CmaCh01G007010 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGAAACTTAAAGCCATTGTTGATTAAAAGACTTTTGGTCCAGAAAATCATAGTCTCATATCTCAAAGTTAAACATAAGCAATGTTGCAAGTGAGTAGCCAGAGATCACACATTTATAAACTAAACGAAACAGCAACAATAATACAAATAAAAAATTAAGCAAAAGAATTCTCACCTCAATGTCCCGACCTTAGGGTAAAAACTCTAAGAAATTCGAGGACTAGAAGCTTTTGATCATCAGTTTTCTCACTAGTTTTACCACATGGAGATTCAATATTAGTAACTATTTCAAGCTCGATTCAAGAAACGTACTAAACACAAATTTGAAAGTGGAATAAAATCTAAAATTTTGAGGGACAAATTTAAAGATAAAAATGTTAAAATAGAAATTATTTGAAGTTTGGGACCAAGGAAGACCATTTTGGAAGTGGGTTCAAAAACCCTATGGTCCACTAATAAATGGGTTTAAAATCAAAGCCCATTAGGACACATTCTCGCCGTCGACTGTAAGCCGGCGACCGACGAACGAAACGACGAGCGGAACCCTTCCAAATAAGGAACAGAATCGAAAACCGCCGTCGCCAAGATCCCATCACTTCAATTGTTTTCGCCTCAAATCTCAGCTGCTGTGCAATACAAAAAGTATCGAAAGAGGTGGAAGACGCTATCCAAAGCCATGGCCGGAAGAAGCCATCAGCCGAATGCGTTGAAACGACGCAAATTTCCATTGAACCGAAGCCCGAGTGATGATCGTCGAGCCCATCAACGTCTTCCTTACTCATCTTCCGTCGGCGGTTCTTCGAGGGCTCATCAGGCAATCCTTCTCGAAGATTGGATATCAACGCAGCATCGAGAGATTCAAACTCTCCTCTCCGACAACCAACGGCTTGCAGCCACTCACGTGGCGCTCAAGCAAGAGCTAGCAGCGGCCGAGAAAGAGCTTCGGCTCTTATCGGCCACTGCGTCTAAAGTCAAGGCCGAGAGAGACGCAGAGGTGAGGGAGGTTTATGAGAAATCGCTGAAGATGGGCGCTGAGGTTCGTGCCATGGACGCTATGATGGCAGAGCTCGTTCAAGTGCGGGCGGATATACATAAGCTGAGTACCGTAAAGCAAGAGTTAACGACGGAGTTGCAAGCAATTCGCGACGACCTTTCTAAAACCTCTTCAGAGTCACAGCCATTGCCGTCTATTAAAGCTGAAATTGATAGAATGCACCATGAAATTCAAAGAGGAAGGTAAATTGTCATTTCTCCCTTAAGTTCGAAAATAAGCCTTTTCATATTAAAGCATCAATTTATTTTGAGTTGGCTTGTAAGGTTTATCCCTTTAATTGTTCTTCCTGGATTTGATTGTTTTGACACAAAATCTGTATTTGCTTAAATGTTGGGATACTCCATTCTAATTGTTCGCTAGCTGTATGTTTCTGCCGCAAATAAGATATCAAATGCAAAACCTTAATGCTGTGATGTTAATGCCTTGTCTTTCAGTATCTTTGAACATTGGTAACTACTTGAACTATTCAAAAACTCTGAAGTGCGTTCATTTGGTGCAGCTATTTCTTTGTGGATATTGCTATAGCTGTGAAGAAATGACACCCTTTCATAGTAGTATATGTTTACGTGAAAATATATACTAAAGACCATCTATCCAAAAAAAGAGAGAAAAAAAACGAGTATGTTTGTTCAAGAAAACAAGCCTAATATCTGTTCACTTGGTGCAAGACTATGTCTTGTCTAATACTAGAGCATGTATGATCTTACTTCGTGAGCAATTTATCATGTCTAGCAAAGTTTGCACAATTCTCTTCTGCACTAATATTGTGTTAAATATCCTTCGTGAATTTGCTTTAACCATTGGTATCTAGAGAATCACTTTTGTTTTCCTTTTAACAAGAAACCAATCGAATCGGGAGCTGTTAGTAGAATGAAAATATAAGCAGTTTCTTTTGAGGATCATGGGCATTTTGAAGTTTCATTGTTTTTCTATAGCCAACTCCCATGTTTCTTGTTTTTATGATTGTAGAACAAAACAACCTGAAGAAAAATTTGTGAATTGGTACAATTCTTCTTTTTAGGCAGAAGAAATGCAATGTAGTATTCTGTTTGTTTGATGAGCATAATTGAGGCTTGGGAATTACCTCTTGCTATCTGTTGTTGATCTGAACAGGGCTGCTATTGAATACGAGAAACAGACACGCGCTAGTAATCTTGAGCAGAGTGAGGCCATGGAAAAGGGTATGGTTGCCATGTCTCAGGAAGTTGAGAAATTGCAGGCTGAACTGGCCAATGCTGAGAAGAGAGCAAGGGCTGCGGCAGCTGTAACGAGTCCTTGTAAGCCTTCTTTTCATATAGCTTATGCATCCTCCTTTTTTTGCCACTTACTCTCTTTACATTGCATTTTCATACAGTTCCTGGTTATGCTGCAACTTATGGCCATCCTGACATAAGATACAGTGGGAGCTCACATCCCCCTGACCCTTATGGCATGCGTCAGGTACTCCTCCATGTCTGTATTAGTTCTATGACTCAGAAATTCATTGCAGGGCTGGTTCTACCTTGACTCTTGGTGAACACCATTAAAATTCATTGGAACATGAAGTCATCTTATAACCTAGGTTATGTTTGGGATGGCAAACGCATTTCAGACTCAATTGTTATGTTTGATAATAATATAGAAGTACTTTTGCAAAGAGTCAAAAACACCTTATAGTGTTCCTTGAAAGGGTACTTATAGAATGCTTTCAGCCTTAGTGTTGGACTAGACAGCACTCAAAAGTACTTTCAAGAGTGAAGGATAGGTCTAATCATCTAATGAATTGGTTAGTGAACACTTTATATTGAAGTGTTTGCAATCAAAACTAAAAGCATTACGAGACATATAAAACCAAATCTATGAACCAAGCAACATGGCTGCTCCTTTTCATTGACCATAAAATTGTTATAAAATTCTGCATAGGTGACTGTGAAGGTGGTTTTATGGGGTTGGGAAACATGCCCTATGCCCCCTTACAACTTAAGCAGGTGGGTTTTGGGTTTATACTATTATGATTTGCCTTCGATTAACATGTAAATATATGAGATTTTATGGGTCACATTTTCTGAGTTCAACAGAAGTGATGTTTTAACGGCTAAGCTACACTCAAATTGTCCGGTTGTGTCATACTGATGTCATTGATAAGATCTATTCAGAATGATTACCAAATTGCTTCTATCCATAATATAGAAGGATGGTTTGTTCTAGGTTCAAGGAGGAGTTGGTGTAAATATTGCCTCGCAATACGCTCACGCACCACCGACGCATGGACCCCTTTACAGCGTGCAACCAGCACCACCACACATGCAATAAACGGGCAGAGCAATGTATGGACAAATTTTGTGCTCGATGTGGAAGGAGTCTCAGTGTCCTAGACTCCATAACAGGCGGAAGGCACTGTAAATACTGCCGCAGAAGCTGTTCTTCCATCGGAGGAAGTTCTTTCGTCCAGGATCGCCGGAGAGGTATGCCACTGTCATGTACATTTTAACTTGTTAGGGGACCCTTGGCAGTTCTGAAAAGTGTTCAATATCTAAATTTTGGCATCTCTTTTGATTCACTGATTAAATTTTGGAAATATTCTTAAGCTCGTTGTAGAACCGTAATGGAAACAACAAGGTACCATTTCTTCTCATCCTTTCACATTTCATCAATTATGAAATGGAACTTGATGGGAAGAAATTAATATCCGTCTATTTCTTATTTTAGTTTCGAACGTCGTTTTAA TGAAACTTAAAGCCATTGTTGATTAAAAGACTTTTGGTCCAGAAAATCATAGTCTCATATCTCAAAGTTAAACATAAGCAATGTTGCAAGTGAGTAGCCAGAGATCACACATTTATAAACTAAACGAAACAGCAACAATAATACAAATAAAAAATTAAGCAAAAGAATTCTCACCTCAATGTCCCGACCTTAGGGTAAAAACTCTAAGAAATTCGAGGACTAGAAGCTTTTGATCATCAGTTTTCTCACTAGTTTTACCACATGGAGATTCAATATTAGTAACTATTTCAAGCTCGATTCAAGAAACGTACTAAACACAAATTTGAAAGTGGAATAAAATCTAAAATTTTGAGGGACAAATTTAAAGATAAAAATGTTAAAATAGAAATTATTTGAAGTTTGGGACCAAGGAAGACCATTTTGGAAGTGGGTTCAAAAACCCTATGGTCCACTAATAAATGGGTTTAAAATCAAAGCCCATTAGGACACATTCTCGCCGTCGACTGTAAGCCGGCGACCGACGAACGAAACGACGAGCGGAACCCTTCCAAATAAGGAACAGAATCGAAAACCGCCGTCGCCAAGATCCCATCACTTCAATTGTTTTCGCCTCAAATCTCAGCTGCTGTGCAATACAAAAAGTATCGAAAGAGGTGGAAGACGCTATCCAAAGCCATGGCCGGAAGAAGCCATCAGCCGAATGCGTTGAAACGACGCAAATTTCCATTGAACCGAAGCCCGAGTGATGATCGTCGAGCCCATCAACGTCTTCCTTACTCATCTTCCGTCGGCGGTTCTTCGAGGGCTCATCAGGCAATCCTTCTCGAAGATTGGATATCAACGCAGCATCGAGAGATTCAAACTCTCCTCTCCGACAACCAACGGCTTGCAGCCACTCACGTGGCGCTCAAGCAAGAGCTAGCAGCGGCCGAGAAAGAGCTTCGGCTCTTATCGGCCACTGCGTCTAAAGTCAAGGCCGAGAGAGACGCAGAGGTGAGGGAGGTTTATGAGAAATCGCTGAAGATGGGCGCTGAGGTTCGTGCCATGGACGCTATGATGGCAGAGCTCGTTCAAGTGCGGGCGGATATACATAAGCTGAGTACCGTAAAGCAAGAGTTAACGACGGAGTTGCAAGCAATTCGCGACGACCTTTCTAAAACCTCTTCAGAGTCACAGCCATTGCCGTCTATTAAAGCTGAAATTGATAGAATGCACCATGAAATTCAAAGAGGAAGGGCTGCTATTGAATACGAGAAACAGACACGCGCTAGTAATCTTGAGCAGAGTGAGGCCATGGAAAAGGGTATGGTTGCCATGTCTCAGGAAGTTGAGAAATTGCAGGCTGAACTGGCCAATGCTGAGAAGAGAGCAAGGGCTGCGGCAGCTGTAACGAGTCCTTTTCCTGGTTATGCTGCAACTTATGGCCATCCTGACATAAGATACAGTGGGAGCTCACATCCCCCTGACCCTTATGGCATGCGTCAGAATGATTACCAAATTGCTTCTATCCATAATATAGAAGGATGGTTTGTTCTAGGTTCAAGGAGGAGTTGGTGTAAATATTGCCTCGCAATACGCTCACGCACCACCGACGCATGGACCCCTTTACAGCGTGCAACCAGCACCACCACACATGCAATAAACGGGCAGAGCAATGCGGAAGGCACTGTAAATACTGCCGCAGAAGCTGTTCTTCCATCGGAGGAAGTTCTTTCGTCCAGGATCGCCGGAGAGTTTCGAACGTCGTTTTAA ATGGCCGGAAGAAGCCATCAGCCGAATGCGTTGAAACGACGCAAATTTCCATTGAACCGAAGCCCGAGTGATGATCGTCGAGCCCATCAACGTCTTCCTTACTCATCTTCCGTCGGCGGTTCTTCGAGGGCTCATCAGGCAATCCTTCTCGAAGATTGGATATCAACGCAGCATCGAGAGATTCAAACTCTCCTCTCCGACAACCAACGGCTTGCAGCCACTCACGTGGCGCTCAAGCAAGAGCTAGCAGCGGCCGAGAAAGAGCTTCGGCTCTTATCGGCCACTGCGTCTAAAGTCAAGGCCGAGAGAGACGCAGAGGTGAGGGAGGTTTATGAGAAATCGCTGAAGATGGGCGCTGAGGTTCGTGCCATGGACGCTATGATGGCAGAGCTCGTTCAAGTGCGGGCGGATATACATAAGCTGAGTACCGTAAAGCAAGAGTTAACGACGGAGTTGCAAGCAATTCGCGACGACCTTTCTAAAACCTCTTCAGAGTCACAGCCATTGCCGTCTATTAAAGCTGAAATTGATAGAATGCACCATGAAATTCAAAGAGGAAGGGCTGCTATTGAATACGAGAAACAGACACGCGCTAGTAATCTTGAGCAGAGTGAGGCCATGGAAAAGGGTATGGTTGCCATGTCTCAGGAAGTTGAGAAATTGCAGGCTGAACTGGCCAATGCTGAGAAGAGAGCAAGGGCTGCGGCAGCTGTAACGAGTCCTTTTCCTGGTTATGCTGCAACTTATGGCCATCCTGACATAAGATACAGTGGGAGCTCACATCCCCCTGACCCTTATGGCATGCGTCAGAATGATTACCAAATTGCTTCTATCCATAATATAGAAGGATGGTTTGTTCTAGGTTCAAGGAGGAGTTGGTGTAAATATTGCCTCGCAATACGCTCACGCACCACCGACGCATGGACCCCTTTACAGCGTGCAACCAGCACCACCACACATGCAATAAACGGGCAGAGCAATGCGGAAGGCACTGTAAATACTGCCGCAGAAGCTGTTCTTCCATCGGAGGAAGTTCTTTCGTCCAGGATCGCCGGAGAGTTTCGAACGTCGTTTTAA MAGRSHQPNALKRRKFPLNRSPSDDRRAHQRLPYSSSVGGSSRAHQAILLEDWISTQHREIQTLLSDNQRLAATHVALKQELAAAEKELRLLSATASKVKAERDAEVREVYEKSLKMGAEVRAMDAMMAELVQVRADIHKLSTVKQELTTELQAIRDDLSKTSSESQPLPSIKAEIDRMHHEIQRGRAAIEYEKQTRASNLEQSEAMEKGMVAMSQEVEKLQAELANAEKRARAAAAVTSPFPGYAATYGHPDIRYSGSSHPPDPYGMRQNDYQIASIHNIEGWFVLGSRRSWCKYCLAIRSRTTDAWTPLQRATSTTTHAINGQSNAEGTVNTAAEAVLPSEEVLSSRIAGEFRTSF Homology
BLAST of CmaCh01G007010 vs. ExPASy Swiss-Prot
Match: F4IMQ0 (Protein FLC EXPRESSOR OS=Arabidopsis thaliana OX=3702 GN=FLX PE=1 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.8e-41 Identity = 104/225 (46.22%), Postives = 149/225 (66.22%), Query Frame = 0
BLAST of CmaCh01G007010 vs. ExPASy Swiss-Prot
Match: Q93V84 (Protein FLX-like 1 OS=Arabidopsis thaliana OX=3702 GN=FLXL1 PE=1 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 4.3e-38 Identity = 93/220 (42.27%), Postives = 151/220 (68.64%), Query Frame = 0
BLAST of CmaCh01G007010 vs. ExPASy Swiss-Prot
Match: Q9C717 (Protein FLX-like 3 OS=Arabidopsis thaliana OX=3702 GN=FLXL3 PE=1 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 4.0e-28 Identity = 82/216 (37.96%), Postives = 128/216 (59.26%), Query Frame = 0
BLAST of CmaCh01G007010 vs. ExPASy Swiss-Prot
Match: Q84TD8 (Protein FLX-like 2 OS=Arabidopsis thaliana OX=3702 GN=FLXL2 PE=1 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 4.1e-25 Identity = 70/187 (37.43%), Postives = 119/187 (63.64%), Query Frame = 0
BLAST of CmaCh01G007010 vs. ExPASy Swiss-Prot
Match: Q9FH51 (Protein FLX-like 4 OS=Arabidopsis thaliana OX=3702 GN=FLXL4 PE=1 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.6e-16 Identity = 66/218 (30.28%), Postives = 119/218 (54.59%), Query Frame = 0
BLAST of CmaCh01G007010 vs. ExPASy TrEMBL
Match: A0A6J1KHD1 (protein FLC EXPRESSOR-like OS=Cucurbita maxima OX=3661 GN=LOC111493239 PE=3 SV=1) HSP 1 Score: 498.8 bits (1283), Expect = 1.9e-137 Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0
BLAST of CmaCh01G007010 vs. ExPASy TrEMBL
Match: A0A6J1G9G3 (protein FLC EXPRESSOR-like OS=Cucurbita moschata OX=3662 GN=LOC111452005 PE=3 SV=1) HSP 1 Score: 473.0 bits (1216), Expect = 1.1e-129 Identity = 258/270 (95.56%), Postives = 265/270 (98.15%), Query Frame = 0
BLAST of CmaCh01G007010 vs. ExPASy TrEMBL
Match: A0A6J1HLX7 (protein FLC EXPRESSOR-like OS=Cucurbita moschata OX=3662 GN=LOC111464813 PE=3 SV=1) HSP 1 Score: 428.7 bits (1101), Expect = 2.4e-116 Identity = 233/270 (86.30%), Postives = 251/270 (92.96%), Query Frame = 0
BLAST of CmaCh01G007010 vs. ExPASy TrEMBL
Match: A0A5A7UZC9 (Protein FLC EXPRESSOR OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00590 PE=3 SV=1) HSP 1 Score: 428.3 bits (1100), Expect = 3.1e-116 Identity = 234/270 (86.67%), Postives = 252/270 (93.33%), Query Frame = 0
BLAST of CmaCh01G007010 vs. ExPASy TrEMBL
Match: A0A1S3C6H8 (protein FLC EXPRESSOR OS=Cucumis melo OX=3656 GN=LOC103497037 PE=3 SV=1) HSP 1 Score: 428.3 bits (1100), Expect = 3.1e-116 Identity = 234/270 (86.67%), Postives = 252/270 (93.33%), Query Frame = 0
BLAST of CmaCh01G007010 vs. NCBI nr
Match: XP_022998658.1 (protein FLC EXPRESSOR-like [Cucurbita maxima]) HSP 1 Score: 498.8 bits (1283), Expect = 3.9e-137 Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0
BLAST of CmaCh01G007010 vs. NCBI nr
Match: KAG6607340.1 (putative protein phosphatase 2C 26, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 473.8 bits (1218), Expect = 1.3e-129 Identity = 259/270 (95.93%), Postives = 265/270 (98.15%), Query Frame = 0
BLAST of CmaCh01G007010 vs. NCBI nr
Match: KAG7037016.1 (Protein FLC EXPRESSOR, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 473.8 bits (1218), Expect = 1.3e-129 Identity = 259/270 (95.93%), Postives = 265/270 (98.15%), Query Frame = 0
BLAST of CmaCh01G007010 vs. NCBI nr
Match: XP_022948289.1 (protein FLC EXPRESSOR-like [Cucurbita moschata] >XP_022948290.1 protein FLC EXPRESSOR-like [Cucurbita moschata]) HSP 1 Score: 473.0 bits (1216), Expect = 2.3e-129 Identity = 258/270 (95.56%), Postives = 265/270 (98.15%), Query Frame = 0
BLAST of CmaCh01G007010 vs. NCBI nr
Match: XP_038894091.1 (protein FLC EXPRESSOR [Benincasa hispida] >XP_038896083.1 protein FLC EXPRESSOR-like [Benincasa hispida]) HSP 1 Score: 432.2 bits (1110), Expect = 4.4e-117 Identity = 237/270 (87.78%), Postives = 251/270 (92.96%), Query Frame = 0
BLAST of CmaCh01G007010 vs. TAIR 10
Match: AT2G30120.2 (unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 2527 Blast hits to 2101 proteins in 358 species: Archae - 77; Bacteria - 245; Metazoa - 1087; Fungi - 215; Plants - 350; Viruses - 4; Other Eukaryotes - 549 (source: NCBI BLink). ) HSP 1 Score: 171.4 bits (433), Expect = 1.3e-42 Identity = 104/225 (46.22%), Postives = 149/225 (66.22%), Query Frame = 0
BLAST of CmaCh01G007010 vs. TAIR 10
Match: AT3G14750.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67170.1); Has 4036 Blast hits to 3091 proteins in 519 species: Archae - 61; Bacteria - 669; Metazoa - 1503; Fungi - 255; Plants - 421; Viruses - 4; Other Eukaryotes - 1123 (source: NCBI BLink). ) HSP 1 Score: 160.2 bits (404), Expect = 3.0e-39 Identity = 93/220 (42.27%), Postives = 151/220 (68.64%), Query Frame = 0
BLAST of CmaCh01G007010 vs. TAIR 10
Match: AT1G55170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 13439 Blast hits to 8993 proteins in 828 species: Archae - 344; Bacteria - 1469; Metazoa - 6958; Fungi - 1008; Plants - 683; Viruses - 29; Other Eukaryotes - 2948 (source: NCBI BLink). ) HSP 1 Score: 127.1 bits (318), Expect = 2.8e-29 Identity = 82/216 (37.96%), Postives = 128/216 (59.26%), Query Frame = 0
BLAST of CmaCh01G007010 vs. TAIR 10
Match: AT2G30120.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 275 Blast hits to 241 proteins in 42 species: Archae - 4; Bacteria - 15; Metazoa - 15; Fungi - 4; Plants - 188; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). ) HSP 1 Score: 124.4 bits (311), Expect = 1.8e-28 Identity = 72/157 (45.86%), Postives = 104/157 (66.24%), Query Frame = 0
BLAST of CmaCh01G007010 vs. TAIR 10
Match: AT1G67170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 5478 Blast hits to 4354 proteins in 533 species: Archae - 87; Bacteria - 653; Metazoa - 2554; Fungi - 380; Plants - 418; Viruses - 16; Other Eukaryotes - 1370 (source: NCBI BLink). ) HSP 1 Score: 117.1 bits (292), Expect = 2.9e-26 Identity = 70/187 (37.43%), Postives = 119/187 (63.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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