Homology
BLAST of CmaCh01G011070 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 650.6 bits (1677), Expect = 3.2e-185
Identity = 397/1040 (38.17%), Postives = 582/1040 (55.96%), Query Frame = 0
Query: 2 TGARSAFSELDSGIRGTVKFGDGSVVEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANLV 61
T R F +G GTVK G+ S +I G G I + G L DV +P L+ NL+
Sbjct: 305 TPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLI 364
Query: 62 SLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRLYILELEIDQPVSLSAKTEEVS 121
S LD G ++ + R T LY EI Q L+A +E+S
Sbjct: 365 SGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGT--LYRTNAEICQG-ELNAAQDEIS 424
Query: 122 W-RWHARYGHLNFPALEKLQKKELVHGLPEIKGVN-KLCDGCLIGKQRRTPFPSRTAYRA 181
WH R GH++ L+ L KK L+ KG K CD CL GKQ R F + ++ R
Sbjct: 425 VDLWHKRMGHMSEKGLQILAKKSLI---SYAKGTTVKPCDYCLFGKQHRVSFQT-SSERK 484
Query: 182 DEPLELVHGDTCGPIKPATPGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKARAE 241
L+LV+ D CGP++ + GG F+ +DD SR +W+ +L+ K + + ++ A E
Sbjct: 485 LNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVE 544
Query: 242 AECEKKMRVLRTDRGGEFTSASFSKYCDEVGIQRHLTAPYSPQQNGVVERRNQTIVGTAR 301
E +K++ LR+D GGE+TS F +YC GI+ T P +PQ NGV ER N+TIV R
Sbjct: 545 RETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVR 604
Query: 302 SLLVTAGMPGRFWGEAVMTAVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCVAYM 361
S+L A +P FWGEAV TA YL+NRSP+ L + P W NK+ + H +VFGC A+
Sbjct: 605 SMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFA 664
Query: 362 KVTRPHLAKLDPRGLKVVFIGYEPGSKAYRLYDPVGGRAHVSRDVVFDESTFWQWNDVIE 421
V + KLD + + +FIGY YRL+DPV + SRDVVF ES D+ E
Sbjct: 665 HVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSE 724
Query: 422 ADRN---PNQFTVEYLVTEPEEGGAQHQETSPPPAGAPPEPVEFATPRTADSTLDADHDT 481
+N PN T+ P + E S G P V + + + +H T
Sbjct: 725 KVKNGIIPNFVTIPSTSNNPTSAESTTDEVS--EQGEQPGEVIEQGEQLDEGVEEVEHPT 784
Query: 482 DLEARYRRMDDLVGGGEPPGLAARELEEVAELHAVSADEPNTFAEA----EKNPCWRKAM 541
E +++ + E P + +R + EP + E EKN KAM
Sbjct: 785 QGEEQHQPL----RRSERPRVESRRYPSTEYVLISDDREPESLKEVLSHPEKNQL-MKAM 844
Query: 542 QEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVD 601
QEEM S+ +N T+ L ++P G R + KWVFKLK++ ++V++KARLV KG+ QK+G+D
Sbjct: 845 QEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGID 904
Query: 602 FEEVFAPVARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPGFLDNDNP 661
F+E+F+PV ++ S+R +L++AA EV +DVK+AFL+G+L+E +Y+ QP GF
Sbjct: 905 FDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKK 964
Query: 662 NKVLRLHKALYGLRQAPRAWNAKLDSTLLSLNFKRCASEHGMYTYGHGKKR-LIVGVYVD 721
+ V +L+K+LYGL+QAPR W K DS + S + + S+ +Y + +I+ +YVD
Sbjct: 965 HMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVD 1024
Query: 722 DLIITGGDVGVLGRFKKEMSKNFEMSDLGVLSYYLGIEV--QQNSSGISICQSAYARKLL 781
D++I G D G++ + K ++SK+F+M DLG LG+++ ++ S + + Q Y ++L
Sbjct: 1025 DMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVL 1084
Query: 782 DTTGLVDSNPTRTPMEARLQLRKAGTTTTVDSTN------YRSIVGSLRY-LVNSRPDLA 841
+ + ++ P TP+ L+L K TTV+ Y S VGSL Y +V +RPD+A
Sbjct: 1085 ERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIA 1144
Query: 842 YSVGYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVRYCAGSEKEKLKLVGYSDSDMAGD 901
++VG VSRF+E P +EH AVK ILRY+ GT G C G LK GY+D+DMAGD
Sbjct: 1145 HAVGVVSRFLENPGKEHWEAVKWILRYLRGTT--GDCLCFGGSDPILK--GYTDADMAGD 1204
Query: 902 VDDRKSTSGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAASMAATQGIWLARLMEEIIG 961
+D+RKS++G ++ SGGAI WQS QK VALS+ EAEYIAA+ + IWL R ++E +G
Sbjct: 1205 IDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQE-LG 1264
Query: 962 RESDPPMLYIDNKATISLIKNPVLHDRSKHIEIRFHYIRECADRGLIKIDFIRTEEQLGD 1021
++Y D+++ I L KN + H R+KHI++R+H+IRE D +K+ I T E D
Sbjct: 1265 LHQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPAD 1324
Query: 1022 IFTKSLARVKFEELRSKIGV 1023
+ TK + R KFE + +G+
Sbjct: 1325 MLTKVVPRNKFELCKELVGM 1325
BLAST of CmaCh01G011070 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 546.6 bits (1407), Expect = 6.5e-154
Identity = 346/1094 (31.63%), Postives = 547/1094 (50.00%), Query Frame = 0
Query: 27 VEIEGRGTILFVSKGG------EHR-KLTDVYFIPRLKANLVSLGQLDETGCFISIERGL 86
+ + +G ++ +K G +H L DV F NL+S+ +L E G I ++
Sbjct: 318 IAVAKQGEFIYATKRGIVRLRNDHEITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSG 377
Query: 87 LKICDNQRRLLTQARRTTNRLYILELEIDQPVSLSAKTEEVSWRWHARYGHLNFPALEKL 146
+ I N ++ + N + + Q S++AK + WH R+GH++ L ++
Sbjct: 378 VTISKNGLMVVKNSGMLNN----VPVINFQAYSINAKHKNNFRLWHERFGHISDGKLLEI 437
Query: 147 QKKELVHGLPEIKGVN---KLCDGCLIGKQRRTPFPS-RTAYRADEPLELVHGDTCGPIK 206
++K + + + ++C+ CL GKQ R PF + PL +VH D CGPI
Sbjct: 438 KRKNMFSDQSLLNNLELSCEICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPIT 497
Query: 207 PATPGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKARAEAECEKKMRVLRTDRGG 266
P T K+ F++ VD + + L++ KS+ + A++EA K+ L D G
Sbjct: 498 PVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGR 557
Query: 267 EFTSASFSKYCDEVGIQRHLTAPYSPQQNGVVERRNQTIVGTARSLLVTAGMPGRFWGEA 326
E+ S ++C + GI HLT P++PQ NGV ER +TI AR+++ A + FWGEA
Sbjct: 558 EYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEA 617
Query: 327 VMTAVYLLNRSPTRSL--DGKTPYEAWYNKKPTVHHFRVFGCVAYMKVTRPHLAKLDPRG 386
V+TA YL+NR P+R+L KTPYE W+NKKP + H RVFG Y+ + K D +
Sbjct: 618 VLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKNKQ-GKFDDKS 677
Query: 387 LKVVFIGYEPGSKAYRLYDPVGGRAHVSRDVVFD------------ESTFWQWNDVIEAD 446
K +F+GYEP ++L+D V + V+RDVV D E+ F + + E
Sbjct: 678 FKSIFVGYEP--NGFKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENK 737
Query: 447 RNPNQFTVEYLVTEPEEG----------GAQHQETSPPPAGA--------PPEPVEFATP 506
PN P E ++ E P + P E E
Sbjct: 738 NFPNDSRKIIQTEFPNESKECDNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNI 797
Query: 507 RTADSTLDADHDTDLEARYRRMDDLV----GGGEP------------------------- 566
+ + +++ E++ R+ DD + G G P
Sbjct: 798 QFLKDSKESNKYFLNESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDG 857
Query: 567 --------------PGLAARELEE-----VAELHAVSADEPNTFAE---AEKNPCWRKAM 626
P ++ E + V H + D PN+F E + W +A+
Sbjct: 858 IEIINRRSERLKTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAI 917
Query: 627 QEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVD 686
E+ + N TW++ P + +WVF +K NE G +++KARLVA+G+ QK +D
Sbjct: 918 NTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQID 977
Query: 687 FEEVFAPVARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPGFLDNDNP 746
+EE FAPVAR+ S RF+L++ ++ +VH MDVK+AFLNG LKE +Y+R P G + N
Sbjct: 978 YEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGI--SCNS 1037
Query: 747 NKVLRLHKALYGLRQAPRAWNAKLDSTLLSLNFKRCASEHGMYTYGHG--KKRLIVGVYV 806
+ V +L+KA+YGL+QA R W + L F + + +Y G + + V +YV
Sbjct: 1038 DNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYV 1097
Query: 807 DDLIITGGDVGVLGRFKKEMSKNFEMSDLGVLSYYLGIEVQQNSSGISICQSAYARKLLD 866
DD++I GD+ + FK+ + + F M+DL + +++GI ++ I + QSAY +K+L
Sbjct: 1098 DDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILS 1157
Query: 867 TTGLVDSNPTRTPMEARLQLRKAGTTTTVDSTNYRSIVGSLRY-LVNSRPDLAYSVGYVS 926
+ + N TP+ +++ + +T RS++G L Y ++ +RPDL +V +S
Sbjct: 1158 KFNMENCNAVSTPLPSKINYELLNSDEDC-NTPCRSLIGCLMYIMLCTRPDLTTAVNILS 1217
Query: 927 RFMEAPREEHLVAVKRILRYVAGTRDWGVRYCAGSEKEKLKLVGYSDSDMAGDVDDRKST 986
R+ E +KR+LRY+ GT D + + E K++GY DSD AG DRKST
Sbjct: 1218 RYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFEN-KIIGYVDSDWAGSEIDRKST 1277
Query: 987 SGMIY-FLSGGAICWQSTKQKVVALSSCEAEYIAASMAATQGIWLARLMEEIIGRESDPP 1023
+G ++ ICW + +Q VA SS EAEY+A A + +WL L+ I + +P
Sbjct: 1278 TGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPI 1337
BLAST of CmaCh01G011070 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 538.1 bits (1385), Expect = 2.3e-151
Identity = 353/1113 (31.72%), Postives = 520/1113 (46.72%), Query Frame = 0
Query: 19 VKFGDGSVVEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANLVSLGQL-DETGCFISIER 78
V DGS + I G+ +K L ++ ++P + NL+S+ +L + G +
Sbjct: 360 VMVADGSTIPISHTGSTSLSTK-SRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFP 419
Query: 79 GLLKICDNQRRLLTQARRTTNRLYILELEIDQPVSL--SAKTEEVSWRWHARYGHLNFPA 138
++ D + +T + LY + QPVSL S ++ WHAR GH PA
Sbjct: 420 ASFQVKDLNTGVPLLQGKTKDELYEWPIASSQPVSLFASPSSKATHSSWHARLGH---PA 479
Query: 139 LEKLQKKELVHGLPEIKGVNKL--CDGCLIGKQRRTPFPSRTAYRADEPLELVHGDT-CG 198
L + L + +K C CLI K + PF S++ + PLE ++ D
Sbjct: 480 PSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPF-SQSTINSTRPLEYIYSDVWSS 539
Query: 199 PIKPATPGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKARAEAECEKKMRVLRTD 258
PI + +++ VD +R+ WL L+ KS+ E K E + ++ +D
Sbjct: 540 PI--LSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSD 599
Query: 259 RGGEFTSASFSKYCDEVGIQRHLTAPYSPQQNGVVERRNQTIVGTARSLLVTAGMPGRFW 318
GGEF + +Y + GI + P++P+ NG+ ER+++ IV T +LL A +P +W
Sbjct: 600 NGGEF--VALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYW 659
Query: 319 GEAVMTAVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCVAYMKVTRPHLAKLDPR 378
A AVYL+NR PT L ++P++ + P RVFGC Y + + KLD +
Sbjct: 660 PYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDK 719
Query: 379 GLKVVFIGYEPGSKAYRLYDPVGGRAHVSRDVVFDESTFWQWNDVIEADRNPNQFTVEYL 438
+ VF+GY AY R ++SR V FDE+ F N + Q
Sbjct: 720 SRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSC 779
Query: 439 VTEPEEGGAQHQETSPPP-------AGAPPE--PVEFATPRTADSTLDADHDTDLEARYR 498
V P P P A PP F + + S LD+ + +
Sbjct: 780 VWSPHTTLPTRTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPE 839
Query: 499 RMDDLVGGGEP--------------------------PGLAARELEEVAE---------- 558
G +P P A+ L A+
Sbjct: 840 PTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTT 899
Query: 559 ---------------------------------------------------------LHA 618
+
Sbjct: 900 SASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSL 959
Query: 619 VSADEPNTFAEAEKNPCWRKAMQEEMTSITENQTWSLEDMPPGH-RAIGLKWVFKLKRNE 678
+ EP T +A K+ WR AM E+ + N TW L PP H +G +W+F K N
Sbjct: 960 AAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNS 1019
Query: 679 KGEVVKHKARLVAKGYVQKQGVDFEEVFAPVARLESVRFLLAIAAHHSWEVHHMDVKSAF 738
G + ++KARLVAKGY Q+ G+D+ E F+PV + S+R +L +A SW + +DV +AF
Sbjct: 1020 DGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAF 1079
Query: 739 LNGELKETVYVRQPPGFLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDSTLLSLNFKRCA 798
L G L + VY+ QPPGF+D D PN V +L KALYGL+QAPRAW +L + LL++ F
Sbjct: 1080 LQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSV 1139
Query: 799 SEHGMYTYGHGKKRLIVGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDLGVLSYYLGIE 858
S+ ++ GK + + VYVDD++ITG D +L +S+ F + D L Y+LGIE
Sbjct: 1140 SDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIE 1199
Query: 859 VQQNSSGISICQSAYARKLLDTTGLVDSNPTRTPMEARLQLRKAGTTTTVDSTNYRSIVG 918
++ +G+ + Q Y LL T ++ + P TPM +L T D T YR IVG
Sbjct: 1200 AKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVG 1259
Query: 919 SLRYLVNSRPDLAYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVRYCAGSEKEKL 978
SL+YL +RPD++Y+V +S+FM P EEHL A+KRILRY+AGT + G+ G+ L
Sbjct: 1260 SLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGN---TL 1319
Query: 979 KLVGYSDSDMAGDVDDRKSTSGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAASMAATQ 1023
L YSD+D AGD DD ST+G I +L I W S KQK V SS EAEY + + +++
Sbjct: 1320 SLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSE 1379
BLAST of CmaCh01G011070 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 518.5 bits (1334), Expect = 1.9e-145
Identity = 346/1118 (30.95%), Postives = 529/1118 (47.32%), Query Frame = 0
Query: 19 VKFGDGSVVEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANLVSLGQLDETGCFISIE-- 78
V DGS + I G+ + L V ++P + NL+S+ +L T +S+E
Sbjct: 339 VMIADGSTIPITHTGS-ASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTN-RVSVEFF 398
Query: 79 RGLLKICDNQRRLLTQARRTTNRLYILELEIDQPVSLSAK--TEEVSWRWHARYGHLNFP 138
++ D + +T + LY + Q VS+ A ++ WH+R GH P
Sbjct: 399 PASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGH---P 458
Query: 139 ALEKLQKKELVHGLPEIKGVNKL--CDGCLIGKQRRTPFPSRTAYRADEPLELVHGDT-C 198
+L L H LP + +KL C C I K + PF S + + +PLE ++ D
Sbjct: 459 SLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPF-SNSTITSSKPLEYIYSDVWS 518
Query: 199 GPIKPATPGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKARAEAECEKKMRVLRT 258
PI + +++ VD +R+ WL L+ KS+ + K+ E + ++ L +
Sbjct: 519 SPI--LSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYS 578
Query: 259 DRGGEFTSASFSKYCDEVGIQRHLTAPYSPQQNGVVERRNQTIVGTARSLLVTAGMPGRF 318
D GGEF Y + GI + P++P+ NG+ ER+++ IV +LL A +P +
Sbjct: 579 DNGGEF--VVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTY 638
Query: 319 WGEAVMTAVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCVAYMKVTRPHLAKLDP 378
W A AVYL+NR PT L ++P++ + + P +VFGC Y + + KL+
Sbjct: 639 WPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLED 698
Query: 379 RGLKVVFIGYEPGSKAYRLYDPVGGRAHVSRDVVFDESTF--------WQWNDVIEADRN 438
+ + F+GY AY GR + SR V FDE F + +D
Sbjct: 699 KSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSA 758
Query: 439 PNQFTVEYLVTEPEEGGA-----QHQETSPPPAGAPP------------EPVEFATPRTA 498
PN + L T P A H +TSP P +P ++P ++
Sbjct: 759 PNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSS 818
Query: 499 DSTLDADHDTDLEARYRRMDDLVGGGE--------------------------------- 558
+ T + + A+ + +
Sbjct: 819 EPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPT 878
Query: 559 ---------------------PPGLAARELEEV-----AELHAVSA-------------- 618
PP L A + +V H+++
Sbjct: 879 PSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYS 938
Query: 619 --------DEPNTFAEAEKNPCWRKAMQEEMTSITENQTWSL-EDMPPGHRAIGLKWVFK 678
EP T +A K+ WR+AM E+ + N TW L PP +G +W+F
Sbjct: 939 YATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFT 998
Query: 679 LKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPVARLESVRFLLAIAAHHSWEVHHMD 738
K N G + ++KARLVAKGY Q+ G+D+ E F+PV + S+R +L +A SW + +D
Sbjct: 999 KKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLD 1058
Query: 739 VKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDSTLLSLN 798
V +AFL G L + VY+ QPPGF+D D P+ V RL KA+YGL+QAPRAW +L + LL++
Sbjct: 1059 VNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVG 1118
Query: 799 FKRCASEHGMYTYGHGKKRLIVGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDLGVLSY 858
F S+ ++ G+ + + VYVDD++ITG D +L +S+ F + + L Y
Sbjct: 1119 FVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHY 1178
Query: 859 YLGIEVQQNSSGISICQSAYARKLLDTTGLVDSNPTRTPMEARLQLRKAGTTTTVDSTNY 918
+LGIE ++ G+ + Q Y LL T ++ + P TPM +L T D T Y
Sbjct: 1179 FLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEY 1238
Query: 919 RSIVGSLRYLVNSRPDLAYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVRYCAGS 978
R IVGSL+YL +RPDL+Y+V +S++M P ++H A+KR+LRY+AGT D G+ G+
Sbjct: 1239 RGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGN 1298
Query: 979 EKEKLKLVGYSDSDMAGDVDDRKSTSGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAAS 1023
L L YSD+D AGD DD ST+G I +L I W S KQK V SS EAEY + +
Sbjct: 1299 ---TLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVA 1358
BLAST of CmaCh01G011070 vs. ExPASy Swiss-Prot
Match:
P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)
HSP 1 Score: 204.5 bits (519), Expect = 6.0e-51
Identity = 114/305 (37.38%), Postives = 173/305 (56.72%), Query Frame = 0
Query: 623 MDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDSTLLS 682
MDV +AFLN + E +YV+QPPGF++ NP+ V L+ +YGL+QAP WN +++TL
Sbjct: 1 MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60
Query: 683 LNFKRCASEHGMYTYGHGKKRLIVGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDLGVL 742
+ F R EHG+Y + + VYVDDL++ + R K+E++K + M DLG +
Sbjct: 61 IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120
Query: 743 SYYLGIEVQQNSSG-ISICQSAYARKLLDTTGLVDSNPTRTPMEARLQLRKAGTTTTVDS 802
+LG+ + Q+S+G I++ Y K + + T+TP+ L + + D
Sbjct: 121 DKFLGLNIHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDI 180
Query: 803 TNYRSIVGSLRYLVNS-RPDLAYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVRY 862
T Y+SIVG L + N+ RPD++Y V +SRF+ PR HL + +R+LRY+ TR ++Y
Sbjct: 181 TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKY 240
Query: 863 CAGSEKEKLKLVGYSDSDMAGDVDDRKSTSGMIYFLSGGAICWQSTKQK-VVALSSCEAE 922
+GS+ L L Y D+ D ST G + L+G + W S K K V+ + S EAE
Sbjct: 241 RSGSQ---LALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAE 300
Query: 923 YIAAS 925
YI AS
Sbjct: 301 YITAS 302
BLAST of CmaCh01G011070 vs. ExPASy TrEMBL
Match:
Q7XPB1 (OSJNBb0026E15.10 protein OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBb0026E15.10 PE=4 SV=2)
HSP 1 Score: 1330.9 bits (3443), Expect = 0.0e+00
Identity = 655/1037 (63.16%), Postives = 801/1037 (77.24%), Query Frame = 0
Query: 1 MTGARSAFSELDSGIRGTVKFGDGSVVEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANL 60
MTG+RSAF+ELD+ + GTV+FGDGSVV IEGR T+LF + GEHR + VY+IPRL AN+
Sbjct: 405 MTGSRSAFAELDTAVTGTVRFGDGSVVRIEGRVTVLFSCRFGEHRGIAGVYYIPRLTANI 464
Query: 61 VSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRLYILELEIDQPVSLSAKTEEV 120
VSLGQLD +G + I G+L + D + LL + RR+ + LY ++L+ID+PV L+A++ E
Sbjct: 465 VSLGQLDRSGSKVLIHHGILHVWDPRGHLLVRVRRSDDCLYTIKLDIDRPVCLAARSAEP 524
Query: 121 SWRWHARYGHLNFPALEKLQKKELVHGLPEIKGVNKLCDGCLIGKQRRTPFPSRTAYRAD 180
+WRWHARYGHLNFPAL KL ++E+V GLP ++ V ++CDGCL+GKQRR FP+++ YRAD
Sbjct: 525 AWRWHARYGHLNFPALRKLAQQEMVRGLPLLQQVTQVCDGCLLGKQRRAAFPTQSKYRAD 584
Query: 181 EPLELVHGDTCGPIKPATPGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKARAEA 240
E LELVHGD CGPI+PATP G FLLLVDD SR+MWLT++++K EAA A+K +ARAE
Sbjct: 585 EHLELVHGDLCGPIEPATPAGNRYFLLLVDDMSRYMWLTMIRSKDEAANAIKHFQARAEV 644
Query: 241 ECEKKMRVLRTDRGGEFTSASFSKYCDEVGIQRHLTAPYSPQQNGVVERRNQTIVGTARS 300
E +K+R LR DRG EFTS F +YC +G+ R LTAPYSPQQNGVVERRNQTIV TARS
Sbjct: 645 ESGRKLRALRMDRGSEFTSIEFGEYCANLGVGRQLTAPYSPQQNGVVERRNQTIVATARS 704
Query: 301 LLVTAGMPGRFWGEAVMTAVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCVAYMK 360
++ G+PGRFWGEA+ TAV+LLNRSPT+SLD +TPYEAWY + P VH R FGCV ++K
Sbjct: 705 MMKAKGVPGRFWGEAMSTAVFLLNRSPTKSLDNQTPYEAWYGQWPAVHFLRTFGCVGHVK 764
Query: 361 VTRPHLAKLDPRGLKVVFIGYEPGSKAYRLYDPVGGRAHVSRDVVFDESTFWQWNDVI-E 420
+T+P L KLD R +V +GYE GSKAYRLYDPV R HVSRDVVFDE W W V +
Sbjct: 765 ITKPGLKKLDDRSAPMVLLGYEQGSKAYRLYDPVSERVHVSRDVVFDEDIAWDWGPVTPD 824
Query: 421 ADRNPNQFTVEYLVT--------------EPEEGGAQHQETSPPPAGAPPEPVEFATPRT 480
FTVE +VT P T PP+ PE VEF TP T
Sbjct: 825 GAPQLEPFTVEQVVTTTIGTAPASSPTPPSPPSPAPSAPTTPAPPSPPSPEAVEFVTPPT 884
Query: 481 ADSTLDADHDTDLEARYRRMDDLVGGGEPPGLAARELEEVAELHAVSADEPNTFAEAEKN 540
DS LDAD D D+ RYR +D+L+G PPG A R LE++ ELH VSADEP + AEAE +
Sbjct: 885 QDSILDADADDDVVPRYRLVDNLLGNASPPGHAPRVLEQL-ELHVVSADEPASLAEAEAD 944
Query: 541 PCWRKAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGY 600
P WR AMQ+E+ +I +N TWSL D+P GHRAIGLKWV+KLKR+E+G +V++KARLVAKGY
Sbjct: 945 PSWRGAMQDELNAIVDNDTWSLTDLPHGHRAIGLKWVYKLKRDEQGAIVRYKARLVAKGY 1004
Query: 601 VQKQGVDFEEVFAPVARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPG 660
VQ+QGVDF+EVFA VARLESVR LLA+AAH W+VHHMDVKSAFLNGEL E VYV QPPG
Sbjct: 1005 VQRQGVDFDEVFALVARLESVRLLLAVAAHQGWQVHHMDVKSAFLNGELLEEVYVSQPPG 1064
Query: 661 FLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDSTLLSLNFKRCASEHGMYTYGHGKKRLI 720
F+D+++ NKV RLHKALYGLRQAPRAWNAKLDS+LLSL F R +SEHG+YT G +RL+
Sbjct: 1065 FVDDNHKNKVYRLHKALYGLRQAPRAWNAKLDSSLLSLGFHRSSSEHGVYTRTRGGRRLM 1124
Query: 721 VGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDLGVLSYYLGIEVQQNSSGISICQSAYA 780
VGVYVDDLIITG + FK EM K F+MSDLG L YYLGIEV Q+S GI++ Q+AYA
Sbjct: 1125 VGVYVDDLIITGDHDDEIRSFKGEMMKLFKMSDLGALRYYLGIEVTQDSDGITLGQAAYA 1184
Query: 781 RKLLDTTGLVDSNPTRTPMEARLQLRKAGTTTTVDSTNYRSIVGSLRYLVNSRPDLAYSV 840
K+L+ GL D NP +TPME RL+LRK VD+T YRS+VGSLRYLVN+RPDLA+SV
Sbjct: 1185 GKILEKAGLKDCNPCQTPMEVRLKLRKGSDFPLVDATLYRSLVGSLRYLVNTRPDLAFSV 1244
Query: 841 GYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVRYCAGSEKEKLKLVGYSDSDMAGDVDD 900
GYVSRFME+PRE+HL AV+RILRYVAGTR WG+R+ G+ LVGYSDSD+AGD D+
Sbjct: 1245 GYVSRFMESPREDHLAAVRRILRYVAGTRCWGIRFGPGARCALPMLVGYSDSDLAGDPDE 1304
Query: 901 RKSTSGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAASMAATQGIWLARLMEEIIGRES 960
RKSTSG I+F++GG + WQS+KQKVVALSSCEAEYIAA+ A QG+WLARL+ E++G E
Sbjct: 1305 RKSTSGQIFFINGGPVTWQSSKQKVVALSSCEAEYIAAAAATCQGVWLARLLAEVLGDEI 1364
Query: 961 DPPMLYIDNKATISLIKNPVLHDRSKHIEIRFHYIRECADRGLIKIDFIRTEEQLGDIFT 1020
P+L +DN++TISLIKNPV HDRSKHI++++HYIRECA++ LI++ F+ T EQLGDIFT
Sbjct: 1365 TAPLLKVDNQSTISLIKNPVHHDRSKHIDVKYHYIRECAEKKLIEMMFVGTAEQLGDIFT 1424
Query: 1021 KSLARVKFEELRSKIGV 1023
KSL R +F+ELRSKIGV
Sbjct: 1425 KSLGRTRFQELRSKIGV 1440
BLAST of CmaCh01G011070 vs. ExPASy TrEMBL
Match:
A0B9X7 (OSIGBa0135C09.3 protein OS=Oryza sativa OX=4530 GN=OSIGBa0135C09.3 PE=4 SV=1)
HSP 1 Score: 1294.3 bits (3348), Expect = 0.0e+00
Identity = 643/1038 (61.95%), Postives = 785/1038 (75.63%), Query Frame = 0
Query: 1 MTGARSAFSELDSGIRGTVKFGDGSVVEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANL 60
MTG+RSAF++LD+ + GTV+FGDGSVV IEGRGT+LF + GEHR + VY+IPRL AN+
Sbjct: 338 MTGSRSAFAKLDTAVTGTVRFGDGSVVRIEGRGTVLFSCRFGEHRGIAGVYYIPRLTANI 397
Query: 61 VSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRLYILELEIDQPVSLSAKTEEV 120
VSLGQLD +G + I G+L++ D + LL + RR+ + LY ++L ID+PV L+A++ +
Sbjct: 398 VSLGQLDRSGSKVLIHHGVLRVWDPRGHLLVRVRRSDDCLYTIKLNIDRPVYLAARSAKP 457
Query: 121 SWRWHARYGHLNFPALEKLQKKELVHGLPEIKGVNKLCDGCLIGKQRRTPFPSRTAYRAD 180
+WRWHARYGHLNFP+L KL ++E+V GLP ++ V ++CDGCL+GKQRR FP+++ YRAD
Sbjct: 458 AWRWHARYGHLNFPSLRKLAQQEMVRGLPLLQQVTQVCDGCLLGKQRRAAFPTQSKYRAD 517
Query: 181 EPLELVHGDTCGPIKPATPGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKARAEA 240
E LELVHGD CGPI+PATP G FLLLVDD SR+MWLTL+++K EAA A+K +A AE
Sbjct: 518 EHLELVHGDLCGPIEPATPAGNRYFLLLVDDMSRYMWLTLIRSKDEAANAIKHFQAHAEV 577
Query: 241 ECEKKMRVLRTDRGGEFTSASFSKYCDEVGIQRHLTAPYSPQQNGVVERRNQTIVGTARS 300
E +K+R LRTDRGGEFTS F +YC + + R LTAPYSPQQNGVVERRNQTIV TARS
Sbjct: 578 ESGRKLRALRTDRGGEFTSIEFGEYCANLRVGRQLTAPYSPQQNGVVERRNQTIVATARS 637
Query: 301 LLVTAGMPGRFWGEAVMTAVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCVAYMK 360
++ G+PGRFWGEA+ TAV+LLNRSPT+SLD +TPYEAWY ++P VH R FGCV ++K
Sbjct: 638 MMKAKGVPGRFWGEAMSTAVFLLNRSPTKSLDNQTPYEAWYGQRPAVHFLRTFGCVGHVK 697
Query: 361 VTRPHLAKLDPRGLKVVFIGYEPGSKAYRLYDPVGGRAHVSRDVVFDESTFWQWNDVIEA 420
+T+P L KLD R +V +GYE GSKAYRLYDPV R HVSRDVVFDE W W +
Sbjct: 698 ITKPGLKKLDDRSAPMVLLGYEQGSKAYRLYDPVSERVHVSRDVVFDEDAAWDWGP-LTP 757
Query: 421 DRNP--NQFTVEYLVT--------------EPEEGGAQHQETSPPPAGAPPEPVEFATPR 480
D P FTVE +VT P T PP+ PE VEF TP
Sbjct: 758 DGAPQLEPFTVEQVVTTTIGTAPASSLTPPSPPSPAPSAPTTPAPPSPPSPEAVEFVTPP 817
Query: 481 TADSTLDADHDTDLEARYRRMDDLVGGGEPPGLAARELEEVAELHAVSADEPNTFAEAEK 540
T DS LDAD D D+ RY +D+L+G PPG A R LE++ ELH VSADEP + AEAE
Sbjct: 818 TQDSILDADADDDVVPRYHLVDNLLGNASPPGHAPRVLEQL-ELHVVSADEPASLAEAEA 877
Query: 541 NPCWRKAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKG 600
+P WR AMQ+E+ +I +N TWSL D+P GHRAIGLKW ARLVAKG
Sbjct: 878 DPNWRGAMQDELNAIVDNDTWSLTDLPHGHRAIGLKW----------------ARLVAKG 937
Query: 601 YVQKQGVDFEEVFAPVARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPP 660
YVQ+QGVDF+EVFAPVARLE VR LLAIAAH W+VHHMDVKSAFLNGEL E VYV QPP
Sbjct: 938 YVQRQGVDFDEVFAPVARLELVRLLLAIAAHQGWQVHHMDVKSAFLNGELLEEVYVSQPP 997
Query: 661 GFLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDSTLLSLNFKRCASEHGMYTYGHGKKRL 720
GF+D+++ NKV RLHKALYGLRQAPRAWN KLDS+LLSL F R +SEHG+YT G +RL
Sbjct: 998 GFVDDNHKNKVYRLHKALYGLRQAPRAWNTKLDSSLLSLGFHRSSSEHGVYTRTRGGRRL 1057
Query: 721 IVGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDLGVLSYYLGIEVQQNSSGISICQSAY 780
VGVYVDDLIITG + FK EM K F+MSDLG L YYLGIEV Q+S GI++ Q+AY
Sbjct: 1058 TVGVYVDDLIITGDHDDEIRSFKGEMMKLFKMSDLGALRYYLGIEVTQDSDGITLGQAAY 1117
Query: 781 ARKLLDTTGLVDSNPTRTPMEARLQLRKAGTTTTVDSTNYRSIVGSLRYLVNSRPDLAYS 840
A K+L+ GL D NP +TPME RL+LRK VD+T YRS+VGSLRYLVN+RPDLA+S
Sbjct: 1118 AGKILEKAGLKDCNPCQTPMEVRLKLRKGSDFPLVDATLYRSLVGSLRYLVNTRPDLAFS 1177
Query: 841 VGYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVRYCAGSEKEKLKLVGYSDSDMAGDVD 900
VGYVSRFME+PRE+HL AV+RILRYVAGTR WG+R+ G+ LVGYSDSD+AGD D
Sbjct: 1178 VGYVSRFMESPREDHLAAVRRILRYVAGTRCWGIRFGPGARCALPMLVGYSDSDLAGDPD 1237
Query: 901 DRKSTSGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAASMAATQGIWLARLMEEIIGRE 960
+RKSTSG I+F++GG + WQS+K+KVVALSSCEAEYIAA+ QG+WLARL+ E++G E
Sbjct: 1238 ERKSTSGQIFFINGGPVTWQSSKKKVVALSSCEAEYIAAAATTCQGVWLARLLAEVLGDE 1297
Query: 961 SDPPMLYIDNKATISLIKNPVLHDRSKHIEIRFHYIRECADRGLIKIDFIRTEEQLGDIF 1020
P+L +DN++TISLIKNPV HDRSKHI++++HYIRECA++ LI++ F+ T EQLGDIF
Sbjct: 1298 IAAPLLKVDNQSTISLIKNPVHHDRSKHIDVKYHYIRECAEKKLIEMMFVGTAEQLGDIF 1357
Query: 1021 TKSLARVKFEELRSKIGV 1023
TKSL R +F+ELRSKIGV
Sbjct: 1358 TKSLGRTRFQELRSKIGV 1357
BLAST of CmaCh01G011070 vs. ExPASy TrEMBL
Match:
Q0J5Y3 (Os08g0389500 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0389500 PE=4 SV=1)
HSP 1 Score: 1261.1 bits (3262), Expect = 0.0e+00
Identity = 628/1055 (59.53%), Postives = 778/1055 (73.74%), Query Frame = 0
Query: 1 MTGARSAFSELDSGIRGTVKFGDGSVVEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANL 60
MTG RSAFSEL++GIRGTVKFGDGSVV IEGRGT+LF K GEH+ L VY IPRL N+
Sbjct: 399 MTGTRSAFSELNTGIRGTVKFGDGSVVGIEGRGTVLFKCKDGEHQALEGVYHIPRLTTNI 458
Query: 61 VSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRLYILELEIDQPVSLSAKTEEV 120
VSLGQLDE S E G+LKI + QRRLL + R+ NRLY+++L I +PV L+A+ ++
Sbjct: 459 VSLGQLDEEKFKWSCEDGVLKIWNKQRRLLAKVVRSPNRLYVVKLNIGRPVCLAAQGGDI 518
Query: 121 SWRWHARYGHLNFPALEKLQKKELVHGLPEIKGVNKLCDGCLIGKQRRTPFPSRTAYRAD 180
+WRWHAR+GHLNF ALEKL + +V GLP I V+++CD CL+GKQRR PFPS+ YRA
Sbjct: 519 AWRWHARFGHLNFRALEKLGRAVMVRGLPLINHVDQVCDSCLVGKQRRLPFPSKAKYRAK 578
Query: 181 EPLELVHGDTCGPIKPATPGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKARAEA 240
E LELVHGD CGP+ PATP G LFLLLVDD SR+MWL LL +K +A+ A+KR A AEA
Sbjct: 579 EKLELVHGDICGPVTPATPSGNKLFLLLVDDLSRYMWLILLSSKDQASVAIKRFLACAEA 638
Query: 241 ECEKKMRVLRTDRGGEFTSASFSKYCDEVGIQRHLTAPYSPQQNGVVERRNQTIVGTARS 300
E +K+R LRTDRGGEFT+ +F++YC E GIQRHLTAPY+PQQNGVVERRNQT++G ARS
Sbjct: 639 EAGRKLRTLRTDRGGEFTAHAFAEYCAEHGIQRHLTAPYTPQQNGVVERRNQTVMGMARS 698
Query: 301 LLVTAGMPGRFWGEAVMTAVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCVAYMK 360
++ +PG FWGEAV TAV+LLNR+PT+ +DGKTP+E W+ KP VH R FGCVA++K
Sbjct: 699 MMKAKSLPGWFWGEAVNTAVFLLNRAPTQCVDGKTPFEVWHGVKPPVHFLRTFGCVAHVK 758
Query: 361 VTRPHLAKLDPRGLKVVFIGYEPGSKAYRLYDPVGGRAHVSRDVVFDESTFWQWNDVIEA 420
LAKLD R + +VF+GYE G+KAYR Y+PV R HVSRD VF+E W+W A
Sbjct: 759 NGGQRLAKLDDRSMPMVFVGYEAGTKAYRFYNPVSRRVHVSRDAVFEEERSWEWGAEKGA 818
Query: 421 --DRNPNQFTVEYLVTEPE-EGG-------AQHQETSPP--------------------- 480
D + F VE+L T P +GG A + TS P
Sbjct: 819 GPDDDIEPFVVEHLATGPTGQGGPVAATPTATQRSTSAPAPMAPPATPSQAGTPTHGAGP 878
Query: 481 --PAGAPPEPVEFATPRTADSTLDADHDTDLEARYRRMDDLVGGGEPPGLAARELEEVAE 540
PA A +EFA+P D LD DHD D+ R+R +D+L+G PPGLA RE+ E
Sbjct: 879 RTPASASSPAIEFASPPQGDLDLDNDHDDDVPLRFRTVDNLLGASSPPGLAEREVTE--G 938
Query: 541 LHAVSADEPNTFAEAEKNPCWRKAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKR 600
L DEP T EA++ WR+AM EEM SI N+TWSL ++P G RAIGLKWVFK+K+
Sbjct: 939 LMVAIEDEPATAEEAKQVKEWREAMIEEMASIEHNKTWSLVELPAGQRAIGLKWVFKIKK 998
Query: 601 NEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPVARLESVRFLLAIAAHHSWEVHHMDVKS 660
+E G + KHKARLVAKGYVQ+QG+D+EEVFAPVAR+ESVR LLA+AAH SW VHHMDVKS
Sbjct: 999 DEHGNITKHKARLVAKGYVQRQGIDYEEVFAPVARIESVRVLLAVAAHRSWSVHHMDVKS 1058
Query: 661 AFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDSTLLSLNFKR 720
AFLNG+L E VYV+QPPGF+ + KVL+LHKALYGL+QAPRAWN+KLDS+LL L F R
Sbjct: 1059 AFLNGDLAEEVYVQQPPGFVAAGHERKVLKLHKALYGLKQAPRAWNSKLDSSLLMLGFAR 1118
Query: 721 CASEHGMYTYGHGKKRLIVGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDLGVLSYYLG 780
EHG+YT G+KRL+VG+YVDDLIITGG V+ FK EM F MSDLGVLSYYLG
Sbjct: 1119 SECEHGLYTRSDGEKRLVVGIYVDDLIITGGSTEVINTFKTEMKTLFRMSDLGVLSYYLG 1178
Query: 781 IEVQQNSSGISICQSAYARKLLDTTGLVDSNPTRTPMEARLQLRKAGTTTTVDSTNYRSI 840
IEV+Q GI + Q+AYA+K+L+ G+ NP TPMEARL+L K T+ VD+T YRS+
Sbjct: 1179 IEVRQGRRGIELLQAAYAKKILEKAGMGTCNPCATPMEARLKLSKQSTSPAVDATEYRSL 1238
Query: 841 VGSLRYLVNSRPDLAYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVRYCAGSEKE 900
+GSLRYL+N+RPD+A++VGY+SRFME PR+EHL A+K +LRYVAGT D+G+ Y +G
Sbjct: 1239 IGSLRYLMNTRPDMAFAVGYLSRFMENPRQEHLAAMKHLLRYVAGTIDYGLVYTSGD--T 1298
Query: 901 KLKLVGYSDSDMAGDVDDRKSTSGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAASMAA 960
+ LVGYSDSDMAGD+DDRKSTSG+IYFL G + WQS KQ+VVALSSCEAEYIA + AA
Sbjct: 1299 EFNLVGYSDSDMAGDIDDRKSTSGIIYFLGGNPVAWQSQKQRVVALSSCEAEYIAGAAAA 1358
Query: 961 TQGIWLARLMEEIIGRESDPPMLYIDNKATISLIKNPVLHDRSKHIEIRFHYIRECADRG 1020
QG+WL RL+++++G PP L +DN++ I+L KNPVLHDRSKHI+ +FH++REC D G
Sbjct: 1359 CQGVWLRRLLQDVVGVSGPPPQLKMDNQSAIALSKNPVLHDRSKHIDTKFHFLRECVDSG 1418
Query: 1021 LIKIDFIRTEEQLGDIFTKSLARVKFEELRSKIGV 1023
+++ F+ T+ QL DI TK+L R KF+ELR IGV
Sbjct: 1419 AVRLAFVSTQAQLADIMTKALGRSKFQELRELIGV 1449
BLAST of CmaCh01G011070 vs. ExPASy TrEMBL
Match:
A0A1P8YYM3 (Reverse transcriptase OS=Zea mays OX=4577 GN=FGENESH_28 PE=4 SV=1)
HSP 1 Score: 1236.9 bits (3199), Expect = 0.0e+00
Identity = 622/1065 (58.40%), Postives = 762/1065 (71.55%), Query Frame = 0
Query: 1 MTGARSAFSELDSGIRGTVKFGDGSVVEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANL 60
MTG+R FSELDSG+ GTVKFGDGSVV IEG+GT+LF + GEHR+L VY+IPRL N+
Sbjct: 575 MTGSRHVFSELDSGVTGTVKFGDGSVVNIEGKGTVLFALRSGEHRRLDGVYYIPRLMTNI 634
Query: 61 VSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRLYILELEIDQPVSLSAKTEEV 120
VSLGQ+DE G + IE G+L++ D QRRLL AK
Sbjct: 635 VSLGQMDEEGLKVVIEEGVLRLFDLQRRLL------------------------AKRGSA 694
Query: 121 SWRWHARYGHLNFPALEKLQKKELVHGLPEIKGVNKLCDGCLIGKQRRTPFPSRTAYRAD 180
+WRWH RYGHLNF AL KL+++E+V GLP I V+++C+ C++ KQ+R PFP YRA
Sbjct: 695 TWRWHERYGHLNFQALRKLEREEMVRGLPSIDRVDQVCEDCILAKQKRAPFPQAAKYRAQ 754
Query: 181 EPLELVHGDTCGPIKPATPGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKARAEA 240
E LELVHGD CGPI P TP G + FLLLVDD SRFMWLTLL++K++A + +AR E
Sbjct: 755 EELELVHGDLCGPISPPTPTGNAYFLLLVDDMSRFMWLTLLRSKADAPSTIMLFQARVER 814
Query: 241 ECEKKMRVLRTDRGGEFTSASFSKYCDEVGIQRHLTAPYSPQQNGVVERRNQTIVGTARS 300
EC KK++VLRTD GGEFTS F ++C GIQRH +APY+PQQNGVVERRNQ +V TARS
Sbjct: 815 ECGKKLKVLRTDNGGEFTSVQFGEHCAGEGIQRHFSAPYTPQQNGVVERRNQMVVSTARS 874
Query: 301 LLVTAGMPGRFWGEAVMTAVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCVAYMK 360
+L GMPG FWGEAV TAV+LLNR+PT +L+G+TPY+AWY KKP VH +VFGCVAY+K
Sbjct: 875 ILRARGMPGHFWGEAVHTAVFLLNRAPTAALNGRTPYQAWYGKKPAVHFLKVFGCVAYIK 934
Query: 361 VTRPHLAKLDPRGLKVVFIGYEPGSKAYRLYDPVGGRAHVSRDVVFDESTFWQWNDVIE- 420
RPHL+KL+ RG KVVFIGY+ GSKAYR YDPV R HVSRD VF+E W I+
Sbjct: 935 RPRPHLSKLEDRGQKVVFIGYQDGSKAYRFYDPVTERVHVSRDAVFNEGARLDWGGAIDT 994
Query: 421 ADRNPNQFTVEY------------------------LVTEPEEGGAQHQET--------- 480
D +P EY L P T
Sbjct: 995 VDMHPFTVAEEYELRHQQVEGSALEPISPEARTPAPLALSPRSASTPSTPTPHTVSPTAP 1054
Query: 481 -------SPPPAGAPPEPVEFATPRTADSTLDADHDTDLEARYRRMDDLVGGGEPPGLAA 540
SP AP ++FATP + D + DAD +L RYR +D++ G PGL
Sbjct: 1055 STSATASSPSTPQAPRTHIKFATPLSTDPSFDADDVGEL--RYRTLDNIHSVGAAPGLVH 1114
Query: 541 RELEEVAELHAVSADEPNTFAEAEKNPCWRKAMQEEMTSITENQTWSLEDMPPGHRAIGL 600
+ +E AELH VS +EP T EA+ +P W AM+EE+ SI +N+TWSL ++P GHRAIGL
Sbjct: 1115 HD-DEHAELHVVSVEEPRTLKEADGDPNWVAAMEEELASIRDNKTWSLAELPHGHRAIGL 1174
Query: 601 KWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPVARLESVRFLLAIAAHHSWE 660
KWV+K+KR+E +VK+KARLVAKGYVQ+ GVDF+EVFAPVAR ESVR LLAIAAH+ W
Sbjct: 1175 KWVYKVKRDENDNIVKYKARLVAKGYVQQPGVDFDEVFAPVARQESVRLLLAIAAHYGWG 1234
Query: 661 VHHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDST 720
VHHMDVKSAFLNGEL+E VYV+QPPGF+D + KVLRLHKALYGLRQAPRAWN KLD+
Sbjct: 1235 VHHMDVKSAFLNGELQEEVYVQQPPGFVDERHKYKVLRLHKALYGLRQAPRAWNQKLDAE 1294
Query: 721 LLSLNFKRCASEHGMYTYGHGKKRLIVGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDL 780
LL+L F RC +EHGMYT G G+ RLIVGVYVDDLIITGGD G + +FK +M K F+MSDL
Sbjct: 1295 LLALGFARCVNEHGMYTRGKGEARLIVGVYVDDLIITGGDAGAVAKFKVQMQKIFKMSDL 1354
Query: 781 GVLSYYLGIEVQQNSSGISICQSAYARKLLDTTGLVDSNPTRTPMEARLQLRKAGTTTTV 840
G+LSYYLG+EV Q + GI++ QSAYA K+L+ GL N + TPME +L+L K GTT +V
Sbjct: 1355 GLLSYYLGLEVTQGAQGITLRQSAYATKVLEKAGLAGCNASATPMEPKLKLLKEGTTPSV 1414
Query: 841 DSTNYRSIVGSLRYLVNSRPDLAYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVR 900
D T YRS++GSLRYL NSRPDLAY VGY+SRFMEAPR+EHL AVKR+LRYVAGT WG+
Sbjct: 1415 DVTEYRSLIGSLRYLCNSRPDLAYPVGYLSRFMEAPRQEHLAAVKRVLRYVAGTLHWGLH 1474
Query: 901 Y-CAGSEKEKLKLVGYSDSDMAGDVDDRKSTSGMIYFLSGGAICWQSTKQKVVALSSCEA 960
Y +G + +L+GYSDSD+AGDV+DRKSTSG+I+FL+GG + WQS KQKVVALSSCEA
Sbjct: 1475 YHPSGKNEGAPQLLGYSDSDLAGDVNDRKSTSGLIFFLAGGPVAWQSAKQKVVALSSCEA 1534
Query: 961 EYIAASMAATQGIWLARLMEEIIGRESDPPMLYIDNKATISLIKNPVLHDRSKHIEIRFH 1020
EYIAA+ AA + +WLARL+ E+IG P L +DNK+ I+L+KNPV HDRSKHI+++FH
Sbjct: 1535 EYIAAAAAACEAVWLARLLAELIGGAVLAPKLKVDNKSAIALMKNPVHHDRSKHIDVKFH 1594
Query: 1021 YIRECADRGLIKIDFIRTEEQLGDIFTKSLARVKFEELRSKIGVQ 1024
+IREC DR LI ++F+ TE QLGDI TK+L R + ELR I ++
Sbjct: 1595 FIRECCDRKLIDVEFVGTELQLGDILTKALGRTRLHELRGLIDMK 1612
BLAST of CmaCh01G011070 vs. ExPASy TrEMBL
Match:
Q0D6W3 (Os07g0434200 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0434200 PE=4 SV=1)
HSP 1 Score: 1212.2 bits (3135), Expect = 0.0e+00
Identity = 614/1041 (58.98%), Postives = 750/1041 (72.05%), Query Frame = 0
Query: 1 MTGARSAFSELDSGIRGTVKFGDGSVVEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANL 60
MTG+R+AFS++D+ + G V+ GDGS+V I GR TILF K GEH L Y++P L AN+
Sbjct: 171 MTGSRAAFSDIDTNVTGNVRLGDGSLVRIGGRRTILFACKNGEHHMLHKAYYLPCLAANI 230
Query: 61 VSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRLYILELEIDQPVSLSAKTEEV 120
+S+GQLDETG + +E G++++ D Q RLL + RT RLY+L++ + +PV L A+ E
Sbjct: 231 ISVGQLDETGFKVLVEDGVMRVWDEQHRLLARITRTPGRLYVLDINLARPVYLMARAGED 290
Query: 121 SWRWHARYGHLNFPALEKLQKKELVHGLPEIKGVNKLCDGCLIGKQRRTPFPSRTAYRAD 180
+WRWHAR+GH+NF AL K+ ++ LV GLP + V ++C+ CL GKQRR PFP + +RA
Sbjct: 291 AWRWHARFGHVNFTALRKMGREALVRGLPVLSQVEQVCEACLAGKQRRAPFPQQALHRAT 350
Query: 181 EPLELVHGDTCGPIKPATPGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKARAEA 240
EPL L+HGD CGP+ PATP G F LLVDD SR+MWL LL K A +A+KR++A AE
Sbjct: 351 EPLALLHGDLCGPVMPATPSGNRYFPLLVDDYSRYMWLVLLATKDAAPDAMKRVQAAAER 410
Query: 241 ECEKKMRVLRTDRGGEFTSASFSKYCDEVGIQRHLTAPYSPQQNGVVERRNQTIVGTARS 300
+ +K+R LRTDRGGEFT F++YC E+G++R LTAPYSPQQNGVVERRNQ++V TARS
Sbjct: 411 KSGRKLRALRTDRGGEFTVGHFTEYCAELGLRRELTAPYSPQQNGVVERRNQSVVSTARS 470
Query: 301 LLVTAGMPGRFWGEAVMTAVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCVAYMK 360
+L G+PG FWGEAV TAVYLLNR ++S+DGKTPYE W P VHH R FGCVA++K
Sbjct: 471 MLKAKGLPGMFWGEAVNTAVYLLNRCSSKSIDGKTPYELWNGVTPAVHHLRTFGCVAHVK 530
Query: 361 VTRPHLAKLDPRGLKVVFIGYEPGSKAYRLYDPVGGRAHVSRDVVFDESTFWQWNDVIEA 420
VT P KLD R ++F+GYE GSKAYR+YDP R HVSRDVVFDE W W D A
Sbjct: 531 VTAP-TKKLDDRSRPMIFVGYELGSKAYRVYDPATRRVHVSRDVVFDEEAQWNW-DGEAA 590
Query: 421 DRNPNQFTVEYLV-----------TEPEEGGAQHQETSPPPAGAPP-------EPVEFAT 480
+ FT+EY T E GGA SP P PVEF +
Sbjct: 591 TNVDSDFTIEYTTVYHPATATPTQTGTEHGGAPASPRSPASGSTPTTPPVAEVSPVEFVS 650
Query: 481 -PRTADSTLDADHDTDLEARYRRMDDLVGGGEPPGLAARELEEVAELHAVSADEPNTFAE 540
P + LDADHD D R+RR+DD++G PPG A REL E EL AV+A+EP +FAE
Sbjct: 651 PPPDVEDDLDADHD-DAPLRFRRIDDVLGPATPPGQAVRELSE--ELFAVTAEEPASFAE 710
Query: 541 AEKNPCWRKAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLV 600
AE+ CWR+AM EEM SI N+TW L D R IGLKWV+K K++ G + K+KARLV
Sbjct: 711 AEQLSCWRQAMIEEMRSIEANKTWRLVDPLARQRPIGLKWVYKAKKDAAGNITKYKARLV 770
Query: 601 AKGYVQKQGVDFEEVFAPVARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVR 660
AKGYVQ+QG+DF+EVFAPVARLESVR LLA AA W VHHMDVKSAFLNGEL E VYV
Sbjct: 771 AKGYVQRQGIDFDEVFAPVARLESVRLLLAHAACEGWAVHHMDVKSAFLNGELLEEVYVA 830
Query: 661 QPPGFLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDSTLLSLNFKRCASEHGMYTYGHGK 720
QPPGF+ + +KVLRL KALYGLRQAPRAW +KLD++LLSL F R SEH +Y G G+
Sbjct: 831 QPPGFVVDGQEHKVLRLDKALYGLRQAPRAWYSKLDASLLSLGFHRSDSEHAVYMRGTGE 890
Query: 721 KRLIVGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDLGVLSYYLGIEVQQNSSGISICQ 780
+RL+VGVYVDDLIITGG+ G L +FK+EM F+MSDLG+L YYLG+EV Q GI++ Q
Sbjct: 891 QRLVVGVYVDDLIITGGNPGELKQFKEEMKGTFQMSDLGLLQYYLGLEVNQTEDGITVNQ 950
Query: 781 SAYARKLLDTTGLVDSNPTRTPMEARLQLRKAGTTTTVDSTNYRSIVGSLRYLVNSRPDL 840
AYA K+L T G+V SNP+ TPME RL+L K +VD+T+YR IVGSLRYLVNSRPDL
Sbjct: 951 RAYAEKILQTAGMVASNPSLTPMETRLKLSKMSNAPSVDATDYRWIVGSLRYLVNSRPDL 1010
Query: 841 AYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVRYCAGSEKEKLKLVGYSDSDMAG 900
AYSVGYVSRFME P EHL AVKR+LRYVAG+ +G Y K+ LVGYSDSD+AG
Sbjct: 1011 AYSVGYVSRFMEKPTTEHLAAVKRVLRYVAGSIGYGCHY---KRKKDASLVGYSDSDLAG 1070
Query: 901 DVDDRKSTSGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAASMAATQGIWLARLMEEII 960
DVD RKSTSG+ +FL I WQS KQKVVALSSCEAEYIAA+ AA QG+WLARL+ E+
Sbjct: 1071 DVDTRKSTSGVFFFLGDNLITWQSQKQKVVALSSCEAEYIAATTAACQGVWLARLLAELQ 1130
Query: 961 GRESDPPMLYIDNKATISLIKNPVLHDRSKHIEIRFHYIRECADRGLIKIDFIRTEEQLG 1020
G E+D L IDN++ I L KNPV HDRSKHI+ R+HYIREC + G +K++FI T EQL
Sbjct: 1131 GEEADAVTLRIDNQSAIMLSKNPVFHDRSKHIDTRYHYIRECIEEGRVKVEFIGTNEQLA 1190
Query: 1021 DIFTKSLARVKFEELRSKIGV 1023
DI TKSL R +F ELRS+IG+
Sbjct: 1191 DILTKSLGRDRFMELRSQIGL 1203
BLAST of CmaCh01G011070 vs. NCBI nr
Match:
CAE03692.2 (OSJNBb0026E15.10 [Oryza sativa Japonica Group])
HSP 1 Score: 1330.9 bits (3443), Expect = 0.0e+00
Identity = 655/1037 (63.16%), Postives = 801/1037 (77.24%), Query Frame = 0
Query: 1 MTGARSAFSELDSGIRGTVKFGDGSVVEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANL 60
MTG+RSAF+ELD+ + GTV+FGDGSVV IEGR T+LF + GEHR + VY+IPRL AN+
Sbjct: 405 MTGSRSAFAELDTAVTGTVRFGDGSVVRIEGRVTVLFSCRFGEHRGIAGVYYIPRLTANI 464
Query: 61 VSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRLYILELEIDQPVSLSAKTEEV 120
VSLGQLD +G + I G+L + D + LL + RR+ + LY ++L+ID+PV L+A++ E
Sbjct: 465 VSLGQLDRSGSKVLIHHGILHVWDPRGHLLVRVRRSDDCLYTIKLDIDRPVCLAARSAEP 524
Query: 121 SWRWHARYGHLNFPALEKLQKKELVHGLPEIKGVNKLCDGCLIGKQRRTPFPSRTAYRAD 180
+WRWHARYGHLNFPAL KL ++E+V GLP ++ V ++CDGCL+GKQRR FP+++ YRAD
Sbjct: 525 AWRWHARYGHLNFPALRKLAQQEMVRGLPLLQQVTQVCDGCLLGKQRRAAFPTQSKYRAD 584
Query: 181 EPLELVHGDTCGPIKPATPGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKARAEA 240
E LELVHGD CGPI+PATP G FLLLVDD SR+MWLT++++K EAA A+K +ARAE
Sbjct: 585 EHLELVHGDLCGPIEPATPAGNRYFLLLVDDMSRYMWLTMIRSKDEAANAIKHFQARAEV 644
Query: 241 ECEKKMRVLRTDRGGEFTSASFSKYCDEVGIQRHLTAPYSPQQNGVVERRNQTIVGTARS 300
E +K+R LR DRG EFTS F +YC +G+ R LTAPYSPQQNGVVERRNQTIV TARS
Sbjct: 645 ESGRKLRALRMDRGSEFTSIEFGEYCANLGVGRQLTAPYSPQQNGVVERRNQTIVATARS 704
Query: 301 LLVTAGMPGRFWGEAVMTAVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCVAYMK 360
++ G+PGRFWGEA+ TAV+LLNRSPT+SLD +TPYEAWY + P VH R FGCV ++K
Sbjct: 705 MMKAKGVPGRFWGEAMSTAVFLLNRSPTKSLDNQTPYEAWYGQWPAVHFLRTFGCVGHVK 764
Query: 361 VTRPHLAKLDPRGLKVVFIGYEPGSKAYRLYDPVGGRAHVSRDVVFDESTFWQWNDVI-E 420
+T+P L KLD R +V +GYE GSKAYRLYDPV R HVSRDVVFDE W W V +
Sbjct: 765 ITKPGLKKLDDRSAPMVLLGYEQGSKAYRLYDPVSERVHVSRDVVFDEDIAWDWGPVTPD 824
Query: 421 ADRNPNQFTVEYLVT--------------EPEEGGAQHQETSPPPAGAPPEPVEFATPRT 480
FTVE +VT P T PP+ PE VEF TP T
Sbjct: 825 GAPQLEPFTVEQVVTTTIGTAPASSPTPPSPPSPAPSAPTTPAPPSPPSPEAVEFVTPPT 884
Query: 481 ADSTLDADHDTDLEARYRRMDDLVGGGEPPGLAARELEEVAELHAVSADEPNTFAEAEKN 540
DS LDAD D D+ RYR +D+L+G PPG A R LE++ ELH VSADEP + AEAE +
Sbjct: 885 QDSILDADADDDVVPRYRLVDNLLGNASPPGHAPRVLEQL-ELHVVSADEPASLAEAEAD 944
Query: 541 PCWRKAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGY 600
P WR AMQ+E+ +I +N TWSL D+P GHRAIGLKWV+KLKR+E+G +V++KARLVAKGY
Sbjct: 945 PSWRGAMQDELNAIVDNDTWSLTDLPHGHRAIGLKWVYKLKRDEQGAIVRYKARLVAKGY 1004
Query: 601 VQKQGVDFEEVFAPVARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPG 660
VQ+QGVDF+EVFA VARLESVR LLA+AAH W+VHHMDVKSAFLNGEL E VYV QPPG
Sbjct: 1005 VQRQGVDFDEVFALVARLESVRLLLAVAAHQGWQVHHMDVKSAFLNGELLEEVYVSQPPG 1064
Query: 661 FLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDSTLLSLNFKRCASEHGMYTYGHGKKRLI 720
F+D+++ NKV RLHKALYGLRQAPRAWNAKLDS+LLSL F R +SEHG+YT G +RL+
Sbjct: 1065 FVDDNHKNKVYRLHKALYGLRQAPRAWNAKLDSSLLSLGFHRSSSEHGVYTRTRGGRRLM 1124
Query: 721 VGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDLGVLSYYLGIEVQQNSSGISICQSAYA 780
VGVYVDDLIITG + FK EM K F+MSDLG L YYLGIEV Q+S GI++ Q+AYA
Sbjct: 1125 VGVYVDDLIITGDHDDEIRSFKGEMMKLFKMSDLGALRYYLGIEVTQDSDGITLGQAAYA 1184
Query: 781 RKLLDTTGLVDSNPTRTPMEARLQLRKAGTTTTVDSTNYRSIVGSLRYLVNSRPDLAYSV 840
K+L+ GL D NP +TPME RL+LRK VD+T YRS+VGSLRYLVN+RPDLA+SV
Sbjct: 1185 GKILEKAGLKDCNPCQTPMEVRLKLRKGSDFPLVDATLYRSLVGSLRYLVNTRPDLAFSV 1244
Query: 841 GYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVRYCAGSEKEKLKLVGYSDSDMAGDVDD 900
GYVSRFME+PRE+HL AV+RILRYVAGTR WG+R+ G+ LVGYSDSD+AGD D+
Sbjct: 1245 GYVSRFMESPREDHLAAVRRILRYVAGTRCWGIRFGPGARCALPMLVGYSDSDLAGDPDE 1304
Query: 901 RKSTSGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAASMAATQGIWLARLMEEIIGRES 960
RKSTSG I+F++GG + WQS+KQKVVALSSCEAEYIAA+ A QG+WLARL+ E++G E
Sbjct: 1305 RKSTSGQIFFINGGPVTWQSSKQKVVALSSCEAEYIAAAAATCQGVWLARLLAEVLGDEI 1364
Query: 961 DPPMLYIDNKATISLIKNPVLHDRSKHIEIRFHYIRECADRGLIKIDFIRTEEQLGDIFT 1020
P+L +DN++TISLIKNPV HDRSKHI++++HYIRECA++ LI++ F+ T EQLGDIFT
Sbjct: 1365 TAPLLKVDNQSTISLIKNPVHHDRSKHIDVKYHYIRECAEKKLIEMMFVGTAEQLGDIFT 1424
Query: 1021 KSLARVKFEELRSKIGV 1023
KSL R +F+ELRSKIGV
Sbjct: 1425 KSLGRTRFQELRSKIGV 1440
BLAST of CmaCh01G011070 vs. NCBI nr
Match:
CAH66352.1 (OSIGBa0135C09.3 [Oryza sativa])
HSP 1 Score: 1294.3 bits (3348), Expect = 0.0e+00
Identity = 643/1038 (61.95%), Postives = 785/1038 (75.63%), Query Frame = 0
Query: 1 MTGARSAFSELDSGIRGTVKFGDGSVVEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANL 60
MTG+RSAF++LD+ + GTV+FGDGSVV IEGRGT+LF + GEHR + VY+IPRL AN+
Sbjct: 338 MTGSRSAFAKLDTAVTGTVRFGDGSVVRIEGRGTVLFSCRFGEHRGIAGVYYIPRLTANI 397
Query: 61 VSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRLYILELEIDQPVSLSAKTEEV 120
VSLGQLD +G + I G+L++ D + LL + RR+ + LY ++L ID+PV L+A++ +
Sbjct: 398 VSLGQLDRSGSKVLIHHGVLRVWDPRGHLLVRVRRSDDCLYTIKLNIDRPVYLAARSAKP 457
Query: 121 SWRWHARYGHLNFPALEKLQKKELVHGLPEIKGVNKLCDGCLIGKQRRTPFPSRTAYRAD 180
+WRWHARYGHLNFP+L KL ++E+V GLP ++ V ++CDGCL+GKQRR FP+++ YRAD
Sbjct: 458 AWRWHARYGHLNFPSLRKLAQQEMVRGLPLLQQVTQVCDGCLLGKQRRAAFPTQSKYRAD 517
Query: 181 EPLELVHGDTCGPIKPATPGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKARAEA 240
E LELVHGD CGPI+PATP G FLLLVDD SR+MWLTL+++K EAA A+K +A AE
Sbjct: 518 EHLELVHGDLCGPIEPATPAGNRYFLLLVDDMSRYMWLTLIRSKDEAANAIKHFQAHAEV 577
Query: 241 ECEKKMRVLRTDRGGEFTSASFSKYCDEVGIQRHLTAPYSPQQNGVVERRNQTIVGTARS 300
E +K+R LRTDRGGEFTS F +YC + + R LTAPYSPQQNGVVERRNQTIV TARS
Sbjct: 578 ESGRKLRALRTDRGGEFTSIEFGEYCANLRVGRQLTAPYSPQQNGVVERRNQTIVATARS 637
Query: 301 LLVTAGMPGRFWGEAVMTAVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCVAYMK 360
++ G+PGRFWGEA+ TAV+LLNRSPT+SLD +TPYEAWY ++P VH R FGCV ++K
Sbjct: 638 MMKAKGVPGRFWGEAMSTAVFLLNRSPTKSLDNQTPYEAWYGQRPAVHFLRTFGCVGHVK 697
Query: 361 VTRPHLAKLDPRGLKVVFIGYEPGSKAYRLYDPVGGRAHVSRDVVFDESTFWQWNDVIEA 420
+T+P L KLD R +V +GYE GSKAYRLYDPV R HVSRDVVFDE W W +
Sbjct: 698 ITKPGLKKLDDRSAPMVLLGYEQGSKAYRLYDPVSERVHVSRDVVFDEDAAWDWGP-LTP 757
Query: 421 DRNP--NQFTVEYLVT--------------EPEEGGAQHQETSPPPAGAPPEPVEFATPR 480
D P FTVE +VT P T PP+ PE VEF TP
Sbjct: 758 DGAPQLEPFTVEQVVTTTIGTAPASSLTPPSPPSPAPSAPTTPAPPSPPSPEAVEFVTPP 817
Query: 481 TADSTLDADHDTDLEARYRRMDDLVGGGEPPGLAARELEEVAELHAVSADEPNTFAEAEK 540
T DS LDAD D D+ RY +D+L+G PPG A R LE++ ELH VSADEP + AEAE
Sbjct: 818 TQDSILDADADDDVVPRYHLVDNLLGNASPPGHAPRVLEQL-ELHVVSADEPASLAEAEA 877
Query: 541 NPCWRKAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKG 600
+P WR AMQ+E+ +I +N TWSL D+P GHRAIGLKW ARLVAKG
Sbjct: 878 DPNWRGAMQDELNAIVDNDTWSLTDLPHGHRAIGLKW----------------ARLVAKG 937
Query: 601 YVQKQGVDFEEVFAPVARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPP 660
YVQ+QGVDF+EVFAPVARLE VR LLAIAAH W+VHHMDVKSAFLNGEL E VYV QPP
Sbjct: 938 YVQRQGVDFDEVFAPVARLELVRLLLAIAAHQGWQVHHMDVKSAFLNGELLEEVYVSQPP 997
Query: 661 GFLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDSTLLSLNFKRCASEHGMYTYGHGKKRL 720
GF+D+++ NKV RLHKALYGLRQAPRAWN KLDS+LLSL F R +SEHG+YT G +RL
Sbjct: 998 GFVDDNHKNKVYRLHKALYGLRQAPRAWNTKLDSSLLSLGFHRSSSEHGVYTRTRGGRRL 1057
Query: 721 IVGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDLGVLSYYLGIEVQQNSSGISICQSAY 780
VGVYVDDLIITG + FK EM K F+MSDLG L YYLGIEV Q+S GI++ Q+AY
Sbjct: 1058 TVGVYVDDLIITGDHDDEIRSFKGEMMKLFKMSDLGALRYYLGIEVTQDSDGITLGQAAY 1117
Query: 781 ARKLLDTTGLVDSNPTRTPMEARLQLRKAGTTTTVDSTNYRSIVGSLRYLVNSRPDLAYS 840
A K+L+ GL D NP +TPME RL+LRK VD+T YRS+VGSLRYLVN+RPDLA+S
Sbjct: 1118 AGKILEKAGLKDCNPCQTPMEVRLKLRKGSDFPLVDATLYRSLVGSLRYLVNTRPDLAFS 1177
Query: 841 VGYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVRYCAGSEKEKLKLVGYSDSDMAGDVD 900
VGYVSRFME+PRE+HL AV+RILRYVAGTR WG+R+ G+ LVGYSDSD+AGD D
Sbjct: 1178 VGYVSRFMESPREDHLAAVRRILRYVAGTRCWGIRFGPGARCALPMLVGYSDSDLAGDPD 1237
Query: 901 DRKSTSGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAASMAATQGIWLARLMEEIIGRE 960
+RKSTSG I+F++GG + WQS+K+KVVALSSCEAEYIAA+ QG+WLARL+ E++G E
Sbjct: 1238 ERKSTSGQIFFINGGPVTWQSSKKKVVALSSCEAEYIAAAATTCQGVWLARLLAEVLGDE 1297
Query: 961 SDPPMLYIDNKATISLIKNPVLHDRSKHIEIRFHYIRECADRGLIKIDFIRTEEQLGDIF 1020
P+L +DN++TISLIKNPV HDRSKHI++++HYIRECA++ LI++ F+ T EQLGDIF
Sbjct: 1298 IAAPLLKVDNQSTISLIKNPVHHDRSKHIDVKYHYIRECAEKKLIEMMFVGTAEQLGDIF 1357
Query: 1021 TKSLARVKFEELRSKIGV 1023
TKSL R +F+ELRSKIGV
Sbjct: 1358 TKSLGRTRFQELRSKIGV 1357
BLAST of CmaCh01G011070 vs. NCBI nr
Match:
BAF23632.1 (Os08g0389500 [Oryza sativa Japonica Group])
HSP 1 Score: 1261.1 bits (3262), Expect = 0.0e+00
Identity = 628/1055 (59.53%), Postives = 778/1055 (73.74%), Query Frame = 0
Query: 1 MTGARSAFSELDSGIRGTVKFGDGSVVEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANL 60
MTG RSAFSEL++GIRGTVKFGDGSVV IEGRGT+LF K GEH+ L VY IPRL N+
Sbjct: 399 MTGTRSAFSELNTGIRGTVKFGDGSVVGIEGRGTVLFKCKDGEHQALEGVYHIPRLTTNI 458
Query: 61 VSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRLYILELEIDQPVSLSAKTEEV 120
VSLGQLDE S E G+LKI + QRRLL + R+ NRLY+++L I +PV L+A+ ++
Sbjct: 459 VSLGQLDEEKFKWSCEDGVLKIWNKQRRLLAKVVRSPNRLYVVKLNIGRPVCLAAQGGDI 518
Query: 121 SWRWHARYGHLNFPALEKLQKKELVHGLPEIKGVNKLCDGCLIGKQRRTPFPSRTAYRAD 180
+WRWHAR+GHLNF ALEKL + +V GLP I V+++CD CL+GKQRR PFPS+ YRA
Sbjct: 519 AWRWHARFGHLNFRALEKLGRAVMVRGLPLINHVDQVCDSCLVGKQRRLPFPSKAKYRAK 578
Query: 181 EPLELVHGDTCGPIKPATPGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKARAEA 240
E LELVHGD CGP+ PATP G LFLLLVDD SR+MWL LL +K +A+ A+KR A AEA
Sbjct: 579 EKLELVHGDICGPVTPATPSGNKLFLLLVDDLSRYMWLILLSSKDQASVAIKRFLACAEA 638
Query: 241 ECEKKMRVLRTDRGGEFTSASFSKYCDEVGIQRHLTAPYSPQQNGVVERRNQTIVGTARS 300
E +K+R LRTDRGGEFT+ +F++YC E GIQRHLTAPY+PQQNGVVERRNQT++G ARS
Sbjct: 639 EAGRKLRTLRTDRGGEFTAHAFAEYCAEHGIQRHLTAPYTPQQNGVVERRNQTVMGMARS 698
Query: 301 LLVTAGMPGRFWGEAVMTAVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCVAYMK 360
++ +PG FWGEAV TAV+LLNR+PT+ +DGKTP+E W+ KP VH R FGCVA++K
Sbjct: 699 MMKAKSLPGWFWGEAVNTAVFLLNRAPTQCVDGKTPFEVWHGVKPPVHFLRTFGCVAHVK 758
Query: 361 VTRPHLAKLDPRGLKVVFIGYEPGSKAYRLYDPVGGRAHVSRDVVFDESTFWQWNDVIEA 420
LAKLD R + +VF+GYE G+KAYR Y+PV R HVSRD VF+E W+W A
Sbjct: 759 NGGQRLAKLDDRSMPMVFVGYEAGTKAYRFYNPVSRRVHVSRDAVFEEERSWEWGAEKGA 818
Query: 421 --DRNPNQFTVEYLVTEPE-EGG-------AQHQETSPP--------------------- 480
D + F VE+L T P +GG A + TS P
Sbjct: 819 GPDDDIEPFVVEHLATGPTGQGGPVAATPTATQRSTSAPAPMAPPATPSQAGTPTHGAGP 878
Query: 481 --PAGAPPEPVEFATPRTADSTLDADHDTDLEARYRRMDDLVGGGEPPGLAARELEEVAE 540
PA A +EFA+P D LD DHD D+ R+R +D+L+G PPGLA RE+ E
Sbjct: 879 RTPASASSPAIEFASPPQGDLDLDNDHDDDVPLRFRTVDNLLGASSPPGLAEREVTE--G 938
Query: 541 LHAVSADEPNTFAEAEKNPCWRKAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKR 600
L DEP T EA++ WR+AM EEM SI N+TWSL ++P G RAIGLKWVFK+K+
Sbjct: 939 LMVAIEDEPATAEEAKQVKEWREAMIEEMASIEHNKTWSLVELPAGQRAIGLKWVFKIKK 998
Query: 601 NEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPVARLESVRFLLAIAAHHSWEVHHMDVKS 660
+E G + KHKARLVAKGYVQ+QG+D+EEVFAPVAR+ESVR LLA+AAH SW VHHMDVKS
Sbjct: 999 DEHGNITKHKARLVAKGYVQRQGIDYEEVFAPVARIESVRVLLAVAAHRSWSVHHMDVKS 1058
Query: 661 AFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDSTLLSLNFKR 720
AFLNG+L E VYV+QPPGF+ + KVL+LHKALYGL+QAPRAWN+KLDS+LL L F R
Sbjct: 1059 AFLNGDLAEEVYVQQPPGFVAAGHERKVLKLHKALYGLKQAPRAWNSKLDSSLLMLGFAR 1118
Query: 721 CASEHGMYTYGHGKKRLIVGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDLGVLSYYLG 780
EHG+YT G+KRL+VG+YVDDLIITGG V+ FK EM F MSDLGVLSYYLG
Sbjct: 1119 SECEHGLYTRSDGEKRLVVGIYVDDLIITGGSTEVINTFKTEMKTLFRMSDLGVLSYYLG 1178
Query: 781 IEVQQNSSGISICQSAYARKLLDTTGLVDSNPTRTPMEARLQLRKAGTTTTVDSTNYRSI 840
IEV+Q GI + Q+AYA+K+L+ G+ NP TPMEARL+L K T+ VD+T YRS+
Sbjct: 1179 IEVRQGRRGIELLQAAYAKKILEKAGMGTCNPCATPMEARLKLSKQSTSPAVDATEYRSL 1238
Query: 841 VGSLRYLVNSRPDLAYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVRYCAGSEKE 900
+GSLRYL+N+RPD+A++VGY+SRFME PR+EHL A+K +LRYVAGT D+G+ Y +G
Sbjct: 1239 IGSLRYLMNTRPDMAFAVGYLSRFMENPRQEHLAAMKHLLRYVAGTIDYGLVYTSGD--T 1298
Query: 901 KLKLVGYSDSDMAGDVDDRKSTSGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAASMAA 960
+ LVGYSDSDMAGD+DDRKSTSG+IYFL G + WQS KQ+VVALSSCEAEYIA + AA
Sbjct: 1299 EFNLVGYSDSDMAGDIDDRKSTSGIIYFLGGNPVAWQSQKQRVVALSSCEAEYIAGAAAA 1358
Query: 961 TQGIWLARLMEEIIGRESDPPMLYIDNKATISLIKNPVLHDRSKHIEIRFHYIRECADRG 1020
QG+WL RL+++++G PP L +DN++ I+L KNPVLHDRSKHI+ +FH++REC D G
Sbjct: 1359 CQGVWLRRLLQDVVGVSGPPPQLKMDNQSAIALSKNPVLHDRSKHIDTKFHFLRECVDSG 1418
Query: 1021 LIKIDFIRTEEQLGDIFTKSLARVKFEELRSKIGV 1023
+++ F+ T+ QL DI TK+L R KF+ELR IGV
Sbjct: 1419 AVRLAFVSTQAQLADIMTKALGRSKFQELRELIGV 1449
BLAST of CmaCh01G011070 vs. NCBI nr
Match:
AQA29583.1 (reverse transcriptase [Zea mays])
HSP 1 Score: 1236.9 bits (3199), Expect = 0.0e+00
Identity = 622/1065 (58.40%), Postives = 762/1065 (71.55%), Query Frame = 0
Query: 1 MTGARSAFSELDSGIRGTVKFGDGSVVEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANL 60
MTG+R FSELDSG+ GTVKFGDGSVV IEG+GT+LF + GEHR+L VY+IPRL N+
Sbjct: 575 MTGSRHVFSELDSGVTGTVKFGDGSVVNIEGKGTVLFALRSGEHRRLDGVYYIPRLMTNI 634
Query: 61 VSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRLYILELEIDQPVSLSAKTEEV 120
VSLGQ+DE G + IE G+L++ D QRRLL AK
Sbjct: 635 VSLGQMDEEGLKVVIEEGVLRLFDLQRRLL------------------------AKRGSA 694
Query: 121 SWRWHARYGHLNFPALEKLQKKELVHGLPEIKGVNKLCDGCLIGKQRRTPFPSRTAYRAD 180
+WRWH RYGHLNF AL KL+++E+V GLP I V+++C+ C++ KQ+R PFP YRA
Sbjct: 695 TWRWHERYGHLNFQALRKLEREEMVRGLPSIDRVDQVCEDCILAKQKRAPFPQAAKYRAQ 754
Query: 181 EPLELVHGDTCGPIKPATPGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKARAEA 240
E LELVHGD CGPI P TP G + FLLLVDD SRFMWLTLL++K++A + +AR E
Sbjct: 755 EELELVHGDLCGPISPPTPTGNAYFLLLVDDMSRFMWLTLLRSKADAPSTIMLFQARVER 814
Query: 241 ECEKKMRVLRTDRGGEFTSASFSKYCDEVGIQRHLTAPYSPQQNGVVERRNQTIVGTARS 300
EC KK++VLRTD GGEFTS F ++C GIQRH +APY+PQQNGVVERRNQ +V TARS
Sbjct: 815 ECGKKLKVLRTDNGGEFTSVQFGEHCAGEGIQRHFSAPYTPQQNGVVERRNQMVVSTARS 874
Query: 301 LLVTAGMPGRFWGEAVMTAVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCVAYMK 360
+L GMPG FWGEAV TAV+LLNR+PT +L+G+TPY+AWY KKP VH +VFGCVAY+K
Sbjct: 875 ILRARGMPGHFWGEAVHTAVFLLNRAPTAALNGRTPYQAWYGKKPAVHFLKVFGCVAYIK 934
Query: 361 VTRPHLAKLDPRGLKVVFIGYEPGSKAYRLYDPVGGRAHVSRDVVFDESTFWQWNDVIE- 420
RPHL+KL+ RG KVVFIGY+ GSKAYR YDPV R HVSRD VF+E W I+
Sbjct: 935 RPRPHLSKLEDRGQKVVFIGYQDGSKAYRFYDPVTERVHVSRDAVFNEGARLDWGGAIDT 994
Query: 421 ADRNPNQFTVEY------------------------LVTEPEEGGAQHQET--------- 480
D +P EY L P T
Sbjct: 995 VDMHPFTVAEEYELRHQQVEGSALEPISPEARTPAPLALSPRSASTPSTPTPHTVSPTAP 1054
Query: 481 -------SPPPAGAPPEPVEFATPRTADSTLDADHDTDLEARYRRMDDLVGGGEPPGLAA 540
SP AP ++FATP + D + DAD +L RYR +D++ G PGL
Sbjct: 1055 STSATASSPSTPQAPRTHIKFATPLSTDPSFDADDVGEL--RYRTLDNIHSVGAAPGLVH 1114
Query: 541 RELEEVAELHAVSADEPNTFAEAEKNPCWRKAMQEEMTSITENQTWSLEDMPPGHRAIGL 600
+ +E AELH VS +EP T EA+ +P W AM+EE+ SI +N+TWSL ++P GHRAIGL
Sbjct: 1115 HD-DEHAELHVVSVEEPRTLKEADGDPNWVAAMEEELASIRDNKTWSLAELPHGHRAIGL 1174
Query: 601 KWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPVARLESVRFLLAIAAHHSWE 660
KWV+K+KR+E +VK+KARLVAKGYVQ+ GVDF+EVFAPVAR ESVR LLAIAAH+ W
Sbjct: 1175 KWVYKVKRDENDNIVKYKARLVAKGYVQQPGVDFDEVFAPVARQESVRLLLAIAAHYGWG 1234
Query: 661 VHHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDST 720
VHHMDVKSAFLNGEL+E VYV+QPPGF+D + KVLRLHKALYGLRQAPRAWN KLD+
Sbjct: 1235 VHHMDVKSAFLNGELQEEVYVQQPPGFVDERHKYKVLRLHKALYGLRQAPRAWNQKLDAE 1294
Query: 721 LLSLNFKRCASEHGMYTYGHGKKRLIVGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDL 780
LL+L F RC +EHGMYT G G+ RLIVGVYVDDLIITGGD G + +FK +M K F+MSDL
Sbjct: 1295 LLALGFARCVNEHGMYTRGKGEARLIVGVYVDDLIITGGDAGAVAKFKVQMQKIFKMSDL 1354
Query: 781 GVLSYYLGIEVQQNSSGISICQSAYARKLLDTTGLVDSNPTRTPMEARLQLRKAGTTTTV 840
G+LSYYLG+EV Q + GI++ QSAYA K+L+ GL N + TPME +L+L K GTT +V
Sbjct: 1355 GLLSYYLGLEVTQGAQGITLRQSAYATKVLEKAGLAGCNASATPMEPKLKLLKEGTTPSV 1414
Query: 841 DSTNYRSIVGSLRYLVNSRPDLAYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVR 900
D T YRS++GSLRYL NSRPDLAY VGY+SRFMEAPR+EHL AVKR+LRYVAGT WG+
Sbjct: 1415 DVTEYRSLIGSLRYLCNSRPDLAYPVGYLSRFMEAPRQEHLAAVKRVLRYVAGTLHWGLH 1474
Query: 901 Y-CAGSEKEKLKLVGYSDSDMAGDVDDRKSTSGMIYFLSGGAICWQSTKQKVVALSSCEA 960
Y +G + +L+GYSDSD+AGDV+DRKSTSG+I+FL+GG + WQS KQKVVALSSCEA
Sbjct: 1475 YHPSGKNEGAPQLLGYSDSDLAGDVNDRKSTSGLIFFLAGGPVAWQSAKQKVVALSSCEA 1534
Query: 961 EYIAASMAATQGIWLARLMEEIIGRESDPPMLYIDNKATISLIKNPVLHDRSKHIEIRFH 1020
EYIAA+ AA + +WLARL+ E+IG P L +DNK+ I+L+KNPV HDRSKHI+++FH
Sbjct: 1535 EYIAAAAAACEAVWLARLLAELIGGAVLAPKLKVDNKSAIALMKNPVHHDRSKHIDVKFH 1594
Query: 1021 YIRECADRGLIKIDFIRTEEQLGDIFTKSLARVKFEELRSKIGVQ 1024
+IREC DR LI ++F+ TE QLGDI TK+L R + ELR I ++
Sbjct: 1595 FIRECCDRKLIDVEFVGTELQLGDILTKALGRTRLHELRGLIDMK 1612
BLAST of CmaCh01G011070 vs. NCBI nr
Match:
BAF21410.1 (Os07g0434200, partial [Oryza sativa Japonica Group])
HSP 1 Score: 1212.2 bits (3135), Expect = 0.0e+00
Identity = 614/1041 (58.98%), Postives = 750/1041 (72.05%), Query Frame = 0
Query: 1 MTGARSAFSELDSGIRGTVKFGDGSVVEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANL 60
MTG+R+AFS++D+ + G V+ GDGS+V I GR TILF K GEH L Y++P L AN+
Sbjct: 171 MTGSRAAFSDIDTNVTGNVRLGDGSLVRIGGRRTILFACKNGEHHMLHKAYYLPCLAANI 230
Query: 61 VSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRLYILELEIDQPVSLSAKTEEV 120
+S+GQLDETG + +E G++++ D Q RLL + RT RLY+L++ + +PV L A+ E
Sbjct: 231 ISVGQLDETGFKVLVEDGVMRVWDEQHRLLARITRTPGRLYVLDINLARPVYLMARAGED 290
Query: 121 SWRWHARYGHLNFPALEKLQKKELVHGLPEIKGVNKLCDGCLIGKQRRTPFPSRTAYRAD 180
+WRWHAR+GH+NF AL K+ ++ LV GLP + V ++C+ CL GKQRR PFP + +RA
Sbjct: 291 AWRWHARFGHVNFTALRKMGREALVRGLPVLSQVEQVCEACLAGKQRRAPFPQQALHRAT 350
Query: 181 EPLELVHGDTCGPIKPATPGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKARAEA 240
EPL L+HGD CGP+ PATP G F LLVDD SR+MWL LL K A +A+KR++A AE
Sbjct: 351 EPLALLHGDLCGPVMPATPSGNRYFPLLVDDYSRYMWLVLLATKDAAPDAMKRVQAAAER 410
Query: 241 ECEKKMRVLRTDRGGEFTSASFSKYCDEVGIQRHLTAPYSPQQNGVVERRNQTIVGTARS 300
+ +K+R LRTDRGGEFT F++YC E+G++R LTAPYSPQQNGVVERRNQ++V TARS
Sbjct: 411 KSGRKLRALRTDRGGEFTVGHFTEYCAELGLRRELTAPYSPQQNGVVERRNQSVVSTARS 470
Query: 301 LLVTAGMPGRFWGEAVMTAVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCVAYMK 360
+L G+PG FWGEAV TAVYLLNR ++S+DGKTPYE W P VHH R FGCVA++K
Sbjct: 471 MLKAKGLPGMFWGEAVNTAVYLLNRCSSKSIDGKTPYELWNGVTPAVHHLRTFGCVAHVK 530
Query: 361 VTRPHLAKLDPRGLKVVFIGYEPGSKAYRLYDPVGGRAHVSRDVVFDESTFWQWNDVIEA 420
VT P KLD R ++F+GYE GSKAYR+YDP R HVSRDVVFDE W W D A
Sbjct: 531 VTAP-TKKLDDRSRPMIFVGYELGSKAYRVYDPATRRVHVSRDVVFDEEAQWNW-DGEAA 590
Query: 421 DRNPNQFTVEYLV-----------TEPEEGGAQHQETSPPPAGAPP-------EPVEFAT 480
+ FT+EY T E GGA SP P PVEF +
Sbjct: 591 TNVDSDFTIEYTTVYHPATATPTQTGTEHGGAPASPRSPASGSTPTTPPVAEVSPVEFVS 650
Query: 481 -PRTADSTLDADHDTDLEARYRRMDDLVGGGEPPGLAARELEEVAELHAVSADEPNTFAE 540
P + LDADHD D R+RR+DD++G PPG A REL E EL AV+A+EP +FAE
Sbjct: 651 PPPDVEDDLDADHD-DAPLRFRRIDDVLGPATPPGQAVRELSE--ELFAVTAEEPASFAE 710
Query: 541 AEKNPCWRKAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLV 600
AE+ CWR+AM EEM SI N+TW L D R IGLKWV+K K++ G + K+KARLV
Sbjct: 711 AEQLSCWRQAMIEEMRSIEANKTWRLVDPLARQRPIGLKWVYKAKKDAAGNITKYKARLV 770
Query: 601 AKGYVQKQGVDFEEVFAPVARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVR 660
AKGYVQ+QG+DF+EVFAPVARLESVR LLA AA W VHHMDVKSAFLNGEL E VYV
Sbjct: 771 AKGYVQRQGIDFDEVFAPVARLESVRLLLAHAACEGWAVHHMDVKSAFLNGELLEEVYVA 830
Query: 661 QPPGFLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDSTLLSLNFKRCASEHGMYTYGHGK 720
QPPGF+ + +KVLRL KALYGLRQAPRAW +KLD++LLSL F R SEH +Y G G+
Sbjct: 831 QPPGFVVDGQEHKVLRLDKALYGLRQAPRAWYSKLDASLLSLGFHRSDSEHAVYMRGTGE 890
Query: 721 KRLIVGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDLGVLSYYLGIEVQQNSSGISICQ 780
+RL+VGVYVDDLIITGG+ G L +FK+EM F+MSDLG+L YYLG+EV Q GI++ Q
Sbjct: 891 QRLVVGVYVDDLIITGGNPGELKQFKEEMKGTFQMSDLGLLQYYLGLEVNQTEDGITVNQ 950
Query: 781 SAYARKLLDTTGLVDSNPTRTPMEARLQLRKAGTTTTVDSTNYRSIVGSLRYLVNSRPDL 840
AYA K+L T G+V SNP+ TPME RL+L K +VD+T+YR IVGSLRYLVNSRPDL
Sbjct: 951 RAYAEKILQTAGMVASNPSLTPMETRLKLSKMSNAPSVDATDYRWIVGSLRYLVNSRPDL 1010
Query: 841 AYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVRYCAGSEKEKLKLVGYSDSDMAG 900
AYSVGYVSRFME P EHL AVKR+LRYVAG+ +G Y K+ LVGYSDSD+AG
Sbjct: 1011 AYSVGYVSRFMEKPTTEHLAAVKRVLRYVAGSIGYGCHY---KRKKDASLVGYSDSDLAG 1070
Query: 901 DVDDRKSTSGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAASMAATQGIWLARLMEEII 960
DVD RKSTSG+ +FL I WQS KQKVVALSSCEAEYIAA+ AA QG+WLARL+ E+
Sbjct: 1071 DVDTRKSTSGVFFFLGDNLITWQSQKQKVVALSSCEAEYIAATTAACQGVWLARLLAELQ 1130
Query: 961 GRESDPPMLYIDNKATISLIKNPVLHDRSKHIEIRFHYIRECADRGLIKIDFIRTEEQLG 1020
G E+D L IDN++ I L KNPV HDRSKHI+ R+HYIREC + G +K++FI T EQL
Sbjct: 1131 GEEADAVTLRIDNQSAIMLSKNPVFHDRSKHIDTRYHYIRECIEEGRVKVEFIGTNEQLA 1190
Query: 1021 DIFTKSLARVKFEELRSKIGV 1023
DI TKSL R +F ELRS+IG+
Sbjct: 1191 DILTKSLGRDRFMELRSQIGL 1203
BLAST of CmaCh01G011070 vs. TAIR 10
Match:
AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )
HSP 1 Score: 364.4 bits (934), Expect = 3.2e-100
Identity = 197/504 (39.09%), Postives = 300/504 (59.52%), Query Frame = 0
Query: 513 ADEPNTFAEAEKNPCWRKAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGE 572
A EP+T+ EA++ W AM +E+ ++ TW + +PP + IG KWV+K+K N G
Sbjct: 83 AKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGT 142
Query: 573 VVKHKARLVAKGYVQKQGVDFEEVFAPVARLESVRFLLAIAAHHSWEVHHMDVKSAFLNG 632
+ ++KARLVAKGY Q++G+DF E F+PV +L SV+ +LAI+A +++ +H +D+ +AFLNG
Sbjct: 143 IERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNG 202
Query: 633 ELKETVYVRQPPGFL----DNDNPNKVLRLHKALYGLRQAPRAWNAKLDSTLLSLNFKRC 692
+L E +Y++ PPG+ D+ PN V L K++YGL+QA R W K TL+ F +
Sbjct: 203 DLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQS 262
Query: 693 ASEHGMYTYGHGKKRLIVGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDLGVLSYYLGI 752
S+H + L V VYVDD+II + + K ++ F++ DLG L Y+LG+
Sbjct: 263 HSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGL 322
Query: 753 EVQQNSSGISICQSAYARKLLDTTGLVDSNPTRTPMEARLQLRKAGTTTTVDSTNYRSIV 812
E+ ++++GI+ICQ YA LLD TGL+ P+ PM+ + VD+ YR ++
Sbjct: 323 EIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLI 382
Query: 813 GSLRYLVNSRPDLAYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVRYCAGSEKEK 872
G L YL +R D++++V +S+F EAPR H AV +IL Y+ GT G+ Y S + +
Sbjct: 383 GRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFY---SSQAE 442
Query: 873 LKLVGYSDSDMAGDVDDRKSTSGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAASMAAT 932
++L +SD+ D R+ST+G FL I W+S KQ+VV+ SS EAEY A S A
Sbjct: 443 MQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATD 502
Query: 933 QGIWLARLMEEIIGRESDPPMLYIDNKATISLIKNPVLHDRSKHIEIRFHYIRE-CADRG 992
+ +WLA+ E+ S P +L+ DN A I + N V H+R+KHIE H +RE +
Sbjct: 503 EMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQA 562
Query: 993 LIKIDFIRTEEQLGDIFTKSLARV 1012
+ F +EQ D FT+ L+ +
Sbjct: 563 TLSYSFQAYDEQ--DGFTEYLSPI 581
BLAST of CmaCh01G011070 vs. TAIR 10
Match:
ATMG00810.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 151.0 bits (380), Expect = 5.6e-36
Identity = 81/225 (36.00%), Postives = 128/225 (56.89%), Query Frame = 0
Query: 708 VYVDDLIITGGDVGVLGRFKKEMSKNFEMSDLGVLSYYLGIEVQQNSSGISICQSAYARK 767
+YVDD+++TG +L ++S F M DLG + Y+LGI+++ + SG+ + Q+ YA +
Sbjct: 5 LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64
Query: 768 LLDTTGLVDSNPTRTPMEARLQLRKAGTTTTVDSTNYRSIVGSLRYLVNSRPDLAYSVGY 827
+L+ G++D P TP+ +L T D +++RSIVG+L+YL +RPD++Y+V
Sbjct: 65 ILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNI 124
Query: 828 VSRFMEAPREEHLVAVKRILRYVAGTRDWGVRYCAGSEKEKLKLVGYSDSDMAGDVDDRK 887
V + M P +KR+LRYV GT G+ + KL + + DSD AG R+
Sbjct: 125 VCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYI---HKNSKLNVQAFCDSDWAGCTSTRR 184
Query: 888 STSGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAASMAATQGIW 933
ST+G FL I W + +Q V+ SS E EY A ++ A + W
Sbjct: 185 STTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
BLAST of CmaCh01G011070 vs. TAIR 10
Match:
ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )
HSP 1 Score: 87.4 bits (215), Expect = 7.6e-17
Identity = 42/99 (42.42%), Postives = 64/99 (64.65%), Query Frame = 0
Query: 515 EPNTFAEAEKNPCWRKAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVV 574
EP + A K+P W +AMQEE+ +++ N+TW L P +G KWVFK K + G +
Sbjct: 27 EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86
Query: 575 KHKARLVAKGYVQKQGVDFEEVFAPVARLESVRFLLAIA 614
+ KARLVAKG+ Q++G+ F E ++PV R ++R +L +A
Sbjct: 87 RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125
BLAST of CmaCh01G011070 vs. TAIR 10
Match:
ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 68.9 bits (167), Expect = 2.8e-11
Identity = 36/95 (37.89%), Postives = 52/95 (54.74%), Query Frame = 0
Query: 291 NQTIVGTARSLLVTAGMPGRFWGEAVMTAVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHF 350
N+TI+ RS+L G+P F +A TAV+++N+ P+ +++ P E W+ PT +
Sbjct: 2 NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61
Query: 351 RVFGCVAYMKVTRPHLAKLDPRGLKVVFIGYEPGS 386
R FGCVAY+ KL PR K G E GS
Sbjct: 62 RRFGCVAYIHCDE---GKLKPRAKK----GEEKGS 89
BLAST of CmaCh01G011070 vs. TAIR 10
Match:
ATMG00240.1 (Gag-Pol-related retrotransposon family protein )
HSP 1 Score: 58.2 bits (139), Expect = 5.0e-08
Identity = 32/79 (40.51%), Postives = 47/79 (59.49%), Query Frame = 0
Query: 813 YLVNSRPDLAYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVRYCAGSEKEKLKLV 872
YL +RPDL ++V +S+F A R + AV ++L YV GT G+ Y A S+ L+L
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSD---LQLK 61
Query: 873 GYSDSDMAGDVDDRKSTSG 892
++DSD A D R+S +G
Sbjct: 62 AFADSDWASCPDTRRSVTG 77
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P10978 | 3.2e-185 | 38.17 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
P04146 | 6.5e-154 | 31.63 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
Q94HW2 | 2.3e-151 | 31.72 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 1.9e-145 | 30.95 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
P25600 | 6.0e-51 | 37.38 | Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... | [more] |
Match Name | E-value | Identity | Description | |
Q7XPB1 | 0.0e+00 | 63.16 | OSJNBb0026E15.10 protein OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBb0026E... | [more] |
A0B9X7 | 0.0e+00 | 61.95 | OSIGBa0135C09.3 protein OS=Oryza sativa OX=4530 GN=OSIGBa0135C09.3 PE=4 SV=1 | [more] |
Q0J5Y3 | 0.0e+00 | 59.53 | Os08g0389500 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0389500 PE... | [more] |
A0A1P8YYM3 | 0.0e+00 | 58.40 | Reverse transcriptase OS=Zea mays OX=4577 GN=FGENESH_28 PE=4 SV=1 | [more] |
Q0D6W3 | 0.0e+00 | 58.98 | Os07g0434200 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os07... | [more] |
Match Name | E-value | Identity | Description | |
AT4G23160.1 | 3.2e-100 | 39.09 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | [more] |
ATMG00810.1 | 5.6e-36 | 36.00 | DNA/RNA polymerases superfamily protein | [more] |
ATMG00820.1 | 7.6e-17 | 42.42 | Reverse transcriptase (RNA-dependent DNA polymerase) | [more] |
ATMG00710.1 | 2.8e-11 | 37.89 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |
ATMG00240.1 | 5.0e-08 | 40.51 | Gag-Pol-related retrotransposon family protein | [more] |