CmaCh01G013000 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh01G013000
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr01: 9306233 .. 9312347 (+)
RNA-Seq Expression	CmaCh01G013000
Synteny	CmaCh01G013000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAATTAAAAAAAAAAAAAAAGAATTTGTTTTCAAAAAGACTAAAATAACCTTCTGACTCGGTCGACCTCCACTAGTGAGGTTTAGGGTTCTGATAGCCACTATAAATGAGAAAGGTGCCTACAACTTTATCGTTTCAGTTCATACAATTCATCGACGAAGAGAGGATAAAGATCGACCTGCCATTGTTTTTCTGAGACAAAGCTCGAGTTTGGTCTCCATCGACAATGAGAGCCAAGGTTCATCTTCCTAATTTTCTTCATCTTTTGTTATCACTGTTTCCTATTCTTTCATTTTTCTCAATTTTTTGTGTATGCTTTGAGGATTTAGTTGTTTTTGCCTCGATTGGAGTCGGAAAGTGTGACCGAAGTTTTGTCAGGTTTGGTAACTGGATGCATTTTCATAGCTGTGTTCGTTATTCTCACTCTTTGCGAGTCGGAAACTAATGTTTGTAGGGTTTATAACTTTGGAAACGGGATTAGGGTTTTTTGCTATTATTTTTGGATGTACTTTCCTATTTGTGTTTGTTCCTCCATGCTCCTGAATCTTAAGTTACTTGTCATTGTTCGCATACCGGTTGGGATTTCTTACTTTTTTTTTTCTTTTTCTTTTTTTTATTTGATCAAACGTTATCGATAGTTCTATTGATTTTCAGTTTAAACCATAGGGGTATGTTATCCACTGGAGGCCGGAATACTGTTGTAGGTTTAGTATTCCTGACCAAGATTAAGATTGTAACGGCTTACCCCAAGCCCCACTACTAGCAGATATTGTCTGCTTTGAGCTTTCCCTTTCGGGCTTCCCCTCCGCTTTAAAACTAGTCTTCAAGGAGAAGGTTTCCACAACCTTATAAAGTGTTTTGTTCTTCTCCCCAACCAACATGAGACATCACAATCAACCCCCTTCAGGCCCAATGTCCTCGCTAGAACTCGTTCCTTTCTCAATTGATGTGGGACCCTGACCGAATCCACCCCTTTGGGGCCCAACGTCCTTACTGACACATTGCCTCGTGTCCACCCCCTTTGGGAATAGTGAGAAGGCTGACACATCGTCCGGTGTCTAGCTCTGATACCATTTGTAACGACCCTAGCCCAAGCCCACCGCTAGCAGATATTGTCTCTTTGGGCTTCCCCTTAAGGCTTTAAAACTTGTATGCTAGGGGAAGGTTTCCACAATCTTTTAGGGTGTTTTGTTCTCCTCCCCCAACCAATGTGAGACATCACAAAAATTGTGACGTAAAAAGGTTTTAGATTATCTAAATAGTATTTATAAGTCTTTGAAGCGACGAAGTTGTGTAGCATTTCAGTGTCGAGAGCTTATTTTTCAAGCACCGTTCGATACTCTTTTTCATAAGTTTATCGGTTTTTGATAATTACCTCACAATGATATTTATCTTTCTTGAATTCATGGTCAAATTCCAAACACAAAAACAAGCTTGTAAAAACTATTTTTTCACTCGTGGGTGGGGTGGGAGTAGTGCATTCAAACGCCAAAAACTTTTGGGCCCCCTAGTTTTTTGGTGAACATTTTGTTTACTTTGTTGGGACTGATTTATATGCATTTTTTTTCCTTTTGCTTTCAACTTGAGGCTTATATATTGGAATAACATTCATTGTTATCACCCACCACTGCGTGGAAATTGAGGTTTATAGTTTTTTGGTTCTGAATTCTTCTTTGATTTGCATTCTTCTTTTTCTTGTCTCGTGTCTAAAAGAATTCTTACTTGTGTCTTTTTGGGGGTGGTTCTGAATGCCAGTGGAAGAAGAAGCGTATGAGGAGGCTTAAGAGAAAGCGCCGAAAGATGAGACAGAGGTCGAAGTAGTTGGCAGATTTCTGGAAAATGATCAAGCTTTCTCCTGAGACTGTTTATGGTCTCCATCGCTGTCTAGCATGAACTGCTTGAAGTCGTGGAGGTTGTAGTAGGGTTCTTACGAAGATAGTTTTGCACCATTTCCTGTGGTTTTTATTACTTTGGATAAACTTCTATAACTTGACTTGTTTTCCGTTTAAGATGTGTGTTATAACATATATTATGCATGCATGTAGTGCTTTTCTTGAACTCGGGTTCAGAAATTTTCAATGGTTAAGCTTAATTTGGCTTGGTATCTGCTGAATATTTTACCTGCAGACATAGTAGTGATTCCTCAGTTAGAAAGATCCAGCTAGCTTTAGTCTTAAAATGTTATTTTGCTCCGTCTGGTTTGAGTATTATAATTGAGTTGTTAAAAGGGACACCATTTTTTTAAGAAGAGTTAGCCGTTGGTAGCAGAGTTGGTAGCAGAGGTGCTGCTCACGTTGTGAAGACACTGCAACTGAGCACTCAACCCTCTCCTAGGATTCTCTTAGCTAATCAGTTTGGCATTACACTGAATTACATATAGAGGGGCGAAGCTGTAAAACCGAGTGAAAGAAGCGAGAGGAAAATAGCTTACCGAGTGTTGAGAGGAAGATCATAGAGTGCGGTCAGGGGTTGAATGTTGTTTATCCAAGTGATATCCTACCAAATGGCTCGATGAGTAGTGTACCGACCACGTGAACAGGCTTGGCACTAAGAAAGATCAGGTGTTTTGTATGTTGACCCCTAACAAATGTCTAGACTTGACATGCATGAGAAAAGAATCTTAAACCAACCCCACAATTTGTGTTGATAGTCATGTTCGAGAAGATAACTGGCGTTTGAGAAGATCAAGAATTTTGAACAAACTCCAACAAAGAAAAAGATTGCTACAGATGTGATGTCTCTCGATCAATCTTTAATATGTTTCTCGAACATTATTTGAGTCATAATAATTACATTTAGTCGTATCTATTATGTGAGGGTAAGTTATTGTTTTTTAGTCGTATCTATTATGTGAGGGTGAGTTATTGTTTTTTTAGACGACTTTATCGATTATATTTCAATGCATTTCAATGTTGAGGGTATATAAGTCAAGTAAGATGTAAGCGATGAGAGATGGGACAGGCAACAAGATAGAGATGAAAAAGGATTGAATATGTGAGAATGAATCTTTCCTCTTGACTTTGAAACACTTGATTTTGAACTACCTTATCTAGTAATCAACATTCCCTTTCCCTACCTCTTGTCATTGCCATTTTATTGATTGACCGATAAGATTGGTATGGAGCCACACAGGAGAAAGTCGCACTTGGTAGCTCATAAGTTTCTAGCTAAATGTCTTTTTTTCTTTCTTTCAAGTACATGAATTCACCTTCCTTCCCACTAATCTTTTGCTGGACTTGTAGATTACTCTGGGCTAATGTTAAATTCTCTTCTAAGATCTTCTCACAAGGCAGTAAGAGGAGGAAAAGTTAGGGGATTTTCTGGATATTGTATACTTTTGTAGGCCTCTCATCGGAACGTGTTTGGTTTTGGTTAGAGCGACCAGTTTTCTCCATTCGATATCTTTTTCTTTTCGATGTGCAGGCTATTTTGGTCATGTTTCATGAAAGGCATTTACTATTTGGGTTTGAAAGTTTGAACAACTAGAGTATGCTCATCATCAGAGATACAACTAATTATGTAAAAGACTAAAATGTCTTAGTCCTATTTATCACGAGCTTAGATTCTTCCATTCCCTCACTCTTTCATCTTGAGATTTAAGATCATACAAAACAGCTTCGTTAAAGGCAAGATCTAGAGAAGTAAAAAACTCAGTATATAGTGATGGGCACCAGAACATTGGCATAAAGATCTTCCTTCAACTACCATATTTTATGTTCGAACGGATTGTCCCCCAGTCGGGCAAAGAAAAAATGAATGGGAATAAAGGAATTAGCTGGAGTTATTTCATGTACACAACAGCAGCCTAATCAACAAACATGTAATCAGTTGAAAATTATGCAACTCAAAAAAAGCAATATCATCTTGTACAGATTCACAGGCTTCCAGTTCTAAGACAAAGTAAAAAGCTCAAAGAACATATTGCATCAGATAAATGTGGAATTTTTCTTTTCATACCAGAAAGTACTTTGTTGTCTTGTTGATGAACTTTCAGCAATGTTTGTTGTTGCTCTAGCAAGTCATCTGAAACTATCACAATGGTAATTCATTTAGGTCATACTGCATAACAAGTCTTTCCACTGTGCTTTGACTTATAACATCCTTGAGTTGCAACTCCCTCAGGACTTTGGTTGCTAGATCTATCTGTTTCTCGTGGACGATCCCTTCCACGAGAGTGGTATATGTTGTTTCATTGGGCAGGTAACCTTTATCAACCATTGTTACATAAACCTCTAAGGCCAAATCGGATCTTCGAGATTTGCAACAACCAAAAATGAGAGAATTGTAATTTTCAGTATCAGGCTTATAGTTATTTTCCTCCATTACACTGAATATTTCAATTGCCTCATCAAGCATGCCCTCCATGCATAACCCCCGGATCAAAGACGAATAGGCAAAAGAATTGGGAGTAAACCCGTACTTCGTCATTTCATAGAGAAGTTGGAATGCTGAATATGTGTTTCCCTTTCGACACAAGCTCGTAATAACAGATTTATAGAATTCTTGAGTAGAATAATGTTGCTTGTTGCCCAAACTTTGGATGATGGAGAATGCCTCTTGAACCATTCCCACTTCACAAAGTGTAGCAATGGCATTGTAAGTTCCTTCATTGGGATTACAATGCCTATAGATCATTTGGTCCAAACATTTCACAACAAGATCTACTTTCTTATCTCTACAAAGACGAGCAATTATCGGGTTGTAGCTTGAAGCCGTGGGCTTGAACCGTGCTCTAATCATCTCTTCCAAAACCTCAAGGGCATGTTCTGTTCGGCCATGAAAGGCAAGCGAACCAATCAATGTATTGTAAGTGACAGCCGAAGGGGCACGATCATCACCGTCCATTTCAGCTAGAAGCACATTTGCCTCCTCCCATCTCCCTTCATAGCATAGACTCCTTAGCAAGATATTATAACTGACAACATTTGGATTGAATCCCTTTGAAGGCAATTCTCTAAATAACTGGATGGCATCATCTGTCCTACCTTCTTTACACAACCCAGTTAATAAAACATTGTAGCTAACCAAATTAGGCTTCCCACCCTTGGCAATGATCTCATCCAAAAGCTTAACAGCTTCATCCGCTCCCCGTTCCTTGTATGCAGCTTCAAGCAAAAAAGAGTATGTGTATGCATTTGGGACAAGCCCCTTCTGGATTAATCTGTCTAAAAGTTGCAAGCTGTGAGTCAAATTCCCATGCATACAAAGACCTCTCACAAGAGAATTATAAGTAACAGTGTTCGTAGGATAACCATATTCCTCCATTCTGTCCACTAATTGCATTGCATAACCAACATTCCCTCTTTTACACAAAGAACTTACCAAAAAGGTATAAGAAGAAGCATCTGGAATGATTCCAGAGCCAATCATCATCTCCATTACCTTAATAGCTCTTCTAAGCTTACTGGCCTTGCAAAGATCATACAAAAGCTGAGTCGCTTGAAACACATCGGGCTTTTGGCCCTTCCCTACCAAATACTCTAAATTCAAAAAAGCATCATTAAGTCTATGTTCTCTATTCTTTTGATCGCCCTTCCCAATCCTCCAGTTTGGCAGTGTGAAAATGGTATCCTTAGGAGAAATGGTAACCTGTGTCGATGCTAAAACTTTAGAAAATCCCTTGCTAAGTGAAAGCTTGTGGAGATTTGGGATATGGGAGAAGAATCCATATCCTCTTCTTGTGGTTTCTGGAGATGGATTTGTAATTGGAGACACTGTATTCAGCAGAGTCGCCATTGAAACTCAGTAAAACTAAAACCCTACTTCTTCACAGTAATCGCTCCCAAAAATCCTGTTTCTTTCTTAGCATTTAAATCCAGAATCAAAACTCTGAAATCAAATTAATCAATAACGTATTCTAAGATCTAGTATCTCTTCTTCAATCGTCTAAAATCTTGGTAGAATTCAGGATTTTTCAGAACGAACAAAAATGAAAGGATAAGCAGAGATTGCAAGTACGAAATTCAATCAATCCTCTTCGTTTTCGAAGTGAAATTTGGTAGAGAAAAGAATTATGAACATACACTGGAATTAGAAATCAATCACAGGCAATTCTTCTCTTCGTCTCCAAAACGCATTGAATCTTGGAGAGCTGAAATTCCACTATTTAGTTAG

mRNA sequence

ATAAATTAAAAAAAAAAAAAAAGAATTTGTTTTCAAAAAGACTAAAATAACCTTCTGACTCGGTCGACCTCCACTAGTGAGGTTTAGGGTTCTGATAGCCACTATAAATGAGAAAGGTGCCTACAACTTTATCGTTTCAGTTCATACAATTCATCGACGAAGAGAGGATAAAGATCGACCTGCCATTGTTTTTCTGAGACAAAGCTCGAGTTTGGTCTCCATCGACAATGAGAGCCAAGTTGTTTTTGCCTCGATTGGAGTCGGAAAGTGTGACCGAAGTTTTGTCAGGTTTGGTAACTGGATGCATTTTCATAGCTGTGTTCGTTATTCTCACTCTTTGCGAGTCGGAAACTAATAATTCTTACTTGTGTCTTTTTGGGGGTGGTTCTGAATGCCAGTGGAAGAAGAAGCGTATGAGGAGGCTTAAGAGAAAGCGCCGAAAGATGAGACAGAGGTCGAAAACGAACAAAAATGAAAGGATAAGCAGAGATTGCAAGTACGAAATTCAATCAATCCTCTTCGTTTTCGAAGTGAAATTTGGTAGAGAAAAGAATTATGAACATACACTGGAATTAGAAATCAATCACAGGCAATTCTTCTCTTCGTCTCCAAAACGCATTGAATCTTGGAGAGCTGAAATTCCACTATTTAGTTAG

Coding sequence (CDS)

ATGAGAGCCAAGTTGTTTTTGCCTCGATTGGAGTCGGAAAGTGTGACCGAAGTTTTGTCAGGTTTGGTAACTGGATGCATTTTCATAGCTGTGTTCGTTATTCTCACTCTTTGCGAGTCGGAAACTAATAATTCTTACTTGTGTCTTTTTGGGGGTGGTTCTGAATGCCAGTGGAAGAAGAAGCGTATGAGGAGGCTTAAGAGAAAGCGCCGAAAGATGAGACAGAGGTCGAAAACGAACAAAAATGAAAGGATAAGCAGAGATTGCAAGTACGAAATTCAATCAATCCTCTTCGTTTTCGAAGTGAAATTTGGTAGAGAAAAGAATTATGAACATACACTGGAATTAGAAATCAATCACAGGCAATTCTTCTCTTCGTCTCCAAAACGCATTGAATCTTGGAGAGCTGAAATTCCACTATTTAGTTAG

Protein sequence

MRAKLFLPRLESESVTEVLSGLVTGCIFIAVFVILTLCESETNNSYLCLFGGGSECQWKKKRMRRLKRKRRKMRQRSKTNKNERISRDCKYEIQSILFVFEVKFGREKNYEHTLELEINHRQFFSSSPKRIESWRAEIPLFS

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh01G013000 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh01G013000 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh01G013000 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh01G013000 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 63..83
IPR007836	Ribosomal protein L41	PFAM	PF05162	Ribosomal_L41	coord: 57..78 e-value: 5.8E-9 score: 35.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G013000.1	CmaCh01G013000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome