTTTTCTTGTACATTTCTGTTCTGATAGCTGATAAGTTGAACAGTTCCTTAGAAATAAAGCGGGATTTTGCAGACAAGCGGAGGCCTTCCACATATGGGCGGCAATGTTGGGTATGGCGTTAGACGCGGTGAGAATTTCTGGGGCTCAAATAACTTGGGACAGGGATACAATTAATGGTGGTTGAGGGCTTGAAGGGAGCATGCCATTCTGAATTCTTAGCCTCTTGTTTGTGTGGCCCTACTGCTATTGAATTGACATATGCACACATCTCCTTGTAATTATTTCCTTCACCACCTTCACCTGGTGCACTTTGGGTTGGGTAGACTTTTGTAACTTATATATTTGATGCATGCATGATTTTTATGTATATTTATGAAAAAAAAAAAAATCTGCTTTTGTGGTTTATTCA TATTTCACAAAAGACTTCGAGACGAAGAATCGCGAAGAAGCATAGTAACGTTTCTCCAAATTAAGCTCAGCGGAAAAACCCTAATCGTCAAGATCGCTGCGAGTTACAGAGTTTGATTCTTCTAATTTCAGTTTCACTTCACGTTTCTCTGTTATTTAACATCCATCTCGAGGTTTTGAGGTTTTCTTAATCGATGGCGACTGAATCTGCTTCCGAAGTTTCTGCTATTCCCGTGGGATCATTCATCGGGAGCACGATAAGTTTGATTTCGAAATGTGAGATTCGTTACGAAGGCATTCTCTACCACCTCAACATTCAAGAGTGTACCATCGGCCTGGCGAATGTTAGATCTTATGGGACAGAAGGACGAAAGATCGATGGTCCACAGATCCTTCCGAGTGATGAGGTGTATGAGTATATTCTGTTTCGAGGCAGTGACATCAAGGATTTGCAACTCAAGTCCCCCTCATTTTCTGAGACGGACAAGCAGATTCATGATGGCTCTGTGATCCAGTCGAAGCATGCTGGGGTCTCAAACTCACCACTGTATCCTTCAGTTGGATGTGAAACATTGACGGTCTCAAATCAGTGCCAGGATTCTCTGGCTTTTAACAATGGACAGTGTCCAAGCAAGGTGTCTTCACATCAATCTGTTGCTGCAGTCTGGCAAGAAATTGGAAATAACAAAGCTCAGATTACGGGTAAACCTATATTCCACCCAACATCAATTCTTTCCAGGCAGTCTGTTCTGAATACTGCACCTTCTATTTCGGGTTCCGGTCCATTGCTTACATTGCCTGCACCTTCATTAACTCCTTATCAATTATCACAGTCTGGGGCAGAAGTACTTTCCTCCACAAAGAAACTGTGTGTTGATGCAAGGAACTTGGGTGCTTCTACACATATTTCTTCTAATTCTTCAATATCAATTGCTGCGGTTGAACATCAAGCACCCTCGTTTCCATCTCTGAGAGAGATGCCTGCTCAACAGTTCACTGAAGAATTTGATTTTCAAGCCATGAACGAGAAGTTCAAGAAGGACGAGGAAGAGAGACATTGGGCGATACCTAGAGCTAAGCCTGCATATAACAAGGATGAATTCTTCGATACAATTTCCTGCAATTCTCTTGAACGTGGATCAAGGAATGGACACAGCCGTTTCTCTATGCCAATGAAATTTGACTCCGAGACAAGCGGAGGCCTTCCACATATGGGCGGCAATGTTGGGTATGGCGTTAGACGCGGTGAGAATTTCTGGGGCTCAAATAACTTGGGACAGGGATACAATTAATGGTGGTTGAGGGCTTGAAGGGAGCATGCCATTCTGAATTCTTAGCCTCTTGTTTGTGTGGCCCTACTGCTATTGAATTGACATATGCACACATCTCCTTGTAATTATTTCCTTCACCACCTTCACCTGGTGCACTTTGGGTTGGGTAGACTTTTGTAACTTATATATTTGATGCATGCATGATTTTTATGTATATTTATGAAAAAAAAAAAAATCTGCTTTTGTGGTTTATTCA ATGGCGACTGAATCTGCTTCCGAAGTTTCTGCTATTCCCGTGGGATCATTCATCGGGAGCACGATAAGTTTGATTTCGAAATGTGAGATTCGTTACGAAGGCATTCTCTACCACCTCAACATTCAAGAGTGTACCATCGGCCTGGCGAATGTTAGATCTTATGGGACAGAAGGACGAAAGATCGATGGTCCACAGATCCTTCCGAGTGATGAGGTGTATGAGTATATTCTGTTTCGAGGCAGTGACATCAAGGATTTGCAACTCAAGTCCCCCTCATTTTCTGAGACGGACAAGCAGATTCATGATGGCTCTGTGATCCAGTCGAAGCATGCTGGGGTCTCAAACTCACCACTGTATCCTTCAGTTGGATGTGAAACATTGACGGTCTCAAATCAGTGCCAGGATTCTCTGGCTTTTAACAATGGACAGTGTCCAAGCAAGGTGTCTTCACATCAATCTGTTGCTGCAGTCTGGCAAGAAATTGGAAATAACAAAGCTCAGATTACGGGTAAACCTATATTCCACCCAACATCAATTCTTTCCAGGCAGTCTGTTCTGAATACTGCACCTTCTATTTCGGGTTCCGGTCCATTGCTTACATTGCCTGCACCTTCATTAACTCCTTATCAATTATCACAGTCTGGGGCAGAAGTACTTTCCTCCACAAAGAAACTGTGTGTTGATGCAAGGAACTTGGGTGCTTCTACACATATTTCTTCTAATTCTTCAATATCAATTGCTGCGGTTGAACATCAAGCACCCTCGTTTCCATCTCTGAGAGAGATGCCTGCTCAACAGTTCACTGAAGAATTTGATTTTCAAGCCATGAACGAGAAGTTCAAGAAGGACGAGGAAGAGAGACATTGGGCGATACCTAGAGCTAAGCCTGCATATAACAAGGATGAATTCTTCGATACAATTTCCTGCAATTCTCTTGAACGTGGATCAAGGAATGGACACAGCCGTTTCTCTATGCCAATGAAATTTGACTCCGAGACAAGCGGAGGCCTTCCACATATGGGCGGCAATGTTGGGTATGGCGTTAGACGCGGTGAGAATTTCTGGGGCTCAAATAACTTGGGACAGGGATACAATTAA MATESASEVSAIPVGSFIGSTISLISKCEIRYEGILYHLNIQECTIGLANVRSYGTEGRKIDGPQILPSDEVYEYILFRGSDIKDLQLKSPSFSETDKQIHDGSVIQSKHAGVSNSPLYPSVGCETLTVSNQCQDSLAFNNGQCPSKVSSHQSVAAVWQEIGNNKAQITGKPIFHPTSILSRQSVLNTAPSISGSGPLLTLPAPSLTPYQLSQSGAEVLSSTKKLCVDARNLGASTHISSNSSISIAAVEHQAPSFPSLREMPAQQFTEEFDFQAMNEKFKKDEEERHWAIPRAKPAYNKDEFFDTISCNSLERGSRNGHSRFSMPMKFDSETSGGLPHMGGNVGYGVRRGENFWGSNNLGQGYN Homology
BLAST of CmaCh01G013570 vs. ExPASy Swiss-Prot
Match: Q9FH77 (Decapping 5-like protein OS=Arabidopsis thaliana OX=3702 GN=DCP5-L PE=2 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 4.7e-32 Identity = 148/485 (30.52%), Postives = 194/485 (40.00%), Query Frame = 0
BLAST of CmaCh01G013570 vs. ExPASy Swiss-Prot
Match: Q9C658 (Protein decapping 5 OS=Arabidopsis thaliana OX=3702 GN=DCP5 PE=1 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 6.7e-31 Identity = 167/589 (28.35%), Postives = 218/589 (37.01%), Query Frame = 0
BLAST of CmaCh01G013570 vs. ExPASy Swiss-Prot
Match: Q8K2F8 (Protein LSM14 homolog A OS=Mus musculus OX=10090 GN=Lsm14a PE=1 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 2.0e-19 Identity = 56/107 (52.34%), Postives = 71/107 (66.36%), Query Frame = 0
BLAST of CmaCh01G013570 vs. ExPASy Swiss-Prot
Match: Q8AVJ2 (Protein LSM14 homolog A-B OS=Xenopus laevis OX=8355 GN=lsm14a-b PE=2 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 3.5e-19 Identity = 55/106 (51.89%), Postives = 71/106 (66.98%), Query Frame = 0
BLAST of CmaCh01G013570 vs. ExPASy Swiss-Prot
Match: Q6NVR8 (Protein LSM14 homolog A OS=Xenopus tropicalis OX=8364 GN=lsm14a PE=2 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 3.5e-19 Identity = 55/106 (51.89%), Postives = 71/106 (66.98%), Query Frame = 0
BLAST of CmaCh01G013570 vs. ExPASy TrEMBL
Match: A0A6J1IUN0 (protein decapping 5-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111480744 PE=4 SV=1) HSP 1 Score: 715.7 bits (1846), Expect = 9.9e-203 Identity = 365/375 (97.33%), Postives = 365/375 (97.33%), Query Frame = 0
BLAST of CmaCh01G013570 vs. ExPASy TrEMBL
Match: A0A6J1IX70 (protein decapping 5-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480744 PE=4 SV=1) HSP 1 Score: 693.7 bits (1789), Expect = 4.0e-196 Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 0
BLAST of CmaCh01G013570 vs. ExPASy TrEMBL
Match: A0A6J1J095 (protein decapping 5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480744 PE=4 SV=1) HSP 1 Score: 685.6 bits (1768), Expect = 1.1e-193 Identity = 351/361 (97.23%), Postives = 351/361 (97.23%), Query Frame = 0
BLAST of CmaCh01G013570 vs. ExPASy TrEMBL
Match: A0A6J1FJW7 (protein decapping 5-like OS=Cucurbita moschata OX=3662 GN=LOC111446404 PE=4 SV=1) HSP 1 Score: 670.6 bits (1729), Expect = 3.7e-189 Identity = 346/375 (92.27%), Postives = 350/375 (93.33%), Query Frame = 0
BLAST of CmaCh01G013570 vs. ExPASy TrEMBL
Match: A0A6J1C9M0 (protein decapping 5-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009654 PE=4 SV=1) HSP 1 Score: 495.7 bits (1275), Expect = 1.6e-136 Identity = 274/411 (66.67%), Postives = 308/411 (74.94%), Query Frame = 0
BLAST of CmaCh01G013570 vs. NCBI nr
Match: XP_022981672.1 (protein decapping 5-like isoform X3 [Cucurbita maxima]) HSP 1 Score: 715.7 bits (1846), Expect = 2.0e-202 Identity = 365/375 (97.33%), Postives = 365/375 (97.33%), Query Frame = 0
BLAST of CmaCh01G013570 vs. NCBI nr
Match: XP_022981671.1 (protein decapping 5-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 693.7 bits (1789), Expect = 8.3e-196 Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 0
BLAST of CmaCh01G013570 vs. NCBI nr
Match: XP_022981670.1 (protein decapping 5-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 685.6 bits (1768), Expect = 2.3e-193 Identity = 351/361 (97.23%), Postives = 351/361 (97.23%), Query Frame = 0
BLAST of CmaCh01G013570 vs. NCBI nr
Match: XP_023523871.1 (protein decapping 5-like isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 676.0 bits (1743), Expect = 1.8e-190 Identity = 347/375 (92.53%), Postives = 353/375 (94.13%), Query Frame = 0
BLAST of CmaCh01G013570 vs. NCBI nr
Match: XP_022940986.1 (protein decapping 5-like [Cucurbita moschata]) HSP 1 Score: 670.6 bits (1729), Expect = 7.5e-189 Identity = 346/375 (92.27%), Postives = 350/375 (93.33%), Query Frame = 0
BLAST of CmaCh01G013570 vs. TAIR 10
Match: AT5G45330.1 (decapping 5-like ) HSP 1 Score: 140.2 bits (352), Expect = 3.3e-33 Identity = 148/485 (30.52%), Postives = 194/485 (40.00%), Query Frame = 0
BLAST of CmaCh01G013570 vs. TAIR 10
Match: AT1G26110.2 (decapping 5 ) HSP 1 Score: 137.1 bits (344), Expect = 2.8e-32 Identity = 165/583 (28.30%), Postives = 219/583 (37.56%), Query Frame = 0
BLAST of CmaCh01G013570 vs. TAIR 10
Match: AT1G26110.1 (decapping 5 ) HSP 1 Score: 136.3 bits (342), Expect = 4.8e-32 Identity = 167/589 (28.35%), Postives = 218/589 (37.01%), Query Frame = 0
BLAST of CmaCh01G013570 vs. TAIR 10
Match: AT4G19360.1 (SCD6 protein-related ) HSP 1 Score: 90.5 bits (223), Expect = 3.0e-18 Identity = 42/82 (51.22%), Postives = 61/82 (74.39%), Query Frame = 0
BLAST of CmaCh01G013570 vs. TAIR 10
Match: AT4G19360.2 (SCD6 protein-related ) HSP 1 Score: 90.5 bits (223), Expect = 3.0e-18 Identity = 42/82 (51.22%), Postives = 61/82 (74.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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