CmaCh01G011720 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh01G011720
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	B-box-type zinc finger
Location	Cma_Chr01: 8518748 .. 8520133 (+)
RNA-Seq Expression	CmaCh01G011720
Synteny	CmaCh01G011720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCCCCTAATGTAAGGAGCTTGTACTTTCCCCTTCCTCTCCATTTATTCTTGGCCATTTCATTTCATTCCGATTGAACTGATTGAAGAGATAAAAAGGGAGATCGAGAAGAAGAAATCAGAGGCTGAGAAATCGAAGAAGAAGAAGAAGATCGGGGAATCGGAGATTTTGAACAAGAAATGATGAAGTGCGAGCTGTGTGGGCAGCTAGCGAGGACTTTCTGTGAGTCCGATCGGGCGAACCTATGTTGGGACTGCGATGAGAAGGTTCACTGTGCTAATTTTCTCGTTGCTAAGCATTCTAGGAGTCTTCTATGTCGTGCGTGTCAGTCGCCGACTCCATGGACGGCATCTGGTCGGAAGCTTACGCCTACGGTTTCTGTGTGTGAGGGATGTGTTGAAGTCCATGGTGGTAAATGCGAGCAAGGTGGATATCAAGAGCGCCGTAGAGATAACGAGGAGGAAGTTAATGATGGGGATGATTTTGACGATGGTGAAGGTTTCGGGAGTTATGAGGGAGGTGATAGTGAGGATGATGATGAGGATGACGATGAGGAGGAGGCGGTGGAGGAAGAAGAAGAGGATGAAGACGGAGAAAACCAGGTGGTTCCGTGGTCTTGTGCGTCTTCTTCGACGCCACCACCACCACCGACAGTGACTTCTAGCAGCGAGGGCGAGATGTCAGCTTGCGCTGGTGGCGTATCGAAGCGGAGGAAAGAGTACGACGTCGATCTCGATTCCGAGGTATGTATTTATGGATTTTTCTTCTTTTGCTGCTTTCTTTTCTTTTATGTTCTTACTTTCCTTGTCTGTGCGGAAGGAAAACGTTGTGGATTTGGAATTCCTTTGTCCGTTCATTTTCTTGTCTAGAATCGGTTTTTTGAAAATATGATAGCGATTTCGGTTCTCTTAGTGAGTGAAGACTCAAGATTAGGGCCGAATCTCTCTATTTCATGAACGATACGAATTTCATCCTTCAGAACCTATGATTTTGCACATAATCATTTTTGATATCCCGATCTGAAACATCATCAACATTCTCTGAGTTTTTAATTTCCCAGTGATCCAAACAGAATTTTAATAATCGTTTGCCGTTTGAATGCAGGACGAATTCGAGTGTTCTTCTGCTCAACAAGGAACCAGGCCTTCTTACAATGACGAAGCGACTTCCTCTACTTCCCACAGGCCACTGAAGCAAGCAAGAGTTACAGGACCGACCCAATCAGCCAGCATCATCCCCGATGATGAAGCTCGTAAAGCAGATTTAAAATCCACGGCTGTCATTAGATCGATCCAGAGTCTCCAGAATCGTCTGCCCACCGGTATCAACGATGCTTCCAAACTGATTTTTGGGATATGCAAAATGAGCAGAGATCAGAATCGTTGA

mRNA sequence

GTTCCCCTAATGTAAGGAGCTTGTACTTTCCCCTTCCTCTCCATTTATTCTTGGCCATTTCATTTCATTCCGATTGAACTGATTGAAGAGATAAAAAGGGAGATCGAGAAGAAGAAATCAGAGGCTGAGAAATCGAAGAAGAAGAAGAAGATCGGGGAATCGGAGATTTTGAACAAGAAATGATGAAGTGCGAGCTGTGTGGGCAGCTAGCGAGGACTTTCTGTGAGTCCGATCGGGCGAACCTATGTTGGGACTGCGATGAGAAGGTTCACTGTGCTAATTTTCTCGTTGCTAAGCATTCTAGGAGTCTTCTATGTCGTGCGTGTCAGTCGCCGACTCCATGGACGGCATCTGGTCGGAAGCTTACGCCTACGGTTTCTGTGTGTGAGGGATGTGTTGAAGTCCATGGTGGTAAATGCGAGCAAGGTGGATATCAAGAGCGCCGTAGAGATAACGAGGAGGAAGTTAATGATGGGGATGATTTTGACGATGGTGAAGGTTTCGGGAGTTATGAGGGAGGTGATAGTGAGGATGATGATGAGGATGACGATGAGGAGGAGGCGGTGGAGGAAGAAGAAGAGGATGAAGACGGAGAAAACCAGGTGGTTCCGTGGTCTTGTGCGTCTTCTTCGACGCCACCACCACCACCGACAGTGACTTCTAGCAGCGAGGGCGAGATGTCAGCTTGCGCTGGTGGCGTATCGAAGCGGAGGAAAGAGTACGACGTCGATCTCGATTCCGAGGACGAATTCGAGTGTTCTTCTGCTCAACAAGGAACCAGGCCTTCTTACAATGACGAAGCGACTTCCTCTACTTCCCACAGGCCACTGAAGCAAGCAAGAGTTACAGGACCGACCCAATCAGCCAGCATCATCCCCGATGATGAAGCTCGTAAAGCAGATTTAAAATCCACGGCTGTCATTAGATCGATCCAGAGTCTCCAGAATCGTCTGCCCACCGGTATCAACGATGCTTCCAAACTGATTTTTGGGATATGCAAAATGAGCAGAGATCAGAATCGTTGA

Coding sequence (CDS)

ATGATGAAGTGCGAGCTGTGTGGGCAGCTAGCGAGGACTTTCTGTGAGTCCGATCGGGCGAACCTATGTTGGGACTGCGATGAGAAGGTTCACTGTGCTAATTTTCTCGTTGCTAAGCATTCTAGGAGTCTTCTATGTCGTGCGTGTCAGTCGCCGACTCCATGGACGGCATCTGGTCGGAAGCTTACGCCTACGGTTTCTGTGTGTGAGGGATGTGTTGAAGTCCATGGTGGTAAATGCGAGCAAGGTGGATATCAAGAGCGCCGTAGAGATAACGAGGAGGAAGTTAATGATGGGGATGATTTTGACGATGGTGAAGGTTTCGGGAGTTATGAGGGAGGTGATAGTGAGGATGATGATGAGGATGACGATGAGGAGGAGGCGGTGGAGGAAGAAGAAGAGGATGAAGACGGAGAAAACCAGGTGGTTCCGTGGTCTTGTGCGTCTTCTTCGACGCCACCACCACCACCGACAGTGACTTCTAGCAGCGAGGGCGAGATGTCAGCTTGCGCTGGTGGCGTATCGAAGCGGAGGAAAGAGTACGACGTCGATCTCGATTCCGAGGACGAATTCGAGTGTTCTTCTGCTCAACAAGGAACCAGGCCTTCTTACAATGACGAAGCGACTTCCTCTACTTCCCACAGGCCACTGAAGCAAGCAAGAGTTACAGGACCGACCCAATCAGCCAGCATCATCCCCGATGATGAAGCTCGTAAAGCAGATTTAAAATCCACGGCTGTCATTAGATCGATCCAGAGTCTCCAGAATCGTCTGCCCACCGGTATCAACGATGCTTCCAAACTGATTTTTGGGATATGCAAAATGAGCAGAGATCAGAATCGTTGA

Protein sequence

MMKCELCGQLARTFCESDRANLCWDCDEKVHCANFLVAKHSRSLLCRACQSPTPWTASGRKLTPTVSVCEGCVEVHGGKCEQGGYQERRRDNEEEVNDGDDFDDGEGFGSYEGGDSEDDDEDDDEEEAVEEEEEDEDGENQVVPWSCASSSTPPPPPTVTSSSEGEMSACAGGVSKRRKEYDVDLDSEDEFECSSAQQGTRPSYNDEATSSTSHRPLKQARVTGPTQSASIIPDDEARKADLKSTAVIRSIQSLQNRLPTGINDASKLIFGICKMSRDQNR

Homology

[Close]

BLAST of CmaCh01G011720 vs. ExPASy Swiss-Prot
Match: O23379 (Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis thaliana OX=3702 GN=COL11 PE=1 SV=2)

HSP 1 Score: 61.2 bits (147), Expect = 2.1e-08
Identity = 31/72 (43.06%), Postives = 43/72 (59.72%), Query Frame = 0


Query: 3  KCELCG-QLARTFCESDRANLCWDCDEKVHCANFLVAKHSRSLLCRACQ-SPTPWTASGR 62
          +C+ CG + A  +C+SD A LC +CD  VH AN L  +H+RSLLC  C   PT    +  
Sbjct: 4  RCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCSLQPT----AVH 63

Query: 63 KLTPTVSVCEGC 73
           +   VS+C+GC
Sbjct: 64 CMNENVSLCQGC 71

[Close]

BLAST of CmaCh01G011720 vs. ExPASy Swiss-Prot
Match: Q1G3I2 (B-box domain protein 30 OS=Arabidopsis thaliana OX=3702 GN=MIP1A PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.8e-08
Identity = 25/52 (48.08%), Postives = 33/52 (63.46%), Query Frame = 0


Query: 2  MKCELCGQLARTFCESDRANLCWDCDEKVHCANFLVAKHSRSLLCRACQSPT 54
          + CELCG+ A  +CE+D A LC  CD  VH ANFL  +H R ++C  C+  T
Sbjct: 30 VSCELCGENATVYCEADAAFLCRKCDRWVHSANFLARRHLRRVICTTCRKLT 81

[Close]

BLAST of CmaCh01G011720 vs. ExPASy Swiss-Prot
Match: Q9LJB7 (B-box zinc finger protein 32 OS=Arabidopsis thaliana OX=3702 GN=BBX32 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.7e-08
Identity = 33/78 (42.31%), Postives = 40/78 (51.28%), Query Frame = 0


Query: 4  CELCGQLARTFCESDRANLCWDCDEKVHCANFLVAKHSRSLLCRACQSPTPWTASGRKLT 63
          CELCG  A   C +D A LC  CD K H +NFL A+H R ++C  C+S T    SG  L 
Sbjct: 5  CELCGAEADLHCAADSAFLCRSCDAKFHASNFLFARHFRRVICPNCKSLTQNFVSGPLLP 64

Query: 64 -PTVSVCEGCVEVHGGKC 81
           P  + C  C E     C
Sbjct: 65 WPPRTTC--CSESSSSSC 80

[Close]

BLAST of CmaCh01G011720 vs. ExPASy Swiss-Prot
Match: O22800 (Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana OX=3702 GN=COL14 PE=1 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 4.7e-08
Identity = 35/90 (38.89%), Postives = 45/90 (50.00%), Query Frame = 0


Query: 1  MMKCELCGQ-LARTFCESDRANLCWDCDEKVHCANFLVAKHSRSLLCRACQSPTPWTASG 60
          ++ CE CG+  A  FC +D A LC  CD+ VH AN L  KH RS +C  C        S 
Sbjct: 9  VVACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKE---PVSV 68

Query: 61 RKLTPTVSVCEGC-VEVHGGKCEQGGYQER 89
          R  T  + +C+ C  +VH G C      ER
Sbjct: 69 RCFTDNLVLCQECDWDVH-GSCSSSATHER 94

[Close]

BLAST of CmaCh01G011720 vs. ExPASy Swiss-Prot
Match: Q9LUA9 (Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana OX=3702 GN=COL10 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 6.2e-08
Identity = 30/70 (42.86%), Postives = 39/70 (55.71%), Query Frame = 0


Query: 4  CELCG-QLARTFCESDRANLCWDCDEKVHCANFLVAKHSRSLLCRACQSPTPWTASGRKL 63
          C+ CG Q +  +C SD A LC  CD  VH AN L  +HSR+L+C  C +     AS R  
Sbjct: 5  CDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQ---PASVRCS 64

Query: 64 TPTVSVCEGC 73
             VS+C+ C
Sbjct: 65 DERVSLCQNC 71

[Close]

BLAST of CmaCh01G011720 vs. ExPASy TrEMBL
Match: A0A6J1J288 (histone H3.v1-like OS=Cucurbita maxima OX=3661 GN=LOC111480652 PE=4 SV=1)

HSP 1 Score: 549.7 bits (1415), Expect = 7.2e-153
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0


Query: 1   MMKCELCGQLARTFCESDRANLCWDCDEKVHCANFLVAKHSRSLLCRACQSPTPWTASGR 60
           MMKCELCGQLARTFCESDRANLCWDCDEKVHCANFLVAKHSRSLLCRACQSPTPWTASGR
Sbjct: 1   MMKCELCGQLARTFCESDRANLCWDCDEKVHCANFLVAKHSRSLLCRACQSPTPWTASGR 60

Query: 61  KLTPTVSVCEGCVEVHGGKCEQGGYQERRRDNEEEVNDGDDFDDGEGFGSYEGGDSEDDD 120
           KLTPTVSVCEGCVEVHGGKCEQGGYQERRRDNEEEVNDGDDFDDGEGFGSYEGGDSEDDD
Sbjct: 61  KLTPTVSVCEGCVEVHGGKCEQGGYQERRRDNEEEVNDGDDFDDGEGFGSYEGGDSEDDD 120

Query: 121 EDDDEEEAVEEEEEDEDGENQVVPWSCASSSTPPPPPTVTSSSEGEMSACAGGVSKRRKE 180
           EDDDEEEAVEEEEEDEDGENQVVPWSCASSSTPPPPPTVTSSSEGEMSACAGGVSKRRKE
Sbjct: 121 EDDDEEEAVEEEEEDEDGENQVVPWSCASSSTPPPPPTVTSSSEGEMSACAGGVSKRRKE 180

Query: 181 YDVDLDSEDEFECSSAQQGTRPSYNDEATSSTSHRPLKQARVTGPTQSASIIPDDEARKA 240
           YDVDLDSEDEFECSSAQQGTRPSYNDEATSSTSHRPLKQARVTGPTQSASIIPDDEARKA
Sbjct: 181 YDVDLDSEDEFECSSAQQGTRPSYNDEATSSTSHRPLKQARVTGPTQSASIIPDDEARKA 240

Query: 241 DLKSTAVIRSIQSLQNRLPTGINDASKLIFGICKMSRDQNR 282
           DLKSTAVIRSIQSLQNRLPTGINDASKLIFGICKMSRDQNR
Sbjct: 241 DLKSTAVIRSIQSLQNRLPTGINDASKLIFGICKMSRDQNR 281

[Close]

BLAST of CmaCh01G011720 vs. ExPASy TrEMBL
Match: A0A6J1FKQ3 (histone H3.v1-like OS=Cucurbita moschata OX=3662 GN=LOC111446633 PE=4 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 6.8e-143
Identity = 269/282 (95.39%), Postives = 273/282 (96.81%), Query Frame = 0


Query: 1   MMKCELCGQLARTFCESDRANLCWDCDEKVHCANFLVAKHSRSLLCRACQSPTPWTASGR 60
           MMKCELCGQLARTFCESDRANLCWDCDEKVHCANFLVAKHSRSLLCRACQSPTPWTASGR
Sbjct: 1   MMKCELCGQLARTFCESDRANLCWDCDEKVHCANFLVAKHSRSLLCRACQSPTPWTASGR 60

Query: 61  KLTPTVSVCEGCVEVHGGKCEQGGYQERRRDNEEEVNDGDDFDDGEGFGSYEGGDSEDDD 120
           KLTPTVSVCEGCVEVH GK EQGG+QERRRDNE EVN GDDFDDGEGFGSYEGGDSED D
Sbjct: 61  KLTPTVSVCEGCVEVHCGKWEQGGFQERRRDNEVEVNGGDDFDDGEGFGSYEGGDSEDAD 120

Query: 121 EDDDEEEAVEEE-EEDEDGENQVVPWSCASSSTPPPPPTVTSSSEGEMSACAGGVSKRRK 180
           EDDDEEE  EEE EEDEDGENQVVPWSCASSSTPPPPPTVTSSSEGEMSACAGGVSKRR+
Sbjct: 121 EDDDEEEEEEEEAEEDEDGENQVVPWSCASSSTPPPPPTVTSSSEGEMSACAGGVSKRRR 180

Query: 181 EYDVDLDSEDEFECSSAQQGTRPSYNDEATSSTSHRPLKQARVTGPTQSASIIPDDEARK 240
           EYDVDLDS+DEFECSSAQQGTRPSYNDEATSSTSHRP KQARVTGPTQSASIIPDDEARK
Sbjct: 181 EYDVDLDSDDEFECSSAQQGTRPSYNDEATSSTSHRPPKQARVTGPTQSASIIPDDEARK 240

Query: 241 ADLKSTAVIRSIQSLQNRLPTGINDASKLIFGICKMSRDQNR 282
           ADLKSTAVIRSIQSLQNRLPTGINDASKLIFGICK+SRDQNR
Sbjct: 241 ADLKSTAVIRSIQSLQNRLPTGINDASKLIFGICKISRDQNR 282

[Close]

BLAST of CmaCh01G011720 vs. ExPASy TrEMBL
Match: A0A6J1F7H6 (protein BFR2 OS=Cucurbita moschata OX=3662 GN=LOC111443061 PE=4 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 5.1e-122
Identity = 234/283 (82.69%), Postives = 253/283 (89.40%), Query Frame = 0


Query: 1   MMKCELCGQLARTFCESDRANLCWDCDEKVHCANFLVAKHSRSLLCRACQSPTPWTASGR 60
           M KCELCGQ AR FCESD+ANLCWDCDE VHCANFLVAKHSRSLLC ACQSPTPW ASGR
Sbjct: 1   MKKCELCGQQARMFCESDQANLCWDCDENVHCANFLVAKHSRSLLCHACQSPTPWAASGR 60

Query: 61  KLTPTVSVCEGCVEVHGGKCEQGGYQERRRDNEEEVNDGDDFDDGEGFGSYEGGDS-EDD 120
           KLTPTVSVCEGCVEVHGGKCE+G Y ERRRDNEEEV+DGDDFDDGEGF SYEGGDS ED+
Sbjct: 61  KLTPTVSVCEGCVEVHGGKCEEGRYLERRRDNEEEVDDGDDFDDGEGFESYEGGDSEEDE 120

Query: 121 DEDDDEEEAVEEEEEDEDGENQVVPWSCASSSTPPPPPTVTSSSEGEMSACAGGVSKRRK 180
           D+DDDEEE  EEEE+DEDGENQVVPWSCASSS+PPPPPTVTSSSEGE+S  AG  SKR +
Sbjct: 121 DDDDDEEEEEEEEEDDEDGENQVVPWSCASSSSPPPPPTVTSSSEGEISTGAGVTSKRMR 180

Query: 181 EYDVDLDSEDEFECSSAQQGTRPSYNDEATSSTSHRPLKQARVTGPTQSAS-IIPDDEAR 240
           E DVDL+S+D+ ECSSA+QGTRP +N+EATSS+SHRPLKQARVTGPTQS S    DDEA 
Sbjct: 181 ECDVDLESDDDIECSSARQGTRPFFNEEATSSSSHRPLKQARVTGPTQSPSTTTADDEAY 240

Query: 241 KADLKSTAVIRSIQSLQNRLPTGINDASKLIFGICKMSRDQNR 282
           KADLKS +V+RSIQ LQNR PT INDASK+IFGICKMSRDQNR
Sbjct: 241 KADLKSISVVRSIQKLQNRPPTDINDASKMIFGICKMSRDQNR 283

[Close]

BLAST of CmaCh01G011720 vs. ExPASy TrEMBL
Match: A0A6J1CD44 (protein BFR2 OS=Momordica charantia OX=3673 GN=LOC111010576 PE=4 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 1.5e-118
Identity = 229/282 (81.21%), Postives = 252/282 (89.36%), Query Frame = 0


Query: 1   MMKCELCGQLARTFCESDRANLCWDCDEKVHCANFLVAKHSRSLLCRACQSPTPWTASGR 60
           M KCELCGQ AR FCESD+ANLCWDCDEKVHCANFLVAKHSRSLLC  CQSPTPWTASGR
Sbjct: 1   MKKCELCGQQARMFCESDQANLCWDCDEKVHCANFLVAKHSRSLLCHVCQSPTPWTASGR 60

Query: 61  KLTPTVSVCEGCVEVHGGKCEQGGYQERRRDNEEEVNDGDDFDDGEGFGSYEGGDSEDDD 120
           KLTPTVSVCEGCVEVHGGKCEQG YQERRRDNE+ V+DGDD +DGEGF SYEGGDSE+DD
Sbjct: 61  KLTPTVSVCEGCVEVHGGKCEQGAYQERRRDNEDVVDDGDDLEDGEGFESYEGGDSEEDD 120

Query: 121 EDDDEEEAVE-EEEEDEDGENQVVPWSCASSSTPPPPPTVTSSSEGEMSACAGGVSKRRK 180
           E+++EEE  E EEEEDEDGENQVVPWS AS S+PPPPPTVTSSSEGE+SA AG  SKR +
Sbjct: 121 EEEEEEEEEEGEEEEDEDGENQVVPWSYASYSSPPPPPTVTSSSEGEVSAGAGVTSKRMR 180

Query: 181 EYDVDLDSEDEFECSSAQQGTRPSYNDEATSSTSHRPLKQARVTGPTQSASIIPDDEARK 240
           +Y VDLDS+DE E SSA+QGTRP +NDEATSS+S RPLKQARVTG +QSAS IPDD A K
Sbjct: 181 DYGVDLDSDDEIESSSARQGTRPFFNDEATSSSSLRPLKQARVTGRSQSASTIPDDAACK 240

Query: 241 ADLKSTAVIRSIQSLQNRLPTGINDASKLIFGICKMSRDQNR 282
            +L+STAV+RSIQ LQ+RLP+ INDASK+IFGICKMSRDQNR
Sbjct: 241 PELESTAVVRSIQRLQSRLPSDINDASKVIFGICKMSRDQNR 282

[Close]

BLAST of CmaCh01G011720 vs. ExPASy TrEMBL
Match: A0A6J1IMI6 (protein BFR2 OS=Cucurbita maxima OX=3661 GN=LOC111476916 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 7.6e-118
Identity = 226/281 (80.43%), Postives = 249/281 (88.61%), Query Frame = 0


Query: 1   MMKCELCGQLARTFCESDRANLCWDCDEKVHCANFLVAKHSRSLLCRACQSPTPWTASGR 60
           M KCELCGQ AR FCESD+ANLCWDCDE VHCANFLVAKHSRSLLC ACQSPTPW ASGR
Sbjct: 1   MKKCELCGQQARMFCESDQANLCWDCDENVHCANFLVAKHSRSLLCHACQSPTPWAASGR 60

Query: 61  KLTPTVSVCEGCVEVHGGKCEQGGYQERRRDNEEEVNDGDDFDDGEGFGSYEGGDSEDDD 120
           KLTPTVSVCEGCVEVH GKC +G Y ERRRDNEEEV+DGDDFDDGEGF SYEGGDSE+D+
Sbjct: 61  KLTPTVSVCEGCVEVHRGKCGEGRYIERRRDNEEEVDDGDDFDDGEGFESYEGGDSEEDE 120

Query: 121 EDDDEEEAVEEEEEDEDGENQVVPWSCASSSTPPPPPTVTSSSEGEMSACAGGVSKRRKE 180
            DD+ EE  E+EE+DEDGENQVVPWSCASSS+PPPPPTVTSSSEGE+S  AG  SKR ++
Sbjct: 121 YDDELEE--EDEEDDEDGENQVVPWSCASSSSPPPPPTVTSSSEGEISTGAGVTSKRMRK 180

Query: 181 YDVDLDSEDEFECSSAQQGTRPSYNDEATSSTSHRPLKQARVTGPTQSASIIPDDEARKA 240
            DVDL+S+D  ECSSA+Q TRP +N+EATSS+S+RPLKQ+RVTGPTQS S  PDDEA KA
Sbjct: 181 CDVDLESDDGIECSSARQSTRPFFNEEATSSSSYRPLKQSRVTGPTQSPSTTPDDEAYKA 240

Query: 241 DLKSTAVIRSIQSLQNRLPTGINDASKLIFGICKMSRDQNR 282
           DLKST+V+RSIQ LQNR PT INDASK+IFGICKMSRDQNR
Sbjct: 241 DLKSTSVVRSIQKLQNRPPTDINDASKMIFGICKMSRDQNR 279

[Close]

BLAST of CmaCh01G011720 vs. NCBI nr
Match: XP_022981574.1 (histone H3.v1-like [Cucurbita maxima])

HSP 1 Score: 549.7 bits (1415), Expect = 1.5e-152
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0


Query: 1   MMKCELCGQLARTFCESDRANLCWDCDEKVHCANFLVAKHSRSLLCRACQSPTPWTASGR 60
           MMKCELCGQLARTFCESDRANLCWDCDEKVHCANFLVAKHSRSLLCRACQSPTPWTASGR
Sbjct: 1   MMKCELCGQLARTFCESDRANLCWDCDEKVHCANFLVAKHSRSLLCRACQSPTPWTASGR 60

Query: 61  KLTPTVSVCEGCVEVHGGKCEQGGYQERRRDNEEEVNDGDDFDDGEGFGSYEGGDSEDDD 120
           KLTPTVSVCEGCVEVHGGKCEQGGYQERRRDNEEEVNDGDDFDDGEGFGSYEGGDSEDDD
Sbjct: 61  KLTPTVSVCEGCVEVHGGKCEQGGYQERRRDNEEEVNDGDDFDDGEGFGSYEGGDSEDDD 120

Query: 121 EDDDEEEAVEEEEEDEDGENQVVPWSCASSSTPPPPPTVTSSSEGEMSACAGGVSKRRKE 180
           EDDDEEEAVEEEEEDEDGENQVVPWSCASSSTPPPPPTVTSSSEGEMSACAGGVSKRRKE
Sbjct: 121 EDDDEEEAVEEEEEDEDGENQVVPWSCASSSTPPPPPTVTSSSEGEMSACAGGVSKRRKE 180

Query: 181 YDVDLDSEDEFECSSAQQGTRPSYNDEATSSTSHRPLKQARVTGPTQSASIIPDDEARKA 240
           YDVDLDSEDEFECSSAQQGTRPSYNDEATSSTSHRPLKQARVTGPTQSASIIPDDEARKA
Sbjct: 181 YDVDLDSEDEFECSSAQQGTRPSYNDEATSSTSHRPLKQARVTGPTQSASIIPDDEARKA 240

Query: 241 DLKSTAVIRSIQSLQNRLPTGINDASKLIFGICKMSRDQNR 282
           DLKSTAVIRSIQSLQNRLPTGINDASKLIFGICKMSRDQNR
Sbjct: 241 DLKSTAVIRSIQSLQNRLPTGINDASKLIFGICKMSRDQNR 281

[Close]

BLAST of CmaCh01G011720 vs. NCBI nr
Match: KAG6607840.1 (B-box domain protein 31, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015238.1 B-box domain protein 31, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 522.3 bits (1344), Expect = 2.6e-144
Identity = 270/282 (95.74%), Postives = 274/282 (97.16%), Query Frame = 0


Query: 1   MMKCELCGQLARTFCESDRANLCWDCDEKVHCANFLVAKHSRSLLCRACQSPTPWTASGR 60
           MMKCELCGQLARTFCESDRANLCWDCDEKVHCANFLVAKHSRSLLCRACQSPTPWTASGR
Sbjct: 1   MMKCELCGQLARTFCESDRANLCWDCDEKVHCANFLVAKHSRSLLCRACQSPTPWTASGR 60

Query: 61  KLTPTVSVCEGCVEVHGGKCEQGGYQERRRDNEEEVNDGDDFDDGEGFGSYEGGDSEDDD 120
           KLTPTVSVCEGCVEVHGGKCEQGG+QERRRDNEE+VN GDDFDDGEGFGSYEGGDSED D
Sbjct: 61  KLTPTVSVCEGCVEVHGGKCEQGGFQERRRDNEEKVNGGDDFDDGEGFGSYEGGDSEDAD 120

Query: 121 EDDD-EEEAVEEEEEDEDGENQVVPWSCASSSTPPPPPTVTSSSEGEMSACAGGVSKRRK 180
           EDDD EEE  EEEEEDEDGENQVVPWSCASSSTPPPPPTVTSSSEGEMSACAGGVSKRR+
Sbjct: 121 EDDDEEEEEEEEEEEDEDGENQVVPWSCASSSTPPPPPTVTSSSEGEMSACAGGVSKRRR 180

Query: 181 EYDVDLDSEDEFECSSAQQGTRPSYNDEATSSTSHRPLKQARVTGPTQSASIIPDDEARK 240
           EYDVDLDS+DEFECSSAQQ TRPSYNDEATSSTSHRP KQARVTGPTQSASIIPDDEARK
Sbjct: 181 EYDVDLDSDDEFECSSAQQRTRPSYNDEATSSTSHRPPKQARVTGPTQSASIIPDDEARK 240

Query: 241 ADLKSTAVIRSIQSLQNRLPTGINDASKLIFGICKMSRDQNR 282
           ADLKST VIRSIQSLQNRLPTGINDASKLIFGICKMSRDQNR
Sbjct: 241 ADLKSTTVIRSIQSLQNRLPTGINDASKLIFGICKMSRDQNR 282

[Close]

BLAST of CmaCh01G011720 vs. NCBI nr
Match: XP_022941291.1 (histone H3.v1-like [Cucurbita moschata])

HSP 1 Score: 516.5 bits (1329), Expect = 1.4e-142
Identity = 269/282 (95.39%), Postives = 273/282 (96.81%), Query Frame = 0


Query: 1   MMKCELCGQLARTFCESDRANLCWDCDEKVHCANFLVAKHSRSLLCRACQSPTPWTASGR 60
           MMKCELCGQLARTFCESDRANLCWDCDEKVHCANFLVAKHSRSLLCRACQSPTPWTASGR
Sbjct: 1   MMKCELCGQLARTFCESDRANLCWDCDEKVHCANFLVAKHSRSLLCRACQSPTPWTASGR 60

Query: 61  KLTPTVSVCEGCVEVHGGKCEQGGYQERRRDNEEEVNDGDDFDDGEGFGSYEGGDSEDDD 120
           KLTPTVSVCEGCVEVH GK EQGG+QERRRDNE EVN GDDFDDGEGFGSYEGGDSED D
Sbjct: 61  KLTPTVSVCEGCVEVHCGKWEQGGFQERRRDNEVEVNGGDDFDDGEGFGSYEGGDSEDAD 120

Query: 121 EDDDEEEAVEEE-EEDEDGENQVVPWSCASSSTPPPPPTVTSSSEGEMSACAGGVSKRRK 180
           EDDDEEE  EEE EEDEDGENQVVPWSCASSSTPPPPPTVTSSSEGEMSACAGGVSKRR+
Sbjct: 121 EDDDEEEEEEEEAEEDEDGENQVVPWSCASSSTPPPPPTVTSSSEGEMSACAGGVSKRRR 180

Query: 181 EYDVDLDSEDEFECSSAQQGTRPSYNDEATSSTSHRPLKQARVTGPTQSASIIPDDEARK 240
           EYDVDLDS+DEFECSSAQQGTRPSYNDEATSSTSHRP KQARVTGPTQSASIIPDDEARK
Sbjct: 181 EYDVDLDSDDEFECSSAQQGTRPSYNDEATSSTSHRPPKQARVTGPTQSASIIPDDEARK 240

Query: 241 ADLKSTAVIRSIQSLQNRLPTGINDASKLIFGICKMSRDQNR 282
           ADLKSTAVIRSIQSLQNRLPTGINDASKLIFGICK+SRDQNR
Sbjct: 241 ADLKSTAVIRSIQSLQNRLPTGINDASKLIFGICKISRDQNR 282

[Close]

BLAST of CmaCh01G011720 vs. NCBI nr
Match: XP_022936446.1 (protein BFR2 [Cucurbita moschata])

HSP 1 Score: 447.2 bits (1149), Expect = 1.0e-121
Identity = 234/283 (82.69%), Postives = 253/283 (89.40%), Query Frame = 0


Query: 1   MMKCELCGQLARTFCESDRANLCWDCDEKVHCANFLVAKHSRSLLCRACQSPTPWTASGR 60
           M KCELCGQ AR FCESD+ANLCWDCDE VHCANFLVAKHSRSLLC ACQSPTPW ASGR
Sbjct: 1   MKKCELCGQQARMFCESDQANLCWDCDENVHCANFLVAKHSRSLLCHACQSPTPWAASGR 60

Query: 61  KLTPTVSVCEGCVEVHGGKCEQGGYQERRRDNEEEVNDGDDFDDGEGFGSYEGGDS-EDD 120
           KLTPTVSVCEGCVEVHGGKCE+G Y ERRRDNEEEV+DGDDFDDGEGF SYEGGDS ED+
Sbjct: 61  KLTPTVSVCEGCVEVHGGKCEEGRYLERRRDNEEEVDDGDDFDDGEGFESYEGGDSEEDE 120

Query: 121 DEDDDEEEAVEEEEEDEDGENQVVPWSCASSSTPPPPPTVTSSSEGEMSACAGGVSKRRK 180
           D+DDDEEE  EEEE+DEDGENQVVPWSCASSS+PPPPPTVTSSSEGE+S  AG  SKR +
Sbjct: 121 DDDDDEEEEEEEEEDDEDGENQVVPWSCASSSSPPPPPTVTSSSEGEISTGAGVTSKRMR 180

Query: 181 EYDVDLDSEDEFECSSAQQGTRPSYNDEATSSTSHRPLKQARVTGPTQSAS-IIPDDEAR 240
           E DVDL+S+D+ ECSSA+QGTRP +N+EATSS+SHRPLKQARVTGPTQS S    DDEA 
Sbjct: 181 ECDVDLESDDDIECSSARQGTRPFFNEEATSSSSHRPLKQARVTGPTQSPSTTTADDEAY 240

Query: 241 KADLKSTAVIRSIQSLQNRLPTGINDASKLIFGICKMSRDQNR 282
           KADLKS +V+RSIQ LQNR PT INDASK+IFGICKMSRDQNR
Sbjct: 241 KADLKSISVVRSIQKLQNRPPTDINDASKMIFGICKMSRDQNR 283

[Close]

BLAST of CmaCh01G011720 vs. NCBI nr
Match: XP_023535120.1 (protein BFR2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 446.8 bits (1148), Expect = 1.4e-121
Identity = 232/282 (82.27%), Postives = 253/282 (89.72%), Query Frame = 0


Query: 1   MMKCELCGQLARTFCESDRANLCWDCDEKVHCANFLVAKHSRSLLCRACQSPTPWTASGR 60
           M KCELCGQ AR FCESD+ANLCWDCDE VHCANFLVAKHSRSLLC ACQSPTPW ASGR
Sbjct: 1   MKKCELCGQQARMFCESDQANLCWDCDENVHCANFLVAKHSRSLLCHACQSPTPWAASGR 60

Query: 61  KLTPTVSVCEGCVEVHGGKCEQGGYQERRRDNEEEVNDGDDFDDGEGFGSYEGGDSEDDD 120
           KLTPTVSVCEGCVEVHGGKCE+G Y ERRRDNEEEV+DGDDFDDGEGFGSYEGGDSE+DD
Sbjct: 61  KLTPTVSVCEGCVEVHGGKCEEGRYLERRRDNEEEVDDGDDFDDGEGFGSYEGGDSEEDD 120

Query: 121 EDDDEEEAVEEEEEDEDGENQVVPWSCASSSTPPPPPTVTSSSEGEMSACAGGVSKRRKE 180
           +DD+EE   EE+E+DEDGENQVVPWSCASSS+PPPPPTVTSSSEGE+S  AG  SKR +E
Sbjct: 121 DDDEEE---EEDEDDEDGENQVVPWSCASSSSPPPPPTVTSSSEGEISTGAGVTSKRMRE 180

Query: 181 YDVDLDSEDEFECSSAQQGTRPSYNDEATSSTSHRPLKQARVTGPTQSAS-IIPDDEARK 240
            DVDL+S+D+ ECSSA+Q TRP +N+EATSS+SHRPLKQARVTGPTQS S   PDDEA K
Sbjct: 181 CDVDLESDDDIECSSARQSTRPFFNEEATSSSSHRPLKQARVTGPTQSPSTTTPDDEAYK 240

Query: 241 ADLKSTAVIRSIQSLQNRLPTGINDASKLIFGICKMSRDQNR 282
           ADLKS +V+RSIQ LQNR PT INDASK+IFGICKMSRDQNR
Sbjct: 241 ADLKSISVVRSIQKLQNRPPTDINDASKMIFGICKMSRDQNR 279

[Close]

BLAST of CmaCh01G011720 vs. TAIR 10
Match: AT4G27310.1 (B-box type zinc finger family protein )

HSP 1 Score: 144.4 bits (363), Expect = 1.3e-34
Identity = 107/231 (46.32%), Postives = 138/231 (59.74%), Query Frame = 0


Query: 3   KCELCGQLARTFCESDRANLCWDCDEKVHCANFLVAKHSRSLLCRACQSPTPWTASGRKL 62
           KC+LC  +AR +CESD+A+LCWDCD KVH ANFLVAKH+R LLC ACQS TPW A+G +L
Sbjct: 4   KCDLCNGVARMYCESDQASLCWDCDGKVHGANFLVAKHTRCLLCSACQSLTPWKATGLRL 63

Query: 63  TPTVSVCEGCVEVH---GGK-----CEQGGYQERRRDNEEEVNDGDDFDDGEGFGSYEGG 122
            PT SVCE CV +    GG+      E  G +E      EE    +D  DG+   SY+  
Sbjct: 64  GPTFSVCESCVALKNAGGGRGNRVLSENRGQEEVNSFESEEDRIREDHGDGDDAESYDDD 123

Query: 123 DSEDDDED--DDEEEAVEEEEEDEDGENQVVPWSCASSSTPPPPPTVTSSSEGEMSACAG 182
           + ED+DE+  DDE+E  +E+ +DE+ ENQVVPWS A+     PP   +SSS+G      G
Sbjct: 124 EEEDEDEEYSDDEDEDDDEDGDDEEAENQVVPWSAAAQ---VPPVMSSSSSDG---GSGG 183

Query: 183 GVSKR---RKEYDVDLDSEDEFECSSAQQGTRPSYNDEATSSTSHRPLKQA 221
            V+KR   R+  D+ L S+DE   SSAQ             S   RPLK++
Sbjct: 184 SVTKRTRARENSDL-LCSDDEIGSSSAQ------------GSNYSRPLKRS 215

[Close]

BLAST of CmaCh01G011720 vs. TAIR 10
Match: AT5G54470.1 (B-box type zinc finger family protein )

HSP 1 Score: 122.9 bits (307), Expect = 4.2e-28
Identity = 83/188 (44.15%), Postives = 108/188 (57.45%), Query Frame = 0


Query: 3   KCELCGQLARTFCESDRANLCWDCDEKVHCANFLVAKHSRSLLCRACQSPTPWTASGRKL 62
           KCELC  +AR +CESD+A+LCWDCD KVH ANFLVAKH R LLC ACQS TPW ASG  L
Sbjct: 5   KCELCCGVARMYCESDQASLCWDCDGKVHGANFLVAKHMRCLLCSACQSHTPWKASGLNL 64

Query: 63  TPTVSVCEGCVEVHGGKCEQGGYQERRRDNEEEVNDGDDFDDGEGFGSYEGGDSEDDDED 122
            PTVS+CE C+            +++  + EEE+            G  +G +S D++ D
Sbjct: 65  GPTVSICESCLARKKNNNSSLAGRDQNLNQEEEI-----------IGCNDGAESYDEESD 124

Query: 123 DDEEEAVEEEEEDEDGENQVVPWSCASSSTPPPPPTVTSSSEGEMSACAGGVSKRRKEYD 182
           +DEEE        E+ ENQVVP     ++     P V+SSS   +S+  G    +R   D
Sbjct: 125 EDEEE--------EEVENQVVP-----AAVEQELPVVSSSS--SVSSGEGDQVVKRTRLD 166

Query: 183 VDLDSEDE 191
           +DL+  DE
Sbjct: 185 LDLNLSDE 166

[Close]

BLAST of CmaCh01G011720 vs. TAIR 10
Match: AT4G15250.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 61.2 bits (147), Expect = 1.5e-09
Identity = 31/72 (43.06%), Postives = 43/72 (59.72%), Query Frame = 0


Query: 3  KCELCG-QLARTFCESDRANLCWDCDEKVHCANFLVAKHSRSLLCRACQ-SPTPWTASGR 62
          +C+ CG + A  +C+SD A LC +CD  VH AN L  +H+RSLLC  C   PT    +  
Sbjct: 4  RCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCSLQPT----AVH 63

Query: 63 KLTPTVSVCEGC 73
           +   VS+C+GC
Sbjct: 64 CMNENVSLCQGC 71

[Close]

BLAST of CmaCh01G011720 vs. TAIR 10
Match: AT4G15248.1 (B-box type zinc finger family protein )

HSP 1 Score: 60.8 bits (146), Expect = 2.0e-09
Identity = 25/52 (48.08%), Postives = 33/52 (63.46%), Query Frame = 0


Query: 2  MKCELCGQLARTFCESDRANLCWDCDEKVHCANFLVAKHSRSLLCRACQSPT 54
          + CELCG+ A  +CE+D A LC  CD  VH ANFL  +H R ++C  C+  T
Sbjct: 30 VSCELCGENATVYCEADAAFLCRKCDRWVHSANFLARRHLRRVICTTCRKLT 81

[Close]

BLAST of CmaCh01G011720 vs. TAIR 10
Match: AT2G33500.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 60.1 bits (144), Expect = 3.3e-09
Identity = 35/90 (38.89%), Postives = 45/90 (50.00%), Query Frame = 0


Query: 1  MMKCELCGQ-LARTFCESDRANLCWDCDEKVHCANFLVAKHSRSLLCRACQSPTPWTASG 60
          ++ CE CG+  A  FC +D A LC  CD+ VH AN L  KH RS +C  C        S 
Sbjct: 9  VVACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKE---PVSV 68

Query: 61 RKLTPTVSVCEGC-VEVHGGKCEQGGYQER 89
          R  T  + +C+ C  +VH G C      ER
Sbjct: 69 RCFTDNLVLCQECDWDVH-GSCSSSATHER 94

The following BLAST results are available for this feature:

BLAST of CmaCh01G011720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23379	2.1e-08	43.06	Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q1G3I2	2.8e-08	48.08	B-box domain protein 30 OS=Arabidopsis thaliana OX=3702 GN=MIP1A PE=1 SV=1	[more]
Q9LJB7	4.7e-08	42.31	B-box zinc finger protein 32 OS=Arabidopsis thaliana OX=3702 GN=BBX32 PE=1 SV=1	[more]
O22800	4.7e-08	38.89	Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana OX=3702 GN=COL14 PE...	[more]
Q9LUA9	6.2e-08	42.86	Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana OX=3702 GN=COL10 PE...	[more]

BLAST of CmaCh01G011720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J288	7.2e-153	100.00	histone H3.v1-like OS=Cucurbita maxima OX=3661 GN=LOC111480652 PE=4 SV=1	[more]
A0A6J1FKQ3	6.8e-143	95.39	histone H3.v1-like OS=Cucurbita moschata OX=3662 GN=LOC111446633 PE=4 SV=1	[more]
A0A6J1F7H6	5.1e-122	82.69	protein BFR2 OS=Cucurbita moschata OX=3662 GN=LOC111443061 PE=4 SV=1	[more]
A0A6J1CD44	1.5e-118	81.21	protein BFR2 OS=Momordica charantia OX=3673 GN=LOC111010576 PE=4 SV=1	[more]
A0A6J1IMI6	7.6e-118	80.43	protein BFR2 OS=Cucurbita maxima OX=3661 GN=LOC111476916 PE=4 SV=1	[more]

BLAST of CmaCh01G011720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022981574.1	1.5e-152	100.00	histone H3.v1-like [Cucurbita maxima]	[more]
KAG6607840.1	2.6e-144	95.74	B-box domain protein 31, partial [Cucurbita argyrosperma subsp. sororia] >KAG701...	[more]
XP_022941291.1	1.4e-142	95.39	histone H3.v1-like [Cucurbita moschata]	[more]
XP_022936446.1	1.0e-121	82.69	protein BFR2 [Cucurbita moschata]	[more]
XP_023535120.1	1.4e-121	82.27	protein BFR2-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh01G011720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27310.1	1.3e-34	46.32	B-box type zinc finger family protein	[more]
AT5G54470.1	4.2e-28	44.15	B-box type zinc finger family protein	[more]
AT4G15250.1	1.5e-09	43.06	B-box type zinc finger protein with CCT domain	[more]
AT4G15248.1	2.0e-09	48.08	B-box type zinc finger family protein	[more]
AT2G33500.1	3.3e-09	38.89	B-box type zinc finger protein with CCT domain	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 1..45 e-value: 2.5E-8 score: 43.7
IPR000315	B-box-type zinc finger	PFAM	PF00643	zf-B_box	coord: 2..42 e-value: 3.1E-5 score: 24.0
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 1..45 score: 9.314086
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..230
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..234
None	No IPR available	PANTHER	PTHR31717:SF60	OS08G0178800 PROTEIN	coord: 1..230
None	No IPR available	PANTHER	PTHR31717	ZINC FINGER PROTEIN CONSTANS-LIKE 10	coord: 1..230
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 3..45 e-value: 4.21803E-12 score: 57.6927

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G011720.1	CmaCh01G011720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding