CmaCh01G012180 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh01G012180
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionpre-mRNA-splicing factor CWC22 homolog isoform X2
LocationCma_Chr01: 8827990 .. 8829744 (-)
RNA-Seq ExpressionCmaCh01G012180
SyntenyCmaCh01G012180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGTACAACCAGCAATGAGAGAGAAATCGATAGGTGTAAGGGCAGGTCTAGAAAGAGGAAAAAAAATATGGGGAAGATTGAAAGGAGTCGGTATCAGTCAAAGAGTCATTCGCCATCTCTTTATGTAGTGAAGGTAGTGATCATCAGAATGAGGTTGAGGATGTCTGTTATGTTGAAAATAACTTGAGACGACTAAGATCTGTAATCGTTGTAGTAGGAGAGGAAGATAAATTAGAGACGTTTGATGGGAATGAACGACAAGAAAACGTCACACATCAACCTGATCATGACCACCCTTCTTTTGGGGATATGGACAGAAATGATGGGATGAGTAATAGAGAATTAGATAATCTTATATCTGAAGAGGCACCAGTGATTATAACTGACAATAGAAACTCTATAGTTGTGAAGGATGATGGAGTTCAAAATGAAGGAAGCAACAATAACCATGGAGGATCAACTCATGACCATCCTTTATATGAAAGAAAGAATGGTTGTTCTGTAAACACCGACGACACAAACTATATCGACTTAGAGTCGATTTTAAGACAGAGGGCTTTGGAAAACTTAAGAAAGTACAAACGGGTGCTCCCAAGGAATGTGGAAACTCCTGCTAATTGCGAAGTTGACAAAAGTAATGATGCGAAGCAACTGGACTCCCCTGTCTCTAAGTCGGTTCACGTGACTTCCCCTAGGGATGAGGCTGGGATAAATGGTAACAGGTTCTCTAGACAAGGTGGAGGGAATGCTGTAAATTCAATGATAATTGAAAATGGTGTTAAATCTACCGATGAAATGGACTCGGCCGTTGCATCTACGTATGATCCTGTCTGTTCTTCTCAGCGCCTGGGTAAGATTTCCAATGGAAGCAATGATATGAATGAACTGAAGCAGCATATTTCGTCAGTAGACCAGGAGGTTGTAAATGATAGGATTTGCCAGAAGGCAGATGCAGATATTTGTCCAACAACTAACAGAAGCAATTTGGTTATTGCAGCTTTGAAGCCCTGAGTCGAATGTTGATTCTCTTACTGAGCAGGCATCTGCCTCTCAGGAACCTATCCAAACAAAGCCATCTAAATCCGACATGTGCGACGATGAAACCGCTCAAACTCAGACCCAGATGAGGAACAATGATGTTCAAAACATTGGTGATGGTTTTGGATCTCCACCTCACAAGCCTTCTTCTTCTTCTTCCGTTAATTCTATTTCAGGAGAAAATCTCTTGAACGAGTCCAGACACGAGAGTGGTGAAGGCTCACAGTTCGAACAGAAAACCATGTCGGTAAAGCGGGGTGGTGAAATGGTGCAGGTGAAAATATTGAGTACTGAATAAATTTATATATTCAGCAGGGAGTATAACTGTACTAGTTTTCTTAAGAACTTGGAACGGATCTGCAAATATCCATTTCAGGTGAACTACAAGGTGTACATTCCAAAGAGAGCTCCTGGTTTGAGGAGGCAACTCAAGCGGTGACTTAAGATCCATGATTTTGCAGCCTTGTAGGATGCTCCTGTTGCTTGCCATTCCAAAGATTGTGAAGTTTTGGATTAGAATTTTCCATTCGCTTTCTGTGCGAAGGATCTATAAAGCCTTGAAATATGAACAATAATTAGTGCAGCCAATTGGTAGCATTTGTCTGTTAACTTTTCCATCAGAATGATCAATATGACCATTTGATCAAACGAGATCCAAGTTTTCTTTGTGAAATATTGGTAGCATTTTATTTGATCTATCATGAAATATTGGG

mRNA sequence

ATGGGAGTACAACCAGCAATGAGAGAGAAATCGATAGGTGTAAGGGCAGGTAGTGATCATCAGAATGAGGTTGAGGATGTCTGTTATGTTGAAAATAACTTGAGACGACTAAGATCTGTAATCGTTGTAGTAGGAGAGGAAGATAAATTAGAGACGTTTGATGGGAATGAACGACAAGAAAACGTCACACATCAACCTGATCATGACCACCCTTCTTTTGGGGATATGGACAGAAATGATGGGATGAGTAATAGAGAATTAGATAATCTTATATCTGAAGAGGCACCAGTGATTATAACTGACAATAGAAACTCTATAGTTGTGAAGGATGATGGAGTTCAAAATGAAGGAAGCAACAATAACCATGGAGGATCAACTCATGACCATCCTTTATATGAAAGAAAGAATGGTTGTTCTGTAAACACCGACGACACAAACTATATCGACTTAGAGTCGATTTTAAGACAGAGGGCTTTGGAAAACTTAAGAAAGTACAAACGGGTGCTCCCAAGGAATGTGGAAACTCCTGCTAATTGCGAAGTTGACAAAAGTAATGATGCGAAGCAACTGGACTCCCCTGTCTCTAAGTCGGTTCACGTGACTTCCCCTAGGGATGAGGCTGGGATAAATGGTAACAGGTTCTCTAGACAAGGTGGAGGGAATGCTGTAAATTCAATGATAATTGAAAATGGTGTTAAATCTACCGATGAAATGGACTCGGCCGTTGCATCTACGTATGATCCTGTCTGTTCTTCTCAGCGCCTGGGTAAGATTTCCAATGGAAGCAATGATATGAATGAACTGAAGCAGCATATTTCGTCAGTAGACCAGGAGGTTGTAAATGATAGGATTTGCCAGAAGGCAGATGCAGATATTTGTCCAACAACTAACAGAAGCAATTTGGCATCTGCCTCTCAGGAACCTATCCAAACAAAGCCATCTAAATCCGACATGTGCGACGATGAAACCGCTCAAACTCAGACCCAGATGAGGAACAATGATGTTCAAAACATTGGTGATGGTTTTGGATCTCCACCTCACAAGCCTTCTTCTTCTTCTTCCGTTAATTCTATTTCAGGAGAAAATCTCTTGAACGAGTCCAGACACGAGAGTGGTGAAGGCTCACAGTTCGAACAGAAAACCATGTCGGTAAAGCGGGGTGGTGAAATGGTGCAGGTGAACTACAAGGTGTACATTCCAAAGAGAGCTCCTGGTTTGAGGAGGCAACTCAAGCGGTGACTTAAGATCCATGATTTTGCAGCCTTGTAGGATGCTCCTGTTGCTTGCCATTCCAAAGATTGTGAAGTTTTGGATTAGAATTTTCCATTCGCTTTCTGTGCGAAGGATCTATAAAGCCTTGAAATATGAACAATAATTAGTGCAGCCAATTGGTAGCATTTGTCTGTTAACTTTTCCATCAGAATGATCAATATGACCATTTGATCAAACGAGATCCAAGTTTTCTTTGTGAAATATTGGTAGCATTTTATTTGATCTATCATGAAATATTGGG

Coding sequence (CDS)

ATGGGAGTACAACCAGCAATGAGAGAGAAATCGATAGGTGTAAGGGCAGGTAGTGATCATCAGAATGAGGTTGAGGATGTCTGTTATGTTGAAAATAACTTGAGACGACTAAGATCTGTAATCGTTGTAGTAGGAGAGGAAGATAAATTAGAGACGTTTGATGGGAATGAACGACAAGAAAACGTCACACATCAACCTGATCATGACCACCCTTCTTTTGGGGATATGGACAGAAATGATGGGATGAGTAATAGAGAATTAGATAATCTTATATCTGAAGAGGCACCAGTGATTATAACTGACAATAGAAACTCTATAGTTGTGAAGGATGATGGAGTTCAAAATGAAGGAAGCAACAATAACCATGGAGGATCAACTCATGACCATCCTTTATATGAAAGAAAGAATGGTTGTTCTGTAAACACCGACGACACAAACTATATCGACTTAGAGTCGATTTTAAGACAGAGGGCTTTGGAAAACTTAAGAAAGTACAAACGGGTGCTCCCAAGGAATGTGGAAACTCCTGCTAATTGCGAAGTTGACAAAAGTAATGATGCGAAGCAACTGGACTCCCCTGTCTCTAAGTCGGTTCACGTGACTTCCCCTAGGGATGAGGCTGGGATAAATGGTAACAGGTTCTCTAGACAAGGTGGAGGGAATGCTGTAAATTCAATGATAATTGAAAATGGTGTTAAATCTACCGATGAAATGGACTCGGCCGTTGCATCTACGTATGATCCTGTCTGTTCTTCTCAGCGCCTGGGTAAGATTTCCAATGGAAGCAATGATATGAATGAACTGAAGCAGCATATTTCGTCAGTAGACCAGGAGGTTGTAAATGATAGGATTTGCCAGAAGGCAGATGCAGATATTTGTCCAACAACTAACAGAAGCAATTTGGCATCTGCCTCTCAGGAACCTATCCAAACAAAGCCATCTAAATCCGACATGTGCGACGATGAAACCGCTCAAACTCAGACCCAGATGAGGAACAATGATGTTCAAAACATTGGTGATGGTTTTGGATCTCCACCTCACAAGCCTTCTTCTTCTTCTTCCGTTAATTCTATTTCAGGAGAAAATCTCTTGAACGAGTCCAGACACGAGAGTGGTGAAGGCTCACAGTTCGAACAGAAAACCATGTCGGTAAAGCGGGGTGGTGAAATGGTGCAGGTGAACTACAAGGTGTACATTCCAAAGAGAGCTCCTGGTTTGAGGAGGCAACTCAAGCGGTGA

Protein sequence

MGVQPAMREKSIGVRAGSDHQNEVEDVCYVENNLRRLRSVIVVVGEEDKLETFDGNERQENVTHQPDHDHPSFGDMDRNDGMSNRELDNLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKNGCSVNTDDTNYIDLESILRQRALENLRKYKRVLPRNVETPANCEVDKSNDAKQLDSPVSKSVHVTSPRDEAGINGNRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVCSSQRLGKISNGSNDMNELKQHISSVDQEVVNDRICQKADADICPTTNRSNLASASQEPIQTKPSKSDMCDDETAQTQTQMRNNDVQNIGDGFGSPPHKPSSSSSVNSISGENLLNESRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGLRRQLKR
Homology
BLAST of CmaCh01G012180 vs. ExPASy TrEMBL
Match: A0A6J1FN60 (pre-mRNA-splicing factor CWC22 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446687 PE=4 SV=1)

HSP 1 Score: 697.2 bits (1798), Expect = 4.1e-197
Identity = 372/414 (89.86%), Postives = 379/414 (91.55%), Query Frame = 0

Query: 17  GSDHQNEVEDVCYVENNLRRLRSVIVVVGEEDKLETFDGNERQENVTHQPDHDHPSFGDM 76
           GSDHQNEVE+VCYVENN RRLRSVIVVVGEEDKLETFDGNE QENVTHQPDHDHPSFGD+
Sbjct: 202 GSDHQNEVENVCYVENNFRRLRSVIVVVGEEDKLETFDGNELQENVTHQPDHDHPSFGDI 261

Query: 77  DRNDGMSNRELDNLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKN 136
           +RNDGMSNRELDNLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKN
Sbjct: 262 NRNDGMSNRELDNLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKN 321

Query: 137 GCSVNTDDTNYIDLESILRQRALENLRKYKRVLPRNVETPANCEVDKSNDAKQLDSPVSK 196
           GCSVNTDDTN IDLESILRQRALENLRKYKRVLPRNVETPAN EVD SNDAKQLDSPVSK
Sbjct: 322 GCSVNTDDTNCIDLESILRQRALENLRKYKRVLPRNVETPANYEVDNSNDAKQLDSPVSK 381

Query: 197 SVHVTSPRDEAGINGNRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVCSSQRLG 256
            VHVTSPRDEAGING+RFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPV SSQ LG
Sbjct: 382 LVHVTSPRDEAGINGHRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYSSQHLG 441

Query: 257 KISNGSNDMNELKQHISSVDQEVVNDRICQKADADICPTTNRSNL--------------- 316
           KISNGSNDMNELKQHISSVDQEVVND IC  ADADICPTTNRSNL               
Sbjct: 442 KISNGSNDMNELKQHISSVDQEVVNDSICHMADADICPTTNRSNLVIAALKPESNVDSLT 501

Query: 317 --ASASQEPIQTKPSKSDMCDDETAQTQTQMRNNDVQNIGDGFGSPPHKPSSSSSVNSIS 376
             ASASQE IQTKPSKSDM D ET QTQTQMRNNDVQNIGDGFGS  HKPSSSSS+NSIS
Sbjct: 502 EQASASQESIQTKPSKSDMGDGETTQTQTQMRNNDVQNIGDGFGSSAHKPSSSSSLNSIS 561

Query: 377 GENLLNESRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGL-RRQLKR 413
           GE+LLN+SRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGL RRQLKR
Sbjct: 562 GESLLNDSRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR 615

BLAST of CmaCh01G012180 vs. ExPASy TrEMBL
Match: A0A6J1FTH5 (pre-mRNA-splicing factor CWC22 homolog isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446687 PE=4 SV=1)

HSP 1 Score: 697.2 bits (1798), Expect = 4.1e-197
Identity = 372/414 (89.86%), Postives = 379/414 (91.55%), Query Frame = 0

Query: 17  GSDHQNEVEDVCYVENNLRRLRSVIVVVGEEDKLETFDGNERQENVTHQPDHDHPSFGDM 76
           GSDHQNEVE+VCYVENN RRLRSVIVVVGEEDKLETFDGNE QENVTHQPDHDHPSFGD+
Sbjct: 184 GSDHQNEVENVCYVENNFRRLRSVIVVVGEEDKLETFDGNELQENVTHQPDHDHPSFGDI 243

Query: 77  DRNDGMSNRELDNLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKN 136
           +RNDGMSNRELDNLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKN
Sbjct: 244 NRNDGMSNRELDNLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKN 303

Query: 137 GCSVNTDDTNYIDLESILRQRALENLRKYKRVLPRNVETPANCEVDKSNDAKQLDSPVSK 196
           GCSVNTDDTN IDLESILRQRALENLRKYKRVLPRNVETPAN EVD SNDAKQLDSPVSK
Sbjct: 304 GCSVNTDDTNCIDLESILRQRALENLRKYKRVLPRNVETPANYEVDNSNDAKQLDSPVSK 363

Query: 197 SVHVTSPRDEAGINGNRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVCSSQRLG 256
            VHVTSPRDEAGING+RFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPV SSQ LG
Sbjct: 364 LVHVTSPRDEAGINGHRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYSSQHLG 423

Query: 257 KISNGSNDMNELKQHISSVDQEVVNDRICQKADADICPTTNRSNL--------------- 316
           KISNGSNDMNELKQHISSVDQEVVND IC  ADADICPTTNRSNL               
Sbjct: 424 KISNGSNDMNELKQHISSVDQEVVNDSICHMADADICPTTNRSNLVIAALKPESNVDSLT 483

Query: 317 --ASASQEPIQTKPSKSDMCDDETAQTQTQMRNNDVQNIGDGFGSPPHKPSSSSSVNSIS 376
             ASASQE IQTKPSKSDM D ET QTQTQMRNNDVQNIGDGFGS  HKPSSSSS+NSIS
Sbjct: 484 EQASASQESIQTKPSKSDMGDGETTQTQTQMRNNDVQNIGDGFGSSAHKPSSSSSLNSIS 543

Query: 377 GENLLNESRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGL-RRQLKR 413
           GE+LLN+SRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGL RRQLKR
Sbjct: 544 GESLLNDSRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR 597

BLAST of CmaCh01G012180 vs. ExPASy TrEMBL
Match: A0A6J1FKY7 (pre-mRNA-splicing factor CWC22 homolog isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111446687 PE=4 SV=1)

HSP 1 Score: 607.4 bits (1565), Expect = 4.3e-170
Identity = 334/397 (84.13%), Postives = 344/397 (86.65%), Query Frame = 0

Query: 17  GSDHQNEVEDVCYVENNLRRLRSVIVVVGEEDKLETFDGNERQENVTHQPDHDHPSFGDM 76
           GSDHQNEVE+VCYVENN RRLRSVIVVVGEEDKLETFDGNE QENVTHQPDHDHPSFGD+
Sbjct: 202 GSDHQNEVENVCYVENNFRRLRSVIVVVGEEDKLETFDGNELQENVTHQPDHDHPSFGDI 261

Query: 77  DRNDGMSNRELDNLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKN 136
           +RNDGMSNRELDNLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKN
Sbjct: 262 NRNDGMSNRELDNLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKN 321

Query: 137 GCSVNTDDTNYIDLESILRQRALENLRKYKRVLPRNVETPANCEVDKSNDAKQLDSPVSK 196
           GCSVNTDDTN IDLESILRQRALENLRKYKRVLPRNVETPAN EVD SNDAKQLDSPVSK
Sbjct: 322 GCSVNTDDTNCIDLESILRQRALENLRKYKRVLPRNVETPANYEVDNSNDAKQLDSPVSK 381

Query: 197 SVHVTSPRDEAGINGNRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVCSSQRLG 256
            VHVTSPRDEAGING+RFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPV SSQ L 
Sbjct: 382 LVHVTSPRDEAGINGHRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYSSQHLA 441

Query: 257 KISNGSNDMNELKQHISSVDQEVVNDRICQKADADICPTTNRSNLASASQEPIQTKPSKS 316
                      LK   S+VD                    + +  ASASQE IQTKPSKS
Sbjct: 442 -----------LKPE-SNVD--------------------SLTEQASASQESIQTKPSKS 501

Query: 317 DMCDDETAQTQTQMRNNDVQNIGDGFGSPPHKPSSSSSVNSISGENLLNESRHESGEGSQ 376
           DM D ET QTQTQMRNNDVQNIGDGFGS  HKPSSSSS+NSISGE+LLN+SRHESGEGSQ
Sbjct: 502 DMGDGETTQTQTQMRNNDVQNIGDGFGSSAHKPSSSSSLNSISGESLLNDSRHESGEGSQ 561

Query: 377 FEQKTMSVKRGGEMVQVNYKVYIPKRAPGL-RRQLKR 413
           FEQKTMSVKRGGEMVQVNYKVYIPKRAPGL RRQLKR
Sbjct: 562 FEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR 566

BLAST of CmaCh01G012180 vs. ExPASy TrEMBL
Match: A0A6J1CDR0 (uncharacterized protein LOC111010601 OS=Momordica charantia OX=3673 GN=LOC111010601 PE=4 SV=1)

HSP 1 Score: 515.0 bits (1325), Expect = 2.9e-142
Identity = 300/422 (71.09%), Postives = 325/422 (77.01%), Query Frame = 0

Query: 17  GSDHQNEVEDVCYVENNLRRLRSVIVVVGEEDKLETFDGNERQENVTHQPDHDHPSFGDM 76
           GSD+QNEVED  YVENN RRLRSVIVVVGEE+KL+TFDGNE+QE V H PD DHPSFGDM
Sbjct: 188 GSDYQNEVEDGSYVENNFRRLRSVIVVVGEENKLKTFDGNEQQEEVMHHPDDDHPSFGDM 247

Query: 77  DRNDGMSNRELDNLISEEA-------PVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDH 136
           D NDGMS RELD + S EA        V+I D RN +VVKD GVQNEGSNNNHGG T+DH
Sbjct: 248 DSNDGMSKRELDRVTSNEASEVENKKEVVIPDIRNFLVVKDGGVQNEGSNNNHGGVTNDH 307

Query: 137 PLYERKNGCSVNTDDTNYIDLESILRQRALENLRKYKRVLPRNVETPANCEVDKSNDAKQ 196
           PL E  NG S NTD  N IDLESILRQRALENLRK+K V P+NVET ANC+VD SNDAKQ
Sbjct: 308 PLNEGNNG-SGNTDRINCIDLESILRQRALENLRKFKGVPPKNVETSANCQVDNSNDAKQ 367

Query: 197 LDSPVSKSVHVTSPRDEAGINGNRFSRQGGGNAVNSMII-ENGVKSTDEMDSAVASTYDP 256
           L SPVS SV + SPRD+A ING  FS QGGGNAVN MI+ ENGV+ST+ +DSAVAST+DP
Sbjct: 368 LYSPVSNSVRIKSPRDDAEINGKGFSGQGGGNAVNPMIVEENGVESTNAIDSAVASTHDP 427

Query: 257 VCSSQRLGKISNGSNDMNELKQHISSVDQEVVNDRICQKADADICPTTNRSNL------- 316
           + SSQ LGKIS+ SN MNELKQ ISS+DQE VND ICQK DADIC TT+RSNL       
Sbjct: 428 IYSSQNLGKISSTSNGMNELKQDISSLDQEAVNDNICQKVDADICSTTSRSNLVYAALRP 487

Query: 317 ----------ASASQEPIQTKPSKSDMCDDETAQTQTQMRNNDVQNIGDGFGSPPHKPSS 376
                     ASA QE IQTKPS SDM  DE AQ Q Q RNND QNI +GF S  HKP  
Sbjct: 488 DSKVDFLVKQASAPQEYIQTKPSISDMGVDEIAQMQIQTRNNDDQNIVNGFDSSAHKP-- 547

Query: 377 SSSVNSISGENLLNESRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGL-RRQL 413
           SSS+N  SGEN LN+ RHESGEGSQFEQKTMSV RGGEMVQVNYKVYIPKRAP L RRQL
Sbjct: 548 SSSLNYFSGENSLNKPRHESGEGSQFEQKTMSVMRGGEMVQVNYKVYIPKRAPALARRQL 606

BLAST of CmaCh01G012180 vs. ExPASy TrEMBL
Match: A0A6J1F6D1 (uncharacterized protein LOC111442542 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442542 PE=4 SV=1)

HSP 1 Score: 507.7 bits (1306), Expect = 4.6e-140
Identity = 292/422 (69.19%), Postives = 330/422 (78.20%), Query Frame = 0

Query: 17  GSDHQNEVEDVCYVENNLRRLRSVIVVVGEEDKLETFDGNERQENVTHQPDHDHPSFGDM 76
           GSD QNEVED  YVEN+ RRL+S+IVVVGEED+L+TF GNE+QE VTHQ D +HPSFGDM
Sbjct: 190 GSDFQNEVEDDSYVENSCRRLKSIIVVVGEEDELKTFVGNEQQEAVTHQLDDNHPSFGDM 249

Query: 77  DRNDGMSNRELDNLISEEAP-------VIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDH 136
           +  DG S RELD +IS+EAP       ++  DNRNS+++ DDGV+NEGSN NHGG T+DH
Sbjct: 250 NSKDGTSKRELDYVISKEAPEVESKNKIVTPDNRNSLILNDDGVRNEGSNKNHGGVTNDH 309

Query: 137 PLYERKNGCSVNTDDTNYIDLESILRQRALENLRKYKRVLPRNVETPANCEVDKSNDAKQ 196
            L ERKNGCS NT+  N IDLESILRQ+ALENLRK+K V PRNVE  ANC+V+ +NDAKQ
Sbjct: 310 SLDERKNGCSGNTESINCIDLESILRQKALENLRKFKGVSPRNVEIIANCKVENNNDAKQ 369

Query: 197 LDSPVSKSVHVTSPRDEAGINGNRFSRQGGGNAVNSMIIE-NGVKSTDEMDSAVASTYDP 256
           L SPVSKSVHVT PRD+A IN   FSRQ GG+AVNSMI++ NG KSTD +D+AVAS +DP
Sbjct: 370 LISPVSKSVHVTFPRDDAEINVKGFSRQDGGDAVNSMIVKGNGFKSTDAIDTAVASMHDP 429

Query: 257 VCSSQRLGKISNGSNDMNELKQHISSVDQEVVNDRICQKADADICPTTNRSNL------- 316
           VCSSQ LGKISNGSN MNE KQ ISS+DQEV+ND IC KADADI  TTNRSNL       
Sbjct: 430 VCSSQNLGKISNGSNGMNEPKQDISSLDQEVINDNICLKADADIYSTTNRSNLVIAAFRP 489

Query: 317 ----------ASASQEPIQTKPSKSDMCDDETAQTQTQMRNNDVQNIGDGFGSPPHKPSS 376
                     AS  QE IQTK S SD+  DETAQTQTQM NND QNI +GFGS  +K  S
Sbjct: 490 ESKVDSFIKKASVDQECIQTKSSISDIVVDETAQTQTQMTNNDDQNIRNGFGSSAYK--S 549

Query: 377 SSSVNSISGENLLNESRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGL-RRQL 413
           SSS+N ISGEN L++SR ESGEGSQFEQKTMSV RGGEMVQVNYKVYIPKRAP L RRQL
Sbjct: 550 SSSLNPISGENRLDKSRQESGEGSQFEQKTMSVMRGGEMVQVNYKVYIPKRAPALTRRQL 609

BLAST of CmaCh01G012180 vs. NCBI nr
Match: XP_023525531.1 (uncharacterized protein LOC111789118 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 715.7 bits (1846), Expect = 2.3e-202
Identity = 378/414 (91.30%), Postives = 386/414 (93.24%), Query Frame = 0

Query: 17  GSDHQNEVEDVCYVENNLRRLRSVIVVVGEEDKLETFDGNERQENVTHQPDHDHPSFGDM 76
           GSDHQNEVEDVCYVENN RRLRSVIV+VGEEDKLETFDGNE QENVTHQPDHDHPSFGD+
Sbjct: 204 GSDHQNEVEDVCYVENNFRRLRSVIVIVGEEDKLETFDGNELQENVTHQPDHDHPSFGDI 263

Query: 77  DRNDGMSNRELDNLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKN 136
           +RNDGMSNRELDNLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKN
Sbjct: 264 NRNDGMSNRELDNLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKN 323

Query: 137 GCSVNTDDTNYIDLESILRQRALENLRKYKRVLPRNVETPANCEVDKSNDAKQLDSPVSK 196
           GCSVNTDDTN IDLESILRQRALENLRKYKRVLPRNVETPANCEVD SNDAKQLDSPVSK
Sbjct: 324 GCSVNTDDTNCIDLESILRQRALENLRKYKRVLPRNVETPANCEVDNSNDAKQLDSPVSK 383

Query: 197 SVHVTSPRDEAGINGNRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVCSSQRLG 256
           SVHVTSPRDEAGING+RFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPV SSQRLG
Sbjct: 384 SVHVTSPRDEAGINGDRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYSSQRLG 443

Query: 257 KISNGSNDMNELKQHISSVDQEVVNDRICQKADADICPTTNRSNL--------------- 316
           K+SNGSND+NELKQHISSVDQEVVND ICQKADADICPTTNRSNL               
Sbjct: 444 KVSNGSNDLNELKQHISSVDQEVVNDSICQKADADICPTTNRSNLVIAALKPESNVDSLT 503

Query: 317 --ASASQEPIQTKPSKSDMCDDETAQTQTQMRNNDVQNIGDGFGSPPHKPSSSSSVNSIS 376
             ASASQE IQTKPSKS+M D ETAQTQTQMRNNDVQNIGDGFGSP HKPSSSSS+NSIS
Sbjct: 504 EQASASQESIQTKPSKSNMGDGETAQTQTQMRNNDVQNIGDGFGSPAHKPSSSSSLNSIS 563

Query: 377 GENLLNESRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGL-RRQLKR 413
           GENLLNESRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGL RRQLKR
Sbjct: 564 GENLLNESRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR 617

BLAST of CmaCh01G012180 vs. NCBI nr
Match: KAG7037416.1 (hypothetical protein SDJN02_01042 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 704.5 bits (1817), Expect = 5.3e-199
Identity = 374/414 (90.34%), Postives = 382/414 (92.27%), Query Frame = 0

Query: 17  GSDHQNEVEDVCYVENNLRRLRSVIVVVGEEDKLETFDGNERQENVTHQPDHDHPSFGDM 76
           GSDHQNEVEDVCYVENN RRLRSVIVVVGEEDKLETFDGNE QENVTHQPDHDHPSFGD+
Sbjct: 186 GSDHQNEVEDVCYVENNFRRLRSVIVVVGEEDKLETFDGNELQENVTHQPDHDHPSFGDI 245

Query: 77  DRNDGMSNRELDNLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKN 136
           +RNDGMSNRELDNLISEEAPVIITDNRNSIVVK+DGVQNEGSNNNHGGSTHDHPLYERKN
Sbjct: 246 NRNDGMSNRELDNLISEEAPVIITDNRNSIVVKEDGVQNEGSNNNHGGSTHDHPLYERKN 305

Query: 137 GCSVNTDDTNYIDLESILRQRALENLRKYKRVLPRNVETPANCEVDKSNDAKQLDSPVSK 196
           GCS NT+DTN IDLESILRQRALENLRKYKRVLPRNVETP+NCEVD SNDAKQLDSPVSK
Sbjct: 306 GCSGNTNDTNCIDLESILRQRALENLRKYKRVLPRNVETPSNCEVDNSNDAKQLDSPVSK 365

Query: 197 SVHVTSPRDEAGINGNRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVCSSQRLG 256
           S HVTSPRDEAGI+GNRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPV SSQRLG
Sbjct: 366 SAHVTSPRDEAGIDGNRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYSSQRLG 425

Query: 257 KISNGSNDMNELKQHISSVDQEVVNDRICQKADADICPTTNRSNL--------------- 316
           KISNGSNDMNELK+HISSVDQEVVND IC  ADADICPTTNRSNL               
Sbjct: 426 KISNGSNDMNELKKHISSVDQEVVNDSICHMADADICPTTNRSNLVIAALKPESNVDSLT 485

Query: 317 --ASASQEPIQTKPSKSDMCDDETAQTQTQMRNNDVQNIGDGFGSPPHKPSSSSSVNSIS 376
             ASASQE IQTKPSKSDM DDETAQTQTQMRNNDVQNIGDGFGS  HKPSSSSS+NSIS
Sbjct: 486 EQASASQESIQTKPSKSDMGDDETAQTQTQMRNNDVQNIGDGFGSSAHKPSSSSSLNSIS 545

Query: 377 GENLLNESRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGL-RRQLKR 413
           GENLLNESRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGL RRQLKR
Sbjct: 546 GENLLNESRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR 599

BLAST of CmaCh01G012180 vs. NCBI nr
Match: XP_022941379.1 (pre-mRNA-splicing factor CWC22 homolog isoform X1 [Cucurbita moschata])

HSP 1 Score: 697.2 bits (1798), Expect = 8.5e-197
Identity = 372/414 (89.86%), Postives = 379/414 (91.55%), Query Frame = 0

Query: 17  GSDHQNEVEDVCYVENNLRRLRSVIVVVGEEDKLETFDGNERQENVTHQPDHDHPSFGDM 76
           GSDHQNEVE+VCYVENN RRLRSVIVVVGEEDKLETFDGNE QENVTHQPDHDHPSFGD+
Sbjct: 202 GSDHQNEVENVCYVENNFRRLRSVIVVVGEEDKLETFDGNELQENVTHQPDHDHPSFGDI 261

Query: 77  DRNDGMSNRELDNLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKN 136
           +RNDGMSNRELDNLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKN
Sbjct: 262 NRNDGMSNRELDNLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKN 321

Query: 137 GCSVNTDDTNYIDLESILRQRALENLRKYKRVLPRNVETPANCEVDKSNDAKQLDSPVSK 196
           GCSVNTDDTN IDLESILRQRALENLRKYKRVLPRNVETPAN EVD SNDAKQLDSPVSK
Sbjct: 322 GCSVNTDDTNCIDLESILRQRALENLRKYKRVLPRNVETPANYEVDNSNDAKQLDSPVSK 381

Query: 197 SVHVTSPRDEAGINGNRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVCSSQRLG 256
            VHVTSPRDEAGING+RFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPV SSQ LG
Sbjct: 382 LVHVTSPRDEAGINGHRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYSSQHLG 441

Query: 257 KISNGSNDMNELKQHISSVDQEVVNDRICQKADADICPTTNRSNL--------------- 316
           KISNGSNDMNELKQHISSVDQEVVND IC  ADADICPTTNRSNL               
Sbjct: 442 KISNGSNDMNELKQHISSVDQEVVNDSICHMADADICPTTNRSNLVIAALKPESNVDSLT 501

Query: 317 --ASASQEPIQTKPSKSDMCDDETAQTQTQMRNNDVQNIGDGFGSPPHKPSSSSSVNSIS 376
             ASASQE IQTKPSKSDM D ET QTQTQMRNNDVQNIGDGFGS  HKPSSSSS+NSIS
Sbjct: 502 EQASASQESIQTKPSKSDMGDGETTQTQTQMRNNDVQNIGDGFGSSAHKPSSSSSLNSIS 561

Query: 377 GENLLNESRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGL-RRQLKR 413
           GE+LLN+SRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGL RRQLKR
Sbjct: 562 GESLLNDSRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR 615

BLAST of CmaCh01G012180 vs. NCBI nr
Match: XP_022941380.1 (pre-mRNA-splicing factor CWC22 homolog isoform X2 [Cucurbita moschata])

HSP 1 Score: 697.2 bits (1798), Expect = 8.5e-197
Identity = 372/414 (89.86%), Postives = 379/414 (91.55%), Query Frame = 0

Query: 17  GSDHQNEVEDVCYVENNLRRLRSVIVVVGEEDKLETFDGNERQENVTHQPDHDHPSFGDM 76
           GSDHQNEVE+VCYVENN RRLRSVIVVVGEEDKLETFDGNE QENVTHQPDHDHPSFGD+
Sbjct: 184 GSDHQNEVENVCYVENNFRRLRSVIVVVGEEDKLETFDGNELQENVTHQPDHDHPSFGDI 243

Query: 77  DRNDGMSNRELDNLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKN 136
           +RNDGMSNRELDNLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKN
Sbjct: 244 NRNDGMSNRELDNLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKN 303

Query: 137 GCSVNTDDTNYIDLESILRQRALENLRKYKRVLPRNVETPANCEVDKSNDAKQLDSPVSK 196
           GCSVNTDDTN IDLESILRQRALENLRKYKRVLPRNVETPAN EVD SNDAKQLDSPVSK
Sbjct: 304 GCSVNTDDTNCIDLESILRQRALENLRKYKRVLPRNVETPANYEVDNSNDAKQLDSPVSK 363

Query: 197 SVHVTSPRDEAGINGNRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVCSSQRLG 256
            VHVTSPRDEAGING+RFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPV SSQ LG
Sbjct: 364 LVHVTSPRDEAGINGHRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYSSQHLG 423

Query: 257 KISNGSNDMNELKQHISSVDQEVVNDRICQKADADICPTTNRSNL--------------- 316
           KISNGSNDMNELKQHISSVDQEVVND IC  ADADICPTTNRSNL               
Sbjct: 424 KISNGSNDMNELKQHISSVDQEVVNDSICHMADADICPTTNRSNLVIAALKPESNVDSLT 483

Query: 317 --ASASQEPIQTKPSKSDMCDDETAQTQTQMRNNDVQNIGDGFGSPPHKPSSSSSVNSIS 376
             ASASQE IQTKPSKSDM D ET QTQTQMRNNDVQNIGDGFGS  HKPSSSSS+NSIS
Sbjct: 484 EQASASQESIQTKPSKSDMGDGETTQTQTQMRNNDVQNIGDGFGSSAHKPSSSSSLNSIS 543

Query: 377 GENLLNESRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGL-RRQLKR 413
           GE+LLN+SRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGL RRQLKR
Sbjct: 544 GESLLNDSRHESGEGSQFEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR 597

BLAST of CmaCh01G012180 vs. NCBI nr
Match: XP_023525532.1 (pre-mRNA-splicing factor CWC22 homolog isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 623.2 bits (1606), Expect = 1.6e-174
Identity = 340/397 (85.64%), Postives = 349/397 (87.91%), Query Frame = 0

Query: 17  GSDHQNEVEDVCYVENNLRRLRSVIVVVGEEDKLETFDGNERQENVTHQPDHDHPSFGDM 76
           GSDHQNEVEDVCYVENN RRLRSVIV+VGEEDKLETFDGNE QENVTHQPDHDHPSFGD+
Sbjct: 204 GSDHQNEVEDVCYVENNFRRLRSVIVIVGEEDKLETFDGNELQENVTHQPDHDHPSFGDI 263

Query: 77  DRNDGMSNRELDNLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKN 136
           +RNDGMSNRELDNLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKN
Sbjct: 264 NRNDGMSNRELDNLISEEAPVIITDNRNSIVVKDDGVQNEGSNNNHGGSTHDHPLYERKN 323

Query: 137 GCSVNTDDTNYIDLESILRQRALENLRKYKRVLPRNVETPANCEVDKSNDAKQLDSPVSK 196
           GCSVNTDDTN IDLESILRQRALENLRKYKRVLPRNVETPANCEVD SNDAKQLDSPVSK
Sbjct: 324 GCSVNTDDTNCIDLESILRQRALENLRKYKRVLPRNVETPANCEVDNSNDAKQLDSPVSK 383

Query: 197 SVHVTSPRDEAGINGNRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVCSSQRLG 256
           SVHVTSPRDEAGING+RFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPV SSQRL 
Sbjct: 384 SVHVTSPRDEAGINGDRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVYSSQRLA 443

Query: 257 KISNGSNDMNELKQHISSVDQEVVNDRICQKADADICPTTNRSNLASASQEPIQTKPSKS 316
                      LK   S+VD                    + +  ASASQE IQTKPSKS
Sbjct: 444 -----------LKPE-SNVD--------------------SLTEQASASQESIQTKPSKS 503

Query: 317 DMCDDETAQTQTQMRNNDVQNIGDGFGSPPHKPSSSSSVNSISGENLLNESRHESGEGSQ 376
           +M D ETAQTQTQMRNNDVQNIGDGFGSP HKPSSSSS+NSISGENLLNESRHESGEGSQ
Sbjct: 504 NMGDGETAQTQTQMRNNDVQNIGDGFGSPAHKPSSSSSLNSISGENLLNESRHESGEGSQ 563

Query: 377 FEQKTMSVKRGGEMVQVNYKVYIPKRAPGL-RRQLKR 413
           FEQKTMSVKRGGEMVQVNYKVYIPKRAPGL RRQLKR
Sbjct: 564 FEQKTMSVKRGGEMVQVNYKVYIPKRAPGLSRRQLKR 568

BLAST of CmaCh01G012180 vs. TAIR 10
Match: AT5G53930.1 (unknown protein; LOCATED IN: chloroplast; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 53.5 bits (127), Expect = 4.6e-07
Identity = 76/278 (27.34%), Postives = 125/278 (44.96%), Query Frame = 0

Query: 149 DLESILRQRALENLRKYKRVLPRNVETPANCEVDKSNDAKQLDSPVSKSVHVTSPRDEAG 208
           DLE+IL++RALENL++++ V              KS  AK+  S VS+   +    ++  
Sbjct: 276 DLEAILKKRALENLKRFRGV------------TQKSGIAKKEVSSVSEGEPMQIESEKVE 335

Query: 209 INGNRFSRQGGGNAVNSMIIENGVKSTDEMDSAVASTYDPVCSSQRLGKISNGSNDMNEL 268
              +    Q   ++  S  +EN  K    ++   + T     +SQ+     +G     ++
Sbjct: 336 SQDHDLMEQKLCDSAVSKDLENSEKILHVINVKESGTALANSASQQ--DQQSGDTAKVKV 395

Query: 269 KQHISSVDQEVVNDRICQKADADICPTTNRSNLASAS-QEPIQTKPSKSDMCDDETAQTQ 328
              +SS          C      + P  ++ +L  AS +E   ++ ++++  D  T    
Sbjct: 396 SSGLSS----------CTTKRKLVRPVLSKDSLNLASKKEASGSQDAEAESIDGSTVDKN 455

Query: 329 TQMRNNDVQNIGDGFGSPPHKPSSSSSVNSIS------------GENLLNESRHESGEGS 388
                  +    +G    P K SS+ +  S S            G     ++  E+ + S
Sbjct: 456 CLESTLALVTKNEGEHIEPTKVSSTLNAESSSHADTEEVDEVKGGSQSEQKTIDETKDES 515

Query: 389 QFEQKTMSVKRGGEMVQVNYKVYIPKRAPGL-RRQLKR 413
           Q+EQKTM+V RGGEMVQV+YKVYIPK+A  L RR+L R
Sbjct: 516 QYEQKTMTVMRGGEMVQVSYKVYIPKKASSLGRRKLNR 529

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1FN604.1e-19789.86pre-mRNA-splicing factor CWC22 homolog isoform X1 OS=Cucurbita moschata OX=3662 ... [more]
A0A6J1FTH54.1e-19789.86pre-mRNA-splicing factor CWC22 homolog isoform X2 OS=Cucurbita moschata OX=3662 ... [more]
A0A6J1FKY74.3e-17084.13pre-mRNA-splicing factor CWC22 homolog isoform X3 OS=Cucurbita moschata OX=3662 ... [more]
A0A6J1CDR02.9e-14271.09uncharacterized protein LOC111010601 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
A0A6J1F6D14.6e-14069.19uncharacterized protein LOC111442542 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
Match NameE-valueIdentityDescription
XP_023525531.12.3e-20291.30uncharacterized protein LOC111789118 isoform X1 [Cucurbita pepo subsp. pepo][more]
KAG7037416.15.3e-19990.34hypothetical protein SDJN02_01042 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022941379.18.5e-19789.86pre-mRNA-splicing factor CWC22 homolog isoform X1 [Cucurbita moschata][more]
XP_022941380.18.5e-19789.86pre-mRNA-splicing factor CWC22 homolog isoform X2 [Cucurbita moschata][more]
XP_023525532.11.6e-17485.64pre-mRNA-splicing factor CWC22 homolog isoform X2 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT5G53930.14.6e-0727.34unknown protein; LOCATED IN: chloroplast; Has 1807 Blast hits to 1807 proteins i... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 334..359
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 187..222
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 364..383
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 294..313
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 294..320
NoneNo IPR availablePANTHERPTHR36808TRANSCRIPTIONAL REGULATOR ATRX-LIKE PROTEINcoord: 19..412

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh01G012180.1CmaCh01G012180.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane