CmaCh01G011070 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh01G011070
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionTransposon Ty1-H Gag-Pol polyprotein
LocationCma_Chr01: 8115984 .. 8119610 (-)
RNA-Seq ExpressionCmaCh01G011070
SyntenyCmaCh01G011070
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCGGGGCTAGATCTGCGTTCTCCGAGCTCGACTCGGGGATCCGTGGGACGGTGAAATTCGGCGACGGCTCCGTCGTCGAGATCGAAGGGCGCGGCACCATCCTGTTCGTCAGTAAGGGAGGCGAGCATCGCAAGCTGACCGACGTCTACTTCATCCCGAGGCTCAAGGCTAACCTTGTGAGCCTGGGTCAGCTCGATGAGACAGGCTGCTTCATTTCCATCGAGCGCGGACTACTGAAAATCTGCGATAATCAACGACGGCTGCTCACGCAGGCAAGACGAACCACAAACCGTCTTTACATCCTGGAGTTAGAGATAGACCAACCCGTTAGCCTCTCGGCCAAGACCGAAGAGGTATCTTGGAGGTGGCACGCAAGGTACGGACACTTAAACTTTCCTGCCCTAGAAAAGTTACAGAAGAAGGAGTTGGTGCACGGCTTGCCAGAAATCAAAGGCGTGAACAAGCTGTGCGACGGGTGCCTCATCGGCAAACAGAGGCGCACACCCTTTCCGTCTCGAACAGCCTACCGAGCCGATGAGCCATTGGAGCTTGTACACGGCGATACTTGCGGGCCCATCAAGCCGGCGACCCCAGGCGGTAAGAGTCTCTTCCTCCTGTTAGTCGATGACAAAAGCCGCTTCATGTGGCTGACTTTGCTGCAAGCGAAAAGTGAGGCGGCAGAGGCGGTTAAGCGCATTAAAGCGCGAGCGGAGGCCGAATGTGAGAAGAAGATGCGAGTGCTGCGCACAGACCGTGGCGGAGAATTCACCTCGGCAAGTTTCAGTAAGTACTGCGATGAGGTCGGCATACAACGGCACCTAACGGCGCCCTACTCCCCCCAACAGAACGGAGTGGTAGAGCGCCGAAATCAGACCATTGTCGGGACAGCGAGGTCATTGTTGGTGACGGCCGGGATGCCTGGGAGATTCTGGGGAGAGGCAGTAATGACGGCTGTCTATCTCCTCAATCGGTCACCAACCCGAAGCCTCGACGGGAAGACGCCATATGAAGCCTGGTACAACAAAAAACCAACAGTACATCATTTTCGCGTGTTCGGCTGCGTCGCATACATGAAGGTAACACGTCCCCATCTCGCCAAGCTCGATCCCAGGGGGCTGAAGGTCGTCTTCATCGGCTACGAACCCGGGAGCAAGGCGTACAGACTCTATGATCCTGTGGGGGGGCGAGCTCACGTGTCTCGCGACGTCGTCTTCGACGAAAGCACCTTCTGGCAGTGGAATGACGTGATCGAGGCAGACCGTAATCCAAATCAATTCACGGTGGAGTACCTCGTCACTGAGCCTGAAGAAGGAGGAGCCCAGCATCAGGAGACGTCACCGCCGCCAGCAGGTGCACCACCTGAACCAGTGGAATTCGCAACACCACGGACTGCGGATTCGACGCTGGATGCCGATCACGATACTGATCTGGAGGCTAGGTACCGGAGGATGGATGACCTAGTGGGAGGAGGTGAACCACCTGGACTAGCAGCGCGCGAGCTCGAGGAAGTGGCCGAACTACATGCCGTCAGTGCAGATGAACCAAACACCTTCGCCGAAGCAGAAAAGAACCCGTGCTGGCGGAAGGCAATGCAGGAGGAGATGACATCCATCACTGAGAACCAGACGTGGAGTCTGGAGGATATGCCACCGGGACACCGAGCCATAGGGCTCAAATGGGTCTTCAAACTGAAGCGCAACGAAAAAGGAGAAGTTGTGAAGCACAAGGCTCGTCTGGTGGCGAAGGGCTACGTCCAGAAGCAAGGAGTGGATTTCGAAGAGGTATTTGCGCCAGTAGCAAGGTTAGAATCCGTTCGTTTCCTGCTGGCAATTGCAGCACATCACTCTTGGGAGGTTCACCATATGGACGTAAAGTCTGCTTTCCTTAACGGAGAGTTGAAGGAGACCGTCTATGTTCGACAACCACCTGGCTTCCTGGATAACGACAACCCTAATAAGGTACTGCGCCTGCACAAAGCACTCTACGGGCTTCGACAAGCCCCACGAGCCTGGAACGCGAAGCTCGACAGTACCCTACTGTCACTGAATTTCAAACGTTGTGCCTCTGAGCATGGCATGTACACGTACGGCCACGGCAAAAAGCGACTGATCGTGGGAGTGTACGTCGACGACCTCATAATCACTGGAGGCGACGTGGGAGTCCTCGGAAGGTTCAAGAAGGAGATGTCGAAAAACTTCGAGATGAGCGATCTCGGTGTGCTCAGCTACTACCTCGGCATCGAAGTGCAACAGAACTCTTCCGGCATCTCCATCTGCCAAAGTGCATACGCGAGAAAGCTGCTGGACACAACTGGGCTTGTGGACAGTAATCCTACCAGGACGCCAATGGAGGCCCGACTTCAACTAAGGAAGGCCGGCACTACGACGACAGTCGACTCCACCAATTACCGCAGCATTGTCGGGAGTCTGCGCTATCTGGTAAACTCTCGTCCTGATCTTGCTTATTCTGTTGGATATGTGAGTAGGTTTATGGAAGCACCTAGGGAGGAGCATCTAGTGGCTGTCAAGCGCATCCTGCGCTATGTAGCCGGAACCAGAGACTGGGGCGTAAGATACTGCGCTGGGAGCGAAAAGGAGAAACTCAAACTGGTCGGCTACAGCGATAGTGATATGGCCGGTGACGTTGATGATCGTAAGAGCACCAGCGGAATGATCTACTTTCTCTCAGGCGGCGCGATCTGCTGGCAATCAACAAAACAGAAGGTAGTTGCTTTGTCTTCCTGCGAAGCAGAATACATCGCCGCTTCGATGGCAGCAACTCAAGGGATCTGGCTTGCACGACTAATGGAAGAAATCATCGGGAGAGAAAGCGATCCACCAATGCTATACATAGACAACAAAGCTACGATCTCCCTGATCAAAAATCCAGTTTTGCACGACCGGAGCAAGCACATAGAAATCAGATTCCACTACATTCGAGAATGTGCAGATCGAGGGCTCATCAAAATTGATTTCATCCGAACAGAGGAACAACTTGGAGACATTTTCACCAAATCCCTGGCGCGGGTGAAATTTGAAGAACTACGCTCAAAGATCGGAGTTCAAATAATAAGGTACAGCTTTTAGGAGGAGATTGTTAAATAAAAGCTCTGCCTTATTTAGTTAGGTTTGTAAAAAACATATGAGTTCACGCGAATGGAGGAGCGTGATTCTAGGGGCCATTGTTTTGGCAGAGTGGCGGAGTCTTCGTCCACTTATTCTATTTGTGTATATTTGGTTTTTCTATTTTTGTAATTAGATTTATTATTTAAACCATTCAACGGATGTAAAATAAAAAATATCGAGTCTTCAGCATTACCAGCGAATCTCTCTCTCTCTCTCTCCTTTTACTTCCGCTAATTTTTCCTTCGAAGAAACCTTCGGCCAATTTTTTCCGTCGACATCCGATTTGCCAGAGTCAACAGTCACTGGGTTTTTTGTGCTTCATGGGGTTTGTGTGGTGGTGGAATTTTGGGTGAAGATGGCGTTGGGAGAAAATTGGCGGCTTCATTGGGCGGTTGCCGGGCCGTTGACGTTGGCGTTTGTGGTGATCACCGCCGCGTGGTTGTTCTTTCCGCCGCTGTTGAAGACTGGCGTGGTGGCTGCAGTTATTGGGGAATGTAA

mRNA sequence

ATGACCGGGGCTAGATCTGCGTTCTCCGAGCTCGACTCGGGGATCCGTGGGACGGTGAAATTCGGCGACGGCTCCGTCGTCGAGATCGAAGGGCGCGGCACCATCCTGTTCGTCAGTAAGGGAGGCGAGCATCGCAAGCTGACCGACGTCTACTTCATCCCGAGGCTCAAGGCTAACCTTGTGAGCCTGGGTCAGCTCGATGAGACAGGCTGCTTCATTTCCATCGAGCGCGGACTACTGAAAATCTGCGATAATCAACGACGGCTGCTCACGCAGGCAAGACGAACCACAAACCGTCTTTACATCCTGGAGTTAGAGATAGACCAACCCGTTAGCCTCTCGGCCAAGACCGAAGAGGTATCTTGGAGGTGGCACGCAAGGTACGGACACTTAAACTTTCCTGCCCTAGAAAAGTTACAGAAGAAGGAGTTGGTGCACGGCTTGCCAGAAATCAAAGGCGTGAACAAGCTGTGCGACGGGTGCCTCATCGGCAAACAGAGGCGCACACCCTTTCCGTCTCGAACAGCCTACCGAGCCGATGAGCCATTGGAGCTTGTACACGGCGATACTTGCGGGCCCATCAAGCCGGCGACCCCAGGCGGTAAGAGTCTCTTCCTCCTGTTAGTCGATGACAAAAGCCGCTTCATGTGGCTGACTTTGCTGCAAGCGAAAAGTGAGGCGGCAGAGGCGGTTAAGCGCATTAAAGCGCGAGCGGAGGCCGAATGTGAGAAGAAGATGCGAGTGCTGCGCACAGACCGTGGCGGAGAATTCACCTCGGCAAGTTTCAGTAAGTACTGCGATGAGGTCGGCATACAACGGCACCTAACGGCGCCCTACTCCCCCCAACAGAACGGAGTGGTAGAGCGCCGAAATCAGACCATTGTCGGGACAGCGAGGTCATTGTTGGTGACGGCCGGGATGCCTGGGAGATTCTGGGGAGAGGCAGTAATGACGGCTGTCTATCTCCTCAATCGGTCACCAACCCGAAGCCTCGACGGGAAGACGCCATATGAAGCCTGGTACAACAAAAAACCAACAGTACATCATTTTCGCGTGTTCGGCTGCGTCGCATACATGAAGGTAACACGTCCCCATCTCGCCAAGCTCGATCCCAGGGGGCTGAAGGTCGTCTTCATCGGCTACGAACCCGGGAGCAAGGCGTACAGACTCTATGATCCTGTGGGGGGGCGAGCTCACGTGTCTCGCGACGTCGTCTTCGACGAAAGCACCTTCTGGCAGTGGAATGACGTGATCGAGGCAGACCGTAATCCAAATCAATTCACGGTGGAGTACCTCGTCACTGAGCCTGAAGAAGGAGGAGCCCAGCATCAGGAGACGTCACCGCCGCCAGCAGGTGCACCACCTGAACCAGTGGAATTCGCAACACCACGGACTGCGGATTCGACGCTGGATGCCGATCACGATACTGATCTGGAGGCTAGGTACCGGAGGATGGATGACCTAGTGGGAGGAGGTGAACCACCTGGACTAGCAGCGCGCGAGCTCGAGGAAGTGGCCGAACTACATGCCGTCAGTGCAGATGAACCAAACACCTTCGCCGAAGCAGAAAAGAACCCGTGCTGGCGGAAGGCAATGCAGGAGGAGATGACATCCATCACTGAGAACCAGACGTGGAGTCTGGAGGATATGCCACCGGGACACCGAGCCATAGGGCTCAAATGGGTCTTCAAACTGAAGCGCAACGAAAAAGGAGAAGTTGTGAAGCACAAGGCTCGTCTGGTGGCGAAGGGCTACGTCCAGAAGCAAGGAGTGGATTTCGAAGAGGTATTTGCGCCAGTAGCAAGGTTAGAATCCGTTCGTTTCCTGCTGGCAATTGCAGCACATCACTCTTGGGAGGTTCACCATATGGACGTAAAGTCTGCTTTCCTTAACGGAGAGTTGAAGGAGACCGTCTATGTTCGACAACCACCTGGCTTCCTGGATAACGACAACCCTAATAAGGTACTGCGCCTGCACAAAGCACTCTACGGGCTTCGACAAGCCCCACGAGCCTGGAACGCGAAGCTCGACAGTACCCTACTGTCACTGAATTTCAAACGTTGTGCCTCTGAGCATGGCATGTACACGTACGGCCACGGCAAAAAGCGACTGATCGTGGGAGTGTACGTCGACGACCTCATAATCACTGGAGGCGACGTGGGAGTCCTCGGAAGGTTCAAGAAGGAGATGTCGAAAAACTTCGAGATGAGCGATCTCGGTGTGCTCAGCTACTACCTCGGCATCGAAGTGCAACAGAACTCTTCCGGCATCTCCATCTGCCAAAGTGCATACGCGAGAAAGCTGCTGGACACAACTGGGCTTGTGGACAGTAATCCTACCAGGACGCCAATGGAGGCCCGACTTCAACTAAGGAAGGCCGGCACTACGACGACAGTCGACTCCACCAATTACCGCAGCATTGTCGGGAGTCTGCGCTATCTGGTAAACTCTCGTCCTGATCTTGCTTATTCTGTTGGATATGTGAGTAGGTTTATGGAAGCACCTAGGGAGGAGCATCTAGTGGCTGTCAAGCGCATCCTGCGCTATGTAGCCGGAACCAGAGACTGGGGCGTAAGATACTGCGCTGGGAGCGAAAAGGAGAAACTCAAACTGGTCGGCTACAGCGATAGTGATATGGCCGGTGACGTTGATGATCGTAAGAGCACCAGCGGAATGATCTACTTTCTCTCAGGCGGCGCGATCTGCTGGCAATCAACAAAACAGAAGGTAGTTGCTTTGTCTTCCTGCGAAGCAGAATACATCGCCGCTTCGATGGCAGCAACTCAAGGGATCTGGCTTGCACGACTAATGGAAGAAATCATCGGGAGAGAAAGCGATCCACCAATGCTATACATAGACAACAAAGCTACGATCTCCCTGATCAAAAATCCAGTTTTGCACGACCGGAGCAAGCACATAGAAATCAGATTCCACTACATTCGAGAATGTGCAGATCGAGGGCTCATCAAAATTGATTTCATCCGAACAGAGGAACAACTTGGAGACATTTTCACCAAATCCCTGGCGCGGGTGAAATTTGAAGAACTACGCTCAAAGATCGGAGTTCAAATAATAAGAGTCAACAGTCACTGGGTTTTTTGTGCTTCATGGGGTTTGTGTGGTGGTGGAATTTTGGGTGAAGATGGCGTTGGGAGAAAATTGGCGGCTTCATTGGGCGGTTGCCGGGCCGTTGACGTTGGCGTTTGTGGTGATCACCGCCGCGTGGTTGTTCTTTCCGCCGCTGTTGAAGACTGGCGTGGTGGCTGCAGTTATTGGGGAATGTAA

Coding sequence (CDS)

ATGACCGGGGCTAGATCTGCGTTCTCCGAGCTCGACTCGGGGATCCGTGGGACGGTGAAATTCGGCGACGGCTCCGTCGTCGAGATCGAAGGGCGCGGCACCATCCTGTTCGTCAGTAAGGGAGGCGAGCATCGCAAGCTGACCGACGTCTACTTCATCCCGAGGCTCAAGGCTAACCTTGTGAGCCTGGGTCAGCTCGATGAGACAGGCTGCTTCATTTCCATCGAGCGCGGACTACTGAAAATCTGCGATAATCAACGACGGCTGCTCACGCAGGCAAGACGAACCACAAACCGTCTTTACATCCTGGAGTTAGAGATAGACCAACCCGTTAGCCTCTCGGCCAAGACCGAAGAGGTATCTTGGAGGTGGCACGCAAGGTACGGACACTTAAACTTTCCTGCCCTAGAAAAGTTACAGAAGAAGGAGTTGGTGCACGGCTTGCCAGAAATCAAAGGCGTGAACAAGCTGTGCGACGGGTGCCTCATCGGCAAACAGAGGCGCACACCCTTTCCGTCTCGAACAGCCTACCGAGCCGATGAGCCATTGGAGCTTGTACACGGCGATACTTGCGGGCCCATCAAGCCGGCGACCCCAGGCGGTAAGAGTCTCTTCCTCCTGTTAGTCGATGACAAAAGCCGCTTCATGTGGCTGACTTTGCTGCAAGCGAAAAGTGAGGCGGCAGAGGCGGTTAAGCGCATTAAAGCGCGAGCGGAGGCCGAATGTGAGAAGAAGATGCGAGTGCTGCGCACAGACCGTGGCGGAGAATTCACCTCGGCAAGTTTCAGTAAGTACTGCGATGAGGTCGGCATACAACGGCACCTAACGGCGCCCTACTCCCCCCAACAGAACGGAGTGGTAGAGCGCCGAAATCAGACCATTGTCGGGACAGCGAGGTCATTGTTGGTGACGGCCGGGATGCCTGGGAGATTCTGGGGAGAGGCAGTAATGACGGCTGTCTATCTCCTCAATCGGTCACCAACCCGAAGCCTCGACGGGAAGACGCCATATGAAGCCTGGTACAACAAAAAACCAACAGTACATCATTTTCGCGTGTTCGGCTGCGTCGCATACATGAAGGTAACACGTCCCCATCTCGCCAAGCTCGATCCCAGGGGGCTGAAGGTCGTCTTCATCGGCTACGAACCCGGGAGCAAGGCGTACAGACTCTATGATCCTGTGGGGGGGCGAGCTCACGTGTCTCGCGACGTCGTCTTCGACGAAAGCACCTTCTGGCAGTGGAATGACGTGATCGAGGCAGACCGTAATCCAAATCAATTCACGGTGGAGTACCTCGTCACTGAGCCTGAAGAAGGAGGAGCCCAGCATCAGGAGACGTCACCGCCGCCAGCAGGTGCACCACCTGAACCAGTGGAATTCGCAACACCACGGACTGCGGATTCGACGCTGGATGCCGATCACGATACTGATCTGGAGGCTAGGTACCGGAGGATGGATGACCTAGTGGGAGGAGGTGAACCACCTGGACTAGCAGCGCGCGAGCTCGAGGAAGTGGCCGAACTACATGCCGTCAGTGCAGATGAACCAAACACCTTCGCCGAAGCAGAAAAGAACCCGTGCTGGCGGAAGGCAATGCAGGAGGAGATGACATCCATCACTGAGAACCAGACGTGGAGTCTGGAGGATATGCCACCGGGACACCGAGCCATAGGGCTCAAATGGGTCTTCAAACTGAAGCGCAACGAAAAAGGAGAAGTTGTGAAGCACAAGGCTCGTCTGGTGGCGAAGGGCTACGTCCAGAAGCAAGGAGTGGATTTCGAAGAGGTATTTGCGCCAGTAGCAAGGTTAGAATCCGTTCGTTTCCTGCTGGCAATTGCAGCACATCACTCTTGGGAGGTTCACCATATGGACGTAAAGTCTGCTTTCCTTAACGGAGAGTTGAAGGAGACCGTCTATGTTCGACAACCACCTGGCTTCCTGGATAACGACAACCCTAATAAGGTACTGCGCCTGCACAAAGCACTCTACGGGCTTCGACAAGCCCCACGAGCCTGGAACGCGAAGCTCGACAGTACCCTACTGTCACTGAATTTCAAACGTTGTGCCTCTGAGCATGGCATGTACACGTACGGCCACGGCAAAAAGCGACTGATCGTGGGAGTGTACGTCGACGACCTCATAATCACTGGAGGCGACGTGGGAGTCCTCGGAAGGTTCAAGAAGGAGATGTCGAAAAACTTCGAGATGAGCGATCTCGGTGTGCTCAGCTACTACCTCGGCATCGAAGTGCAACAGAACTCTTCCGGCATCTCCATCTGCCAAAGTGCATACGCGAGAAAGCTGCTGGACACAACTGGGCTTGTGGACAGTAATCCTACCAGGACGCCAATGGAGGCCCGACTTCAACTAAGGAAGGCCGGCACTACGACGACAGTCGACTCCACCAATTACCGCAGCATTGTCGGGAGTCTGCGCTATCTGGTAAACTCTCGTCCTGATCTTGCTTATTCTGTTGGATATGTGAGTAGGTTTATGGAAGCACCTAGGGAGGAGCATCTAGTGGCTGTCAAGCGCATCCTGCGCTATGTAGCCGGAACCAGAGACTGGGGCGTAAGATACTGCGCTGGGAGCGAAAAGGAGAAACTCAAACTGGTCGGCTACAGCGATAGTGATATGGCCGGTGACGTTGATGATCGTAAGAGCACCAGCGGAATGATCTACTTTCTCTCAGGCGGCGCGATCTGCTGGCAATCAACAAAACAGAAGGTAGTTGCTTTGTCTTCCTGCGAAGCAGAATACATCGCCGCTTCGATGGCAGCAACTCAAGGGATCTGGCTTGCACGACTAATGGAAGAAATCATCGGGAGAGAAAGCGATCCACCAATGCTATACATAGACAACAAAGCTACGATCTCCCTGATCAAAAATCCAGTTTTGCACGACCGGAGCAAGCACATAGAAATCAGATTCCACTACATTCGAGAATGTGCAGATCGAGGGCTCATCAAAATTGATTTCATCCGAACAGAGGAACAACTTGGAGACATTTTCACCAAATCCCTGGCGCGGGTGAAATTTGAAGAACTACGCTCAAAGATCGGAGTTCAAATAATAAGAGTCAACAGTCACTGGGTTTTTTGTGCTTCATGGGGTTTGTGTGGTGGTGGAATTTTGGGTGAAGATGGCGTTGGGAGAAAATTGGCGGCTTCATTGGGCGGTTGCCGGGCCGTTGACGTTGGCGTTTGTGGTGATCACCGCCGCGTGGTTGTTCTTTCCGCCGCTGTTGAAGACTGGCGTGGTGGCTGCAGTTATTGGGGAATGTAA

Protein sequence

MTGARSAFSELDSGIRGTVKFGDGSVVEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANLVSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRLYILELEIDQPVSLSAKTEEVSWRWHARYGHLNFPALEKLQKKELVHGLPEIKGVNKLCDGCLIGKQRRTPFPSRTAYRADEPLELVHGDTCGPIKPATPGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKARAEAECEKKMRVLRTDRGGEFTSASFSKYCDEVGIQRHLTAPYSPQQNGVVERRNQTIVGTARSLLVTAGMPGRFWGEAVMTAVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCVAYMKVTRPHLAKLDPRGLKVVFIGYEPGSKAYRLYDPVGGRAHVSRDVVFDESTFWQWNDVIEADRNPNQFTVEYLVTEPEEGGAQHQETSPPPAGAPPEPVEFATPRTADSTLDADHDTDLEARYRRMDDLVGGGEPPGLAARELEEVAELHAVSADEPNTFAEAEKNPCWRKAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPVARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDSTLLSLNFKRCASEHGMYTYGHGKKRLIVGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDLGVLSYYLGIEVQQNSSGISICQSAYARKLLDTTGLVDSNPTRTPMEARLQLRKAGTTTTVDSTNYRSIVGSLRYLVNSRPDLAYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVRYCAGSEKEKLKLVGYSDSDMAGDVDDRKSTSGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAASMAATQGIWLARLMEEIIGRESDPPMLYIDNKATISLIKNPVLHDRSKHIEIRFHYIRECADRGLIKIDFIRTEEQLGDIFTKSLARVKFEELRSKIGVQIIRVNSHWVFCASWGLCGGGILGEDGVGRKLAASLGGCRAVDVGVCGDHRRVVVLSAAVEDWRGGCSYWGM
Homology
BLAST of CmaCh01G011070 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 650.6 bits (1677), Expect = 3.2e-185
Identity = 397/1040 (38.17%), Postives = 582/1040 (55.96%), Query Frame = 0

Query: 2    TGARSAFSELDSGIRGTVKFGDGSVVEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANLV 61
            T  R  F    +G  GTVK G+ S  +I G G I   +  G    L DV  +P L+ NL+
Sbjct: 305  TPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLI 364

Query: 62   SLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRLYILELEIDQPVSLSAKTEEVS 121
            S   LD  G          ++      +     R T  LY    EI Q   L+A  +E+S
Sbjct: 365  SGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGT--LYRTNAEICQG-ELNAAQDEIS 424

Query: 122  W-RWHARYGHLNFPALEKLQKKELVHGLPEIKGVN-KLCDGCLIGKQRRTPFPSRTAYRA 181
               WH R GH++   L+ L KK L+      KG   K CD CL GKQ R  F + ++ R 
Sbjct: 425  VDLWHKRMGHMSEKGLQILAKKSLI---SYAKGTTVKPCDYCLFGKQHRVSFQT-SSERK 484

Query: 182  DEPLELVHGDTCGPIKPATPGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKARAE 241
               L+LV+ D CGP++  + GG   F+  +DD SR +W+ +L+ K +  +  ++  A  E
Sbjct: 485  LNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVE 544

Query: 242  AECEKKMRVLRTDRGGEFTSASFSKYCDEVGIQRHLTAPYSPQQNGVVERRNQTIVGTAR 301
             E  +K++ LR+D GGE+TS  F +YC   GI+   T P +PQ NGV ER N+TIV   R
Sbjct: 545  RETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVR 604

Query: 302  SLLVTAGMPGRFWGEAVMTAVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCVAYM 361
            S+L  A +P  FWGEAV TA YL+NRSP+  L  + P   W NK+ +  H +VFGC A+ 
Sbjct: 605  SMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFA 664

Query: 362  KVTRPHLAKLDPRGLKVVFIGYEPGSKAYRLYDPVGGRAHVSRDVVFDESTFWQWNDVIE 421
             V +    KLD + +  +FIGY      YRL+DPV  +   SRDVVF ES      D+ E
Sbjct: 665  HVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSE 724

Query: 422  ADRN---PNQFTVEYLVTEPEEGGAQHQETSPPPAGAPPEPVEFATPRTADSTLDADHDT 481
              +N   PN  T+      P    +   E S    G  P  V     +  +   + +H T
Sbjct: 725  KVKNGIIPNFVTIPSTSNNPTSAESTTDEVS--EQGEQPGEVIEQGEQLDEGVEEVEHPT 784

Query: 482  DLEARYRRMDDLVGGGEPPGLAARELEEVAELHAVSADEPNTFAEA----EKNPCWRKAM 541
              E +++ +       E P + +R       +      EP +  E     EKN    KAM
Sbjct: 785  QGEEQHQPL----RRSERPRVESRRYPSTEYVLISDDREPESLKEVLSHPEKNQL-MKAM 844

Query: 542  QEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVD 601
            QEEM S+ +N T+ L ++P G R +  KWVFKLK++   ++V++KARLV KG+ QK+G+D
Sbjct: 845  QEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGID 904

Query: 602  FEEVFAPVARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPGFLDNDNP 661
            F+E+F+PV ++ S+R +L++AA    EV  +DVK+AFL+G+L+E +Y+ QP GF      
Sbjct: 905  FDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKK 964

Query: 662  NKVLRLHKALYGLRQAPRAWNAKLDSTLLSLNFKRCASEHGMYTYGHGKKR-LIVGVYVD 721
            + V +L+K+LYGL+QAPR W  K DS + S  + +  S+  +Y     +   +I+ +YVD
Sbjct: 965  HMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVD 1024

Query: 722  DLIITGGDVGVLGRFKKEMSKNFEMSDLGVLSYYLGIEV--QQNSSGISICQSAYARKLL 781
            D++I G D G++ + K ++SK+F+M DLG     LG+++  ++ S  + + Q  Y  ++L
Sbjct: 1025 DMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVL 1084

Query: 782  DTTGLVDSNPTRTPMEARLQLRKAGTTTTVDSTN------YRSIVGSLRY-LVNSRPDLA 841
            +   + ++ P  TP+   L+L K    TTV+         Y S VGSL Y +V +RPD+A
Sbjct: 1085 ERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIA 1144

Query: 842  YSVGYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVRYCAGSEKEKLKLVGYSDSDMAGD 901
            ++VG VSRF+E P +EH  AVK ILRY+ GT   G   C G     LK  GY+D+DMAGD
Sbjct: 1145 HAVGVVSRFLENPGKEHWEAVKWILRYLRGTT--GDCLCFGGSDPILK--GYTDADMAGD 1204

Query: 902  VDDRKSTSGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAASMAATQGIWLARLMEEIIG 961
            +D+RKS++G ++  SGGAI WQS  QK VALS+ EAEYIAA+    + IWL R ++E +G
Sbjct: 1205 IDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQE-LG 1264

Query: 962  RESDPPMLYIDNKATISLIKNPVLHDRSKHIEIRFHYIRECADRGLIKIDFIRTEEQLGD 1021
                  ++Y D+++ I L KN + H R+KHI++R+H+IRE  D   +K+  I T E   D
Sbjct: 1265 LHQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPAD 1324

Query: 1022 IFTKSLARVKFEELRSKIGV 1023
            + TK + R KFE  +  +G+
Sbjct: 1325 MLTKVVPRNKFELCKELVGM 1325

BLAST of CmaCh01G011070 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 546.6 bits (1407), Expect = 6.5e-154
Identity = 346/1094 (31.63%), Postives = 547/1094 (50.00%), Query Frame = 0

Query: 27   VEIEGRGTILFVSKGG------EHR-KLTDVYFIPRLKANLVSLGQLDETGCFISIERGL 86
            + +  +G  ++ +K G      +H   L DV F      NL+S+ +L E G  I  ++  
Sbjct: 318  IAVAKQGEFIYATKRGIVRLRNDHEITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSG 377

Query: 87   LKICDNQRRLLTQARRTTNRLYILELEIDQPVSLSAKTEEVSWRWHARYGHLNFPALEKL 146
            + I  N   ++  +    N    + +   Q  S++AK +     WH R+GH++   L ++
Sbjct: 378  VTISKNGLMVVKNSGMLNN----VPVINFQAYSINAKHKNNFRLWHERFGHISDGKLLEI 437

Query: 147  QKKELVHGLPEIKGVN---KLCDGCLIGKQRRTPFPS-RTAYRADEPLELVHGDTCGPIK 206
            ++K +      +  +    ++C+ CL GKQ R PF   +       PL +VH D CGPI 
Sbjct: 438  KRKNMFSDQSLLNNLELSCEICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPIT 497

Query: 207  PATPGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKARAEAECEKKMRVLRTDRGG 266
            P T   K+ F++ VD  + +    L++ KS+     +   A++EA    K+  L  D G 
Sbjct: 498  PVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGR 557

Query: 267  EFTSASFSKYCDEVGIQRHLTAPYSPQQNGVVERRNQTIVGTARSLLVTAGMPGRFWGEA 326
            E+ S    ++C + GI  HLT P++PQ NGV ER  +TI   AR+++  A +   FWGEA
Sbjct: 558  EYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEA 617

Query: 327  VMTAVYLLNRSPTRSL--DGKTPYEAWYNKKPTVHHFRVFGCVAYMKVTRPHLAKLDPRG 386
            V+TA YL+NR P+R+L    KTPYE W+NKKP + H RVFG   Y+ +      K D + 
Sbjct: 618  VLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKNKQ-GKFDDKS 677

Query: 387  LKVVFIGYEPGSKAYRLYDPVGGRAHVSRDVVFD------------ESTFWQWNDVIEAD 446
             K +F+GYEP    ++L+D V  +  V+RDVV D            E+ F + +   E  
Sbjct: 678  FKSIFVGYEP--NGFKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENK 737

Query: 447  RNPNQFTVEYLVTEPEEG----------GAQHQETSPPPAGA--------PPEPVEFATP 506
              PN          P E            ++  E    P  +        P E  E    
Sbjct: 738  NFPNDSRKIIQTEFPNESKECDNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNI 797

Query: 507  RTADSTLDADHDTDLEARYRRMDDLV----GGGEP------------------------- 566
            +    + +++     E++ R+ DD +    G G P                         
Sbjct: 798  QFLKDSKESNKYFLNESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDG 857

Query: 567  --------------PGLAARELEE-----VAELHAVSADEPNTFAE---AEKNPCWRKAM 626
                          P ++  E +      V   H +  D PN+F E    +    W +A+
Sbjct: 858  IEIINRRSERLKTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAI 917

Query: 627  QEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVD 686
              E+ +   N TW++   P     +  +WVF +K NE G  +++KARLVA+G+ QK  +D
Sbjct: 918  NTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQID 977

Query: 687  FEEVFAPVARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPGFLDNDNP 746
            +EE FAPVAR+ S RF+L++   ++ +VH MDVK+AFLNG LKE +Y+R P G   + N 
Sbjct: 978  YEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGI--SCNS 1037

Query: 747  NKVLRLHKALYGLRQAPRAWNAKLDSTLLSLNFKRCASEHGMYTYGHG--KKRLIVGVYV 806
            + V +L+KA+YGL+QA R W    +  L    F   + +  +Y    G   + + V +YV
Sbjct: 1038 DNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYV 1097

Query: 807  DDLIITGGDVGVLGRFKKEMSKNFEMSDLGVLSYYLGIEVQQNSSGISICQSAYARKLLD 866
            DD++I  GD+  +  FK+ + + F M+DL  + +++GI ++     I + QSAY +K+L 
Sbjct: 1098 DDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILS 1157

Query: 867  TTGLVDSNPTRTPMEARLQLRKAGTTTTVDSTNYRSIVGSLRY-LVNSRPDLAYSVGYVS 926
               + + N   TP+ +++      +     +T  RS++G L Y ++ +RPDL  +V  +S
Sbjct: 1158 KFNMENCNAVSTPLPSKINYELLNSDEDC-NTPCRSLIGCLMYIMLCTRPDLTTAVNILS 1217

Query: 927  RFMEAPREEHLVAVKRILRYVAGTRDWGVRYCAGSEKEKLKLVGYSDSDMAGDVDDRKST 986
            R+      E    +KR+LRY+ GT D  + +      E  K++GY DSD AG   DRKST
Sbjct: 1218 RYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFEN-KIIGYVDSDWAGSEIDRKST 1277

Query: 987  SGMIY-FLSGGAICWQSTKQKVVALSSCEAEYIAASMAATQGIWLARLMEEIIGRESDPP 1023
            +G ++       ICW + +Q  VA SS EAEY+A   A  + +WL  L+  I  +  +P 
Sbjct: 1278 TGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPI 1337

BLAST of CmaCh01G011070 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 2.3e-151
Identity = 353/1113 (31.72%), Postives = 520/1113 (46.72%), Query Frame = 0

Query: 19   VKFGDGSVVEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANLVSLGQL-DETGCFISIER 78
            V   DGS + I   G+    +K      L ++ ++P +  NL+S+ +L +  G  +    
Sbjct: 360  VMVADGSTIPISHTGSTSLSTK-SRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFP 419

Query: 79   GLLKICDNQRRLLTQARRTTNRLYILELEIDQPVSL--SAKTEEVSWRWHARYGHLNFPA 138
               ++ D    +     +T + LY   +   QPVSL  S  ++     WHAR GH   PA
Sbjct: 420  ASFQVKDLNTGVPLLQGKTKDELYEWPIASSQPVSLFASPSSKATHSSWHARLGH---PA 479

Query: 139  LEKLQKKELVHGLPEIKGVNKL--CDGCLIGKQRRTPFPSRTAYRADEPLELVHGDT-CG 198
               L      + L  +   +K   C  CLI K  + PF S++   +  PLE ++ D    
Sbjct: 480  PSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPF-SQSTINSTRPLEYIYSDVWSS 539

Query: 199  PIKPATPGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKARAEAECEKKMRVLRTD 258
            PI   +      +++ VD  +R+ WL  L+ KS+  E     K   E   + ++    +D
Sbjct: 540  PI--LSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSD 599

Query: 259  RGGEFTSASFSKYCDEVGIQRHLTAPYSPQQNGVVERRNQTIVGTARSLLVTAGMPGRFW 318
             GGEF   +  +Y  + GI    + P++P+ NG+ ER+++ IV T  +LL  A +P  +W
Sbjct: 600  NGGEF--VALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYW 659

Query: 319  GEAVMTAVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCVAYMKVTRPHLAKLDPR 378
              A   AVYL+NR PT  L  ++P++  +   P     RVFGC  Y  +   +  KLD +
Sbjct: 660  PYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDK 719

Query: 379  GLKVVFIGYEPGSKAYRLYDPVGGRAHVSRDVVFDESTFWQWNDVIEADRNPNQFTVEYL 438
              + VF+GY     AY        R ++SR V FDE+ F   N +        Q      
Sbjct: 720  SRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSC 779

Query: 439  VTEPEEGGAQHQETSPPP-------AGAPPE--PVEFATPRTADSTLDADHDTDLEARYR 498
            V  P           P P       A  PP      F   + + S LD+   +   +   
Sbjct: 780  VWSPHTTLPTRTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPE 839

Query: 499  RMDDLVGGGEP--------------------------PGLAARELEEVAE---------- 558
                   G +P                          P   A+ L   A+          
Sbjct: 840  PTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTT 899

Query: 559  ---------------------------------------------------------LHA 618
                                                                     +  
Sbjct: 900  SASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSL 959

Query: 619  VSADEPNTFAEAEKNPCWRKAMQEEMTSITENQTWSLEDMPPGH-RAIGLKWVFKLKRNE 678
             +  EP T  +A K+  WR AM  E+ +   N TW L   PP H   +G +W+F  K N 
Sbjct: 960  AAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNS 1019

Query: 679  KGEVVKHKARLVAKGYVQKQGVDFEEVFAPVARLESVRFLLAIAAHHSWEVHHMDVKSAF 738
             G + ++KARLVAKGY Q+ G+D+ E F+PV +  S+R +L +A   SW +  +DV +AF
Sbjct: 1020 DGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAF 1079

Query: 739  LNGELKETVYVRQPPGFLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDSTLLSLNFKRCA 798
            L G L + VY+ QPPGF+D D PN V +L KALYGL+QAPRAW  +L + LL++ F    
Sbjct: 1080 LQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSV 1139

Query: 799  SEHGMYTYGHGKKRLIVGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDLGVLSYYLGIE 858
            S+  ++    GK  + + VYVDD++ITG D  +L      +S+ F + D   L Y+LGIE
Sbjct: 1140 SDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIE 1199

Query: 859  VQQNSSGISICQSAYARKLLDTTGLVDSNPTRTPMEARLQLRKAGTTTTVDSTNYRSIVG 918
             ++  +G+ + Q  Y   LL  T ++ + P  TPM    +L     T   D T YR IVG
Sbjct: 1200 AKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVG 1259

Query: 919  SLRYLVNSRPDLAYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVRYCAGSEKEKL 978
            SL+YL  +RPD++Y+V  +S+FM  P EEHL A+KRILRY+AGT + G+    G+    L
Sbjct: 1260 SLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGN---TL 1319

Query: 979  KLVGYSDSDMAGDVDDRKSTSGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAASMAATQ 1023
             L  YSD+D AGD DD  ST+G I +L    I W S KQK V  SS EAEY + +  +++
Sbjct: 1320 SLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSE 1379

BLAST of CmaCh01G011070 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 1.9e-145
Identity = 346/1118 (30.95%), Postives = 529/1118 (47.32%), Query Frame = 0

Query: 19   VKFGDGSVVEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANLVSLGQLDETGCFISIE-- 78
            V   DGS + I   G+   +        L  V ++P +  NL+S+ +L  T   +S+E  
Sbjct: 339  VMIADGSTIPITHTGS-ASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTN-RVSVEFF 398

Query: 79   RGLLKICDNQRRLLTQARRTTNRLYILELEIDQPVSLSAK--TEEVSWRWHARYGHLNFP 138
                ++ D    +     +T + LY   +   Q VS+ A   ++     WH+R GH   P
Sbjct: 399  PASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGH---P 458

Query: 139  ALEKLQKKELVHGLPEIKGVNKL--CDGCLIGKQRRTPFPSRTAYRADEPLELVHGDT-C 198
            +L  L      H LP +   +KL  C  C I K  + PF S +   + +PLE ++ D   
Sbjct: 459  SLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPF-SNSTITSSKPLEYIYSDVWS 518

Query: 199  GPIKPATPGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKARAEAECEKKMRVLRT 258
             PI   +      +++ VD  +R+ WL  L+ KS+  +     K+  E   + ++  L +
Sbjct: 519  SPI--LSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYS 578

Query: 259  DRGGEFTSASFSKYCDEVGIQRHLTAPYSPQQNGVVERRNQTIVGTARSLLVTAGMPGRF 318
            D GGEF       Y  + GI    + P++P+ NG+ ER+++ IV    +LL  A +P  +
Sbjct: 579  DNGGEF--VVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTY 638

Query: 319  WGEAVMTAVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCVAYMKVTRPHLAKLDP 378
            W  A   AVYL+NR PT  L  ++P++  + + P     +VFGC  Y  +   +  KL+ 
Sbjct: 639  WPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLED 698

Query: 379  RGLKVVFIGYEPGSKAYRLYDPVGGRAHVSRDVVFDESTF--------WQWNDVIEADRN 438
            +  +  F+GY     AY       GR + SR V FDE  F           +    +D  
Sbjct: 699  KSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSA 758

Query: 439  PNQFTVEYLVTEPEEGGA-----QHQETSPPPAGAPP------------EPVEFATPRTA 498
            PN  +   L T P    A      H +TSP P  +P                  ++P ++
Sbjct: 759  PNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSS 818

Query: 499  DSTLDADHDTDLEARYRRMDDLVGGGE--------------------------------- 558
            + T  + +     A+  +  +                                       
Sbjct: 819  EPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPT 878

Query: 559  ---------------------PPGLAARELEEV-----AELHAVSA-------------- 618
                                 PP L A  + +V        H+++               
Sbjct: 879  PSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYS 938

Query: 619  --------DEPNTFAEAEKNPCWRKAMQEEMTSITENQTWSL-EDMPPGHRAIGLKWVFK 678
                     EP T  +A K+  WR+AM  E+ +   N TW L    PP    +G +W+F 
Sbjct: 939  YATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFT 998

Query: 679  LKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPVARLESVRFLLAIAAHHSWEVHHMD 738
             K N  G + ++KARLVAKGY Q+ G+D+ E F+PV +  S+R +L +A   SW +  +D
Sbjct: 999  KKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLD 1058

Query: 739  VKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDSTLLSLN 798
            V +AFL G L + VY+ QPPGF+D D P+ V RL KA+YGL+QAPRAW  +L + LL++ 
Sbjct: 1059 VNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVG 1118

Query: 799  FKRCASEHGMYTYGHGKKRLIVGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDLGVLSY 858
            F    S+  ++    G+  + + VYVDD++ITG D  +L      +S+ F + +   L Y
Sbjct: 1119 FVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHY 1178

Query: 859  YLGIEVQQNSSGISICQSAYARKLLDTTGLVDSNPTRTPMEARLQLRKAGTTTTVDSTNY 918
            +LGIE ++   G+ + Q  Y   LL  T ++ + P  TPM    +L     T   D T Y
Sbjct: 1179 FLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEY 1238

Query: 919  RSIVGSLRYLVNSRPDLAYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVRYCAGS 978
            R IVGSL+YL  +RPDL+Y+V  +S++M  P ++H  A+KR+LRY+AGT D G+    G+
Sbjct: 1239 RGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGN 1298

Query: 979  EKEKLKLVGYSDSDMAGDVDDRKSTSGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAAS 1023
                L L  YSD+D AGD DD  ST+G I +L    I W S KQK V  SS EAEY + +
Sbjct: 1299 ---TLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVA 1358

BLAST of CmaCh01G011070 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 204.5 bits (519), Expect = 6.0e-51
Identity = 114/305 (37.38%), Postives = 173/305 (56.72%), Query Frame = 0

Query: 623 MDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDSTLLS 682
           MDV +AFLN  + E +YV+QPPGF++  NP+ V  L+  +YGL+QAP  WN  +++TL  
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 683 LNFKRCASEHGMYTYGHGKKRLIVGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDLGVL 742
           + F R   EHG+Y        + + VYVDDL++      +  R K+E++K + M DLG +
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 743 SYYLGIEVQQNSSG-ISICQSAYARKLLDTTGLVDSNPTRTPMEARLQLRKAGTTTTVDS 802
             +LG+ + Q+S+G I++    Y  K    + +     T+TP+     L +  +    D 
Sbjct: 121 DKFLGLNIHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDI 180

Query: 803 TNYRSIVGSLRYLVNS-RPDLAYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVRY 862
           T Y+SIVG L +  N+ RPD++Y V  +SRF+  PR  HL + +R+LRY+  TR   ++Y
Sbjct: 181 TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKY 240

Query: 863 CAGSEKEKLKLVGYSDSDMAGDVDDRKSTSGMIYFLSGGAICWQSTKQK-VVALSSCEAE 922
            +GS+   L L  Y D+      D   ST G +  L+G  + W S K K V+ + S EAE
Sbjct: 241 RSGSQ---LALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAE 300

Query: 923 YIAAS 925
           YI AS
Sbjct: 301 YITAS 302

BLAST of CmaCh01G011070 vs. ExPASy TrEMBL
Match: Q7XPB1 (OSJNBb0026E15.10 protein OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBb0026E15.10 PE=4 SV=2)

HSP 1 Score: 1330.9 bits (3443), Expect = 0.0e+00
Identity = 655/1037 (63.16%), Postives = 801/1037 (77.24%), Query Frame = 0

Query: 1    MTGARSAFSELDSGIRGTVKFGDGSVVEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANL 60
            MTG+RSAF+ELD+ + GTV+FGDGSVV IEGR T+LF  + GEHR +  VY+IPRL AN+
Sbjct: 405  MTGSRSAFAELDTAVTGTVRFGDGSVVRIEGRVTVLFSCRFGEHRGIAGVYYIPRLTANI 464

Query: 61   VSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRLYILELEIDQPVSLSAKTEEV 120
            VSLGQLD +G  + I  G+L + D +  LL + RR+ + LY ++L+ID+PV L+A++ E 
Sbjct: 465  VSLGQLDRSGSKVLIHHGILHVWDPRGHLLVRVRRSDDCLYTIKLDIDRPVCLAARSAEP 524

Query: 121  SWRWHARYGHLNFPALEKLQKKELVHGLPEIKGVNKLCDGCLIGKQRRTPFPSRTAYRAD 180
            +WRWHARYGHLNFPAL KL ++E+V GLP ++ V ++CDGCL+GKQRR  FP+++ YRAD
Sbjct: 525  AWRWHARYGHLNFPALRKLAQQEMVRGLPLLQQVTQVCDGCLLGKQRRAAFPTQSKYRAD 584

Query: 181  EPLELVHGDTCGPIKPATPGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKARAEA 240
            E LELVHGD CGPI+PATP G   FLLLVDD SR+MWLT++++K EAA A+K  +ARAE 
Sbjct: 585  EHLELVHGDLCGPIEPATPAGNRYFLLLVDDMSRYMWLTMIRSKDEAANAIKHFQARAEV 644

Query: 241  ECEKKMRVLRTDRGGEFTSASFSKYCDEVGIQRHLTAPYSPQQNGVVERRNQTIVGTARS 300
            E  +K+R LR DRG EFTS  F +YC  +G+ R LTAPYSPQQNGVVERRNQTIV TARS
Sbjct: 645  ESGRKLRALRMDRGSEFTSIEFGEYCANLGVGRQLTAPYSPQQNGVVERRNQTIVATARS 704

Query: 301  LLVTAGMPGRFWGEAVMTAVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCVAYMK 360
            ++   G+PGRFWGEA+ TAV+LLNRSPT+SLD +TPYEAWY + P VH  R FGCV ++K
Sbjct: 705  MMKAKGVPGRFWGEAMSTAVFLLNRSPTKSLDNQTPYEAWYGQWPAVHFLRTFGCVGHVK 764

Query: 361  VTRPHLAKLDPRGLKVVFIGYEPGSKAYRLYDPVGGRAHVSRDVVFDESTFWQWNDVI-E 420
            +T+P L KLD R   +V +GYE GSKAYRLYDPV  R HVSRDVVFDE   W W  V  +
Sbjct: 765  ITKPGLKKLDDRSAPMVLLGYEQGSKAYRLYDPVSERVHVSRDVVFDEDIAWDWGPVTPD 824

Query: 421  ADRNPNQFTVEYLVT--------------EPEEGGAQHQETSPPPAGAPPEPVEFATPRT 480
                   FTVE +VT               P         T  PP+   PE VEF TP T
Sbjct: 825  GAPQLEPFTVEQVVTTTIGTAPASSPTPPSPPSPAPSAPTTPAPPSPPSPEAVEFVTPPT 884

Query: 481  ADSTLDADHDTDLEARYRRMDDLVGGGEPPGLAARELEEVAELHAVSADEPNTFAEAEKN 540
             DS LDAD D D+  RYR +D+L+G   PPG A R LE++ ELH VSADEP + AEAE +
Sbjct: 885  QDSILDADADDDVVPRYRLVDNLLGNASPPGHAPRVLEQL-ELHVVSADEPASLAEAEAD 944

Query: 541  PCWRKAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGY 600
            P WR AMQ+E+ +I +N TWSL D+P GHRAIGLKWV+KLKR+E+G +V++KARLVAKGY
Sbjct: 945  PSWRGAMQDELNAIVDNDTWSLTDLPHGHRAIGLKWVYKLKRDEQGAIVRYKARLVAKGY 1004

Query: 601  VQKQGVDFEEVFAPVARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPG 660
            VQ+QGVDF+EVFA VARLESVR LLA+AAH  W+VHHMDVKSAFLNGEL E VYV QPPG
Sbjct: 1005 VQRQGVDFDEVFALVARLESVRLLLAVAAHQGWQVHHMDVKSAFLNGELLEEVYVSQPPG 1064

Query: 661  FLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDSTLLSLNFKRCASEHGMYTYGHGKKRLI 720
            F+D+++ NKV RLHKALYGLRQAPRAWNAKLDS+LLSL F R +SEHG+YT   G +RL+
Sbjct: 1065 FVDDNHKNKVYRLHKALYGLRQAPRAWNAKLDSSLLSLGFHRSSSEHGVYTRTRGGRRLM 1124

Query: 721  VGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDLGVLSYYLGIEVQQNSSGISICQSAYA 780
            VGVYVDDLIITG     +  FK EM K F+MSDLG L YYLGIEV Q+S GI++ Q+AYA
Sbjct: 1125 VGVYVDDLIITGDHDDEIRSFKGEMMKLFKMSDLGALRYYLGIEVTQDSDGITLGQAAYA 1184

Query: 781  RKLLDTTGLVDSNPTRTPMEARLQLRKAGTTTTVDSTNYRSIVGSLRYLVNSRPDLAYSV 840
             K+L+  GL D NP +TPME RL+LRK      VD+T YRS+VGSLRYLVN+RPDLA+SV
Sbjct: 1185 GKILEKAGLKDCNPCQTPMEVRLKLRKGSDFPLVDATLYRSLVGSLRYLVNTRPDLAFSV 1244

Query: 841  GYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVRYCAGSEKEKLKLVGYSDSDMAGDVDD 900
            GYVSRFME+PRE+HL AV+RILRYVAGTR WG+R+  G+      LVGYSDSD+AGD D+
Sbjct: 1245 GYVSRFMESPREDHLAAVRRILRYVAGTRCWGIRFGPGARCALPMLVGYSDSDLAGDPDE 1304

Query: 901  RKSTSGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAASMAATQGIWLARLMEEIIGRES 960
            RKSTSG I+F++GG + WQS+KQKVVALSSCEAEYIAA+ A  QG+WLARL+ E++G E 
Sbjct: 1305 RKSTSGQIFFINGGPVTWQSSKQKVVALSSCEAEYIAAAAATCQGVWLARLLAEVLGDEI 1364

Query: 961  DPPMLYIDNKATISLIKNPVLHDRSKHIEIRFHYIRECADRGLIKIDFIRTEEQLGDIFT 1020
              P+L +DN++TISLIKNPV HDRSKHI++++HYIRECA++ LI++ F+ T EQLGDIFT
Sbjct: 1365 TAPLLKVDNQSTISLIKNPVHHDRSKHIDVKYHYIRECAEKKLIEMMFVGTAEQLGDIFT 1424

Query: 1021 KSLARVKFEELRSKIGV 1023
            KSL R +F+ELRSKIGV
Sbjct: 1425 KSLGRTRFQELRSKIGV 1440

BLAST of CmaCh01G011070 vs. ExPASy TrEMBL
Match: A0B9X7 (OSIGBa0135C09.3 protein OS=Oryza sativa OX=4530 GN=OSIGBa0135C09.3 PE=4 SV=1)

HSP 1 Score: 1294.3 bits (3348), Expect = 0.0e+00
Identity = 643/1038 (61.95%), Postives = 785/1038 (75.63%), Query Frame = 0

Query: 1    MTGARSAFSELDSGIRGTVKFGDGSVVEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANL 60
            MTG+RSAF++LD+ + GTV+FGDGSVV IEGRGT+LF  + GEHR +  VY+IPRL AN+
Sbjct: 338  MTGSRSAFAKLDTAVTGTVRFGDGSVVRIEGRGTVLFSCRFGEHRGIAGVYYIPRLTANI 397

Query: 61   VSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRLYILELEIDQPVSLSAKTEEV 120
            VSLGQLD +G  + I  G+L++ D +  LL + RR+ + LY ++L ID+PV L+A++ + 
Sbjct: 398  VSLGQLDRSGSKVLIHHGVLRVWDPRGHLLVRVRRSDDCLYTIKLNIDRPVYLAARSAKP 457

Query: 121  SWRWHARYGHLNFPALEKLQKKELVHGLPEIKGVNKLCDGCLIGKQRRTPFPSRTAYRAD 180
            +WRWHARYGHLNFP+L KL ++E+V GLP ++ V ++CDGCL+GKQRR  FP+++ YRAD
Sbjct: 458  AWRWHARYGHLNFPSLRKLAQQEMVRGLPLLQQVTQVCDGCLLGKQRRAAFPTQSKYRAD 517

Query: 181  EPLELVHGDTCGPIKPATPGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKARAEA 240
            E LELVHGD CGPI+PATP G   FLLLVDD SR+MWLTL+++K EAA A+K  +A AE 
Sbjct: 518  EHLELVHGDLCGPIEPATPAGNRYFLLLVDDMSRYMWLTLIRSKDEAANAIKHFQAHAEV 577

Query: 241  ECEKKMRVLRTDRGGEFTSASFSKYCDEVGIQRHLTAPYSPQQNGVVERRNQTIVGTARS 300
            E  +K+R LRTDRGGEFTS  F +YC  + + R LTAPYSPQQNGVVERRNQTIV TARS
Sbjct: 578  ESGRKLRALRTDRGGEFTSIEFGEYCANLRVGRQLTAPYSPQQNGVVERRNQTIVATARS 637

Query: 301  LLVTAGMPGRFWGEAVMTAVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCVAYMK 360
            ++   G+PGRFWGEA+ TAV+LLNRSPT+SLD +TPYEAWY ++P VH  R FGCV ++K
Sbjct: 638  MMKAKGVPGRFWGEAMSTAVFLLNRSPTKSLDNQTPYEAWYGQRPAVHFLRTFGCVGHVK 697

Query: 361  VTRPHLAKLDPRGLKVVFIGYEPGSKAYRLYDPVGGRAHVSRDVVFDESTFWQWNDVIEA 420
            +T+P L KLD R   +V +GYE GSKAYRLYDPV  R HVSRDVVFDE   W W   +  
Sbjct: 698  ITKPGLKKLDDRSAPMVLLGYEQGSKAYRLYDPVSERVHVSRDVVFDEDAAWDWGP-LTP 757

Query: 421  DRNP--NQFTVEYLVT--------------EPEEGGAQHQETSPPPAGAPPEPVEFATPR 480
            D  P    FTVE +VT               P         T  PP+   PE VEF TP 
Sbjct: 758  DGAPQLEPFTVEQVVTTTIGTAPASSLTPPSPPSPAPSAPTTPAPPSPPSPEAVEFVTPP 817

Query: 481  TADSTLDADHDTDLEARYRRMDDLVGGGEPPGLAARELEEVAELHAVSADEPNTFAEAEK 540
            T DS LDAD D D+  RY  +D+L+G   PPG A R LE++ ELH VSADEP + AEAE 
Sbjct: 818  TQDSILDADADDDVVPRYHLVDNLLGNASPPGHAPRVLEQL-ELHVVSADEPASLAEAEA 877

Query: 541  NPCWRKAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKG 600
            +P WR AMQ+E+ +I +N TWSL D+P GHRAIGLKW                ARLVAKG
Sbjct: 878  DPNWRGAMQDELNAIVDNDTWSLTDLPHGHRAIGLKW----------------ARLVAKG 937

Query: 601  YVQKQGVDFEEVFAPVARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPP 660
            YVQ+QGVDF+EVFAPVARLE VR LLAIAAH  W+VHHMDVKSAFLNGEL E VYV QPP
Sbjct: 938  YVQRQGVDFDEVFAPVARLELVRLLLAIAAHQGWQVHHMDVKSAFLNGELLEEVYVSQPP 997

Query: 661  GFLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDSTLLSLNFKRCASEHGMYTYGHGKKRL 720
            GF+D+++ NKV RLHKALYGLRQAPRAWN KLDS+LLSL F R +SEHG+YT   G +RL
Sbjct: 998  GFVDDNHKNKVYRLHKALYGLRQAPRAWNTKLDSSLLSLGFHRSSSEHGVYTRTRGGRRL 1057

Query: 721  IVGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDLGVLSYYLGIEVQQNSSGISICQSAY 780
             VGVYVDDLIITG     +  FK EM K F+MSDLG L YYLGIEV Q+S GI++ Q+AY
Sbjct: 1058 TVGVYVDDLIITGDHDDEIRSFKGEMMKLFKMSDLGALRYYLGIEVTQDSDGITLGQAAY 1117

Query: 781  ARKLLDTTGLVDSNPTRTPMEARLQLRKAGTTTTVDSTNYRSIVGSLRYLVNSRPDLAYS 840
            A K+L+  GL D NP +TPME RL+LRK      VD+T YRS+VGSLRYLVN+RPDLA+S
Sbjct: 1118 AGKILEKAGLKDCNPCQTPMEVRLKLRKGSDFPLVDATLYRSLVGSLRYLVNTRPDLAFS 1177

Query: 841  VGYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVRYCAGSEKEKLKLVGYSDSDMAGDVD 900
            VGYVSRFME+PRE+HL AV+RILRYVAGTR WG+R+  G+      LVGYSDSD+AGD D
Sbjct: 1178 VGYVSRFMESPREDHLAAVRRILRYVAGTRCWGIRFGPGARCALPMLVGYSDSDLAGDPD 1237

Query: 901  DRKSTSGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAASMAATQGIWLARLMEEIIGRE 960
            +RKSTSG I+F++GG + WQS+K+KVVALSSCEAEYIAA+    QG+WLARL+ E++G E
Sbjct: 1238 ERKSTSGQIFFINGGPVTWQSSKKKVVALSSCEAEYIAAAATTCQGVWLARLLAEVLGDE 1297

Query: 961  SDPPMLYIDNKATISLIKNPVLHDRSKHIEIRFHYIRECADRGLIKIDFIRTEEQLGDIF 1020
               P+L +DN++TISLIKNPV HDRSKHI++++HYIRECA++ LI++ F+ T EQLGDIF
Sbjct: 1298 IAAPLLKVDNQSTISLIKNPVHHDRSKHIDVKYHYIRECAEKKLIEMMFVGTAEQLGDIF 1357

Query: 1021 TKSLARVKFEELRSKIGV 1023
            TKSL R +F+ELRSKIGV
Sbjct: 1358 TKSLGRTRFQELRSKIGV 1357

BLAST of CmaCh01G011070 vs. ExPASy TrEMBL
Match: Q0J5Y3 (Os08g0389500 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0389500 PE=4 SV=1)

HSP 1 Score: 1261.1 bits (3262), Expect = 0.0e+00
Identity = 628/1055 (59.53%), Postives = 778/1055 (73.74%), Query Frame = 0

Query: 1    MTGARSAFSELDSGIRGTVKFGDGSVVEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANL 60
            MTG RSAFSEL++GIRGTVKFGDGSVV IEGRGT+LF  K GEH+ L  VY IPRL  N+
Sbjct: 399  MTGTRSAFSELNTGIRGTVKFGDGSVVGIEGRGTVLFKCKDGEHQALEGVYHIPRLTTNI 458

Query: 61   VSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRLYILELEIDQPVSLSAKTEEV 120
            VSLGQLDE     S E G+LKI + QRRLL +  R+ NRLY+++L I +PV L+A+  ++
Sbjct: 459  VSLGQLDEEKFKWSCEDGVLKIWNKQRRLLAKVVRSPNRLYVVKLNIGRPVCLAAQGGDI 518

Query: 121  SWRWHARYGHLNFPALEKLQKKELVHGLPEIKGVNKLCDGCLIGKQRRTPFPSRTAYRAD 180
            +WRWHAR+GHLNF ALEKL +  +V GLP I  V+++CD CL+GKQRR PFPS+  YRA 
Sbjct: 519  AWRWHARFGHLNFRALEKLGRAVMVRGLPLINHVDQVCDSCLVGKQRRLPFPSKAKYRAK 578

Query: 181  EPLELVHGDTCGPIKPATPGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKARAEA 240
            E LELVHGD CGP+ PATP G  LFLLLVDD SR+MWL LL +K +A+ A+KR  A AEA
Sbjct: 579  EKLELVHGDICGPVTPATPSGNKLFLLLVDDLSRYMWLILLSSKDQASVAIKRFLACAEA 638

Query: 241  ECEKKMRVLRTDRGGEFTSASFSKYCDEVGIQRHLTAPYSPQQNGVVERRNQTIVGTARS 300
            E  +K+R LRTDRGGEFT+ +F++YC E GIQRHLTAPY+PQQNGVVERRNQT++G ARS
Sbjct: 639  EAGRKLRTLRTDRGGEFTAHAFAEYCAEHGIQRHLTAPYTPQQNGVVERRNQTVMGMARS 698

Query: 301  LLVTAGMPGRFWGEAVMTAVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCVAYMK 360
            ++    +PG FWGEAV TAV+LLNR+PT+ +DGKTP+E W+  KP VH  R FGCVA++K
Sbjct: 699  MMKAKSLPGWFWGEAVNTAVFLLNRAPTQCVDGKTPFEVWHGVKPPVHFLRTFGCVAHVK 758

Query: 361  VTRPHLAKLDPRGLKVVFIGYEPGSKAYRLYDPVGGRAHVSRDVVFDESTFWQWNDVIEA 420
                 LAKLD R + +VF+GYE G+KAYR Y+PV  R HVSRD VF+E   W+W     A
Sbjct: 759  NGGQRLAKLDDRSMPMVFVGYEAGTKAYRFYNPVSRRVHVSRDAVFEEERSWEWGAEKGA 818

Query: 421  --DRNPNQFTVEYLVTEPE-EGG-------AQHQETSPP--------------------- 480
              D +   F VE+L T P  +GG       A  + TS P                     
Sbjct: 819  GPDDDIEPFVVEHLATGPTGQGGPVAATPTATQRSTSAPAPMAPPATPSQAGTPTHGAGP 878

Query: 481  --PAGAPPEPVEFATPRTADSTLDADHDTDLEARYRRMDDLVGGGEPPGLAARELEEVAE 540
              PA A    +EFA+P   D  LD DHD D+  R+R +D+L+G   PPGLA RE+ E   
Sbjct: 879  RTPASASSPAIEFASPPQGDLDLDNDHDDDVPLRFRTVDNLLGASSPPGLAEREVTE--G 938

Query: 541  LHAVSADEPNTFAEAEKNPCWRKAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKR 600
            L     DEP T  EA++   WR+AM EEM SI  N+TWSL ++P G RAIGLKWVFK+K+
Sbjct: 939  LMVAIEDEPATAEEAKQVKEWREAMIEEMASIEHNKTWSLVELPAGQRAIGLKWVFKIKK 998

Query: 601  NEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPVARLESVRFLLAIAAHHSWEVHHMDVKS 660
            +E G + KHKARLVAKGYVQ+QG+D+EEVFAPVAR+ESVR LLA+AAH SW VHHMDVKS
Sbjct: 999  DEHGNITKHKARLVAKGYVQRQGIDYEEVFAPVARIESVRVLLAVAAHRSWSVHHMDVKS 1058

Query: 661  AFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDSTLLSLNFKR 720
            AFLNG+L E VYV+QPPGF+   +  KVL+LHKALYGL+QAPRAWN+KLDS+LL L F R
Sbjct: 1059 AFLNGDLAEEVYVQQPPGFVAAGHERKVLKLHKALYGLKQAPRAWNSKLDSSLLMLGFAR 1118

Query: 721  CASEHGMYTYGHGKKRLIVGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDLGVLSYYLG 780
               EHG+YT   G+KRL+VG+YVDDLIITGG   V+  FK EM   F MSDLGVLSYYLG
Sbjct: 1119 SECEHGLYTRSDGEKRLVVGIYVDDLIITGGSTEVINTFKTEMKTLFRMSDLGVLSYYLG 1178

Query: 781  IEVQQNSSGISICQSAYARKLLDTTGLVDSNPTRTPMEARLQLRKAGTTTTVDSTNYRSI 840
            IEV+Q   GI + Q+AYA+K+L+  G+   NP  TPMEARL+L K  T+  VD+T YRS+
Sbjct: 1179 IEVRQGRRGIELLQAAYAKKILEKAGMGTCNPCATPMEARLKLSKQSTSPAVDATEYRSL 1238

Query: 841  VGSLRYLVNSRPDLAYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVRYCAGSEKE 900
            +GSLRYL+N+RPD+A++VGY+SRFME PR+EHL A+K +LRYVAGT D+G+ Y +G    
Sbjct: 1239 IGSLRYLMNTRPDMAFAVGYLSRFMENPRQEHLAAMKHLLRYVAGTIDYGLVYTSGD--T 1298

Query: 901  KLKLVGYSDSDMAGDVDDRKSTSGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAASMAA 960
            +  LVGYSDSDMAGD+DDRKSTSG+IYFL G  + WQS KQ+VVALSSCEAEYIA + AA
Sbjct: 1299 EFNLVGYSDSDMAGDIDDRKSTSGIIYFLGGNPVAWQSQKQRVVALSSCEAEYIAGAAAA 1358

Query: 961  TQGIWLARLMEEIIGRESDPPMLYIDNKATISLIKNPVLHDRSKHIEIRFHYIRECADRG 1020
             QG+WL RL+++++G    PP L +DN++ I+L KNPVLHDRSKHI+ +FH++REC D G
Sbjct: 1359 CQGVWLRRLLQDVVGVSGPPPQLKMDNQSAIALSKNPVLHDRSKHIDTKFHFLRECVDSG 1418

Query: 1021 LIKIDFIRTEEQLGDIFTKSLARVKFEELRSKIGV 1023
             +++ F+ T+ QL DI TK+L R KF+ELR  IGV
Sbjct: 1419 AVRLAFVSTQAQLADIMTKALGRSKFQELRELIGV 1449

BLAST of CmaCh01G011070 vs. ExPASy TrEMBL
Match: A0A1P8YYM3 (Reverse transcriptase OS=Zea mays OX=4577 GN=FGENESH_28 PE=4 SV=1)

HSP 1 Score: 1236.9 bits (3199), Expect = 0.0e+00
Identity = 622/1065 (58.40%), Postives = 762/1065 (71.55%), Query Frame = 0

Query: 1    MTGARSAFSELDSGIRGTVKFGDGSVVEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANL 60
            MTG+R  FSELDSG+ GTVKFGDGSVV IEG+GT+LF  + GEHR+L  VY+IPRL  N+
Sbjct: 575  MTGSRHVFSELDSGVTGTVKFGDGSVVNIEGKGTVLFALRSGEHRRLDGVYYIPRLMTNI 634

Query: 61   VSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRLYILELEIDQPVSLSAKTEEV 120
            VSLGQ+DE G  + IE G+L++ D QRRLL                        AK    
Sbjct: 635  VSLGQMDEEGLKVVIEEGVLRLFDLQRRLL------------------------AKRGSA 694

Query: 121  SWRWHARYGHLNFPALEKLQKKELVHGLPEIKGVNKLCDGCLIGKQRRTPFPSRTAYRAD 180
            +WRWH RYGHLNF AL KL+++E+V GLP I  V+++C+ C++ KQ+R PFP    YRA 
Sbjct: 695  TWRWHERYGHLNFQALRKLEREEMVRGLPSIDRVDQVCEDCILAKQKRAPFPQAAKYRAQ 754

Query: 181  EPLELVHGDTCGPIKPATPGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKARAEA 240
            E LELVHGD CGPI P TP G + FLLLVDD SRFMWLTLL++K++A   +   +AR E 
Sbjct: 755  EELELVHGDLCGPISPPTPTGNAYFLLLVDDMSRFMWLTLLRSKADAPSTIMLFQARVER 814

Query: 241  ECEKKMRVLRTDRGGEFTSASFSKYCDEVGIQRHLTAPYSPQQNGVVERRNQTIVGTARS 300
            EC KK++VLRTD GGEFTS  F ++C   GIQRH +APY+PQQNGVVERRNQ +V TARS
Sbjct: 815  ECGKKLKVLRTDNGGEFTSVQFGEHCAGEGIQRHFSAPYTPQQNGVVERRNQMVVSTARS 874

Query: 301  LLVTAGMPGRFWGEAVMTAVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCVAYMK 360
            +L   GMPG FWGEAV TAV+LLNR+PT +L+G+TPY+AWY KKP VH  +VFGCVAY+K
Sbjct: 875  ILRARGMPGHFWGEAVHTAVFLLNRAPTAALNGRTPYQAWYGKKPAVHFLKVFGCVAYIK 934

Query: 361  VTRPHLAKLDPRGLKVVFIGYEPGSKAYRLYDPVGGRAHVSRDVVFDESTFWQWNDVIE- 420
              RPHL+KL+ RG KVVFIGY+ GSKAYR YDPV  R HVSRD VF+E     W   I+ 
Sbjct: 935  RPRPHLSKLEDRGQKVVFIGYQDGSKAYRFYDPVTERVHVSRDAVFNEGARLDWGGAIDT 994

Query: 421  ADRNPNQFTVEY------------------------LVTEPEEGGAQHQET--------- 480
             D +P     EY                        L   P         T         
Sbjct: 995  VDMHPFTVAEEYELRHQQVEGSALEPISPEARTPAPLALSPRSASTPSTPTPHTVSPTAP 1054

Query: 481  -------SPPPAGAPPEPVEFATPRTADSTLDADHDTDLEARYRRMDDLVGGGEPPGLAA 540
                   SP    AP   ++FATP + D + DAD   +L  RYR +D++   G  PGL  
Sbjct: 1055 STSATASSPSTPQAPRTHIKFATPLSTDPSFDADDVGEL--RYRTLDNIHSVGAAPGLVH 1114

Query: 541  RELEEVAELHAVSADEPNTFAEAEKNPCWRKAMQEEMTSITENQTWSLEDMPPGHRAIGL 600
             + +E AELH VS +EP T  EA+ +P W  AM+EE+ SI +N+TWSL ++P GHRAIGL
Sbjct: 1115 HD-DEHAELHVVSVEEPRTLKEADGDPNWVAAMEEELASIRDNKTWSLAELPHGHRAIGL 1174

Query: 601  KWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPVARLESVRFLLAIAAHHSWE 660
            KWV+K+KR+E   +VK+KARLVAKGYVQ+ GVDF+EVFAPVAR ESVR LLAIAAH+ W 
Sbjct: 1175 KWVYKVKRDENDNIVKYKARLVAKGYVQQPGVDFDEVFAPVARQESVRLLLAIAAHYGWG 1234

Query: 661  VHHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDST 720
            VHHMDVKSAFLNGEL+E VYV+QPPGF+D  +  KVLRLHKALYGLRQAPRAWN KLD+ 
Sbjct: 1235 VHHMDVKSAFLNGELQEEVYVQQPPGFVDERHKYKVLRLHKALYGLRQAPRAWNQKLDAE 1294

Query: 721  LLSLNFKRCASEHGMYTYGHGKKRLIVGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDL 780
            LL+L F RC +EHGMYT G G+ RLIVGVYVDDLIITGGD G + +FK +M K F+MSDL
Sbjct: 1295 LLALGFARCVNEHGMYTRGKGEARLIVGVYVDDLIITGGDAGAVAKFKVQMQKIFKMSDL 1354

Query: 781  GVLSYYLGIEVQQNSSGISICQSAYARKLLDTTGLVDSNPTRTPMEARLQLRKAGTTTTV 840
            G+LSYYLG+EV Q + GI++ QSAYA K+L+  GL   N + TPME +L+L K GTT +V
Sbjct: 1355 GLLSYYLGLEVTQGAQGITLRQSAYATKVLEKAGLAGCNASATPMEPKLKLLKEGTTPSV 1414

Query: 841  DSTNYRSIVGSLRYLVNSRPDLAYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVR 900
            D T YRS++GSLRYL NSRPDLAY VGY+SRFMEAPR+EHL AVKR+LRYVAGT  WG+ 
Sbjct: 1415 DVTEYRSLIGSLRYLCNSRPDLAYPVGYLSRFMEAPRQEHLAAVKRVLRYVAGTLHWGLH 1474

Query: 901  Y-CAGSEKEKLKLVGYSDSDMAGDVDDRKSTSGMIYFLSGGAICWQSTKQKVVALSSCEA 960
            Y  +G  +   +L+GYSDSD+AGDV+DRKSTSG+I+FL+GG + WQS KQKVVALSSCEA
Sbjct: 1475 YHPSGKNEGAPQLLGYSDSDLAGDVNDRKSTSGLIFFLAGGPVAWQSAKQKVVALSSCEA 1534

Query: 961  EYIAASMAATQGIWLARLMEEIIGRESDPPMLYIDNKATISLIKNPVLHDRSKHIEIRFH 1020
            EYIAA+ AA + +WLARL+ E+IG     P L +DNK+ I+L+KNPV HDRSKHI+++FH
Sbjct: 1535 EYIAAAAAACEAVWLARLLAELIGGAVLAPKLKVDNKSAIALMKNPVHHDRSKHIDVKFH 1594

Query: 1021 YIRECADRGLIKIDFIRTEEQLGDIFTKSLARVKFEELRSKIGVQ 1024
            +IREC DR LI ++F+ TE QLGDI TK+L R +  ELR  I ++
Sbjct: 1595 FIRECCDRKLIDVEFVGTELQLGDILTKALGRTRLHELRGLIDMK 1612

BLAST of CmaCh01G011070 vs. ExPASy TrEMBL
Match: Q0D6W3 (Os07g0434200 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0434200 PE=4 SV=1)

HSP 1 Score: 1212.2 bits (3135), Expect = 0.0e+00
Identity = 614/1041 (58.98%), Postives = 750/1041 (72.05%), Query Frame = 0

Query: 1    MTGARSAFSELDSGIRGTVKFGDGSVVEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANL 60
            MTG+R+AFS++D+ + G V+ GDGS+V I GR TILF  K GEH  L   Y++P L AN+
Sbjct: 171  MTGSRAAFSDIDTNVTGNVRLGDGSLVRIGGRRTILFACKNGEHHMLHKAYYLPCLAANI 230

Query: 61   VSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRLYILELEIDQPVSLSAKTEEV 120
            +S+GQLDETG  + +E G++++ D Q RLL +  RT  RLY+L++ + +PV L A+  E 
Sbjct: 231  ISVGQLDETGFKVLVEDGVMRVWDEQHRLLARITRTPGRLYVLDINLARPVYLMARAGED 290

Query: 121  SWRWHARYGHLNFPALEKLQKKELVHGLPEIKGVNKLCDGCLIGKQRRTPFPSRTAYRAD 180
            +WRWHAR+GH+NF AL K+ ++ LV GLP +  V ++C+ CL GKQRR PFP +  +RA 
Sbjct: 291  AWRWHARFGHVNFTALRKMGREALVRGLPVLSQVEQVCEACLAGKQRRAPFPQQALHRAT 350

Query: 181  EPLELVHGDTCGPIKPATPGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKARAEA 240
            EPL L+HGD CGP+ PATP G   F LLVDD SR+MWL LL  K  A +A+KR++A AE 
Sbjct: 351  EPLALLHGDLCGPVMPATPSGNRYFPLLVDDYSRYMWLVLLATKDAAPDAMKRVQAAAER 410

Query: 241  ECEKKMRVLRTDRGGEFTSASFSKYCDEVGIQRHLTAPYSPQQNGVVERRNQTIVGTARS 300
            +  +K+R LRTDRGGEFT   F++YC E+G++R LTAPYSPQQNGVVERRNQ++V TARS
Sbjct: 411  KSGRKLRALRTDRGGEFTVGHFTEYCAELGLRRELTAPYSPQQNGVVERRNQSVVSTARS 470

Query: 301  LLVTAGMPGRFWGEAVMTAVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCVAYMK 360
            +L   G+PG FWGEAV TAVYLLNR  ++S+DGKTPYE W    P VHH R FGCVA++K
Sbjct: 471  MLKAKGLPGMFWGEAVNTAVYLLNRCSSKSIDGKTPYELWNGVTPAVHHLRTFGCVAHVK 530

Query: 361  VTRPHLAKLDPRGLKVVFIGYEPGSKAYRLYDPVGGRAHVSRDVVFDESTFWQWNDVIEA 420
            VT P   KLD R   ++F+GYE GSKAYR+YDP   R HVSRDVVFDE   W W D   A
Sbjct: 531  VTAP-TKKLDDRSRPMIFVGYELGSKAYRVYDPATRRVHVSRDVVFDEEAQWNW-DGEAA 590

Query: 421  DRNPNQFTVEYLV-----------TEPEEGGAQHQETSPPPAGAPP-------EPVEFAT 480
                + FT+EY             T  E GGA     SP     P         PVEF +
Sbjct: 591  TNVDSDFTIEYTTVYHPATATPTQTGTEHGGAPASPRSPASGSTPTTPPVAEVSPVEFVS 650

Query: 481  -PRTADSTLDADHDTDLEARYRRMDDLVGGGEPPGLAARELEEVAELHAVSADEPNTFAE 540
             P   +  LDADHD D   R+RR+DD++G   PPG A REL E  EL AV+A+EP +FAE
Sbjct: 651  PPPDVEDDLDADHD-DAPLRFRRIDDVLGPATPPGQAVRELSE--ELFAVTAEEPASFAE 710

Query: 541  AEKNPCWRKAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLV 600
            AE+  CWR+AM EEM SI  N+TW L D     R IGLKWV+K K++  G + K+KARLV
Sbjct: 711  AEQLSCWRQAMIEEMRSIEANKTWRLVDPLARQRPIGLKWVYKAKKDAAGNITKYKARLV 770

Query: 601  AKGYVQKQGVDFEEVFAPVARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVR 660
            AKGYVQ+QG+DF+EVFAPVARLESVR LLA AA   W VHHMDVKSAFLNGEL E VYV 
Sbjct: 771  AKGYVQRQGIDFDEVFAPVARLESVRLLLAHAACEGWAVHHMDVKSAFLNGELLEEVYVA 830

Query: 661  QPPGFLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDSTLLSLNFKRCASEHGMYTYGHGK 720
            QPPGF+ +   +KVLRL KALYGLRQAPRAW +KLD++LLSL F R  SEH +Y  G G+
Sbjct: 831  QPPGFVVDGQEHKVLRLDKALYGLRQAPRAWYSKLDASLLSLGFHRSDSEHAVYMRGTGE 890

Query: 721  KRLIVGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDLGVLSYYLGIEVQQNSSGISICQ 780
            +RL+VGVYVDDLIITGG+ G L +FK+EM   F+MSDLG+L YYLG+EV Q   GI++ Q
Sbjct: 891  QRLVVGVYVDDLIITGGNPGELKQFKEEMKGTFQMSDLGLLQYYLGLEVNQTEDGITVNQ 950

Query: 781  SAYARKLLDTTGLVDSNPTRTPMEARLQLRKAGTTTTVDSTNYRSIVGSLRYLVNSRPDL 840
             AYA K+L T G+V SNP+ TPME RL+L K     +VD+T+YR IVGSLRYLVNSRPDL
Sbjct: 951  RAYAEKILQTAGMVASNPSLTPMETRLKLSKMSNAPSVDATDYRWIVGSLRYLVNSRPDL 1010

Query: 841  AYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVRYCAGSEKEKLKLVGYSDSDMAG 900
            AYSVGYVSRFME P  EHL AVKR+LRYVAG+  +G  Y     K+   LVGYSDSD+AG
Sbjct: 1011 AYSVGYVSRFMEKPTTEHLAAVKRVLRYVAGSIGYGCHY---KRKKDASLVGYSDSDLAG 1070

Query: 901  DVDDRKSTSGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAASMAATQGIWLARLMEEII 960
            DVD RKSTSG+ +FL    I WQS KQKVVALSSCEAEYIAA+ AA QG+WLARL+ E+ 
Sbjct: 1071 DVDTRKSTSGVFFFLGDNLITWQSQKQKVVALSSCEAEYIAATTAACQGVWLARLLAELQ 1130

Query: 961  GRESDPPMLYIDNKATISLIKNPVLHDRSKHIEIRFHYIRECADRGLIKIDFIRTEEQLG 1020
            G E+D   L IDN++ I L KNPV HDRSKHI+ R+HYIREC + G +K++FI T EQL 
Sbjct: 1131 GEEADAVTLRIDNQSAIMLSKNPVFHDRSKHIDTRYHYIRECIEEGRVKVEFIGTNEQLA 1190

Query: 1021 DIFTKSLARVKFEELRSKIGV 1023
            DI TKSL R +F ELRS+IG+
Sbjct: 1191 DILTKSLGRDRFMELRSQIGL 1203

BLAST of CmaCh01G011070 vs. NCBI nr
Match: CAE03692.2 (OSJNBb0026E15.10 [Oryza sativa Japonica Group])

HSP 1 Score: 1330.9 bits (3443), Expect = 0.0e+00
Identity = 655/1037 (63.16%), Postives = 801/1037 (77.24%), Query Frame = 0

Query: 1    MTGARSAFSELDSGIRGTVKFGDGSVVEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANL 60
            MTG+RSAF+ELD+ + GTV+FGDGSVV IEGR T+LF  + GEHR +  VY+IPRL AN+
Sbjct: 405  MTGSRSAFAELDTAVTGTVRFGDGSVVRIEGRVTVLFSCRFGEHRGIAGVYYIPRLTANI 464

Query: 61   VSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRLYILELEIDQPVSLSAKTEEV 120
            VSLGQLD +G  + I  G+L + D +  LL + RR+ + LY ++L+ID+PV L+A++ E 
Sbjct: 465  VSLGQLDRSGSKVLIHHGILHVWDPRGHLLVRVRRSDDCLYTIKLDIDRPVCLAARSAEP 524

Query: 121  SWRWHARYGHLNFPALEKLQKKELVHGLPEIKGVNKLCDGCLIGKQRRTPFPSRTAYRAD 180
            +WRWHARYGHLNFPAL KL ++E+V GLP ++ V ++CDGCL+GKQRR  FP+++ YRAD
Sbjct: 525  AWRWHARYGHLNFPALRKLAQQEMVRGLPLLQQVTQVCDGCLLGKQRRAAFPTQSKYRAD 584

Query: 181  EPLELVHGDTCGPIKPATPGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKARAEA 240
            E LELVHGD CGPI+PATP G   FLLLVDD SR+MWLT++++K EAA A+K  +ARAE 
Sbjct: 585  EHLELVHGDLCGPIEPATPAGNRYFLLLVDDMSRYMWLTMIRSKDEAANAIKHFQARAEV 644

Query: 241  ECEKKMRVLRTDRGGEFTSASFSKYCDEVGIQRHLTAPYSPQQNGVVERRNQTIVGTARS 300
            E  +K+R LR DRG EFTS  F +YC  +G+ R LTAPYSPQQNGVVERRNQTIV TARS
Sbjct: 645  ESGRKLRALRMDRGSEFTSIEFGEYCANLGVGRQLTAPYSPQQNGVVERRNQTIVATARS 704

Query: 301  LLVTAGMPGRFWGEAVMTAVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCVAYMK 360
            ++   G+PGRFWGEA+ TAV+LLNRSPT+SLD +TPYEAWY + P VH  R FGCV ++K
Sbjct: 705  MMKAKGVPGRFWGEAMSTAVFLLNRSPTKSLDNQTPYEAWYGQWPAVHFLRTFGCVGHVK 764

Query: 361  VTRPHLAKLDPRGLKVVFIGYEPGSKAYRLYDPVGGRAHVSRDVVFDESTFWQWNDVI-E 420
            +T+P L KLD R   +V +GYE GSKAYRLYDPV  R HVSRDVVFDE   W W  V  +
Sbjct: 765  ITKPGLKKLDDRSAPMVLLGYEQGSKAYRLYDPVSERVHVSRDVVFDEDIAWDWGPVTPD 824

Query: 421  ADRNPNQFTVEYLVT--------------EPEEGGAQHQETSPPPAGAPPEPVEFATPRT 480
                   FTVE +VT               P         T  PP+   PE VEF TP T
Sbjct: 825  GAPQLEPFTVEQVVTTTIGTAPASSPTPPSPPSPAPSAPTTPAPPSPPSPEAVEFVTPPT 884

Query: 481  ADSTLDADHDTDLEARYRRMDDLVGGGEPPGLAARELEEVAELHAVSADEPNTFAEAEKN 540
             DS LDAD D D+  RYR +D+L+G   PPG A R LE++ ELH VSADEP + AEAE +
Sbjct: 885  QDSILDADADDDVVPRYRLVDNLLGNASPPGHAPRVLEQL-ELHVVSADEPASLAEAEAD 944

Query: 541  PCWRKAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGY 600
            P WR AMQ+E+ +I +N TWSL D+P GHRAIGLKWV+KLKR+E+G +V++KARLVAKGY
Sbjct: 945  PSWRGAMQDELNAIVDNDTWSLTDLPHGHRAIGLKWVYKLKRDEQGAIVRYKARLVAKGY 1004

Query: 601  VQKQGVDFEEVFAPVARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPG 660
            VQ+QGVDF+EVFA VARLESVR LLA+AAH  W+VHHMDVKSAFLNGEL E VYV QPPG
Sbjct: 1005 VQRQGVDFDEVFALVARLESVRLLLAVAAHQGWQVHHMDVKSAFLNGELLEEVYVSQPPG 1064

Query: 661  FLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDSTLLSLNFKRCASEHGMYTYGHGKKRLI 720
            F+D+++ NKV RLHKALYGLRQAPRAWNAKLDS+LLSL F R +SEHG+YT   G +RL+
Sbjct: 1065 FVDDNHKNKVYRLHKALYGLRQAPRAWNAKLDSSLLSLGFHRSSSEHGVYTRTRGGRRLM 1124

Query: 721  VGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDLGVLSYYLGIEVQQNSSGISICQSAYA 780
            VGVYVDDLIITG     +  FK EM K F+MSDLG L YYLGIEV Q+S GI++ Q+AYA
Sbjct: 1125 VGVYVDDLIITGDHDDEIRSFKGEMMKLFKMSDLGALRYYLGIEVTQDSDGITLGQAAYA 1184

Query: 781  RKLLDTTGLVDSNPTRTPMEARLQLRKAGTTTTVDSTNYRSIVGSLRYLVNSRPDLAYSV 840
             K+L+  GL D NP +TPME RL+LRK      VD+T YRS+VGSLRYLVN+RPDLA+SV
Sbjct: 1185 GKILEKAGLKDCNPCQTPMEVRLKLRKGSDFPLVDATLYRSLVGSLRYLVNTRPDLAFSV 1244

Query: 841  GYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVRYCAGSEKEKLKLVGYSDSDMAGDVDD 900
            GYVSRFME+PRE+HL AV+RILRYVAGTR WG+R+  G+      LVGYSDSD+AGD D+
Sbjct: 1245 GYVSRFMESPREDHLAAVRRILRYVAGTRCWGIRFGPGARCALPMLVGYSDSDLAGDPDE 1304

Query: 901  RKSTSGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAASMAATQGIWLARLMEEIIGRES 960
            RKSTSG I+F++GG + WQS+KQKVVALSSCEAEYIAA+ A  QG+WLARL+ E++G E 
Sbjct: 1305 RKSTSGQIFFINGGPVTWQSSKQKVVALSSCEAEYIAAAAATCQGVWLARLLAEVLGDEI 1364

Query: 961  DPPMLYIDNKATISLIKNPVLHDRSKHIEIRFHYIRECADRGLIKIDFIRTEEQLGDIFT 1020
              P+L +DN++TISLIKNPV HDRSKHI++++HYIRECA++ LI++ F+ T EQLGDIFT
Sbjct: 1365 TAPLLKVDNQSTISLIKNPVHHDRSKHIDVKYHYIRECAEKKLIEMMFVGTAEQLGDIFT 1424

Query: 1021 KSLARVKFEELRSKIGV 1023
            KSL R +F+ELRSKIGV
Sbjct: 1425 KSLGRTRFQELRSKIGV 1440

BLAST of CmaCh01G011070 vs. NCBI nr
Match: CAH66352.1 (OSIGBa0135C09.3 [Oryza sativa])

HSP 1 Score: 1294.3 bits (3348), Expect = 0.0e+00
Identity = 643/1038 (61.95%), Postives = 785/1038 (75.63%), Query Frame = 0

Query: 1    MTGARSAFSELDSGIRGTVKFGDGSVVEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANL 60
            MTG+RSAF++LD+ + GTV+FGDGSVV IEGRGT+LF  + GEHR +  VY+IPRL AN+
Sbjct: 338  MTGSRSAFAKLDTAVTGTVRFGDGSVVRIEGRGTVLFSCRFGEHRGIAGVYYIPRLTANI 397

Query: 61   VSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRLYILELEIDQPVSLSAKTEEV 120
            VSLGQLD +G  + I  G+L++ D +  LL + RR+ + LY ++L ID+PV L+A++ + 
Sbjct: 398  VSLGQLDRSGSKVLIHHGVLRVWDPRGHLLVRVRRSDDCLYTIKLNIDRPVYLAARSAKP 457

Query: 121  SWRWHARYGHLNFPALEKLQKKELVHGLPEIKGVNKLCDGCLIGKQRRTPFPSRTAYRAD 180
            +WRWHARYGHLNFP+L KL ++E+V GLP ++ V ++CDGCL+GKQRR  FP+++ YRAD
Sbjct: 458  AWRWHARYGHLNFPSLRKLAQQEMVRGLPLLQQVTQVCDGCLLGKQRRAAFPTQSKYRAD 517

Query: 181  EPLELVHGDTCGPIKPATPGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKARAEA 240
            E LELVHGD CGPI+PATP G   FLLLVDD SR+MWLTL+++K EAA A+K  +A AE 
Sbjct: 518  EHLELVHGDLCGPIEPATPAGNRYFLLLVDDMSRYMWLTLIRSKDEAANAIKHFQAHAEV 577

Query: 241  ECEKKMRVLRTDRGGEFTSASFSKYCDEVGIQRHLTAPYSPQQNGVVERRNQTIVGTARS 300
            E  +K+R LRTDRGGEFTS  F +YC  + + R LTAPYSPQQNGVVERRNQTIV TARS
Sbjct: 578  ESGRKLRALRTDRGGEFTSIEFGEYCANLRVGRQLTAPYSPQQNGVVERRNQTIVATARS 637

Query: 301  LLVTAGMPGRFWGEAVMTAVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCVAYMK 360
            ++   G+PGRFWGEA+ TAV+LLNRSPT+SLD +TPYEAWY ++P VH  R FGCV ++K
Sbjct: 638  MMKAKGVPGRFWGEAMSTAVFLLNRSPTKSLDNQTPYEAWYGQRPAVHFLRTFGCVGHVK 697

Query: 361  VTRPHLAKLDPRGLKVVFIGYEPGSKAYRLYDPVGGRAHVSRDVVFDESTFWQWNDVIEA 420
            +T+P L KLD R   +V +GYE GSKAYRLYDPV  R HVSRDVVFDE   W W   +  
Sbjct: 698  ITKPGLKKLDDRSAPMVLLGYEQGSKAYRLYDPVSERVHVSRDVVFDEDAAWDWGP-LTP 757

Query: 421  DRNP--NQFTVEYLVT--------------EPEEGGAQHQETSPPPAGAPPEPVEFATPR 480
            D  P    FTVE +VT               P         T  PP+   PE VEF TP 
Sbjct: 758  DGAPQLEPFTVEQVVTTTIGTAPASSLTPPSPPSPAPSAPTTPAPPSPPSPEAVEFVTPP 817

Query: 481  TADSTLDADHDTDLEARYRRMDDLVGGGEPPGLAARELEEVAELHAVSADEPNTFAEAEK 540
            T DS LDAD D D+  RY  +D+L+G   PPG A R LE++ ELH VSADEP + AEAE 
Sbjct: 818  TQDSILDADADDDVVPRYHLVDNLLGNASPPGHAPRVLEQL-ELHVVSADEPASLAEAEA 877

Query: 541  NPCWRKAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKG 600
            +P WR AMQ+E+ +I +N TWSL D+P GHRAIGLKW                ARLVAKG
Sbjct: 878  DPNWRGAMQDELNAIVDNDTWSLTDLPHGHRAIGLKW----------------ARLVAKG 937

Query: 601  YVQKQGVDFEEVFAPVARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPP 660
            YVQ+QGVDF+EVFAPVARLE VR LLAIAAH  W+VHHMDVKSAFLNGEL E VYV QPP
Sbjct: 938  YVQRQGVDFDEVFAPVARLELVRLLLAIAAHQGWQVHHMDVKSAFLNGELLEEVYVSQPP 997

Query: 661  GFLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDSTLLSLNFKRCASEHGMYTYGHGKKRL 720
            GF+D+++ NKV RLHKALYGLRQAPRAWN KLDS+LLSL F R +SEHG+YT   G +RL
Sbjct: 998  GFVDDNHKNKVYRLHKALYGLRQAPRAWNTKLDSSLLSLGFHRSSSEHGVYTRTRGGRRL 1057

Query: 721  IVGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDLGVLSYYLGIEVQQNSSGISICQSAY 780
             VGVYVDDLIITG     +  FK EM K F+MSDLG L YYLGIEV Q+S GI++ Q+AY
Sbjct: 1058 TVGVYVDDLIITGDHDDEIRSFKGEMMKLFKMSDLGALRYYLGIEVTQDSDGITLGQAAY 1117

Query: 781  ARKLLDTTGLVDSNPTRTPMEARLQLRKAGTTTTVDSTNYRSIVGSLRYLVNSRPDLAYS 840
            A K+L+  GL D NP +TPME RL+LRK      VD+T YRS+VGSLRYLVN+RPDLA+S
Sbjct: 1118 AGKILEKAGLKDCNPCQTPMEVRLKLRKGSDFPLVDATLYRSLVGSLRYLVNTRPDLAFS 1177

Query: 841  VGYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVRYCAGSEKEKLKLVGYSDSDMAGDVD 900
            VGYVSRFME+PRE+HL AV+RILRYVAGTR WG+R+  G+      LVGYSDSD+AGD D
Sbjct: 1178 VGYVSRFMESPREDHLAAVRRILRYVAGTRCWGIRFGPGARCALPMLVGYSDSDLAGDPD 1237

Query: 901  DRKSTSGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAASMAATQGIWLARLMEEIIGRE 960
            +RKSTSG I+F++GG + WQS+K+KVVALSSCEAEYIAA+    QG+WLARL+ E++G E
Sbjct: 1238 ERKSTSGQIFFINGGPVTWQSSKKKVVALSSCEAEYIAAAATTCQGVWLARLLAEVLGDE 1297

Query: 961  SDPPMLYIDNKATISLIKNPVLHDRSKHIEIRFHYIRECADRGLIKIDFIRTEEQLGDIF 1020
               P+L +DN++TISLIKNPV HDRSKHI++++HYIRECA++ LI++ F+ T EQLGDIF
Sbjct: 1298 IAAPLLKVDNQSTISLIKNPVHHDRSKHIDVKYHYIRECAEKKLIEMMFVGTAEQLGDIF 1357

Query: 1021 TKSLARVKFEELRSKIGV 1023
            TKSL R +F+ELRSKIGV
Sbjct: 1358 TKSLGRTRFQELRSKIGV 1357

BLAST of CmaCh01G011070 vs. NCBI nr
Match: BAF23632.1 (Os08g0389500 [Oryza sativa Japonica Group])

HSP 1 Score: 1261.1 bits (3262), Expect = 0.0e+00
Identity = 628/1055 (59.53%), Postives = 778/1055 (73.74%), Query Frame = 0

Query: 1    MTGARSAFSELDSGIRGTVKFGDGSVVEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANL 60
            MTG RSAFSEL++GIRGTVKFGDGSVV IEGRGT+LF  K GEH+ L  VY IPRL  N+
Sbjct: 399  MTGTRSAFSELNTGIRGTVKFGDGSVVGIEGRGTVLFKCKDGEHQALEGVYHIPRLTTNI 458

Query: 61   VSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRLYILELEIDQPVSLSAKTEEV 120
            VSLGQLDE     S E G+LKI + QRRLL +  R+ NRLY+++L I +PV L+A+  ++
Sbjct: 459  VSLGQLDEEKFKWSCEDGVLKIWNKQRRLLAKVVRSPNRLYVVKLNIGRPVCLAAQGGDI 518

Query: 121  SWRWHARYGHLNFPALEKLQKKELVHGLPEIKGVNKLCDGCLIGKQRRTPFPSRTAYRAD 180
            +WRWHAR+GHLNF ALEKL +  +V GLP I  V+++CD CL+GKQRR PFPS+  YRA 
Sbjct: 519  AWRWHARFGHLNFRALEKLGRAVMVRGLPLINHVDQVCDSCLVGKQRRLPFPSKAKYRAK 578

Query: 181  EPLELVHGDTCGPIKPATPGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKARAEA 240
            E LELVHGD CGP+ PATP G  LFLLLVDD SR+MWL LL +K +A+ A+KR  A AEA
Sbjct: 579  EKLELVHGDICGPVTPATPSGNKLFLLLVDDLSRYMWLILLSSKDQASVAIKRFLACAEA 638

Query: 241  ECEKKMRVLRTDRGGEFTSASFSKYCDEVGIQRHLTAPYSPQQNGVVERRNQTIVGTARS 300
            E  +K+R LRTDRGGEFT+ +F++YC E GIQRHLTAPY+PQQNGVVERRNQT++G ARS
Sbjct: 639  EAGRKLRTLRTDRGGEFTAHAFAEYCAEHGIQRHLTAPYTPQQNGVVERRNQTVMGMARS 698

Query: 301  LLVTAGMPGRFWGEAVMTAVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCVAYMK 360
            ++    +PG FWGEAV TAV+LLNR+PT+ +DGKTP+E W+  KP VH  R FGCVA++K
Sbjct: 699  MMKAKSLPGWFWGEAVNTAVFLLNRAPTQCVDGKTPFEVWHGVKPPVHFLRTFGCVAHVK 758

Query: 361  VTRPHLAKLDPRGLKVVFIGYEPGSKAYRLYDPVGGRAHVSRDVVFDESTFWQWNDVIEA 420
                 LAKLD R + +VF+GYE G+KAYR Y+PV  R HVSRD VF+E   W+W     A
Sbjct: 759  NGGQRLAKLDDRSMPMVFVGYEAGTKAYRFYNPVSRRVHVSRDAVFEEERSWEWGAEKGA 818

Query: 421  --DRNPNQFTVEYLVTEPE-EGG-------AQHQETSPP--------------------- 480
              D +   F VE+L T P  +GG       A  + TS P                     
Sbjct: 819  GPDDDIEPFVVEHLATGPTGQGGPVAATPTATQRSTSAPAPMAPPATPSQAGTPTHGAGP 878

Query: 481  --PAGAPPEPVEFATPRTADSTLDADHDTDLEARYRRMDDLVGGGEPPGLAARELEEVAE 540
              PA A    +EFA+P   D  LD DHD D+  R+R +D+L+G   PPGLA RE+ E   
Sbjct: 879  RTPASASSPAIEFASPPQGDLDLDNDHDDDVPLRFRTVDNLLGASSPPGLAEREVTE--G 938

Query: 541  LHAVSADEPNTFAEAEKNPCWRKAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKR 600
            L     DEP T  EA++   WR+AM EEM SI  N+TWSL ++P G RAIGLKWVFK+K+
Sbjct: 939  LMVAIEDEPATAEEAKQVKEWREAMIEEMASIEHNKTWSLVELPAGQRAIGLKWVFKIKK 998

Query: 601  NEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPVARLESVRFLLAIAAHHSWEVHHMDVKS 660
            +E G + KHKARLVAKGYVQ+QG+D+EEVFAPVAR+ESVR LLA+AAH SW VHHMDVKS
Sbjct: 999  DEHGNITKHKARLVAKGYVQRQGIDYEEVFAPVARIESVRVLLAVAAHRSWSVHHMDVKS 1058

Query: 661  AFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDSTLLSLNFKR 720
            AFLNG+L E VYV+QPPGF+   +  KVL+LHKALYGL+QAPRAWN+KLDS+LL L F R
Sbjct: 1059 AFLNGDLAEEVYVQQPPGFVAAGHERKVLKLHKALYGLKQAPRAWNSKLDSSLLMLGFAR 1118

Query: 721  CASEHGMYTYGHGKKRLIVGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDLGVLSYYLG 780
               EHG+YT   G+KRL+VG+YVDDLIITGG   V+  FK EM   F MSDLGVLSYYLG
Sbjct: 1119 SECEHGLYTRSDGEKRLVVGIYVDDLIITGGSTEVINTFKTEMKTLFRMSDLGVLSYYLG 1178

Query: 781  IEVQQNSSGISICQSAYARKLLDTTGLVDSNPTRTPMEARLQLRKAGTTTTVDSTNYRSI 840
            IEV+Q   GI + Q+AYA+K+L+  G+   NP  TPMEARL+L K  T+  VD+T YRS+
Sbjct: 1179 IEVRQGRRGIELLQAAYAKKILEKAGMGTCNPCATPMEARLKLSKQSTSPAVDATEYRSL 1238

Query: 841  VGSLRYLVNSRPDLAYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVRYCAGSEKE 900
            +GSLRYL+N+RPD+A++VGY+SRFME PR+EHL A+K +LRYVAGT D+G+ Y +G    
Sbjct: 1239 IGSLRYLMNTRPDMAFAVGYLSRFMENPRQEHLAAMKHLLRYVAGTIDYGLVYTSGD--T 1298

Query: 901  KLKLVGYSDSDMAGDVDDRKSTSGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAASMAA 960
            +  LVGYSDSDMAGD+DDRKSTSG+IYFL G  + WQS KQ+VVALSSCEAEYIA + AA
Sbjct: 1299 EFNLVGYSDSDMAGDIDDRKSTSGIIYFLGGNPVAWQSQKQRVVALSSCEAEYIAGAAAA 1358

Query: 961  TQGIWLARLMEEIIGRESDPPMLYIDNKATISLIKNPVLHDRSKHIEIRFHYIRECADRG 1020
             QG+WL RL+++++G    PP L +DN++ I+L KNPVLHDRSKHI+ +FH++REC D G
Sbjct: 1359 CQGVWLRRLLQDVVGVSGPPPQLKMDNQSAIALSKNPVLHDRSKHIDTKFHFLRECVDSG 1418

Query: 1021 LIKIDFIRTEEQLGDIFTKSLARVKFEELRSKIGV 1023
             +++ F+ T+ QL DI TK+L R KF+ELR  IGV
Sbjct: 1419 AVRLAFVSTQAQLADIMTKALGRSKFQELRELIGV 1449

BLAST of CmaCh01G011070 vs. NCBI nr
Match: AQA29583.1 (reverse transcriptase [Zea mays])

HSP 1 Score: 1236.9 bits (3199), Expect = 0.0e+00
Identity = 622/1065 (58.40%), Postives = 762/1065 (71.55%), Query Frame = 0

Query: 1    MTGARSAFSELDSGIRGTVKFGDGSVVEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANL 60
            MTG+R  FSELDSG+ GTVKFGDGSVV IEG+GT+LF  + GEHR+L  VY+IPRL  N+
Sbjct: 575  MTGSRHVFSELDSGVTGTVKFGDGSVVNIEGKGTVLFALRSGEHRRLDGVYYIPRLMTNI 634

Query: 61   VSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRLYILELEIDQPVSLSAKTEEV 120
            VSLGQ+DE G  + IE G+L++ D QRRLL                        AK    
Sbjct: 635  VSLGQMDEEGLKVVIEEGVLRLFDLQRRLL------------------------AKRGSA 694

Query: 121  SWRWHARYGHLNFPALEKLQKKELVHGLPEIKGVNKLCDGCLIGKQRRTPFPSRTAYRAD 180
            +WRWH RYGHLNF AL KL+++E+V GLP I  V+++C+ C++ KQ+R PFP    YRA 
Sbjct: 695  TWRWHERYGHLNFQALRKLEREEMVRGLPSIDRVDQVCEDCILAKQKRAPFPQAAKYRAQ 754

Query: 181  EPLELVHGDTCGPIKPATPGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKARAEA 240
            E LELVHGD CGPI P TP G + FLLLVDD SRFMWLTLL++K++A   +   +AR E 
Sbjct: 755  EELELVHGDLCGPISPPTPTGNAYFLLLVDDMSRFMWLTLLRSKADAPSTIMLFQARVER 814

Query: 241  ECEKKMRVLRTDRGGEFTSASFSKYCDEVGIQRHLTAPYSPQQNGVVERRNQTIVGTARS 300
            EC KK++VLRTD GGEFTS  F ++C   GIQRH +APY+PQQNGVVERRNQ +V TARS
Sbjct: 815  ECGKKLKVLRTDNGGEFTSVQFGEHCAGEGIQRHFSAPYTPQQNGVVERRNQMVVSTARS 874

Query: 301  LLVTAGMPGRFWGEAVMTAVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCVAYMK 360
            +L   GMPG FWGEAV TAV+LLNR+PT +L+G+TPY+AWY KKP VH  +VFGCVAY+K
Sbjct: 875  ILRARGMPGHFWGEAVHTAVFLLNRAPTAALNGRTPYQAWYGKKPAVHFLKVFGCVAYIK 934

Query: 361  VTRPHLAKLDPRGLKVVFIGYEPGSKAYRLYDPVGGRAHVSRDVVFDESTFWQWNDVIE- 420
              RPHL+KL+ RG KVVFIGY+ GSKAYR YDPV  R HVSRD VF+E     W   I+ 
Sbjct: 935  RPRPHLSKLEDRGQKVVFIGYQDGSKAYRFYDPVTERVHVSRDAVFNEGARLDWGGAIDT 994

Query: 421  ADRNPNQFTVEY------------------------LVTEPEEGGAQHQET--------- 480
             D +P     EY                        L   P         T         
Sbjct: 995  VDMHPFTVAEEYELRHQQVEGSALEPISPEARTPAPLALSPRSASTPSTPTPHTVSPTAP 1054

Query: 481  -------SPPPAGAPPEPVEFATPRTADSTLDADHDTDLEARYRRMDDLVGGGEPPGLAA 540
                   SP    AP   ++FATP + D + DAD   +L  RYR +D++   G  PGL  
Sbjct: 1055 STSATASSPSTPQAPRTHIKFATPLSTDPSFDADDVGEL--RYRTLDNIHSVGAAPGLVH 1114

Query: 541  RELEEVAELHAVSADEPNTFAEAEKNPCWRKAMQEEMTSITENQTWSLEDMPPGHRAIGL 600
             + +E AELH VS +EP T  EA+ +P W  AM+EE+ SI +N+TWSL ++P GHRAIGL
Sbjct: 1115 HD-DEHAELHVVSVEEPRTLKEADGDPNWVAAMEEELASIRDNKTWSLAELPHGHRAIGL 1174

Query: 601  KWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPVARLESVRFLLAIAAHHSWE 660
            KWV+K+KR+E   +VK+KARLVAKGYVQ+ GVDF+EVFAPVAR ESVR LLAIAAH+ W 
Sbjct: 1175 KWVYKVKRDENDNIVKYKARLVAKGYVQQPGVDFDEVFAPVARQESVRLLLAIAAHYGWG 1234

Query: 661  VHHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDST 720
            VHHMDVKSAFLNGEL+E VYV+QPPGF+D  +  KVLRLHKALYGLRQAPRAWN KLD+ 
Sbjct: 1235 VHHMDVKSAFLNGELQEEVYVQQPPGFVDERHKYKVLRLHKALYGLRQAPRAWNQKLDAE 1294

Query: 721  LLSLNFKRCASEHGMYTYGHGKKRLIVGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDL 780
            LL+L F RC +EHGMYT G G+ RLIVGVYVDDLIITGGD G + +FK +M K F+MSDL
Sbjct: 1295 LLALGFARCVNEHGMYTRGKGEARLIVGVYVDDLIITGGDAGAVAKFKVQMQKIFKMSDL 1354

Query: 781  GVLSYYLGIEVQQNSSGISICQSAYARKLLDTTGLVDSNPTRTPMEARLQLRKAGTTTTV 840
            G+LSYYLG+EV Q + GI++ QSAYA K+L+  GL   N + TPME +L+L K GTT +V
Sbjct: 1355 GLLSYYLGLEVTQGAQGITLRQSAYATKVLEKAGLAGCNASATPMEPKLKLLKEGTTPSV 1414

Query: 841  DSTNYRSIVGSLRYLVNSRPDLAYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVR 900
            D T YRS++GSLRYL NSRPDLAY VGY+SRFMEAPR+EHL AVKR+LRYVAGT  WG+ 
Sbjct: 1415 DVTEYRSLIGSLRYLCNSRPDLAYPVGYLSRFMEAPRQEHLAAVKRVLRYVAGTLHWGLH 1474

Query: 901  Y-CAGSEKEKLKLVGYSDSDMAGDVDDRKSTSGMIYFLSGGAICWQSTKQKVVALSSCEA 960
            Y  +G  +   +L+GYSDSD+AGDV+DRKSTSG+I+FL+GG + WQS KQKVVALSSCEA
Sbjct: 1475 YHPSGKNEGAPQLLGYSDSDLAGDVNDRKSTSGLIFFLAGGPVAWQSAKQKVVALSSCEA 1534

Query: 961  EYIAASMAATQGIWLARLMEEIIGRESDPPMLYIDNKATISLIKNPVLHDRSKHIEIRFH 1020
            EYIAA+ AA + +WLARL+ E+IG     P L +DNK+ I+L+KNPV HDRSKHI+++FH
Sbjct: 1535 EYIAAAAAACEAVWLARLLAELIGGAVLAPKLKVDNKSAIALMKNPVHHDRSKHIDVKFH 1594

Query: 1021 YIRECADRGLIKIDFIRTEEQLGDIFTKSLARVKFEELRSKIGVQ 1024
            +IREC DR LI ++F+ TE QLGDI TK+L R +  ELR  I ++
Sbjct: 1595 FIRECCDRKLIDVEFVGTELQLGDILTKALGRTRLHELRGLIDMK 1612

BLAST of CmaCh01G011070 vs. NCBI nr
Match: BAF21410.1 (Os07g0434200, partial [Oryza sativa Japonica Group])

HSP 1 Score: 1212.2 bits (3135), Expect = 0.0e+00
Identity = 614/1041 (58.98%), Postives = 750/1041 (72.05%), Query Frame = 0

Query: 1    MTGARSAFSELDSGIRGTVKFGDGSVVEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANL 60
            MTG+R+AFS++D+ + G V+ GDGS+V I GR TILF  K GEH  L   Y++P L AN+
Sbjct: 171  MTGSRAAFSDIDTNVTGNVRLGDGSLVRIGGRRTILFACKNGEHHMLHKAYYLPCLAANI 230

Query: 61   VSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRLYILELEIDQPVSLSAKTEEV 120
            +S+GQLDETG  + +E G++++ D Q RLL +  RT  RLY+L++ + +PV L A+  E 
Sbjct: 231  ISVGQLDETGFKVLVEDGVMRVWDEQHRLLARITRTPGRLYVLDINLARPVYLMARAGED 290

Query: 121  SWRWHARYGHLNFPALEKLQKKELVHGLPEIKGVNKLCDGCLIGKQRRTPFPSRTAYRAD 180
            +WRWHAR+GH+NF AL K+ ++ LV GLP +  V ++C+ CL GKQRR PFP +  +RA 
Sbjct: 291  AWRWHARFGHVNFTALRKMGREALVRGLPVLSQVEQVCEACLAGKQRRAPFPQQALHRAT 350

Query: 181  EPLELVHGDTCGPIKPATPGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKARAEA 240
            EPL L+HGD CGP+ PATP G   F LLVDD SR+MWL LL  K  A +A+KR++A AE 
Sbjct: 351  EPLALLHGDLCGPVMPATPSGNRYFPLLVDDYSRYMWLVLLATKDAAPDAMKRVQAAAER 410

Query: 241  ECEKKMRVLRTDRGGEFTSASFSKYCDEVGIQRHLTAPYSPQQNGVVERRNQTIVGTARS 300
            +  +K+R LRTDRGGEFT   F++YC E+G++R LTAPYSPQQNGVVERRNQ++V TARS
Sbjct: 411  KSGRKLRALRTDRGGEFTVGHFTEYCAELGLRRELTAPYSPQQNGVVERRNQSVVSTARS 470

Query: 301  LLVTAGMPGRFWGEAVMTAVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCVAYMK 360
            +L   G+PG FWGEAV TAVYLLNR  ++S+DGKTPYE W    P VHH R FGCVA++K
Sbjct: 471  MLKAKGLPGMFWGEAVNTAVYLLNRCSSKSIDGKTPYELWNGVTPAVHHLRTFGCVAHVK 530

Query: 361  VTRPHLAKLDPRGLKVVFIGYEPGSKAYRLYDPVGGRAHVSRDVVFDESTFWQWNDVIEA 420
            VT P   KLD R   ++F+GYE GSKAYR+YDP   R HVSRDVVFDE   W W D   A
Sbjct: 531  VTAP-TKKLDDRSRPMIFVGYELGSKAYRVYDPATRRVHVSRDVVFDEEAQWNW-DGEAA 590

Query: 421  DRNPNQFTVEYLV-----------TEPEEGGAQHQETSPPPAGAPP-------EPVEFAT 480
                + FT+EY             T  E GGA     SP     P         PVEF +
Sbjct: 591  TNVDSDFTIEYTTVYHPATATPTQTGTEHGGAPASPRSPASGSTPTTPPVAEVSPVEFVS 650

Query: 481  -PRTADSTLDADHDTDLEARYRRMDDLVGGGEPPGLAARELEEVAELHAVSADEPNTFAE 540
             P   +  LDADHD D   R+RR+DD++G   PPG A REL E  EL AV+A+EP +FAE
Sbjct: 651  PPPDVEDDLDADHD-DAPLRFRRIDDVLGPATPPGQAVRELSE--ELFAVTAEEPASFAE 710

Query: 541  AEKNPCWRKAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLV 600
            AE+  CWR+AM EEM SI  N+TW L D     R IGLKWV+K K++  G + K+KARLV
Sbjct: 711  AEQLSCWRQAMIEEMRSIEANKTWRLVDPLARQRPIGLKWVYKAKKDAAGNITKYKARLV 770

Query: 601  AKGYVQKQGVDFEEVFAPVARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVR 660
            AKGYVQ+QG+DF+EVFAPVARLESVR LLA AA   W VHHMDVKSAFLNGEL E VYV 
Sbjct: 771  AKGYVQRQGIDFDEVFAPVARLESVRLLLAHAACEGWAVHHMDVKSAFLNGELLEEVYVA 830

Query: 661  QPPGFLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDSTLLSLNFKRCASEHGMYTYGHGK 720
            QPPGF+ +   +KVLRL KALYGLRQAPRAW +KLD++LLSL F R  SEH +Y  G G+
Sbjct: 831  QPPGFVVDGQEHKVLRLDKALYGLRQAPRAWYSKLDASLLSLGFHRSDSEHAVYMRGTGE 890

Query: 721  KRLIVGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDLGVLSYYLGIEVQQNSSGISICQ 780
            +RL+VGVYVDDLIITGG+ G L +FK+EM   F+MSDLG+L YYLG+EV Q   GI++ Q
Sbjct: 891  QRLVVGVYVDDLIITGGNPGELKQFKEEMKGTFQMSDLGLLQYYLGLEVNQTEDGITVNQ 950

Query: 781  SAYARKLLDTTGLVDSNPTRTPMEARLQLRKAGTTTTVDSTNYRSIVGSLRYLVNSRPDL 840
             AYA K+L T G+V SNP+ TPME RL+L K     +VD+T+YR IVGSLRYLVNSRPDL
Sbjct: 951  RAYAEKILQTAGMVASNPSLTPMETRLKLSKMSNAPSVDATDYRWIVGSLRYLVNSRPDL 1010

Query: 841  AYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVRYCAGSEKEKLKLVGYSDSDMAG 900
            AYSVGYVSRFME P  EHL AVKR+LRYVAG+  +G  Y     K+   LVGYSDSD+AG
Sbjct: 1011 AYSVGYVSRFMEKPTTEHLAAVKRVLRYVAGSIGYGCHY---KRKKDASLVGYSDSDLAG 1070

Query: 901  DVDDRKSTSGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAASMAATQGIWLARLMEEII 960
            DVD RKSTSG+ +FL    I WQS KQKVVALSSCEAEYIAA+ AA QG+WLARL+ E+ 
Sbjct: 1071 DVDTRKSTSGVFFFLGDNLITWQSQKQKVVALSSCEAEYIAATTAACQGVWLARLLAELQ 1130

Query: 961  GRESDPPMLYIDNKATISLIKNPVLHDRSKHIEIRFHYIRECADRGLIKIDFIRTEEQLG 1020
            G E+D   L IDN++ I L KNPV HDRSKHI+ R+HYIREC + G +K++FI T EQL 
Sbjct: 1131 GEEADAVTLRIDNQSAIMLSKNPVFHDRSKHIDTRYHYIRECIEEGRVKVEFIGTNEQLA 1190

Query: 1021 DIFTKSLARVKFEELRSKIGV 1023
            DI TKSL R +F ELRS+IG+
Sbjct: 1191 DILTKSLGRDRFMELRSQIGL 1203

BLAST of CmaCh01G011070 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 364.4 bits (934), Expect = 3.2e-100
Identity = 197/504 (39.09%), Postives = 300/504 (59.52%), Query Frame = 0

Query: 513  ADEPNTFAEAEKNPCWRKAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGE 572
            A EP+T+ EA++   W  AM +E+ ++    TW +  +PP  + IG KWV+K+K N  G 
Sbjct: 83   AKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGT 142

Query: 573  VVKHKARLVAKGYVQKQGVDFEEVFAPVARLESVRFLLAIAAHHSWEVHHMDVKSAFLNG 632
            + ++KARLVAKGY Q++G+DF E F+PV +L SV+ +LAI+A +++ +H +D+ +AFLNG
Sbjct: 143  IERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNG 202

Query: 633  ELKETVYVRQPPGFL----DNDNPNKVLRLHKALYGLRQAPRAWNAKLDSTLLSLNFKRC 692
            +L E +Y++ PPG+     D+  PN V  L K++YGL+QA R W  K   TL+   F + 
Sbjct: 203  DLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQS 262

Query: 693  ASEHGMYTYGHGKKRLIVGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDLGVLSYYLGI 752
             S+H  +        L V VYVDD+II   +   +   K ++   F++ DLG L Y+LG+
Sbjct: 263  HSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGL 322

Query: 753  EVQQNSSGISICQSAYARKLLDTTGLVDSNPTRTPMEARLQLRKAGTTTTVDSTNYRSIV 812
            E+ ++++GI+ICQ  YA  LLD TGL+   P+  PM+  +          VD+  YR ++
Sbjct: 323  EIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLI 382

Query: 813  GSLRYLVNSRPDLAYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVRYCAGSEKEK 872
            G L YL  +R D++++V  +S+F EAPR  H  AV +IL Y+ GT   G+ Y   S + +
Sbjct: 383  GRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFY---SSQAE 442

Query: 873  LKLVGYSDSDMAGDVDDRKSTSGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAASMAAT 932
            ++L  +SD+      D R+ST+G   FL    I W+S KQ+VV+ SS EAEY A S A  
Sbjct: 443  MQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATD 502

Query: 933  QGIWLARLMEEIIGRESDPPMLYIDNKATISLIKNPVLHDRSKHIEIRFHYIRE-CADRG 992
            + +WLA+   E+    S P +L+ DN A I +  N V H+R+KHIE   H +RE    + 
Sbjct: 503  EMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQA 562

Query: 993  LIKIDFIRTEEQLGDIFTKSLARV 1012
             +   F   +EQ  D FT+ L+ +
Sbjct: 563  TLSYSFQAYDEQ--DGFTEYLSPI 581

BLAST of CmaCh01G011070 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 151.0 bits (380), Expect = 5.6e-36
Identity = 81/225 (36.00%), Postives = 128/225 (56.89%), Query Frame = 0

Query: 708 VYVDDLIITGGDVGVLGRFKKEMSKNFEMSDLGVLSYYLGIEVQQNSSGISICQSAYARK 767
           +YVDD+++TG    +L     ++S  F M DLG + Y+LGI+++ + SG+ + Q+ YA +
Sbjct: 5   LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 768 LLDTTGLVDSNPTRTPMEARLQLRKAGTTTTVDSTNYRSIVGSLRYLVNSRPDLAYSVGY 827
           +L+  G++D  P  TP+  +L      T    D +++RSIVG+L+YL  +RPD++Y+V  
Sbjct: 65  ILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNI 124

Query: 828 VSRFMEAPREEHLVAVKRILRYVAGTRDWGVRYCAGSEKEKLKLVGYSDSDMAGDVDDRK 887
           V + M  P       +KR+LRYV GT   G+      +  KL +  + DSD AG    R+
Sbjct: 125 VCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYI---HKNSKLNVQAFCDSDWAGCTSTRR 184

Query: 888 STSGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAASMAATQGIW 933
           ST+G   FL    I W + +Q  V+ SS E EY A ++ A +  W
Sbjct: 185 STTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

BLAST of CmaCh01G011070 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 87.4 bits (215), Expect = 7.6e-17
Identity = 42/99 (42.42%), Postives = 64/99 (64.65%), Query Frame = 0

Query: 515 EPNTFAEAEKNPCWRKAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVV 574
           EP +   A K+P W +AMQEE+ +++ N+TW L   P     +G KWVFK K +  G + 
Sbjct: 27  EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86

Query: 575 KHKARLVAKGYVQKQGVDFEEVFAPVARLESVRFLLAIA 614
           + KARLVAKG+ Q++G+ F E ++PV R  ++R +L +A
Sbjct: 87  RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

BLAST of CmaCh01G011070 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 68.9 bits (167), Expect = 2.8e-11
Identity = 36/95 (37.89%), Postives = 52/95 (54.74%), Query Frame = 0

Query: 291 NQTIVGTARSLLVTAGMPGRFWGEAVMTAVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHF 350
           N+TI+   RS+L   G+P  F  +A  TAV+++N+ P+ +++   P E W+   PT  + 
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 351 RVFGCVAYMKVTRPHLAKLDPRGLKVVFIGYEPGS 386
           R FGCVAY+        KL PR  K    G E GS
Sbjct: 62  RRFGCVAYIHCDE---GKLKPRAKK----GEEKGS 89

BLAST of CmaCh01G011070 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 58.2 bits (139), Expect = 5.0e-08
Identity = 32/79 (40.51%), Postives = 47/79 (59.49%), Query Frame = 0

Query: 813 YLVNSRPDLAYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRDWGVRYCAGSEKEKLKLV 872
           YL  +RPDL ++V  +S+F  A R   + AV ++L YV GT   G+ Y A S+   L+L 
Sbjct: 2   YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSD---LQLK 61

Query: 873 GYSDSDMAGDVDDRKSTSG 892
            ++DSD A   D R+S +G
Sbjct: 62  AFADSDWASCPDTRRSVTG 77

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P109783.2e-18538.17Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041466.5e-15431.63Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Q94HW22.3e-15131.72Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT941.9e-14530.95Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P256006.0e-5137.38Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... [more]
Match NameE-valueIdentityDescription
Q7XPB10.0e+0063.16OSJNBb0026E15.10 protein OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBb0026E... [more]
A0B9X70.0e+0061.95OSIGBa0135C09.3 protein OS=Oryza sativa OX=4530 GN=OSIGBa0135C09.3 PE=4 SV=1[more]
Q0J5Y30.0e+0059.53Os08g0389500 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0389500 PE... [more]
A0A1P8YYM30.0e+0058.40Reverse transcriptase OS=Zea mays OX=4577 GN=FGENESH_28 PE=4 SV=1[more]
Q0D6W30.0e+0058.98Os07g0434200 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os07... [more]
Match NameE-valueIdentityDescription
CAE03692.20.0e+0063.16OSJNBb0026E15.10 [Oryza sativa Japonica Group][more]
CAH66352.10.0e+0061.95OSIGBa0135C09.3 [Oryza sativa][more]
BAF23632.10.0e+0059.53Os08g0389500 [Oryza sativa Japonica Group][more]
AQA29583.10.0e+0058.40reverse transcriptase [Zea mays][more]
BAF21410.10.0e+0058.98Os07g0434200, partial [Oryza sativa Japonica Group][more]
Match NameE-valueIdentityDescription
AT4G23160.13.2e-10039.09cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.15.6e-3636.00DNA/RNA polymerases superfamily protein [more]
ATMG00820.17.6e-1742.42Reverse transcriptase (RNA-dependent DNA polymerase) [more]
ATMG00710.12.8e-1137.89Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
ATMG00240.15.0e-0840.51Gag-Pol-related retrotransposon family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 221..241
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 437..471
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 51..864
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 872..1010
e-value: 3.61914E-70
score: 228.122
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 542..785
e-value: 4.8E-98
score: 327.6
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 174..352
e-value: 3.5E-43
score: 149.2
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 99..166
e-value: 1.6E-15
score: 56.7
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 181..281
e-value: 6.3E-12
score: 45.7
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 178..344
score: 26.910288
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 181..353
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 542..978

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh01G011070.1CmaCh01G011070.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding