CmaCh01G011220 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh01G011220
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Glutathione transport system permease gsiD
Location	Cma_Chr01: 8239668 .. 8240330 (+)
RNA-Seq Expression	CmaCh01G011220
Synteny	CmaCh01G011220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTGGCAGAGTCTCTATCTTCCTCCGCCGGTGAAATCCGTTTTCTCGATGAATTGCATTACCTCCGCCATTGAGTTGCCTGTTCTCCGATCGCATTTCAAGCCAAATCGCCGGCAACGGAAGCAGAACAACTCACAATCTCAGCCACCGATTTACATTTCTCCACAAAGCAACCGATTCGCTTCACTAACAGCCAACGCAATTCCAAACTCTCTAGTTCTCGCAAACACTATTCCTCCGTCGCAGTCCGGCGACGTATCGGTCCTCCTCCAGACAAGGTGCGCTACTTTCTCGTTCTTTTAGATTCGAAAATCGAGCCAATCTGAGATTAATCTCCTCAATTTCTCCGTTCTTTTGGCAATCTGTGCAGCGGCGTGCTTCTGATCGTGTATTTGATAGCGAATTTCATTGTGCCGGAGTTCATTATGAAATCGTACAGTACCGATGAGAGCGAGGGGAAAGCATTGATGGAAGACGAAGAAATAGGCGCCAGTGAAAGGAGGAAGAAACAAGGTTTTGGCGGTAACAAGAGATAGCGAAAATTGAAGGTAAAGCCATTGAACTTTTTTCGTGTTCTGTACAGAAATTGCAATTTTCTTTGCTTTTTTTCGGTGCTTTTGTGTGGTGAAGGTGAATTCAGGATTGTGTTGCTTAGAATAG

mRNA sequence

ATGGCTTGGCAGAGTCTCTATCTTCCTCCGCCGGTGAAATCCGTTTTCTCGATGAATTGCATTACCTCCGCCATTGAGTTGCCTGTTCTCCGATCGCATTTCAAGCCAAATCGCCGGCAACGGAAGCAGAACAACTCACAATCTCAGCCACCGATTTACATTTCTCCACAAAGCAACCGATTCGCTTCACTAACAGCCAACGCAATTCCAAACTCTCTAGTTCTCGCAAACACTATTCCTCCGTCGCAGTCCGGCGACGTATCGGTCCTCCTCCAGACAAGCGGCGTGCTTCTGATCGTGTATTTGATAGCGAATTTCATTGTGCCGGAGTTCATTATGAAATCGTACAGTACCGATGAGAGCGAGGGGAAAGCATTGATGGAAGACGAAGAAATAGGCGCCAGTGAAAGGAGGAAGAAACAAGAAATTGCAATTTTCTTTGCTTTTTTTCGGTGCTTTTGTGTGGTGAAGGTGAATTCAGGATTGTGTTGCTTAGAATAG

Coding sequence (CDS)

ATGGCTTGGCAGAGTCTCTATCTTCCTCCGCCGGTGAAATCCGTTTTCTCGATGAATTGCATTACCTCCGCCATTGAGTTGCCTGTTCTCCGATCGCATTTCAAGCCAAATCGCCGGCAACGGAAGCAGAACAACTCACAATCTCAGCCACCGATTTACATTTCTCCACAAAGCAACCGATTCGCTTCACTAACAGCCAACGCAATTCCAAACTCTCTAGTTCTCGCAAACACTATTCCTCCGTCGCAGTCCGGCGACGTATCGGTCCTCCTCCAGACAAGCGGCGTGCTTCTGATCGTGTATTTGATAGCGAATTTCATTGTGCCGGAGTTCATTATGAAATCGTACAGTACCGATGAGAGCGAGGGGAAAGCATTGATGGAAGACGAAGAAATAGGCGCCAGTGAAAGGAGGAAGAAACAAGAAATTGCAATTTTCTTTGCTTTTTTTCGGTGCTTTTGTGTGGTGAAGGTGAATTCAGGATTGTGTTGCTTAGAATAG

Protein sequence

MAWQSLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPPIYISPQSNRFASLTANAIPNSLVLANTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTDESEGKALMEDEEIGASERRKKQEIAIFFAFFRCFCVVKVNSGLCCLE

Homology

[Close]

BLAST of CmaCh01G011220 vs. ExPASy TrEMBL
Match: A0A6J1J030 (uncharacterized protein LOC111480699 OS=Cucurbita maxima OX=3661 GN=LOC111480699 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.9e-69
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MAWQSLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPPIYISPQSNR 60
           MAWQSLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPPIYISPQSNR
Sbjct: 10  MAWQSLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPPIYISPQSNR 69

Query: 61  FASLTANAIPNSLVLANTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTDE 120
           FASLTANAIPNSLVLANTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTDE
Sbjct: 70  FASLTANAIPNSLVLANTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTDE 129

Query: 121 SEGKALMEDEEIGASERRKKQ 142
           SEGKALMEDEEIGASERRKKQ
Sbjct: 130 SEGKALMEDEEIGASERRKKQ 150

[Close]

BLAST of CmaCh01G011220 vs. ExPASy TrEMBL
Match: A0A6J1FK57 (uncharacterized protein LOC111446047 OS=Cucurbita moschata OX=3662 GN=LOC111446047 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.2e-65
Identity = 138/142 (97.18%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MAWQSLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPPIYISPQSNR 60
           MAWQSLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQP IYISPQSNR
Sbjct: 1   MAWQSLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQSNR 60

Query: 61  FASLTANAIPNSLVLAN-TIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD 120
           FASLTANAIPNSLVLAN TIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD
Sbjct: 61  FASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD 120

Query: 121 ESEGKALMEDEEIGASERRKKQ 142
           ESEGKALMED+E GASERRKKQ
Sbjct: 121 ESEGKALMEDDEKGASERRKKQ 142

[Close]

BLAST of CmaCh01G011220 vs. ExPASy TrEMBL
Match: A0A5D3BI04 (Glutathione transport system permease gsiD OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27427G00010 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 2.6e-17
Identity = 69/112 (61.61%), Postives = 80/112 (71.43%), Query Frame = 0


Query: 18  MNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPPIYISPQSN-RFASLTANAI--PNSLV 77
           MN I S+IE  +L S   PN  Q  Q+N      I++SPQ+  RF S+  N+I   NSL+
Sbjct: 1   MNSIFSSIEFRLLPS---PNPPQ-PQHNLHIFHQIHLSPQTTYRFNSIKTNSILPTNSLI 60

Query: 78  LAN-TIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSY-STDESEGK 125
           L N TIPP+QSGD+SVLLQTSGVLLI YLIANFI PEFIMKSY S DESEGK
Sbjct: 61  LGNSTIPPAQSGDISVLLQTSGVLLIAYLIANFIFPEFIMKSYRSDDESEGK 108

[Close]

BLAST of CmaCh01G011220 vs. ExPASy TrEMBL
Match: A0A0A0K9M2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G420170 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.3e-16
Identity = 65/111 (58.56%), Postives = 80/111 (72.07%), Query Frame = 0


Query: 18  MNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPPIYISPQ-SNRFASLTANAI-PNSLVL 77
           MN I S+I+  +L S   PN RQ  Q+N      IY+ PQ ++RF+S+  N+I P SL+L
Sbjct: 1   MNSIFSSIQFRLLPS---PNPRQ-PQHNLHIFHQIYLPPQITHRFSSIKTNSILPTSLIL 60

Query: 78  AN-TIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSY-STDESEGK 125
            N TIPPSQSGD+SVLL  SGVLLI YL+ANFI PEFIMKSY S DE++GK
Sbjct: 61  GNSTIPPSQSGDISVLLPISGVLLIAYLLANFIFPEFIMKSYRSDDENDGK 107

[Close]

BLAST of CmaCh01G011220 vs. ExPASy TrEMBL
Match: B9SV97 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1303160 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.0e-09
Identity = 52/130 (40.00%), Postives = 67/130 (51.54%), Query Frame = 0


Query: 18  MNCITSAIEL-PVLRSHFKPNRRQRKQNNSQSQPPIYISPQSNRFASLTANAIPNSLVLA 77
           M CI     L P L SH K    Q+     +   P  +     R  S+  NA+PN L+LA
Sbjct: 1   MKCIVHFQSLFPSLHSHPK----QKLMKKHKWLNPCSLVKLDQRVLSVRTNAVPNPLILA 60

Query: 78  NTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTDES------EGKALMEDE 137
            +  P+Q GD+SVLL T G+LL VY IANF+VP FI KS+ +D+       E +    DE
Sbjct: 61  ESTSPAQGGDISVLLPTGGLLLFVYGIANFVVPFFISKSFESDKETEDSGPEYEGSFNDE 120

Query: 138 EIGASERRKK 141
              A  R KK
Sbjct: 121 ASKAKLRTKK 126

[Close]

BLAST of CmaCh01G011220 vs. NCBI nr
Match: XP_022981640.1 (uncharacterized protein LOC111480699 [Cucurbita maxima])

HSP 1 Score: 271.2 bits (692), Expect = 6.1e-69
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MAWQSLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPPIYISPQSNR 60
           MAWQSLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPPIYISPQSNR
Sbjct: 10  MAWQSLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPPIYISPQSNR 69

Query: 61  FASLTANAIPNSLVLANTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTDE 120
           FASLTANAIPNSLVLANTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTDE
Sbjct: 70  FASLTANAIPNSLVLANTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTDE 129

Query: 121 SEGKALMEDEEIGASERRKKQ 142
           SEGKALMEDEEIGASERRKKQ
Sbjct: 130 SEGKALMEDEEIGASERRKKQ 150

[Close]

BLAST of CmaCh01G011220 vs. NCBI nr
Match: XP_022940449.1 (uncharacterized protein LOC111446047 [Cucurbita moschata] >KAG7037370.1 hypothetical protein SDJN02_00995 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 259.2 bits (661), Expect = 2.4e-65
Identity = 138/142 (97.18%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MAWQSLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPPIYISPQSNR 60
           MAWQSLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQP IYISPQSNR
Sbjct: 1   MAWQSLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQSNR 60

Query: 61  FASLTANAIPNSLVLAN-TIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD 120
           FASLTANAIPNSLVLAN TIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD
Sbjct: 61  FASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD 120

Query: 121 ESEGKALMEDEEIGASERRKKQ 142
           ESEGKALMED+E GASERRKKQ
Sbjct: 121 ESEGKALMEDDEKGASERRKKQ 142

[Close]

BLAST of CmaCh01G011220 vs. NCBI nr
Match: KAG6607795.1 (hypothetical protein SDJN03_01137, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 259.2 bits (661), Expect = 2.4e-65
Identity = 138/142 (97.18%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MAWQSLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPPIYISPQSNR 60
           MAWQSLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQP IYISPQSNR
Sbjct: 1   MAWQSLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQSNR 60

Query: 61  FASLTANAIPNSLVLAN-TIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD 120
           FASLTANAIPNSLVLAN TIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD
Sbjct: 61  FASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD 120

Query: 121 ESEGKALMEDEEIGASERRKKQ 142
           ESEGKALMED+E GASERRKKQ
Sbjct: 121 ESEGKALMEDDEKGASERRKKQ 142

[Close]

BLAST of CmaCh01G011220 vs. NCBI nr
Match: KAG6585878.1 (hypothetical protein SDJN03_18611, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 257.3 bits (656), Expect = 9.1e-65
Identity = 137/142 (96.48%), Postives = 138/142 (97.18%), Query Frame = 0


Query: 1   MAWQSLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPPIYISPQSNR 60
           MAWQ LYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQP IYISPQSNR
Sbjct: 1   MAWQRLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQSNR 60

Query: 61  FASLTANAIPNSLVLAN-TIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD 120
           FASLTANAIPNSLVLAN TIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD
Sbjct: 61  FASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD 120

Query: 121 ESEGKALMEDEEIGASERRKKQ 142
           ESEGKALMED+E GASERRKKQ
Sbjct: 121 ESEGKALMEDDEKGASERRKKQ 142

[Close]

BLAST of CmaCh01G011220 vs. NCBI nr
Match: XP_023525256.1 (uncharacterized protein LOC111788910 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 251.5 bits (641), Expect = 5.0e-63
Identity = 133/142 (93.66%), Postives = 136/142 (95.77%), Query Frame = 0


Query: 1   MAWQSLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPPIYISPQSNR 60
           MAWQSLYLPPPVKSVF MNCITSAIELP+LRSH KPNRRQR+QNNSQSQP +YISPQSNR
Sbjct: 1   MAWQSLYLPPPVKSVFPMNCITSAIELPILRSHLKPNRRQRQQNNSQSQPRMYISPQSNR 60

Query: 61  FASLTANAIPNSLVLAN-TIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD 120
           FASLTANAIPNSLVLAN TIPPSQSGDVSVLLQTSGVLLIVY IANFIVPEFIMKSYSTD
Sbjct: 61  FASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYFIANFIVPEFIMKSYSTD 120

Query: 121 ESEGKALMEDEEIGASERRKKQ 142
           ESEGKALMEDEE GASERRKKQ
Sbjct: 121 ESEGKALMEDEEKGASERRKKQ 142

[Close]

BLAST of CmaCh01G011220 vs. TAIR 10
Match: AT1G50732.1 (unknown protein. )

HSP 1 Score: 45.8 bits (107), Expect = 3.9e-05
Identity = 30/94 (31.91%), Postives = 50/94 (53.19%), Query Frame = 0


Query: 39  RQRKQNNSQSQPPIYISPQSNRFASLT-------ANAIPNSLVL---ANTIPPSQSGDVS 98
           +Q KQ  S  +  ++    S+  +SL+       +N   N   L   A+ +PPS+SGD++
Sbjct: 19  QQAKQEESLRRKQVFFFLSSSSPSSLSTKHQWQISNYPKNGFRLKPKASVLPPSESGDIT 78

Query: 99  VLLQTSGVLLIVYLIANFIVPEFIMKSYSTDESE 123
             L  SG ++ +YL+ NF+VP  + KS   +E E
Sbjct: 79  TFLFVSGAMISMYLVTNFLVPSLLFKSLQGEEEE 112

The following BLAST results are available for this feature:

BLAST of CmaCh01G011220 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh01G011220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J030	2.9e-69	100.00	uncharacterized protein LOC111480699 OS=Cucurbita maxima OX=3661 GN=LOC111480699...	[more]
A0A6J1FK57	1.2e-65	97.18	uncharacterized protein LOC111446047 OS=Cucurbita moschata OX=3662 GN=LOC1114460...	[more]
A0A5D3BI04	2.6e-17	61.61	Glutathione transport system permease gsiD OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0K9M2	1.3e-16	58.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G420170 PE=4 SV=1	[more]
B9SV97	2.0e-09	40.00	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1303160 PE=4 SV=1	[more]

BLAST of CmaCh01G011220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022981640.1	6.1e-69	100.00	uncharacterized protein LOC111480699 [Cucurbita maxima]	[more]
XP_022940449.1	2.4e-65	97.18	uncharacterized protein LOC111446047 [Cucurbita moschata] >KAG7037370.1 hypothet...	[more]
KAG6607795.1	2.4e-65	97.18	hypothetical protein SDJN03_01137, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6585878.1	9.1e-65	96.48	hypothetical protein SDJN03_18611, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023525256.1	5.0e-63	93.66	uncharacterized protein LOC111788910 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh01G011220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50732.1	3.9e-05	31.91	unknown protein.	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37196	TRANSMEMBRANE PROTEIN	coord: 18..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G011220.1	CmaCh01G011220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane