CmaCh01G011830 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh01G011830
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Auxilin-related protein 2 isoform X2
Location	Cma_Chr01: 8576394 .. 8591275 (-)
RNA-Seq Expression	CmaCh01G011830
Synteny	CmaCh01G011830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTAGAATCAGAGCGCTCCATCAACGGCCTCTTCCCTTCCGAACGTTCGTTGCCGAATTCAAACGCTAGATAATTACCTAGCAATCGGAGGAAGAGACAGCAGAATCGAAAGGAGTTTCTCGCCTGATCCCGGTGATGAAAAATAGAGGTAATGTAATTACATTTTGGTATTTGGTCGTGACTACTCTGTTCTAGGTTGAAATTTTAAAGGCACAGCCGGCTATTCCGATTTAGGGGTTTATTGGAGAATTTCAGAGATTATTCTGATTTAGGGGTTCACTCGAGCAACTTCAGAGGTTAATCGAAGGATCGTTCGTTCTTTCTCTTTTTTTCCTGTTATTGACACCTTTTGTATTTTTCGTGGTTTCGATTATGGAGGATTAGGGCGTTTTTAGTAGGTTCATTGTTCGTTCCCATGGTAACGTGATTATTGTCTAGATTCTTCGTTTCATTCCCCATCATCTTCTATCCCTTCTCTGTGTGGGGAGCCAGGGAACAAACCTGATATTCAAGTTTATGTGTTGGCAGAAGAGAAGAGAACGACGAACTCTTATGTCATTGAGATTGGTTCCGATAACAGAGTGGGGAAGAACAAAGCAGTTGCTCTTGATGAAGTGATTGCTTGGGCAAAAGAAAACCAGTTGGTCCTGTCAATTCAGGCCGGTGGGAGATTTTCGCATCTGCTAGGAATACTGGTATGATTCCAAGCCCAAGGCTGTAGGAAGTAATTGTTGTTTATAAGTTTATTTTTAGTTTCATTATTTGTTGGCTGTGAAGTCGTGGATTGTAGCTTTAGCTGCTTTATTCATGAAAAAAGATGTACTGAAAGTAAATGATGAATCAAAAAGCCTAATATCATGAAAGTCCTTTTTCTTAAGGAAGAAGTGTTCTGCAGGGGCCTCCCTTGCTCAATGAAGAACCACGGAATTACTGTCCTTTTATCTTCCATAAGTTCTTCACCATATTTTTTGAGGAAGCAATTAAGAAAACTCTAAAAGATCAAGGAAGATGTTATAGATTAAGAAAACAGCAAGTTCTGGAAAGTTTGATTTTGAGATGTTATAGTTTTCAGTATTTGCTTGTCTTTCAATGTTAGTGTGCCATATTTCTTACAATAGTATTCCATTTTCTGAACTTGCACAGATTTGCATTTAGATTCATCTAAAAGATCAAGGAAAAAGTACTCTTCTCCACTTTTTAAACAATGATGGCAATCAATTTGTTGAAATCGAAGGTACTTTCTTTGTTCAACTTAATGATTTGTCTGCATTGAAGATCAATGCATAATTATTTTTTTAATTAATAATATCATGCAGGATGGTCCGATTCATGTAACATTTGTTGTAAACAATTTGGGATGCATGAAATATAACCACACAACGCACTAAGGTAAGCCATTGCTTTTACAAAACTTTTATCATTCTATTTACTGGTCAAACTTGAACAAAAATAGGTAAGGTTCACTTTTAATGGTTTCAAATTATCCGTATCTCATTGGTTTGACATTATTGTTCATACTTCCTTTGCTATTGGAGAAGATTTTGATTAATAACCATGTTATGAAAATTTCAGATGGAAATGGAGGACATAGATGGAGATAATAAAGTTGAGGTCAAGGAATCCAACTCTAGTTGCTACGTTCAACACTCCATCACGTAAGAAATTATCTGTTTGACATCATAAACTACCTTATGTGTTGCCTAGATCTCATGAGAATTACGTTATTGGCAATGTTGTGGTCCTACTAATGTTAGATTCCTATATTTAATCTTTATTGTATCTTTGTTTTTTCCTTTTAATGTTCCTTGTGTTCTACTGATATCATGTTTTTGGTTCAAGAGTAAACGATTAAAATGTTAAAGTCGAAAGGGTTCATGAGTAAGAAATTAAATTAGGTTTTTCTATTTTATGAGTGTTTTAGGTAGTTAGTAAAACCGAGTGAAAAGCCAGACTTCTGCAATTATAATAAACCCCATGAATCTATCTCAACGTTCCAATTTCCAAAGAGACAATGTAAAACTCAATGATCAAAGAATTCCATTTCAAATCAATCAAACAATTAGGAGCACATCATTGGTCATTACTTACTCCACATTCGGCATAAGAGAAACCGTGTCACAACATATAGGCGAATTGCCCACAAAAGTTGTAGAAAACAGACAGACCTAAGTAACAAAACGAACTAGAACAAATAAAAAAAAACAAAATTCAGAAGAATAGTTCATGAATAAGAGGCAATGATGAGTGGTAAGGTGAAGAAAGAGAGAAATAGGAGAAAGGGGTAGAAAATTAGGGCTGGTGCAGACTCATCTGGGCATGTGGAAGGGGAAGGCTCAGAGTACAGAGAGCACTCTTTGAGTTTGTCCTTTCCTCTCTGTTTCAGTTTCATCGCCCCTCATTTTGCTTGTTTGGCTTATGACTAGGCTTTCTCCAATGTTTCATTGCCACATCATCAATATAACAATTTATTCTCATTATCCTTCCGAGGGTCAAGGATTAAGTTGTAAAACCAAGAAACGAACTTAAGACTCAAAGAACTTGTCTTATGGAAGGCCAAAGGTAGTTACAAGATTTGTAATACCAAGAAAAGATGAACTTAAGAACTAAAAAACCCTCCCTTGTACAAGAAGGAACAAAAGGAACATGTTTCTTGTACAAAAGGAACATGTAAGACATGATCTTGAAAGATGATAAGCTCTACGATATAAGGAAACACAAGGATGACCAAGGAAGACTTGTCAATCTCAACAAAGGATGTTAAGAAGACACTCAAAAGGAACAAATGCTAGAACTAGAAAACGGCTTAAGGCATAAGTTAAGAACTAAAGGCCACAAGGGCTGATTATAAGGATTATGGAAGGCCAAGAGTAGTAAAAGGATTAAGAAAAGCCTAGTAATACTGAGAAAAGAAGAACTTAAGATCCAAACAACCTGCCCTGTACAAGAAGGAACGAAAGGAACATCTAATGTTTGTCAATTTCAACAAACGATGTTGTGAAGACAGTCAAAATAAACAAATGCCGGAACAAGAAAATGTCAAGTACACACCTTAAGACATAAGTTAAGAACTAATGGTCACAAGGGCTGATTATAAGGATTATGGACGACTTAAGGGATGTTACAAAGATTAAGGAAGACCTTGTAATATTGAGAAAAGAAGAGCTTATGACCCAAAGAACCTACCTTGTACAAGAAGAAACAAAAGGAACAATGTCGAAACAAGTACATGCTTTAGGCATGAATTAAGGACTAAAGGTCACAAAGGCTTATTATAAGGATAATGGACTGCCAAGGAGTTTTACAAGGATTAAGAAAAGCCTTGTTATACCGAGGAAAAAACTTAAGACCCAAAGAACCCACCTTGTACAAGACGTTACAAAAAGGAACATCTAAGCTACGATCTTGAAGAAAAAAACATTGATTATGTTAAGGCCTGTTAAACATAAAGACGATAAGATCTACGATATAGGAAAATACAAGGATGACCAAGGAAGACTTGACAATCTCAACAAAGGATGTTAAGAAAATAGTCAAAAGGAACAAATGTTGGAACAAATACATGTATGAAGGTATAAGTTGAGAACTAAATGTCACAAGATTAATTATAAGAATTATGGTGCCCAAGGAATGTGACAAGGATTAAGGAAGGTAGTTATGCTGAGAAAAGAGCTTAAGACCTAAAGCACCCGCCTTATATAAGAAGGAACAAAAGGAACATCTAAGATAGGACTTGACAATCTCAACAAAGAATGTTGAGAAGGCCGTCAAAATGACCAAATGTCGGAAGAAGTACATGACTTAAGGCATAAGTTAAGAACTAATGGCCACAAGGGCTTATTATAAGGATTATGGATGGCTAAGGGATGTTACAATGATTAAGAAAGGCCTTGTTATACAAATAAAAGAAGAACTTAAGTCCAAAACAACCCGTCTTGTACAAGGAACAAAAGGAATATCTAAAATAAGACTTCAAATGTCGAAATAAACACATGACTTAAGACTTGACAAATAAAAGGAACATCTAAGATACGACCTTATTATGTCAATGTTTGTTGAACATAAAGATGATATGCTCTACGATAGGAAACACAAGGATGAAGAAGGAAGACCCATCAATCTCAACAAAGGATGTTGAACCAAGTACATGCCTTAAGACATAAGTTAAGAACTAAAGGCCACAAGGGCTGATTTTATAGATTATGGACGACCCGTAGTAGTTACAAGGATTAAGGAAGGTCTTGTTATACTGAGAAAAGAGGACCGAAAGAACCCGCCTTGTACAAGAAGGAACAAAAGGAACATCTAAAATAACACTTGACAATCGCAACCAAGGATATTGAGAAGACATTAAAAAAGAACAAAGGTCGGAACAAGTACATGACTTAAGTCCCAAAGAACCCATCTTGTACAAGAAGAAACAAAAGGAACATCTAAGATACGACCTTGAAGGAACAACGTTGATTATGCTAAGGCTTGTTAAATATAAAGACGATAAGCTCTACAATATGACTTGACAATCTCAACAAAGGATGCTGAGAAGACAGTTAAAAAGAACAAGTACATGCCTTAAGGCATAAGTTAAGAACTAAAGGCTACAAGGGCTGATTTTATAGATCATGGACGACCCATGATAGTTACAAGGATTAATGAAGGTCTTGTTATACCGAGAAAAGAACTTAAGACCCAAAGAACCCGCCTTGTACAAGAAGGAACAAAAGGAACATCTAAAGTAACACTTGACAATCACAACAAAGGATATTGAGAAGACATTCGAAAGGAACAAGAGTCGAAATAAGTACATGACTTAAGACATAAGTTAAGAACTAAAGGCCACAAGGGTTGATTATAAGGATTATGGACAACCTGTAGGGTGAGGGGAGTTCTGCCTCGGGGCTGACCCTTCGAGCAGTACAGGAAGCATCGAATGCTCTTGTTAATGAATGAAAGGGGTCGATCAAGAGAGATTTGGCAATTTCGGATGTTTCACTTTCATGGGGGAATCGACTCTACGCCCCCATTTCGGTGCTCCGCCTGCAACATCTTTTAAGTAGGGGTGCGCTAGACCGTTGACGAATGGCAGAGTTAGTGAGCCGTGTAATAGGCGACCATTTTGCGCGGTCATCTAAGATATGACCTTGAAGGAACGACGTTGATTATGTTAAGGCTTGTTAAATATAAAGACAATAAGCTCTACAATATAGGGAAACACAAGGATGACCAATGATGACTTGACAATCTCAACAAAAGACGTTGAGAAGACAGTTAAAAGGAACAAATGCTAGAACAAGTACATGCCTTAAAGACATAAGTTATGAACTAAAGGCCACATAGGCTGATTTTATAGATTATGGACGACCAATGGTAGTTACAAGGATTAAGGAAGGTCTTGTAATACAGAGAAAGAAGAATTAAGACCCTAAGAACCCGCCTTGTACAAGACGGAACAAAGGAAGACCTTGTAATACCAAGAAAAGAAGAATTTAAGACCCAAAGAACCGGTGCCTTGTACACGACGGAATAAAAGGAACATCTAAGCTACGACCATGATGGAACAACACTGATTATGTTAAGACTTAAGACATAATTTAAGAACTATATGTCACAAGGGCTAATTTTAAGTGCTTGACTAGGTATGTACACTTTTAAGACTTTAAGATAAGTATGCCAAAGGATTTTAAGTGCTTGATTAACTTTAGGATTACTAAATAAGTTAAGACTCTTTAGACCTCAAAGAACACTGTCTCCAGAAAAATATCAATGTTAAGGATTAAGGAAAGTCTTGTAGCACCATGAAAGAAGAACTTATGTCCAGACTTGTTTTACATAAGAAAGAAAATATGCGCTCAAAGAATAAGGAAACGTAAGGATGACGAAGGAAGACTTGTCAATCTACGATACAATCTTGAAGGAACAATATTGATTATGTCCAGACTTGTTTTACATAAGAAAGAAAATATGCGCTTAAAGAATAAGGAAACATAAGGATGACGAAGGAAGACTTGTCAATCTCAACCAAAGATGTTTGAGAAGACCGTCAAAAAGTGAAAAAAGTACATGGCCTTAAGGCCTAAGTTAAGAAATAGTAAGCATTAAGGGCAAAAAGGTCTTTTTATTTTTATTTTTTAATTTTAAGTAAACTTCTTGAATTTTTAATTTCTTAGGGGAAGGAATTTCAAGAAGCCAAAAAGGGCCATTGTTTTTTTTTTTTTTTGAAAAAGTTAGGATTTTTTAGAATAAAATGTTCAAAATGTAGCAATTTACCGAAATACCCCTGAGTTTCCAATTATTTACAAAAATGCCCCTAGCCAAGAATTCTTTCCTGATTCGTTTAGTGAAGGTCAACGGTATTTACGAGGATTAAGGAAGACCTAAAACACCAAGGAAAGAAAAACTTAAGACCAAGGAACCACCTTCTACAGAAAGGAAGAAAAGTACTCTCTTATAAAGAACAATGTTGATGACATGGAGGCTCGTTGAACATATGGAAAAAGATAAGCTCTAAAATATAAGGAAACGCGAGGATGACCAAGGAAGACTTGTCATTCTCAATAAAGAATGTTGACAAGACAGTCAAGGGGCAAATGTCGGAACAAGTACACGACCCTAAGGAGACCTATATCATGACCAAATTTGGGTTTTGCTCCCGTGAGGATTAAATTTTCCAACAAACTTTTATGGTTAATAACTCGAGCTATAGTGCACGCCAAGGTATGAAATCGACCTCATTCTCTTCCTTGATTCAGCATCTACAAGCTTCATAAAGAAATCAAGGCCAAGGGAATGTCGTTTTCAAATGGAGGAGCATTGGCACGAATCGTCTTCTTCCACTGTCTGTGAAAGAAAACGATGACGTTGTTGGTTCAGTTGAACCGGTCACATCAGCCTAAAATGTGACCTTCCCTCGGGTTTCCTTAAAATTAGCCCCCTTCTAGACTAATTCTCAAGAAATTCTCTTTGGTTCCTGAAAAAACCCTCAAAGATGGACCTACCAAAGAAATTTTTTAGTAATTCAAATACTGAAAGCTCGAGAACAAAGAACCCAAACATCAACGAAATTGGACCGAAAGTTAATAAGGAGCTAAATCGACGTTTTTTTCTTGAAAATCCAAGTAACATTAAGATAACCCACTAAATGGATTCCACTTCTCATGAACTTTTAATAGAAGGCTTAAGATGACATGTTAAGGATATATATGAAGTTTGATGGTCATTGAAGTTTGGTAGGGGGTAAAACGAGGATAAATGCAAGATGACCAAAATGTCCCTATTATCCAAGTGTTGATTTATGAACTCTAAATGACCTAAGATTTTATTTATAGCCTATTGGTTATGCAAGATTCCAAAGTCATGGGAGCATATTTAGGTGGTTAAATGAAGAACTAATGGTTAAATGACTAAAATGCCCCTAAGATAATCCTAAGCTATTACAAGATTAAGAAGACCTTATTTAAGGGGACAAAGGTCTACCCATGAAGTTGAGGTTTATAAGGACATGCCAGAGAAGGACAAACCTATAGAAGACTCTCAAGAAACTTGGAAGAACATAAGGACCTTAAGATGTTTTCGAAGCCCCAAGGAACTCTAAACGTTATGAAAAAGAGACTTATGTATGATCCTAAGGACAATTACACCAAGGTAAGAATAAGAACTTTCAAATTGAAGAGAATTTGTAAGACCCCTAGCAAGTTTAAGTTGCTCAAAAAAAAAGTCTACGGGATCCCAGGAAAGGATTAAGACCCAAGCAAGGTTAAGGGCGGAAAAAAGAGCCTTTTGAAAAGGTTGGGAAAAAACAATAGTAAGCATAAAGGGCAAAAGGTCAATTTTTCAATTTTAAGTAAACTTTTTTTTTATTTTGAATTCCTTATGAAGCAGGAATTTCAAGATGCTCGAGATGAAAAAAAAAATTACCAAAAATAGGTAAAGCATTTTTAGGAAAAGTTTGGATTTTCAAAATAAAATATTCAAATTGTGGTATATTTACGAAAATGCCCCCAGCGAGAAAATCTATCCCTGATCCATTTTTGGTAGGGGTCAGCTAGACAAATGCTTCCATCTCTCAAGTTTCAACCGTTGAATTTTTCCCACAATTGGATATGATTTAGAAGACTCAGATACCTTCAGATCTAACGGTTGGTGTTCAAAGATGAAGTAGACAACACCCTCGTTGAACCCGCCTTCTACAATAAGGAACAAAAAGACTCTATAATACAACTTTGAAGGAGCAAGACTTGTTGAACATAAAGAAGAAGTTAATCTTTAAGATATAAAGGAAATACAAGGATGACCGAAGAAGACTTGTTAAATTCAACGAAGGATGTCGAAAATTGAGAATACAGTCAAAATGGGCAAATTTGGAACAAGTACACAACCTTAAGGTATAAGATAAGAACTAAATGTCACAAGAGAAAATTGTAAGAACATGGAGAAGGAGAAACCTAGGAATGAACCCTCAAGAAATTTGGAAGGGCATAACTAAGGACAAATACCCAAATGCAAGGTAATAACAAATACCAGTATCGTTGTCTCAAAGGTTGATGCAAGCTTCATCTACAAATAAGAAGATATGGACAACATTTAGGGACAAGAGTGAGGACTTGAGAGTACAAGGATTAATGAAGGGTAAGAGTAATTACAAGGATTAAGGAAGACCAAGGAAAGAACTTAAGACCCTAAGAACCCACCTTGTACCATAAGAAACAAAAAGAACCTTTAAGATAATAGAATCTTGAAGGAACAAGGTTGATTATGTCAAGACTTCTTGAACTTAAAGGAAAAAGATAAGGTTTAGGATATAAGAAAGCGTAAGCATGACCAAGGAAAACTTGTCAATTTGAACCAAGGATGTTTAGAAGACATTCAAAAAGGATAAATGTCGAAACAAGTACATGGCCTTAAGGCATAAGTTGAAAGGGGTAGATTATAACAAGTTGGAAAAGGACAAACCTATAAAAGGACCCTCAAGCAGGACATAATGAAGGACAAGTACCCCATGGCAAGGTAAGAACAACAAACTTTCGAGAATAAAAGTTTTTAAGAGGGGGAGAATTTGTGAGACCCCAAGTAAAGTTAAGACACTCGAGTAAGTTTAAGGTGGGGCCCAAGGAAGAGATTCTCAATGCTCTAAAATGTCATTTTTCCAATTTTAAGTTAAGTTCTTGAGTTTTTCATTTCTTAAATCTTCCATATCTCAAGATCCGACCGTTATTTGGATATGATCTAGAAGACTCAGATATCTTTAGATCTAACGGTTGGTGTTCAAAGTTGAAGTCTATAACACCCTCATCGGAGTAGATTTTTTCGCTGGACCTTTAGGTACAAGAGTAGAGGCTAGAGAGTACAAGGATTAATGAAGGTCAAGGGTGGTTACCAGGATTAAGGAAGACCTTATAACACCAAGGAAAGAAGAACTTAAGACCCTAAGAACCTTGTCATCTCAACCAAGAATATTCAAAAGACCGCCCAAAGGGGCAAATGCTAGAACAAGTACATGGCCTTAAGGCATTAGTTAAGAACTAAATGCCACAAGGGTAGATAATAAGGACAGGTCAAAAAATGAAAACCCTATAAAAGGACCCTCAAGAAACTCAGAATGACATAACCAAGGACAAGAACCTAGAGACAAGGTAAGAAAAATGAATTTTGGGGGACAAAGGGGAGAATTTGTAAGACCCCAAGTAAGGTTAAGACACTCGAGTAGGTTAAAGTTGTAAGAGACCCAAGGAAAGTTAAGGAGACCCAAAAAAGATATTCTCAATGACCTTGCAAAGTTTGATAGGGATGGAAAAGGTTTGGAAAAGAAATAGTTAACTTAAAAGGTAAAAAGGTTGTAACACCAAGAAAAGAACTTATAGACCCTAAGAACCCGCCTTGTACAAGAAGGAACAAAAGGAACCTCTAAGATATAACCTTGAAGGAACCATGTTCATTATGTCAAGGTTTGTTGAACATAAAGAATAAGATAAGCTCTAAGATATAAGTAACAAACGAATGACCAAGGAAGACTTGTTAATCTCAATAAAAGATATTGAGAAGACAGACAAAGGGGGCAAATGGCTTAAGGCTTAAGTTGGCAAATTATAAAGATATGTGGGAGAAGTTCAAACCTATAAAAGGACCTTCAAGAAACTTGGAAGGATATACTAAAGGCCACACGGGCAAATTATAAGGATATGTTGGAGAAGTTCAAACCTATAAAAGGACCCTCAAGAAACTTGGAAGGACATAAGTGAGGGCAAGTCACAAAAAAAGAAAAAAAATATGTCAATTTTCCAATTTTAGGTAAACTTCTCGAACTTTTAATTTCTTATGGGAAGAAATTTCAAGATGCTCGAAGGGAAAAATGAAGGGGAAAATGAATAGATTTGGATAGTGTTTGGATTTTTCGAATAAAAAATTCAAAATGTGAAAAATTACCAAAATACCCTAAACTTCCAATTATTTACAAAAATGCCCCTGACTAGAAATCTTTCCAGATTGGTTTACAGCCGGGGTCATCTGGACAAAATCTTTCATATCTCAAGATTCAATTATTGAATTTGTTCCAAATATGGATATGATCTGGAAGACTCATGTTCAAATCTAACGACTGGTGTTGAAAAATGACGTTGGAAACATCCTCATCGAAGTAGATTTTTCCAATGGACCTTCCTTTAGTTTCAAGTTTAAAATCAGCACTATTTTGTATGTTTCTAGTTCGTTGCAAGCTTCATCCACAAATGGTAAAATGTGGGCAACGTTTAGGGATAAGAGTGGAGGCTCGAGAGTAGAAGGAACCTCTAAAAGACCCTTAGAACCCCCCTTGTACAAAAAGAAACAAAAAGAAGAACAAGGTAAATGGAATAGGTGTTTGTTGAACTCGGCTCGGTCTCTCTTTGCTTTCCTTTGACTCTAAGATACAATCTTGAAGGAACAATATCGATTATGTCAAGACTTGTTGACCATAAAAAGATAAGCTCTAGGATATAAGGAAACTTCGGCCAAGGAAGACTATTTAATCTCAACAATAAATTATCACGATAGAAATATGGTACTTTTTTAGAATGATCTATAGGTTTCCTTGACGAATTAAATGAGATGATATCCTTTCTTTAATAAGAAAAAGATCCACCGTGTACGTTTTTACTTAATTCTAGGGTGTGCAAGATGTATACTACGTCAGCTACCTTGTGTTAAAGTCATGGCTTGGTCATCTGATGAAGGGAAAGAGCTCCAATAGAATTTGAAAACCTTAAGAGATGCTTTTTGCACCATTTTCTATTGAACCTACGACATTATAATTTCATTCGTTTCATTTAAAACAGGTTTTTCTTATTTTCCTTGGTTAGGTAAAAATACTAATTTCAGGCACGACTTTTGTTTTGTCTTTATTATATTTTACATTTTAGTTTGTCTTCATTAGTAAATTGACTCAGTATACGTGTTTATTCTTTATATATTTGTACATGTTCACTCCTGTATGCTCTCGCCATCGAACCATTCACAAATTAGTAATTAGTGTATTAATATGTTAGGTTATGAAGTCTGCTGGTTATTTATAGCTTAGTCAACGGTTATATATGGTAAATGACATATAAAGTAAATTGCCATAAATAGTAAATTGTTTTGTAGAGTAAAAAGCTATATCTGGTAAAACTATATATGGTAGATAGTTATATCTAGTAAAACTATATATAGTAAACTGAATTATATATATCTCAGAGCTTTGAAAATGTACTTTCTATATTTCTATGTATTCTCTCTTACTGTGCATATCTGTAGTCATCAATACAAATCTTTTAGTCAATATTCTCCTTCCATTTTCTCTATATTGTTCTTTGTGTTCATCTAGATCGAGTGTGTGCGTTGTTGTGTGATCCCAACAACTGGTATCAGAGCTAGGCTAAATTTACCACGATCATTGAAGATGGAAAGTTCAAAGATTAGAATTGAGAAGTTCGATGGATCCGATTTCGGTTTCTGGAAGATGCAGATTAGAGATTATCTGTACCAAAAAGATCTTCACGAACCCCTATTGGGGGTGAAGCCAGATACCATGACCACGGAACAATGGAAGCTCAAGGATCGACAGGCCTTATGGTTGATCCGGTTGACGCTATCCATAAATGTAGTGCTCAACATCATTAAGGAGAAGACAACGTCAGATCTGTTGAAGGCGAAGTAAATCGAAGGACCCAAACAAAGGGCGATCAAAATCAACGTCTTTTCATTCGTTTCCAAATAAAGAGTTGTTTCGAAATTTCAAGTTTGAAAATTTTGAGAAGGTGTATCTTGCCAACAACAAAGATTTTGAGATTAAAGTAAATGGGAATGTCTGCATAAAAACACGGGCAGGAAATCAGTGGACATTAAATGATGTCAGATATATTCCTAGTCTCAAGAAGAATTTGATCTCTATTGGTCAGTTGGACAACACAGGTTATGCAACAGAGTTAGAGAAGAGTTCGTGGAAGATTATGAGGGTGCTATGGTGGTAGCACATGGCATAAAATCTGGACTGCAAGGTGTGAACATGGCTGCTGTTGCTAAGAATGCTTTAAATTCAAGTCTATGGCATAATAGACTTGGATATATGAGCGAAACGAGTTAGCTTCACAAGGACTACCAGCAAATTGAAGAAAGTACGGTTGGAAATGATCCATACAGATGTGGAGCAAGGTTCCAAAACCACAAAGCAAGTGGGAGTTGAGCATGAGTTGCAGGGAAACTCACCTAGTGATGTTGTAGCAGATACTCATGAAACTCCTGAGACTACTGCTGAGGAACCAGATGTGGAACAAGGTTCCAAAACCACGAAGCAAGTGAGAGTTGAGCTTGAGTTATAGGGAAACTCACCTAGTAATGTTGTAGCAGATACTCATGAAACTCCTGAGACTACTACTGAGAAACCAGATGTGGAGCAAGGTTCCAAGACCACGAAGCAAGTGGGAGTTGAGCTTTGAGTTGCAGAGAAACTCACCTAGTAATGTTGTAGAAGATACTCATGAAACTCTTGAGACTACTGCTGAAGAACCAGATGTGGAGCAAGGTTCCAAGACCACGAAGCAAGTGGGAGTTGAGCTTTGAGTTGCAGAGAAACTCACCTAGTAATGTTGTAGAAGATACTCATGAAACTCTTGAGACTACTGCTGAAGAACCAGATGTGGAGCAAGGTTCCAAGACCACGAAGCAAGTGGGAGTTGAGAAACTTCTGAGACTACTGCTGAAGACCCAGATGTAGAACAAGATTCCAAGACCACGAAGCAAGTGGGAGTTAAGCTTGAGTTGCAGGGAAACTCACCTAGTGATGTTGTAGCAGATACTCATGAAACTCCCGAGACTACTGCTGAGGAACCAGATGTGGAGCAAGGTTCCAAGACAACGAAGCAAGTGAGATAGATAGTTTATATATAGTAGATGGTTATATCTGGTAAATGTATATATAGTAAGCTAAATCATATATATGTACTTTCTATATTTCTCTGTATTATCTCTTACTGTACATATCTGTAGTCGTCAATACAAATCCTTTAGCCAATATTCTCCTTTCATTTTCTCTATATTGTTCTTTGTGTTCATCTAGATCGAGTGTGTGCGTTGTTGTGCGATCCCAATATAGTAGGATCCTTTTGTGATGCACTTCTTAATAGAATGAGTTCTAACATCAAAGCATCATAAATTCTACTTTAATCATAGTGAGTTGGCTCTTGATCAGCAATAAAATTTATTTCTCTTGCTATTGAGCCGATGATTCGATCAAGATTTAAGAAGCTAGCTGATTATTCCATAGAATTTAATTGTCCACAAGCTTCTTAAATCATGACCGAATCATCGGCTCAGTAGCAAGAAAAATATATTTTACTGCTGATTAATAATCAATTCACTATAACTTGTCCAAAGTCTTGTAAAGCTATTGATGAAGATTGAGCTGGTATGTTACGAAGACTTGATATTAACGTAGCATATTTGACTCCTTGTAGCTTTATGCTCAAAGTAGACAATATCATACTATTGTGGAGGTCGTGGTTTCTAACACACCAGTCGTGAAGGCTTCAACTCTAATCTAGATTAGAATATTCTATAATTTGAGAATCACATGCATGTATCTGCTGTAATGGAGTGGGATTCTACAAATATCGACTCGATTTGTTAATAATACATGAAATCTTTGGATGTGTATGTGTTACATCATGTAGAGCCCCAATTGCACTTATATAAACGGTAGGATTAGTCATTTACCTGGCCATCATGTGTTGTACTGTTGGAGTAGAACAAGCCTTATTCTAAGGCTTTCCATTTTCTTCAGTGTAATCTGGAACCATTAGCCATAGAGATTAAACTATCCACAGTAGGATAGGATACATAGCTCATGTGTTTGATTTGTTTGAGCTGAGATCCTAGGAGTGGTAGCTTCAATTGATAGATACAAAACAATTGATAGAGACTTTTGTATGTGGTATGTTGATACATAGTTCATGTGTTTGAGTTGAGATCCAAGGAGTGTAGCTTCAATTGATAAAGACTTTTGTATGTTGTATATTGATATTTTCTGAAACATTTCTTGTCATTTTTGTAGATGGAGATTGATTATGCTATTCATATTTCTTGTCGTTTTTGTAGGCTGAGATGGATTATGCTGAATAGAACATCAACTCTAATAATCAAAGTACAGGTCAGCGTAACTATTGAATTCTATGATGCACACTCAATTGCCTAATTCACGAGTAGATTTCACAGTTCGTAGAGCCGTATGCGATGTTCTCGACAAGAGCGATCGCGATGCGAACAAAGGCTTCGCGGCGGATGATTTGGAGAAGGATGCTGTCAATAACTACATGAGATTAATAGGCCTTGTTCTTTTAACCATGGCATGTAGTAATAATAATAATCCGACAAAGAAAGTCTGA

mRNA sequence

ACTAGAATCAGAGCGCTCCATCAACGGCCTCTTCCCTTCCGAACGTTCGTTGCCGAATTCAAACGCTAGATAATTACCTAGCAATCGGAGGAAGAGACAGCAGAATCGAAAGGAGTTTCTCGCCTGATCCCGGTGATGAAAAATAGAGATTCTTCGTTTCATTCCCCATCATCTTCTATCCCTTCTCTGTGTGGGGAGCCAGGGAACAAACCTGATATTCAAGTTTATGTGTTGGCAGAAGAGAAGAGAACGACGAACTCTTATGTCATTGAGATTGGTTCCGATAACAGAGTGGGGAAGAACAAAGCAGTTGCTCTTGATGAAGTGATTGCTTGGGCAAAAGAAAACCAGTTGGTCCTGTCAATTCAGGCCGGTGGGAGATTTTCGCATCTGCTAGGAATACTGTTTCATTATTTGTTGGCTGTGAAGTCGTGGATTGTAGCTTTAGCTGCTTTATTCATGAAAAAAGATGTACTGAAAGATGGTCCGATTCATATGGAAATGGAGGACATAGATGGAGATAATAAAGTTGAGGTCAAGGAATCCAACTCTAGTTGCTACGTTCAACACTCCATCACAGCCGTATGCGATGTTCTCGACAAGAGCGATCGCGATGCGAACAAAGGCTTCGCGGCGGATGATTTGGAGAAGGATGCTGTCAATAACTACATGAGATTAATAGGCCTTGTTCTTTTAACCATGGCATGTAGTAATAATAATAATCCGACAAAGAAAGTCTGA

Coding sequence (CDS)

ATGAAAAATAGAGATTCTTCGTTTCATTCCCCATCATCTTCTATCCCTTCTCTGTGTGGGGAGCCAGGGAACAAACCTGATATTCAAGTTTATGTGTTGGCAGAAGAGAAGAGAACGACGAACTCTTATGTCATTGAGATTGGTTCCGATAACAGAGTGGGGAAGAACAAAGCAGTTGCTCTTGATGAAGTGATTGCTTGGGCAAAAGAAAACCAGTTGGTCCTGTCAATTCAGGCCGGTGGGAGATTTTCGCATCTGCTAGGAATACTGTTTCATTATTTGTTGGCTGTGAAGTCGTGGATTGTAGCTTTAGCTGCTTTATTCATGAAAAAAGATGTACTGAAAGATGGTCCGATTCATATGGAAATGGAGGACATAGATGGAGATAATAAAGTTGAGGTCAAGGAATCCAACTCTAGTTGCTACGTTCAACACTCCATCACAGCCGTATGCGATGTTCTCGACAAGAGCGATCGCGATGCGAACAAAGGCTTCGCGGCGGATGATTTGGAGAAGGATGCTGTCAATAACTACATGAGATTAATAGGCCTTGTTCTTTTAACCATGGCATGTAGTAATAATAATAATCCGACAAAGAAAGTCTGA

Protein sequence

MKNRDSSFHSPSSSIPSLCGEPGNKPDIQVYVLAEEKRTTNSYVIEIGSDNRVGKNKAVALDEVIAWAKENQLVLSIQAGGRFSHLLGILFHYLLAVKSWIVALAALFMKKDVLKDGPIHMEMEDIDGDNKVEVKESNSSCYVQHSITAVCDVLDKSDRDANKGFAADDLEKDAVNNYMRLIGLVLLTMACSNNNNPTKKV

Homology

[Close]

BLAST of CmaCh01G011830 vs. ExPASy TrEMBL
Match: A0A6J1CXD8 (uncharacterized protein LOC111015698 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111015698 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.8e-12
Identity = 44/64 (68.75%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 9   HSPSSSIPSLCGEPGNKPDIQVYVLAE--EKRTTNSYVIEIGSDNRVGKNKAVALDEVIA 68
           +SPSS++ SLC   G KPDIQ+ VLAE  E    +SYVIEIGSDNR G N+AVALDEVIA
Sbjct: 245 NSPSSAVSSLCEVSGAKPDIQINVLAEEDEDEVMSSYVIEIGSDNREGTNEAVALDEVIA 304

Query: 69  WAKE 71
           WAKE
Sbjct: 305 WAKE 308

[Close]

BLAST of CmaCh01G011830 vs. ExPASy TrEMBL
Match: A0A6J1CZJ0 (auxilin-related protein 2 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111015698 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.8e-12
Identity = 44/64 (68.75%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 9   HSPSSSIPSLCGEPGNKPDIQVYVLAE--EKRTTNSYVIEIGSDNRVGKNKAVALDEVIA 68
           +SPSS++ SLC   G KPDIQ+ VLAE  E    +SYVIEIGSDNR G N+AVALDEVIA
Sbjct: 245 NSPSSAVSSLCEVSGAKPDIQINVLAEEDEDEVMSSYVIEIGSDNREGTNEAVALDEVIA 304

Query: 69  WAKE 71
           WAKE
Sbjct: 305 WAKE 308

[Close]

BLAST of CmaCh01G011830 vs. ExPASy TrEMBL
Match: A0A6J1CYQ8 (uncharacterized protein LOC111015698 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015698 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.8e-12
Identity = 44/64 (68.75%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 9   HSPSSSIPSLCGEPGNKPDIQVYVLAE--EKRTTNSYVIEIGSDNRVGKNKAVALDEVIA 68
           +SPSS++ SLC   G KPDIQ+ VLAE  E    +SYVIEIGSDNR G N+AVALDEVIA
Sbjct: 245 NSPSSAVSSLCEVSGAKPDIQINVLAEEDEDEVMSSYVIEIGSDNREGTNEAVALDEVIA 304

Query: 69  WAKE 71
           WAKE
Sbjct: 305 WAKE 308

[Close]

BLAST of CmaCh01G011830 vs. ExPASy TrEMBL
Match: A0A6J1CYA6 (uncharacterized protein LOC111015698 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111015698 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.8e-12
Identity = 44/64 (68.75%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 9   HSPSSSIPSLCGEPGNKPDIQVYVLAE--EKRTTNSYVIEIGSDNRVGKNKAVALDEVIA 68
           +SPSS++ SLC   G KPDIQ+ VLAE  E    +SYVIEIGSDNR G N+AVALDEVIA
Sbjct: 245 NSPSSAVSSLCEVSGAKPDIQINVLAEEDEDEVMSSYVIEIGSDNREGTNEAVALDEVIA 304

Query: 69  WAKE 71
           WAKE
Sbjct: 305 WAKE 308

[Close]

BLAST of CmaCh01G011830 vs. ExPASy TrEMBL
Match: A0A5A7UBI6 (Auxilin-related protein 2 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G001210 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 4.0e-12
Identity = 44/63 (69.84%), Postives = 49/63 (77.78%), Query Frame = 0


Query: 9   HSPSSSIPSLCGEPGNKPDIQVYVLAEE-KRTTNSYVIEIGSDNRVGKNKAVALDEVIAW 68
           +SPSS+I SLC   G  PDIQ+ VLAEE     +SYVIEIGSDNR G N+AVALDEVIAW
Sbjct: 245 NSPSSAISSLCQGSGANPDIQINVLAEEDDEVMSSYVIEIGSDNREGTNEAVALDEVIAW 304

Query: 69  AKE 71
           AKE
Sbjct: 305 AKE 307

[Close]

BLAST of CmaCh01G011830 vs. NCBI nr
Match: KAG7015246.1 (hypothetical protein SDJN02_22880, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 124.0 bits (310), Expect = 1.4e-24
Identity = 63/72 (87.50%), Postives = 65/72 (90.28%), Query Frame = 0


Query: 1  MKNR--DSSFHSPSSSIPSLCGEPGNKPDIQVYVLAEEKRTTNSYVIEIGSDNRVGKNKA 60
          MKNR  DSSFHSPSSSI SLC EPGNKPDIQ+YVLAEEKRT NSYVI IGSDNRVGKNKA
Sbjct: 2  MKNRGNDSSFHSPSSSISSLCEEPGNKPDIQIYVLAEEKRTANSYVIAIGSDNRVGKNKA 61

Query: 61 VALDEVIAWAKE 71
          VALDEVIAW K+
Sbjct: 62 VALDEVIAWQKK 73

[Close]

BLAST of CmaCh01G011830 vs. NCBI nr
Match: KAG7030840.1 (hypothetical protein SDJN02_04877, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 123.2 bits (308), Expect = 2.5e-24
Identity = 66/86 (76.74%), Postives = 70/86 (81.40%), Query Frame = 0


Query: 5   DSSFHSPSSSIPSLCGEPGNKPDIQVYVLAEEKRTTNSYVIEIGSDNRVGKNKAVALDEV 64
           DSSFHS SSSI SLC EP + PDIQ+YVLAEE RTTNSYVIE  SDNR GKNKAV LDEV
Sbjct: 166 DSSFHSLSSSISSLCDEPMDNPDIQIYVLAEESRTTNSYVIEFCSDNREGKNKAVVLDEV 225

Query: 65  IAWAKENQLVLSIQAGGRFSHLLGIL 91
           IAWA E Q VLS++  G FSHLLGIL
Sbjct: 226 IAWATEKQFVLSLRLVG-FSHLLGIL 250

[Close]

BLAST of CmaCh01G011830 vs. NCBI nr
Match: KAG6600176.1 (hypothetical protein SDJN03_05409, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 123.2 bits (308), Expect = 2.5e-24
Identity = 66/86 (76.74%), Postives = 70/86 (81.40%), Query Frame = 0


Query: 5   DSSFHSPSSSIPSLCGEPGNKPDIQVYVLAEEKRTTNSYVIEIGSDNRVGKNKAVALDEV 64
           DSSFHS SSSI SLC EP + PDIQ+YVLAEE RTTNSYVIE  SDNR GKNKAV LDEV
Sbjct: 166 DSSFHSLSSSISSLCDEPMDNPDIQIYVLAEESRTTNSYVIEFCSDNREGKNKAVVLDEV 225

Query: 65  IAWAKENQLVLSIQAGGRFSHLLGIL 91
           IAWA E Q VLS++  G FSHLLGIL
Sbjct: 226 IAWATEKQFVLSLRLVG-FSHLLGIL 250

[Close]

BLAST of CmaCh01G011830 vs. NCBI nr
Match: KAG7011932.1 (hypothetical protein SDJN02_26840, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 98.6 bits (244), Expect = 6.5e-17
Identity = 61/121 (50.41%), Postives = 70/121 (57.85%), Query Frame = 0


Query: 13  SSIPSLCGEPGNKPDIQVYVLAEEKRTTNSYVIEIGSDNRVGKNKAVALDEVIAWAKENQ 72
           S +    G P +KPDI++YVLAEE RT NSYV EI S NR GKN AVALDEVIAW  E Q
Sbjct: 68  SQLTLASGTPRDKPDIKIYVLAEESRTMNSYVSEICSSNREGKNNAVALDEVIAWTTEKQ 127

Query: 73  LVLSIQAGGRFSHLLGILFHYLLAVKSWIVALAALFMKKDVLKDGPIHMEMEDIDGDNKV 132
           LVLS++  G FSHLLGIL                              ME+E++DGDNK 
Sbjct: 128 LVLSLRPVG-FSHLLGIL------------------------------MEVENMDGDNKD 157

Query: 133 E 134
           E
Sbjct: 188 E 157

[Close]

BLAST of CmaCh01G011830 vs. NCBI nr
Match: KAG7012279.1 (hypothetical protein SDJN02_25031, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 88.2 bits (217), Expect = 8.8e-14
Identity = 52/95 (54.74%), Postives = 56/95 (58.95%), Query Frame = 0


Query: 52  RVGKNKAVALDEVIAWAKENQLVLSIQAGGRFSHLLGILFHYLLAVKSWIVALAALFMKK 111
           R  +NKA ALDEVI WAKE QLVL       FS+LLGIL                     
Sbjct: 100 RTSENKAAALDEVITWAKEKQLVLL-----GFSNLLGIL--------------------- 159

Query: 112 DVLKDGPIHMEMEDIDGDNKVEVKESNSSCYVQHS 147
               DGP+HMEMEDIDGD+KVEVKESNS CY QHS
Sbjct: 160 ----DGPVHMEMEDIDGDDKVEVKESNSGCYFQHS 164

The following BLAST results are available for this feature:

BLAST of CmaCh01G011830 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh01G011830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CXD8	1.8e-12	68.75	uncharacterized protein LOC111015698 isoform X3 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CZJ0	1.8e-12	68.75	auxilin-related protein 2 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1CYQ8	1.8e-12	68.75	uncharacterized protein LOC111015698 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CYA6	1.8e-12	68.75	uncharacterized protein LOC111015698 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A5A7UBI6	4.0e-12	69.84	Auxilin-related protein 2 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of CmaCh01G011830 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7015246.1	1.4e-24	87.50	hypothetical protein SDJN02_22880, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG7030840.1	2.5e-24	76.74	hypothetical protein SDJN02_04877, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6600176.1	2.5e-24	76.74	hypothetical protein SDJN03_05409, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7011932.1	6.5e-17	50.41	hypothetical protein SDJN02_26840, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG7012279.1	8.8e-14	54.74	hypothetical protein SDJN02_25031, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CmaCh01G011830 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G011830.1	CmaCh01G011830.1	mRNA