CmaCh01G010650 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh01G010650
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionheterogeneous nuclear ribonucleoprotein 1-like
LocationCma_Chr01: 7883658 .. 7886841 (-)
RNA-Seq ExpressionCmaCh01G010650
SyntenyCmaCh01G010650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCATTACCCTCTTTCAGTTCGGAATTCCACTGAAAACCTAAATCAACGATCTTTCATCTTCTTCTCCACGTCTCATCGATCTTCTTCGACAACGCATCCGCCAGCCAAATTCCTCATGGCGTCCAAATCGAAGAGCGAAAATCCTCACACCGGCGATGGCGCTAGCCCCGGGTTTGTTTCTTTTCCTTTCTCAATTTTTATTTTCTTTCGGTGCTTCTCTGAAAAAGTTTGATGAGTTGGGGAAAAGGGCTTTCTTAAGTGCCAGATTCCATTATTATATGTCATCCCCCTCTCGGGCCTGTCAAACAGTTCCTTTGTCTTGATTTTCTTTAGATCTCGATTTTGTGTTCTCACTTTTTTGCTATTTTTGTTTTCCCAGGAAGATTTTCATCGGAGGATTGGCGAAGGATACAACTTACAGTGAGTTTTTGTTTTCTTTTAATCATGTATTAGGGACGAGTTTCTGTACCCATGTTTAATTCTGCTGAAATTACCTGTTATTCTTGATGGGTGTTCATATTTTGAATGGCTAGCTTAGCACCTCTTCTATTGCGGTTCATTGATAATTAAATAAATTCTTGATTTGCTAATTCTGTATATTGATTAAGTGCAATTTAGCTTAGATTCGGCTACAGCTGATGGTCTTTTTCATTGTGTTCTTGGAAAAATTAGCTCAATTCAACAAGCATTTTGGTGATTATGGAGAGATAACGGACTCGGTGATCATGAAGGATCGGTATACCGGACAACCAAGAGGTTTTGGGTTTATTACTTATGCTGATCCTTCTGTGGTTGACAAGGTTATCGAAGATACACACGTCATCAATGGAAAACAGGTACGTCATCTTAATTATTTTGTTTTTCTTCTTCCTGCTAACTGGCTTACACCACATTATATTCTGCTGGATTGTTGAATGGCGTAAAATGTTTTTGTTTCCCGTGGTCTTATGAGGTTAATTATTAGTCTTTTTCTGTATTTTATTGGATGGTTTATAATCATACAGTTGTAATATGTTTGTTGTTGCATGAATTTATGCTTTATTTATTTTATTTCTGGGATTTACTTTGCTAAATGGAGATAGGTTGAAATCAAGAGAACCATCCCGAAAGGACAAGGTCAATCAAAGGATTTTAAGACGAAGAAGATATTTGTTGGTGGGATTCCATCAACGGTTACTGAAGGTAAGGTTATTGAGTTATATGTTGAAGCGTGTTCTTTATTGGCAGGACCAGTGTTTGTTTCAGCCACTTTTTATCTGTTCTTCTCATATTGATGTAGTTTCTATGTTGTGTTTTAATATGTTTATTACGTATCTTGCTTGTAGATGAGTTAAAACATTTCTTTTCCAAGTTTGGGAAAGTTGTGGAACACCAAATTATACGTGACCATGAAACCAACCGTTCGCGAGGCTTTGGGTTTATAGTTTTTGACGAGGAAGAAGTTGTAGATGAAATTTTATCCAAAGGAAATATGATAGATATGTCTGGTACCCAGGTGAGCTTATATAAATGGACCGCAAGTGAGCAAAGTGTAAACCAAATTGTGTTTCCCATGGGTTTTGCACCATCGTATTTTCCAGTTTTAATAATAATGGACAATTTTCAACCCTTTCACTTTATACAATCGTATCTTTTAAGTATTATGCGATTAGCTACTTCTTTTTGCTACTAATTTTAGGTTGAGGTTATACAGGTATAGATCTTCTAAGGCAAGGGCTATCAGAATAGTTAAATTGCAGAAGATCTAGGTTAACTAAGTTACTTTGTTGTAGGTGGAGATCAAGAAAGCTGAACCAAAGAAATCCTCAAACCCACCACCTGCTCCTGCATATGGTAGCAATTCTAGGGCTCGTTCATTCAATGATGGCTTTGGTGGATATGGTGGTTCTTATGGGGACTTTGATGCAGGCTTTGGACCTGGTCCCTTTAGGACTGCAGGTGGTCTTGGTGGTAGGATTGGGGGTGGCTATGGTTATGGTAGTGGTGGTGACTTTGGTGGTGGTTATGGAGGTTTTGGAAGCAGTAGCTTAGGTGGCTACCGAGGTGAATCATCCCTTGGTTATTCTAGTCGATTTGGTCCTTACAGTGGTGGGTTTGGTGGGGGTTATGGCACAAGTGGCTTAGGAGGATATGGTCGAGGGGTTGATGGCTATGGGAGCTATGGAGGTTCAGGTTACGGTGGAGGTTATGACTCAGGTCCTGGTGCTAGTTACGGAGGAGCAGGTGGTTTGTATGGAAGGGGAGGCTATAGTGGGAGTAGTCGATACCATCCCTATGCAAGGTAGAATCGTTGCGTAGTCAGTACCATCCATCTCCTTGGAAGCTAGAACAGAAGTCTCACTCGAATGCTGTCTCGCCTAAGAATTGCCATAGAGTTTTTCAAACACACAGGTTCCTTTAGTTTTGTGGCCCAGTGATAGGCAGTGTTCTCTCACAAACACTAGAGGTCCAAGGATGCTTTGGAAAAAGACGAGAAGAGTGTATTAGACTTTTTATTGTATGGTTTTAGACACTATTATGTAGACTACACTGCTGCAAGCTAGTTTATGCCTAATATGGTTGTCCCCATCTAGTACAATTTCAATGTAGTGTGCTGTGCTCTGCTGTAGGCTTTAGCATACACTTATTTCTTGGTTATGTTTATTTGTCACGTTAGTTCGATAAACTAGATAGAGATATTAGATGTATGTTATTTCCTAACACGCCCTAGTAGTCTTATACTCTTTATTTTAGTTTACAGAACCTGATAGACACAGGAAGAGTAAAATATAATCCTCCCAGTTCTTACTGATAGTTTTAGGGGAGCGAGCGGGAAATGTAGGACGACGAACATCACGTTTATCGATATGTTGATTAGATAGATAGAGGATTGTTGTTTTGATATTGAGATTAATTTATTATGTTCTTGGCCTTTTGAGTGCTATGCTGAAGCTGTACTGGTGGTTGCCATGGAAGCTATTTCTGTAACTTTTTAGCTTACTTTAGGGTCTCCAATTATTTATCCAGAAATTGGGGGTTTTTTTTTTTCCTTCTAATGATTTCAGGGTAAATAATAGAGAAGCCAGGTTACATGCACAATTGAAGTCTCTGTAATTTCTTCATTAATTTTTTATTTTATAATGAAGTTTATTTGTTAATTAAGTTCATTAGCTATCAAATTGATTGTTGTGTTTGAGTTTTATT

mRNA sequence

TTCATTACCCTCTTTCAGTTCGGAATTCCACTGAAAACCTAAATCAACGATCTTTCATCTTCTTCTCCACGTCTCATCGATCTTCTTCGACAACGCATCCGCCAGCCAAATTCCTCATGGCGTCCAAATCGAAGAGCGAAAATCCTCACACCGGCGATGGCGCTAGCCCCGGGAAGATTTTCATCGGAGGATTGGCGAAGGATACAACTTACACTCAATTCAACAAGCATTTTGGTGATTATGGAGAGATAACGGACTCGGTGATCATGAAGGATCGGTATACCGGACAACCAAGAGGTTTTGGGTTTATTACTTATGCTGATCCTTCTGTGGTTGACAAGGTTATCGAAGATACACACGTCATCAATGGAAAACAGGTTGAAATCAAGAGAACCATCCCGAAAGGACAAGGTCAATCAAAGGATTTTAAGACGAAGAAGATATTTGTTGGTGGGATTCCATCAACGGTTACTGAAGATGAGTTAAAACATTTCTTTTCCAAGTTTGGGAAAGTTGTGGAACACCAAATTATACGTGACCATGAAACCAACCGTTCGCGAGGCTTTGGGTTTATAGTTTTTGACGAGGAAGAAGTTGTAGATGAAATTTTATCCAAAGGAAATATGATAGATATGTCTGGTACCCAGGTGGAGATCAAGAAAGCTGAACCAAAGAAATCCTCAAACCCACCACCTGCTCCTGCATATGGTAGCAATTCTAGGGCTCGTTCATTCAATGATGGCTTTGGTGGATATGGTGGTTCTTATGGGGACTTTGATGCAGGCTTTGGACCTGGTCCCTTTAGGACTGCAGGTGGTCTTGGTGGTAGGATTGGGGGTGGCTATGGTTATGGTAGTGGTGGTGACTTTGGTGGTGGTTATGGAGGTTTTGGAAGCAGTAGCTTAGGTGGCTACCGAGGTGAATCATCCCTTGGTTATTCTAGTCGATTTGGTCCTTACAGTGGTGGGTTTGGTGGGGGTTATGGCACAAGTGGCTTAGGAGGATATGGTCGAGGGGTTGATGGCTATGGGAGCTATGGAGGTTCAGGTTACGGTGGAGGTTATGACTCAGGTCCTGGTGCTAGTTACGGAGGAGCAGGTGGTTTGTATGGAAGGGGAGGCTATAGTGGGAGTAGTCGATACCATCCCTATGCAAGGTAGAATCGTTGCGTAGTCAGTACCATCCATCTCCTTGGAAGCTAGAACAGAAGTCTCACTCGAATGCTGTCTCGCCTAAGAATTGCCATAGAGTTTTTCAAACACACAGGTTCCTTTAGTTTTGTGGCCCAGTGATAGGCAGTGTTCTCTCACAAACACTAGAGGTCCAAGGATGCTTTGGAAAAAGACGAGAAGAGTGTATTAGACTTTTTATTGTATGGTTTTAGACACTATTATGTAGACTACACTGCTGCAAGCTAGTTTATGCCTAATATGGTTGTCCCCATCTAGTACAATTTCAATGTAGTGTGCTGTGCTCTGCTGTAGGCTTTAGCATACACTTATTTCTTGGTTATGTTTATTTGTCACGTTAGTTCGATAAACTAGATAGAGATATTAGATGTATGTTATTTCCTAACACGCCCTAGTAGTCTTATACTCTTTATTTTAGTTTACAGAACCTGATAGACACAGGAAGAGTAAAATATAATCCTCCCAGTTCTTACTGATAGTTTTAGGGGAGCGAGCGGGAAATGTAGGACGACGAACATCACGTTTATCGATATGTTGATTAGATAGATAGAGGATTGTTGTTTTGATATTGAGATTAATTTATTATGTTCTTGGCCTTTTGAGTGCTATGCTGAAGCTGTACTGGTGGTTGCCATGGAAGCTATTTCTGTAACTTTTTAGCTTACTTTAGGGTCTCCAATTATTTATCCAGAAATTGGGGGTTTTTTTTTTTCCTTCTAATGATTTCAGGGTAAATAATAGAGAAGCCAGGTTACATGCACAATTGAAGTCTCTGTAATTTCTTCATTAATTTTTTATTTTATAATGAAGTTTATTTGTTAATTAAGTTCATTAGCTATCAAATTGATTGTTGTGTTTGAGTTTTATT

Coding sequence (CDS)

ATGGCGTCCAAATCGAAGAGCGAAAATCCTCACACCGGCGATGGCGCTAGCCCCGGGAAGATTTTCATCGGAGGATTGGCGAAGGATACAACTTACACTCAATTCAACAAGCATTTTGGTGATTATGGAGAGATAACGGACTCGGTGATCATGAAGGATCGGTATACCGGACAACCAAGAGGTTTTGGGTTTATTACTTATGCTGATCCTTCTGTGGTTGACAAGGTTATCGAAGATACACACGTCATCAATGGAAAACAGGTTGAAATCAAGAGAACCATCCCGAAAGGACAAGGTCAATCAAAGGATTTTAAGACGAAGAAGATATTTGTTGGTGGGATTCCATCAACGGTTACTGAAGATGAGTTAAAACATTTCTTTTCCAAGTTTGGGAAAGTTGTGGAACACCAAATTATACGTGACCATGAAACCAACCGTTCGCGAGGCTTTGGGTTTATAGTTTTTGACGAGGAAGAAGTTGTAGATGAAATTTTATCCAAAGGAAATATGATAGATATGTCTGGTACCCAGGTGGAGATCAAGAAAGCTGAACCAAAGAAATCCTCAAACCCACCACCTGCTCCTGCATATGGTAGCAATTCTAGGGCTCGTTCATTCAATGATGGCTTTGGTGGATATGGTGGTTCTTATGGGGACTTTGATGCAGGCTTTGGACCTGGTCCCTTTAGGACTGCAGGTGGTCTTGGTGGTAGGATTGGGGGTGGCTATGGTTATGGTAGTGGTGGTGACTTTGGTGGTGGTTATGGAGGTTTTGGAAGCAGTAGCTTAGGTGGCTACCGAGGTGAATCATCCCTTGGTTATTCTAGTCGATTTGGTCCTTACAGTGGTGGGTTTGGTGGGGGTTATGGCACAAGTGGCTTAGGAGGATATGGTCGAGGGGTTGATGGCTATGGGAGCTATGGAGGTTCAGGTTACGGTGGAGGTTATGACTCAGGTCCTGGTGCTAGTTACGGAGGAGCAGGTGGTTTGTATGGAAGGGGAGGCTATAGTGGGAGTAGTCGATACCATCCCTATGCAAGGTAG

Protein sequence

MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTEDELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEIKKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIGGGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRGVDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Homology
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BLAST of CmaCh01G010650 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 4.9e-39
Identity = 138/396 (34.85%), Postives = 203/396 (51.26%), Query Frame = 0 

Query: 19  GKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIE 78
           GK+F+GG++ +T   +  +HF +YGE++ +++M+D+ TG+PRGFGF+ ++DPSV+D+V++
Sbjct: 6   GKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQ 65

Query: 79  DTHVINGKQVEIKRTI----------------PKGQGQSKDFKTKKIFVGGIPSTVTEDE 138
           + H I+ ++V++KR +                 +  G     KTKKIFVGG+P T+T++E
Sbjct: 66  EKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTDEE 125

Query: 139 LKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEIKK 198
            + +F  +G V +  I+ D  TNR RGFGF+ FD E+ VD +L K    D+SG QVE+K+
Sbjct: 126 FRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHK-TFHDLSGKQVEVKR 185

Query: 199 AEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLG------ 258
           A PK ++     P  G  S     + G+ GYGG+   +D       F     +G      
Sbjct: 186 ALPKDAN-----PGGGGRSMGGGGSGGYQGYGGNESSYDGRMDSNRFLQHQSVGNGLPSY 245

Query: 259 GRIGGGYGYGSGGDFGGGYGGFG--SSSLGGYRGESSLGYSSRFGPYSG----------- 318
           G  G G GYG+G + G GYG +G  + S GGY   ++ GY +   P +G           
Sbjct: 246 GSSGYGAGYGNGSN-GAGYGAYGGYTGSAGGYGAGATAGYGATNIPGAGYGSSTGVAPRN 305

Query: 319 -------------GFGGGYGTSGLG------------GYGRGVDGYGSYGG--SGYG--- 345
                        G+G G   SG G            GY     GYG Y G  SGYG   
Sbjct: 306 SWDTPASSGYGNPGYGSGAAHSGYGVPGAAPPTQSPSGYSNQGYGYGGYSGSDSGYGNQA 365

[Close]
BLAST of CmaCh01G010650 vs. ExPASy Swiss-Prot
Match: P21522 (Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog OS=Schistocerca americana OX=7009 GN=HNRNP PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 5.8e-32
Identity = 141/351 (40.17%), Postives = 186/351 (52.99%), Query Frame = 0 

Query: 8   ENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPRGFGFITY 67
           EN H G+     K+FIGGL   TT     +HF  +GEI D V+MKD  T + RGFGFITY
Sbjct: 7   ENDH-GEPEHVRKLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITY 66

Query: 68  ADPSVVDKVIE-DTHVINGKQVEIKRTIPKGQ-GQSKDFKT-KKIFVGGIPSTVTEDELK 127
           +   +VD       H ++G+ VE KR +P+ + G+ +   T KK+FVGGI   + E++L+
Sbjct: 67  SRAHMVDDAQNARPHKVDGRVVEPKRAVPRTEIGRPEAGATVKKLFVGGIKEEMEENDLR 126

Query: 128 HFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEI-LSKGNMIDMSGTQVEIKKA 187
            +F ++G VV   I+ D ET + RGF F+ FD+ + VD+I LS+ + I   G  +++KKA
Sbjct: 127 DYFKQYGTVVSAAIVVDKETRKKRGFAFVEFDDYDPVDKICLSRNHQI--RGKHIDVKKA 186

Query: 188 EPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPG---------PFRTA-- 247
            PK  +        G   R        GG+GG  GD+    G G         P+     
Sbjct: 187 LPKGDA----PGGRGGGGRGGVGGGAGGGWGGGRGDWGGSAGGGGGGGWGGADPWENGRG 246

Query: 248 ------GGLGGRIGGGYGYGSGGDFGGG--YGGFGSSSLGGYRGESSLGYSSRFGPYSGG 307
                 GG GG +GGG  +G GG  GGG  YGG G  S GG+   S+ GY+S  GP S G
Sbjct: 247 GGGDRWGGGGGGMGGGDRWGGGGGMGGGDRYGGGGGRS-GGW---SNDGYNS--GPQSDG 306

Query: 308 FGGGYGTSGLGGYGRGVDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGG 336
           FGGGY  S  GG  RG  GYG    + Y    D G   S GG GG YG GG
Sbjct: 307 FGGGYKQSYGGGAVRGSSGYGGSRSAPYS---DRG---SRGGGGGGYGSGG 338

[Close]
BLAST of CmaCh01G010650 vs. ExPASy Swiss-Prot
Match: P51991 (Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens OX=9606 GN=HNRNPA3 PE=1 SV=2)

HSP 1 Score: 135.6 bits (340), Expect = 1.1e-30
Identity = 129/340 (37.94%), Postives = 175/340 (51.47%), Query Frame = 0 

Query: 20  KIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVI-E 79
           K+FIGGL+ +TT     +HF  +G +TD V+M+D  T + RGFGF+TY+    VD  +  
Sbjct: 36  KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95

Query: 80  DTHVINGKQVEIKRTIPKGQG--QSKDFKTKKIFVGGIPSTVTEDELKHFFSKFGKVVEH 139
             H ++G+ VE KR + +            KKIFVGGI     E  L+ +F K+GK+   
Sbjct: 96  RPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETI 155

Query: 140 QIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEIKKAEPKKSSNPPPAPA 199
           +++ D ++ + RGF F+ FD+ + VD+I+ +     ++G   E+KKA  K+        +
Sbjct: 156 EVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQ-KYHTINGHNCEVKKALSKQEMQ-----S 215

Query: 200 YGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIGGGYG-YGSGGDFG--G 259
            GS            G GG  G+F             G GG  GGG G +G GG+FG  G
Sbjct: 216 AGSQR----------GRGGGSGNF------------MGRGGNFGGGGGNFGRGGNFGGRG 275

Query: 260 GYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRGVDGYGSYGGS-GY 319
           GYGG G  S G Y G    GY+  FG   G +GGG G S  GGYG G  GYG+ GG  G 
Sbjct: 276 GYGGGGGGSRGSYGGGDG-GYNG-FGGDGGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGG 335

Query: 320 GGGYD------SGPGASYGGAGGLYGRGGYSG--SSRYHP 345
           GGGYD      +  G +YGG G     G YSG   S Y P
Sbjct: 336 GGGYDGYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGP 345

[Close]
BLAST of CmaCh01G010650 vs. ExPASy Swiss-Prot
Match: P09651 (Heterogeneous nuclear ribonucleoprotein A1 OS=Homo sapiens OX=9606 GN=HNRNPA1 PE=1 SV=5)

HSP 1 Score: 134.8 bits (338), Expect = 1.9e-30
Identity = 131/340 (38.53%), Postives = 178/340 (52.35%), Query Frame = 0 

Query: 5   SKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPRGFGF 64
           SKSE+P   +     K+FIGGL+ +TT      HF  +G +TD V+M+D  T + RGFGF
Sbjct: 2   SKSESPKEPEQLR--KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGF 61

Query: 65  ITYADPSVVDKVIE-DTHVINGKQVEIKRTIPKGQGQ--SKDFKTKKIFVGGIPSTVTED 124
           +TYA    VD  +    H ++G+ VE KR + +   Q        KKIFVGGI     E 
Sbjct: 62  VTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEH 121

Query: 125 ELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEIK 184
            L+ +F ++GK+   +I+ D  + + RGF F+ FD+ + VD+I+ +     ++G   E++
Sbjct: 122 HLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQ-KYHTVNGHNCEVR 181

Query: 185 KAEPKKSSNPPPAPAYGSNSRARSFNDGF-GGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 244
           KA  K+        +  S+ R RS +  F GG GG +G  D     G F   GG GG  G
Sbjct: 182 KALSKQE-----MASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRG 241

Query: 245 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 304
           GG GYG  GD   GY GFG+   GGY G    GYS     Y  G G GYG  G  GYG G
Sbjct: 242 GG-GYGGSGD---GYNGFGND--GGY-GGGGPGYSGGSRGYGSG-GQGYGNQG-SGYG-G 301

Query: 305 VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSS 341
              Y SY   G GGG+  G G+++GG G     G Y+  S
Sbjct: 302 SGSYDSYNNGG-GGGFGGGSGSNFGGGGSYNDFGNYNNQS 322

[Close]
BLAST of CmaCh01G010650 vs. ExPASy Swiss-Prot
Match: P51992 (Heterogeneous nuclear ribonucleoprotein A3 homolog 2 OS=Xenopus laevis OX=8355 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 7.1e-30
Identity = 130/342 (38.01%), Postives = 180/342 (52.63%), Query Frame = 0 

Query: 20  KIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPRGFGFITYADPSVVD-KVIE 79
           K+FIGGL+ +TT     +HF  +G++TD V+M+D  T + RGFGF+TY+    VD  +  
Sbjct: 28  KLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSA 87

Query: 80  DTHVINGKQVEIKRTIPKGQG--QSKDFKTKKIFVGGIPSTVTEDELKHFFSKFGKVVEH 139
             H ++G+ VE KR + +            KKIFVGGI     E  L+ +F  +GK+   
Sbjct: 88  RPHKVDGRVVEPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYFEGYGKIETI 147

Query: 140 QIIRDHETNRSRGFGFIVFDEEEVVDEI-LSKGNMIDMSGTQVE--IKKAEPKKSSNPPP 199
           +++ D ++ + RGF F+ FD+ + VD+I + K + I++   +V+  + K E + +S    
Sbjct: 148 EVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINLHNCEVKKALSKQEMQTASAQRG 207

Query: 200 APAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIGGGYGYGSGGDFGG 259
               GSN   R  N G GG GG  G+F  G   G F   GG GG  G G GYG GGD   
Sbjct: 208 RGGGGSNFMGRGGNYG-GGDGGGGGNFGRG---GGFGNRGGYGGGGGRGGGYGGGGDGYN 267

Query: 260 GYGGFGSSSLGGYRGESSLGY--SSRFGPYSGGFGGGYGTSGLGGYGRGVDGY---GSYG 319
           G+GG G  + GG  G    GY  S  +G   GG+GGG G  G G  G G DGY   G++G
Sbjct: 268 GFGGDG-GNYGGGPGYGGRGYGGSPGYGNQGGGYGGGGGGGGAG--GGGYDGYNEGGNFG 327

Query: 320 GSGYG--GGYDSGPGASYG--GAGGLYGRG-GYSGSSRYHPY 346
           G  Y   G Y     ++YG   AG   GR  G SG S   PY
Sbjct: 328 GGNYNDFGSYGGQQQSNYGPMKAGNFSGRSTGGSGGSSSGPY 362

[Close]
BLAST of CmaCh01G010650 vs. ExPASy TrEMBL
Match: A0A6J1IWT7 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111480620 PE=4 SV=1)

HSP 1 Score: 662.9 bits (1709), Expect = 7.2e-187
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180
           DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240
           KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG
Sbjct: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240

Query: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
           GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of CmaCh01G010650 vs. ExPASy TrEMBL
Match: A0A6J1FLG0 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111446490 PE=4 SV=1)

HSP 1 Score: 662.9 bits (1709), Expect = 7.2e-187
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180
           DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240
           KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG
Sbjct: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240

Query: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
           GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of CmaCh01G010650 vs. ExPASy TrEMBL
Match: A0A5A7U1Z1 (Heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001410 PE=4 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 8.6e-180
Identity = 333/347 (95.97%), Postives = 340/347 (97.98%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFG+YGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180
           DE KHFFSK+GK+VEHQIIRDHETNRSRGFGFIVF+EEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240
           KKAEPKKSSNP PAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFR  GG+GGRIG
Sbjct: 181 KKAEPKKSSNPLPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240

Query: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
            GYGYGSGGDFGGGYGGFG +SLGGYRG+SSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           VDGYGSYG SGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of CmaCh01G010650 vs. ExPASy TrEMBL
Match: A0A1S3CI79 (heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo OX=3656 GN=LOC103501266 PE=4 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 8.6e-180
Identity = 333/347 (95.97%), Postives = 340/347 (97.98%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFG+YGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180
           DE KHFFSK+GK+VEHQIIRDHETNRSRGFGFIVF+EEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240
           KKAEPKKSSNP PAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFR  GG+GGRIG
Sbjct: 181 KKAEPKKSSNPLPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240

Query: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
            GYGYGSGGDFGGGYGGFG +SLGGYRG+SSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           VDGYGSYG SGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of CmaCh01G010650 vs. ExPASy TrEMBL
Match: A0A0A0K3W8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G278740 PE=4 SV=1)

HSP 1 Score: 638.3 bits (1645), Expect = 1.9e-179
Identity = 332/347 (95.68%), Postives = 340/347 (97.98%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFG+YGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180
           DE KHFFSK+GK+VEHQIIRDHETNRSRGFGFIVF+EEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240
           KKAEPKKSSNP PAPAYGSNSRAR+FNDGFGGYGGSYGDFDAGFGPGPFR  GG+GGRIG
Sbjct: 181 KKAEPKKSSNPLPAPAYGSNSRARTFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240

Query: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
            GYGYGSGGDFGGGYGGFG +SLGGYRG+SSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           VDGYGSYG SGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of CmaCh01G010650 vs. NCBI nr
Match: XP_022941092.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita moschata] >XP_022981531.1 heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita maxima] >KAG6607739.1 Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 662.9 bits (1709), Expect = 1.5e-186
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180
           DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240
           KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG
Sbjct: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240

Query: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
           GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of CmaCh01G010650 vs. NCBI nr
Match: XP_023525200.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 660.6 bits (1703), Expect = 7.4e-186
Identity = 346/347 (99.71%), Postives = 346/347 (99.71%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180
           DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240
           KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG
Sbjct: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240

Query: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
           GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           VDGYGSYGGSGY GGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGGSGYSGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of CmaCh01G010650 vs. NCBI nr
Match: KAG7037314.1 (Heterogeneous nuclear ribonucleoprotein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 656.8 bits (1693), Expect = 1.1e-184
Identity = 347/352 (98.58%), Postives = 347/352 (98.58%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGT---- 180
           DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGT    
Sbjct: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEV 180

Query: 181 -QVEIKKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGL 240
            QVEIKKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGL
Sbjct: 181 IQVEIKKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGL 240

Query: 241 GGRIGGGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLG 300
           GGRIGGGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLG
Sbjct: 241 GGRIGGGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLG 300

Query: 301 GYGRGVDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           GYGRGVDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 GYGRGVDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 352

[Close]
BLAST of CmaCh01G010650 vs. NCBI nr
Match: XP_008463022.1 (PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo] >KAA0048257.1 heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo var. makuwa] >TYK08000.1 heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 639.4 bits (1648), Expect = 1.8e-179
Identity = 333/347 (95.97%), Postives = 340/347 (97.98%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFG+YGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180
           DE KHFFSK+GK+VEHQIIRDHETNRSRGFGFIVF+EEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240
           KKAEPKKSSNP PAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFR  GG+GGRIG
Sbjct: 181 KKAEPKKSSNPLPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240

Query: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
            GYGYGSGGDFGGGYGGFG +SLGGYRG+SSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           VDGYGSYG SGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of CmaCh01G010650 vs. NCBI nr
Match: XP_004149406.1 (heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus] >KGN44390.1 hypothetical protein Csa_015841 [Cucumis sativus])

HSP 1 Score: 638.3 bits (1645), Expect = 3.9e-179
Identity = 332/347 (95.68%), Postives = 340/347 (97.98%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFG+YGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180
           DE KHFFSK+GK+VEHQIIRDHETNRSRGFGFIVF+EEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240
           KKAEPKKSSNP PAPAYGSNSRAR+FNDGFGGYGGSYGDFDAGFGPGPFR  GG+GGRIG
Sbjct: 181 KKAEPKKSSNPLPAPAYGSNSRARTFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240

Query: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
            GYGYGSGGDFGGGYGGFG +SLGGYRG+SSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           VDGYGSYG SGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of CmaCh01G010650 vs. TAIR 10
Match: AT3G13224.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 458.4 bits (1178), Expect = 5.2e-129
Identity = 266/360 (73.89%), Postives = 290/360 (80.56%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60
           M S+S+++N  +GDGASPGKIFIGGL KDTT T FNKHFG YGEITDSVIM+DR+TGQPR
Sbjct: 1   MGSRSRNDNFQSGDGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQG--QSKDFKTKKIFVGGIPSTV 120
           GFGFIT+ADPSVVDKVIEDTHVINGKQVEIKRTIPKG G  QSKD KTKKIFVGGIPSTV
Sbjct: 61  GFGFITFADPSVVDKVIEDTHVINGKQVEIKRTIPKGAGGNQSKDIKTKKIFVGGIPSTV 120

Query: 121 TEDELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQV 180
           TEDELK FF+K+G VVEHQ+IRDHETNRSRGFGF++FD EEVVDE+LSKGNMIDM+ TQV
Sbjct: 121 TEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQV 180

Query: 181 EIKKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFG--PGPFRTAGGLG 240
           EIKKAEPKKS N  P P+YGS+ R RS ND +  YGG YG FD G+G  PGP R+ GG  
Sbjct: 181 EIKKAEPKKSLNRSP-PSYGSHPRGRSSNDSYASYGGPYGGFDGGYGHPPGPIRSHGGPA 240

Query: 241 GRIGGGYGYGSGG---DFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGG-GYGTS 300
            R  GGYGYG G    +FGGGY  +G  SLGGYR E  LGYSSRFGPY  GFGG GYG  
Sbjct: 241 SRYAGGYGYGRGSVGPEFGGGYNNYGGGSLGGYRNEPPLGYSSRFGPYGSGFGGEGYGRG 300

Query: 301 GLG---GYGR-GVDGYGSYGGSGYGGGYDS-GPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           G G   GY R G +GYG YGG GYGG Y+S GPG SY GAGG YGR GYS SSRYHPYAR
Sbjct: 301 GEGAYLGYPRGGGEGYGGYGGPGYGGAYESGGPGGSYEGAGGPYGR-GYSSSSRYHPYAR 358

[Close]
BLAST of CmaCh01G010650 vs. TAIR 10
Match: AT5G40490.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 320.1 bits (819), Expect = 2.2e-87
Identity = 213/396 (53.79%), Postives = 259/396 (65.40%), Query Frame = 0 

Query: 10  PHTGDGA-SPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPRGFGFITYA 69
           PH+G G  S GKIF+GGLA++TT  +F KHFG YGEITDSVIMKDR TGQPRGFGF+TYA
Sbjct: 32  PHSGGGVDSAGKIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYA 91

Query: 70  DPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTEDELKHFFS 129
           D SVVDKVI+D H+I GKQVEIKRTIP+G   S DFKTKKIFVGGIPS+V +DE K FF 
Sbjct: 92  DSSVVDKVIQDNHIIIGKQVEIKRTIPRGSMSSNDFKTKKIFVGGIPSSVDDDEFKEFFM 151

Query: 130 KFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEIKKAEPKK- 189
           +FG++ EHQI+RDH T RSRGFGF+ ++ E++VD +L+KGN I++SGTQVEIKKAEPKK 
Sbjct: 152 QFGELKEHQIMRDHSTGRSRGFGFVTYESEDMVDHLLAKGNRIELSGTQVEIKKAEPKKP 211

Query: 190 SSNPPPAPAYGSNSRARSFNDGFG-GYGGSYGDFDAGFGPGPFRTAGGLGGRIGGGYGYG 249
           +S   P+  +G +SR+ +F  G+G GYGG +G    G G GP+++ GG GG   GGYG G
Sbjct: 212 NSVTTPSKRFG-DSRS-NFGGGYGDGYGGGHGGGYGGPG-GPYKSGGGYGGGRSGGYG-G 271

Query: 250 SGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGG---------------------- 309
            GG+FGG  GG     +G YRGE +LGYS R+G   GG                      
Sbjct: 272 YGGEFGGYGGGGYGGGVGPYRGEPALGYSGRYGGGGGGYNRGGYSMGGGGGYGGGPGDMY 331

Query: 310 -----------------FGGGYGTSGLGGYGRGVDGYGSYG------------GSGYGGG 348
                            +GGGYG+SG+GGYG G+ G G  G            G G  GG
Sbjct: 332 GGSYGEPGGGYGGPSGSYGGGYGSSGIGGYGGGMGGAGGGGYRGGGGYDMGGVGGGGAGG 391

[Close]
BLAST of CmaCh01G010650 vs. TAIR 10
Match: AT3G13224.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 310.1 bits (793), Expect = 2.3e-84
Identity = 151/184 (82.07%), Postives = 167/184 (90.76%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60
           M S+S+++N  +GDGASPGKIFIGGL KDTT T FNKHFG YGEITDSVIM+DR+TGQPR
Sbjct: 1   MGSRSRNDNFQSGDGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQG--QSKDFKTKKIFVGGIPSTV 120
           GFGFIT+ADPSVVDKVIEDTHVINGKQVEIKRTIPKG G  QSKD KTKKIFVGGIPSTV
Sbjct: 61  GFGFITFADPSVVDKVIEDTHVINGKQVEIKRTIPKGAGGNQSKDIKTKKIFVGGIPSTV 120

Query: 121 TEDELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQV 180
           TEDELK FF+K+G VVEHQ+IRDHETNRSRGFGF++FD EEVVDE+LSKGNMIDM+ TQV
Sbjct: 121 TEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQV 180

Query: 181 EIKK 183
            + K
Sbjct: 181 SLYK 184

[Close]
BLAST of CmaCh01G010650 vs. TAIR 10
Match: AT1G17640.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 195.3 bits (495), Expect = 8.2e-50
Identity = 139/343 (40.52%), Postives = 194/343 (56.56%), Query Frame = 0 

Query: 16  ASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDK 75
           +SPGK+F+GG++ +TT   F  +FG +GE+ DSVIM DR TG PRGFGF+T+AD +V +K
Sbjct: 63  SSPGKLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEK 122

Query: 76  VIEDTHVINGKQVEIKRTIPKGQGQS---KDFKTKKIFVGGIPSTVTEDELKHFFSKFGK 135
           V+E+ HVI+ ++V++KRT+P+G   +      KT+KIFVGG+P  + EDELK++F  +G 
Sbjct: 123 VLEEDHVIDDRKVDLKRTLPRGDKDTDIKAVSKTRKIFVGGLPPLLEEDELKNYFCVYGD 182

Query: 136 VVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEIKKAEPKKSSNPP 195
           ++EHQI+ DH T RSRGFGF+ F  E+ VD + S G + ++   QVEIK+AEPK++    
Sbjct: 183 IIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEPKRTGR-- 242

Query: 196 PAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIGGGYGYGSGGDFG 255
                         ++ F  YG S          G +       G+    Y   SG    
Sbjct: 243 --------------DNSFRSYGAS----------GKYDQEDSYSGKANEDYSMYSG---Y 302

Query: 256 GGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTS--------GLGGYGRGVDGY 315
           GGYGG+G+     Y G S +  +  +G Y GG+G GYG          G GGY     GY
Sbjct: 303 GGYGGYGA-----YAGNSMVNPAGFYG-YGGGYGYGYGYGGQMFNMGYGAGGYSHMGSGY 362

Query: 316 GSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           G    + YGGG   G G +   +G   G  G SG  RYHPY +
Sbjct: 363 GVAAAAAYGGGKSHGNGNNGSSSGKGNGTNG-SGPDRYHPYQK 369

[Close]
BLAST of CmaCh01G010650 vs. TAIR 10
Match: AT4G14300.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 163.3 bits (412), Expect = 3.5e-40
Identity = 138/396 (34.85%), Postives = 203/396 (51.26%), Query Frame = 0 

Query: 19  GKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIE 78
           GK+F+GG++ +T   +  +HF +YGE++ +++M+D+ TG+PRGFGF+ ++DPSV+D+V++
Sbjct: 6   GKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQ 65

Query: 79  DTHVINGKQVEIKRTI----------------PKGQGQSKDFKTKKIFVGGIPSTVTEDE 138
           + H I+ ++V++KR +                 +  G     KTKKIFVGG+P T+T++E
Sbjct: 66  EKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTDEE 125

Query: 139 LKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEIKK 198
            + +F  +G V +  I+ D  TNR RGFGF+ FD E+ VD +L K    D+SG QVE+K+
Sbjct: 126 FRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHK-TFHDLSGKQVEVKR 185

Query: 199 AEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLG------ 258
           A PK ++     P  G  S     + G+ GYGG+   +D       F     +G      
Sbjct: 186 ALPKDAN-----PGGGGRSMGGGGSGGYQGYGGNESSYDGRMDSNRFLQHQSVGNGLPSY 245

Query: 259 GRIGGGYGYGSGGDFGGGYGGFG--SSSLGGYRGESSLGYSSRFGPYSG----------- 318
           G  G G GYG+G + G GYG +G  + S GGY   ++ GY +   P +G           
Sbjct: 246 GSSGYGAGYGNGSN-GAGYGAYGGYTGSAGGYGAGATAGYGATNIPGAGYGSSTGVAPRN 305

Query: 319 -------------GFGGGYGTSGLG------------GYGRGVDGYGSYGG--SGYG--- 345
                        G+G G   SG G            GY     GYG Y G  SGYG   
Sbjct: 306 SWDTPASSGYGNPGYGSGAAHSGYGVPGAAPPTQSPSGYSNQGYGYGGYSGSDSGYGNQA 365

The following BLAST results are available for this feature:
BLAST of CmaCh01G010650 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8W0344.9e-3934.85Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP... [more]
P215225.8e-3240.17Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog OS=Schistocerca americ... [more]
P519911.1e-3037.94Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens OX=9606 GN=HNRNPA3 PE... [more]
P096511.9e-3038.53Heterogeneous nuclear ribonucleoprotein A1 OS=Homo sapiens OX=9606 GN=HNRNPA1 PE... [more]
P519927.1e-3038.01Heterogeneous nuclear ribonucleoprotein A3 homolog 2 OS=Xenopus laevis OX=8355 P... [more]
BLAST of CmaCh01G010650 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IWT77.2e-187100.00heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1FLG07.2e-187100.00heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita moschata OX=3662 GN=... [more]
A0A5A7U1Z18.6e-18095.97Heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo var. makuwa OX=1194695... [more]
A0A1S3CI798.6e-18095.97heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo OX=3656 GN=LOC10350126... [more]
A0A0A0K3W81.9e-17995.68Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G278740 PE=4 SV=1[more]
BLAST of CmaCh01G010650 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022941092.11.5e-186100.00heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita moschata] >XP_02298153... [more]
XP_023525200.17.4e-18699.71heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita pepo subsp. pepo][more]
KAG7037314.11.1e-18498.58Heterogeneous nuclear ribonucleoprotein 1 [Cucurbita argyrosperma subsp. argyros... [more]
XP_008463022.11.8e-17995.97PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo] >KAA0048257.... [more]
XP_004149406.13.9e-17995.68heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus] >KGN44390.1 hypothet... [more]
BLAST of CmaCh01G010650 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G13224.25.2e-12973.89RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G40490.12.2e-8753.79RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT3G13224.12.3e-8482.07RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT1G17640.18.2e-5040.52RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT4G14300.13.5e-4034.85RNA-binding (RRM/RBD/RNP motifs) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 108..181
e-value: 7.2E-21
score: 85.3
coord: 20..91
e-value: 1.1E-19
score: 81.4
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 21..88
e-value: 3.4E-14
score: 52.4
coord: 109..175
e-value: 1.3E-17
score: 63.4
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 107..185
score: 18.853777
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 19..95
score: 15.32331
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 19..98
e-value: 3.2E-23
score: 83.8
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 99..225
e-value: 9.8E-26
score: 92.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..201
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR48033RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEINcoord: 1..347
NoneNo IPR availablePANTHERPTHR48033:SF6RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEINcoord: 1..347
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 104..215
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 15..100

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh01G010650.1CmaCh01G010650.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010468 regulation of gene expression
cellular_component GO:0005654 nucleoplasm
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding