Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CACCAAAGTATTAACAAACAAGGCATAAATGGCTTACTCTAAAACCTTTCTCCTTCTCAGCCTCCTCCTCGCTCTTCTTTACGTCTCCTCTCATGTCTCGGCTCGTTTACTTGGTTAGTTTATGCTCGAAGCTGAGCGCTCTCTTTTTCGTTATTTGTTGAGAATATTTCGAAAAGGACAAATTTGTTTTTGTATATAGTTTTGTAGTTTATGTGGATTATTTAGTGTGGTATTAGAGGATTGGATTGTAAATTTAAGTTTGTTGTTATTTGAATTTTAGATGGATTTTTATGTTTTGGAACGAGGTTAATCTATATCATATTTTAAGTTTATATAGTTAAGTTTTTAAATTGAGGAGTAATTTATTTGATATTATTTCAACTCTGTTTTTCATTCATGTAGAGGAAAAGAAAAGTGTTGTAAAGAGTGATGACCATGATGATGATCACGACCACGGCCTTGGATACCACTATGATGGCCATGATCATGACCATGAAGATGATCATGACCACGACAAACATGACCATGATGACCACGACGATCATGACCATGATGACCACGACGATCATGACCATAATGATCATGACAAGGATGACCACGACGATCATGACCATAATGATCATGACAAGGATGACCATGACGATCATGACCACGATGATCATGACCATGATCACGATCACGACGCTGATGTCAATAGCTTGGATGATCACCATGAACAGCACGACCATGACCATGATCACGATGATGACGACCATGACCACGACCATGACCATGATCACGATGATGACGACCACGATCACGACCATGACGGCATTAAAAATTAG
mRNA sequence
CACCAAAGTATTAACAAACAAGGCATAAATGGCTTACTCTAAAACCTTTCTCCTTCTCAGCCTCCTCCTCGCTCTTCTTTACGTCTCCTCTCATGTCTCGGCTCGTTTACTTGAGGAAAAGAAAAGTGTTGTAAAGAGTGATGACCATGATGATGATCACGACCACGGCCTTGGATACCACTATGATGGCCATGATCATGACCATGAAGATGATCATGACCACGACAAACATGACCATGATGACCACGACGATCATGACCATGATGACCACGACGATCATGACCATAATGATCATGACAAGGATGACCACGACGATCATGACCATAATGATCATGACAAGGATGACCATGACGATCATGACCACGATGATCATGACCATGATCACGATCACGACGCTGATGTCAATAGCTTGGATGATCACCATGAACAGCACGACCATGACCATGATCACGATGATGACGACCATGACCACGACCATGACCATGATCACGATGATGACGACCACGATCACGACCATGACGGCATTAAAAATTAG
Coding sequence (CDS)
ATGGCTTACTCTAAAACCTTTCTCCTTCTCAGCCTCCTCCTCGCTCTTCTTTACGTCTCCTCTCATGTCTCGGCTCGTTTACTTGAGGAAAAGAAAAGTGTTGTAAAGAGTGATGACCATGATGATGATCACGACCACGGCCTTGGATACCACTATGATGGCCATGATCATGACCATGAAGATGATCATGACCACGACAAACATGACCATGATGACCACGACGATCATGACCATGATGACCACGACGATCATGACCATAATGATCATGACAAGGATGACCACGACGATCATGACCATAATGATCATGACAAGGATGACCATGACGATCATGACCACGATGATCATGACCATGATCACGATCACGACGCTGATGTCAATAGCTTGGATGATCACCATGAACAGCACGACCATGACCATGATCACGATGATGACGACCATGACCACGACCATGACCATGATCACGATGATGACGACCACGATCACGACCATGACGGCATTAAAAATTAG
Protein sequence
MAYSKTFLLLSLLLALLYVSSHVSARLLEEKKSVVKSDDHDDDHDHGLGYHYDGHDHDHEDDHDHDKHDHDDHDDHDHDDHDDHDHNDHDKDDHDDHDHNDHDKDDHDDHDHDDHDHDHDHDADVNSLDDHHEQHDHDHDHDDDDHDHDHDHDHDDDDHDHDHDGIKN
Homology
BLAST of CmaCh01G012540 vs. ExPASy TrEMBL
Match:
A0A6J1J1J4 (histidine-rich glycoprotein-like OS=Cucurbita maxima OX=3661 GN=LOC111480431 PE=4 SV=1)
HSP 1 Score: 258.5 bits (659), Expect = 2.0e-65
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
Query: 1 MAYSKTFLLLSLLLALLYVSSHVSARLLEEKKSVVKSDDHDDDHDHGLGYHYDGHDHDHE 60
MAYSKTFLLLSLLLALLYVSSHVSARLLEEKKSVVKSDDHDDDHDHGLGYHYDGHDHDHE
Sbjct: 1 MAYSKTFLLLSLLLALLYVSSHVSARLLEEKKSVVKSDDHDDDHDHGLGYHYDGHDHDHE 60
Query: 61 DDHDHDKHDHDDHDDHDHDDHDDHDHNDHDKDDHDDHDHNDHDKDDHDDHDHDDHDHDHD 120
DDHDHDKHDHDDHDDHDHDDHDDHDHNDHDKDDHDDHDHNDHDKDDHDDHDHDDHDHDHD
Sbjct: 61 DDHDHDKHDHDDHDDHDHDDHDDHDHNDHDKDDHDDHDHNDHDKDDHDDHDHDDHDHDHD 120
Query: 121 HDADVNSLDDHHEQHDHDHDHDDDDHDHDHDHDHDDDDHDHDHDGIKN 169
HDADVNSLDDHHEQHDHDHDHDDDDHDHDHDHDHDDDDHDHDHDGIKN
Sbjct: 121 HDADVNSLDDHHEQHDHDHDHDDDDHDHDHDHDHDDDDHDHDHDGIKN 168
BLAST of CmaCh01G012540 vs. ExPASy TrEMBL
Match:
A0A6J1FL97 (prostatic spermine-binding protein-like OS=Cucurbita moschata OX=3662 GN=LOC111446778 PE=4 SV=1)
HSP 1 Score: 197.2 bits (500), Expect = 5.5e-47
Identity = 145/172 (84.30%), Postives = 153/172 (88.95%), Query Frame = 0
Query: 1 MAYSKTFLLLSLLLALLYVSSHVSARLLEEKKSVVKSDDHDDDHDHGLGYHYDGHDHDHE 60
MAYSKTFLLL LLLALLYVSSHVSARLLEEKKSVVKSDDHDDDHDHGLGY YD DH+
Sbjct: 1 MAYSKTFLLLGLLLALLYVSSHVSARLLEEKKSVVKSDDHDDDHDHGLGYRYD----DHD 60
Query: 61 DDHDHDKHDHDDHDDHDHDDHDDHDHNDHDKDDHDDHDHNDHDKDDHDDHDHDDH----- 120
DDHDHDKHDHDDHDDHDHDDHD DH+DHDKDDHDDHDH+DHDKDDHDD+DHDDH
Sbjct: 61 DDHDHDKHDHDDHDDHDHDDHDKDDHDDHDKDDHDDHDHDDHDKDDHDDNDHDDHDKDDH 120
Query: 121 ------DHDHDHDADVNSLDDHHEQHDHDHDHDDDDHDHDHDHDHDDDDHDH 162
DHDHDHDA+VNSLDDHHEQ+DHDHDHDDDDHDH+HDHDHDDDDHD+
Sbjct: 121 DDHDYDDHDHDHDANVNSLDDHHEQYDHDHDHDDDDHDHNHDHDHDDDDHDN 168
BLAST of CmaCh01G012540 vs. ExPASy TrEMBL
Match:
A0A1S3QDS3 (histidine-rich glycoprotein-like OS=Salmo salar OX=8030 GN=LOC106590924 PE=4 SV=1)
HSP 1 Score: 64.3 bits (155), Expect = 5.5e-07
Identity = 94/158 (59.49%), Postives = 105/158 (66.46%), Query Frame = 0
Query: 37 SDDHDDDHDHGLGYHYDGHDHDHEDDHDHDKHDHDDHD---DHDHDDHD-DHDHNDHDKD 96
S +HD DHDH + +D HDHDH++DHDHD HDHD H+ DHDHD HD DHD +DHD D
Sbjct: 59 SHNHDQDHDHDHDHDHDSHDHDHDNDHDHDSHDHDSHNHDHDHDHDSHDHDHDSHDHDHD 118
Query: 97 DHD---------DHDH--------NDHDKD-DHD-DHDHDDHDHDHDHDADV---NSLD- 156
HD DHDH NDHD+D DHD DHDHD HDHDHDHD D+ N D
Sbjct: 119 SHDHDHDNDHDQDHDHNNDSHDHDNDHDQDQDHDNDHDHDSHDHDHDHDHDIDHDNDHDN 178
Query: 157 DHHEQHDHDHDHDDDDHDHDHDHDHD---DDDHDHDHD 165
DH HD+DHDHD DHD+DHDHDHD D DHDHDHD
Sbjct: 179 DHDNDHDNDHDHDSHDHDNDHDHDHDHDHDQDHDHDHD 216
BLAST of CmaCh01G012540 vs. ExPASy TrEMBL
Match:
A0A1S3QC47 (histidine-rich glycoprotein-like OS=Salmo salar OX=8030 GN=LOC106590925 PE=4 SV=1)
HSP 1 Score: 62.4 bits (150), Expect = 2.1e-06
Identity = 96/137 (70.07%), Postives = 102/137 (74.45%), Query Frame = 0
Query: 39 DHDDDHDHGLGYHYDGHDHDHED-DHDHD-KHDHD-DHDDHDHD--DHD-DHDHNDHDKD 98
DHD DHDH + +D HDHDH+ DHDHD HDHD DHDDHDHD DHD DHDH+ HD D
Sbjct: 70 DHDHDHDHDNDHDHDSHDHDHDSHDHDHDHDHDHDHDHDDHDHDSLDHDPDHDHDSHDHD 129
Query: 99 -DHD-DHDH-NDHDKDDHDDHDHDDHDHDHDHDADVNSLDDHHEQHDHDHDHD-DDDHDH 158
DHD DHDH NDHD D H DHDHD HDHDHDHD D DH HDHDHDHD D+DHDH
Sbjct: 130 HDHDHDHDHDNDHDHDSH-DHDHDSHDHDHDHDHD----RDHDHDHDHDHDHDNDNDHDH 189
Query: 159 DHDHDHDDD-DHDHDHD 165
D+DHDHD D DHDHDHD
Sbjct: 190 DNDHDHDQDHDHDHDHD 201
BLAST of CmaCh01G012540 vs. ExPASy TrEMBL
Match:
A0A1Q9CBF0 (Nipped-B-like protein B OS=Symbiodinium microadriaticum OX=2951 GN=nipblb PE=4 SV=1)
HSP 1 Score: 57.8 bits (138), Expect = 5.2e-05
Identity = 88/131 (67.18%), Postives = 94/131 (71.76%), Query Frame = 0
Query: 39 DHDDDHDHGLGYHYDGHDHDHEDDHDHDKHDHDDHDDHDHDDHDDHDH-NDHDKDDHDDH 98
DHD DHDH + +D HDHDH+ DHDHD HDHD DHDHD DHDH +DHD D DH
Sbjct: 944 DHDHDHDHDHDHDHD-HDHDHDHDHDHD-HDHDHDHDHDHDHDHDHDHDHDHDHDHDHDH 1003
Query: 99 DH-NDHDKDDHDDHDHD-DHDHDHDHDADVNSLDDHHEQHDHDHDHD-DDDHDHDHDHDH 158
DH +DHD D DHDHD DHDHDHDHD D + DH HDHDHDHD D DHDHDHDHDH
Sbjct: 1004 DHDHDHDHDHDHDHDHDHDHDHDHDHDHDHDHDHDHDHDHDHDHDHDHDHDHDHDHDHDH 1063
Query: 159 D-DDDHDHDHD 165
D D DHDHDHD
Sbjct: 1064 DHDHDHDHDHD 1072
BLAST of CmaCh01G012540 vs. NCBI nr
Match:
XP_022981233.1 (histidine-rich glycoprotein-like [Cucurbita maxima])
HSP 1 Score: 258.5 bits (659), Expect = 4.1e-65
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
Query: 1 MAYSKTFLLLSLLLALLYVSSHVSARLLEEKKSVVKSDDHDDDHDHGLGYHYDGHDHDHE 60
MAYSKTFLLLSLLLALLYVSSHVSARLLEEKKSVVKSDDHDDDHDHGLGYHYDGHDHDHE
Sbjct: 1 MAYSKTFLLLSLLLALLYVSSHVSARLLEEKKSVVKSDDHDDDHDHGLGYHYDGHDHDHE 60
Query: 61 DDHDHDKHDHDDHDDHDHDDHDDHDHNDHDKDDHDDHDHNDHDKDDHDDHDHDDHDHDHD 120
DDHDHDKHDHDDHDDHDHDDHDDHDHNDHDKDDHDDHDHNDHDKDDHDDHDHDDHDHDHD
Sbjct: 61 DDHDHDKHDHDDHDDHDHDDHDDHDHNDHDKDDHDDHDHNDHDKDDHDDHDHDDHDHDHD 120
Query: 121 HDADVNSLDDHHEQHDHDHDHDDDDHDHDHDHDHDDDDHDHDHDGIKN 169
HDADVNSLDDHHEQHDHDHDHDDDDHDHDHDHDHDDDDHDHDHDGIKN
Sbjct: 121 HDADVNSLDDHHEQHDHDHDHDDDDHDHDHDHDHDDDDHDHDHDGIKN 168
BLAST of CmaCh01G012540 vs. NCBI nr
Match:
KAG6607931.1 (hypothetical protein SDJN03_01273, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 220.7 bits (561), Expect = 9.5e-54
Identity = 156/176 (88.64%), Postives = 161/176 (91.48%), Query Frame = 0
Query: 1 MAYSKTFLLLSLLLALLYVSSHVSARLLEEKKSVVKSDDHDDDHDHGLGYHYDGHDHDHE 60
MAYSKTFLLL LLLALLYVSSHVSARLLEEKKSVVKSDDHDDDHDHGLGY +D HDHDH+
Sbjct: 1 MAYSKTFLLLGLLLALLYVSSHVSARLLEEKKSVVKSDDHDDDHDHGLGYRHDDHDHDHD 60
Query: 61 DDHDHDK--------HDHDDHDDHDHDDHDDHDHNDHDKDDHDDHDHNDHDKDDHDDHDH 120
DDHDHDK HDHDDHDDHD DDHDDHDH+DHDKDDHDDHDH+DHDKDDHDDHDH
Sbjct: 61 DDHDHDKYDHDGHDDHDHDDHDDHDKDDHDDHDHDDHDKDDHDDHDHDDHDKDDHDDHDH 120
Query: 121 DDHDHDHDHDADVNSLDDHHEQHDHDHDHDDDDHDHDHDHDHDDDDHDHDHDGIKN 169
D DHDHDHDA+VNSLDDHHEQHDHDHDHDDDDHDHDHDHDHDDDDHDHDHD IKN
Sbjct: 121 D--DHDHDHDANVNSLDDHHEQHDHDHDHDDDDHDHDHDHDHDDDDHDHDHDDIKN 174
BLAST of CmaCh01G012540 vs. NCBI nr
Match:
KAG7037450.1 (hypothetical protein SDJN02_01077, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 211.8 bits (538), Expect = 4.4e-51
Identity = 154/192 (80.21%), Postives = 160/192 (83.33%), Query Frame = 0
Query: 1 MAYSKTFLLLSLLLALLYVSSHVSARLLEEKKSVVKSDDHDDDHDHGLGYHYDGHDHDHE 60
MAYSKTFLLL LLLALLYVSSHVSARLLEEKKSVVKSDDHDDDHDHG GYH+D DH+
Sbjct: 1 MAYSKTFLLLGLLLALLYVSSHVSARLLEEKKSVVKSDDHDDDHDHGFGYHHD----DHD 60
Query: 61 DDHDHDKHDHDDHDDHDHDDHDDHDHNDHDKDDHDDHDHNDHDKDDHDDHDHDDH----- 120
DDHDHDKHDHDDHDDHD DDHDDHDH+DHDKDDHDDHDH+DHDKDDHDDHDHDDH
Sbjct: 61 DDHDHDKHDHDDHDDHDKDDHDDHDHDDHDKDDHDDHDHDDHDKDDHDDHDHDDHDKDDH 120
Query: 121 -------------------DHDHDHDADVNSLDDHHEQHDHDHDHDDDDHDHDHDHDHDD 169
DHDHDHDA+VNSLDDHHEQHDHDHDHDDDDHDH+HDHDHDD
Sbjct: 121 DDHDHDDHDKDDHDDHDHDDHDHDHDANVNSLDDHHEQHDHDHDHDDDDHDHNHDHDHDD 180
BLAST of CmaCh01G012540 vs. NCBI nr
Match:
XP_022941496.1 (prostatic spermine-binding protein-like [Cucurbita moschata])
HSP 1 Score: 197.2 bits (500), Expect = 1.1e-46
Identity = 145/172 (84.30%), Postives = 153/172 (88.95%), Query Frame = 0
Query: 1 MAYSKTFLLLSLLLALLYVSSHVSARLLEEKKSVVKSDDHDDDHDHGLGYHYDGHDHDHE 60
MAYSKTFLLL LLLALLYVSSHVSARLLEEKKSVVKSDDHDDDHDHGLGY YD DH+
Sbjct: 1 MAYSKTFLLLGLLLALLYVSSHVSARLLEEKKSVVKSDDHDDDHDHGLGYRYD----DHD 60
Query: 61 DDHDHDKHDHDDHDDHDHDDHDDHDHNDHDKDDHDDHDHNDHDKDDHDDHDHDDH----- 120
DDHDHDKHDHDDHDDHDHDDHD DH+DHDKDDHDDHDH+DHDKDDHDD+DHDDH
Sbjct: 61 DDHDHDKHDHDDHDDHDHDDHDKDDHDDHDKDDHDDHDHDDHDKDDHDDNDHDDHDKDDH 120
Query: 121 ------DHDHDHDADVNSLDDHHEQHDHDHDHDDDDHDHDHDHDHDDDDHDH 162
DHDHDHDA+VNSLDDHHEQ+DHDHDHDDDDHDH+HDHDHDDDDHD+
Sbjct: 121 DDHDYDDHDHDHDANVNSLDDHHEQYDHDHDHDDDDHDHNHDHDHDDDDHDN 168
BLAST of CmaCh01G012540 vs. NCBI nr
Match:
XP_023525565.1 (prostatic spermine-binding protein-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 195.3 bits (495), Expect = 4.3e-46
Identity = 146/174 (83.91%), Postives = 154/174 (88.51%), Query Frame = 0
Query: 1 MAYSKTFLLLSLLLALLYVSSHVSARLLEEKKSVVKSDDHDDDHDHGLGYHYDGHDHDHE 60
MAYSKTFLLL LLLALLYVSSHVSARLLEEKKSVVKSDDHDDDHDHGLGYH+D HDHDH+
Sbjct: 1 MAYSKTFLLLGLLLALLYVSSHVSARLLEEKKSVVKSDDHDDDHDHGLGYHHDDHDHDHD 60
Query: 61 DDHDHDKHDHDDHDDHDHDDHDDHDHNDHDKDDHDDHDHNDHDKDDHDDHDHDDH----- 120
DDHD+DK+DHDDHDDHDHDDHD DH+DHDKDDHD DH+DHDKDDHDDHDHDDH
Sbjct: 61 DDHDNDKYDHDDHDDHDHDDHDKDDHDDHDKDDHDKDDHDDHDKDDHDDHDHDDHDKDDH 120
Query: 121 -DHDHDHDADVNSLDDHHEQHDHDHDHDDDDHDHDHDHDHDDDDHDHDHDGIKN 169
DHDHDHDA+VNSLDDH HDHDHD+D DHDHDHDHDDDDHDHDHD IKN
Sbjct: 121 DDHDHDHDANVNSLDDH-----HDHDHDND--DHDHDHDHDDDDHDHDHDDIKN 167
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1J1J4 | 2.0e-65 | 100.00 | histidine-rich glycoprotein-like OS=Cucurbita maxima OX=3661 GN=LOC111480431 PE=... | [more] |
A0A6J1FL97 | 5.5e-47 | 84.30 | prostatic spermine-binding protein-like OS=Cucurbita moschata OX=3662 GN=LOC1114... | [more] |
A0A1S3QDS3 | 5.5e-07 | 59.49 | histidine-rich glycoprotein-like OS=Salmo salar OX=8030 GN=LOC106590924 PE=4 SV=... | [more] |
A0A1S3QC47 | 2.1e-06 | 70.07 | histidine-rich glycoprotein-like OS=Salmo salar OX=8030 GN=LOC106590925 PE=4 SV=... | [more] |
A0A1Q9CBF0 | 5.2e-05 | 67.18 | Nipped-B-like protein B OS=Symbiodinium microadriaticum OX=2951 GN=nipblb PE=4 S... | [more] |
Match Name | E-value | Identity | Description | |
XP_022981233.1 | 4.1e-65 | 100.00 | histidine-rich glycoprotein-like [Cucurbita maxima] | [more] |
KAG6607931.1 | 9.5e-54 | 88.64 | hypothetical protein SDJN03_01273, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7037450.1 | 4.4e-51 | 80.21 | hypothetical protein SDJN02_01077, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_022941496.1 | 1.1e-46 | 84.30 | prostatic spermine-binding protein-like [Cucurbita moschata] | [more] |
XP_023525565.1 | 4.3e-46 | 83.91 | prostatic spermine-binding protein-like [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |