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CmaCh01G006980 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTAATAAAATTAGATTCATTCTTCCATTGCTATTGAATCTCTGGAAGCCATGGATTCTCCGCCTAAACTCTGTTCCATGGCTTACATTTCATATTTGCTGCTACTGTTGCTTTGCTCGTTGTTGTTTCCTGTTTCATCTACTTCATACTCCATAGCCACAACCTCCAATTATGGCACCGAAAAAGTTTCGCTCCAACTCTACTACGAGTCTCTCTGTCCTTACAGCGCCAATTTCATTGTGAACTATCTGCCAAAGCTTTTCGATGACGATCTCATCTCCATTGTTGATCTCAGGCTCGTCCCTTATGGTAACGCCAGGGTTGGCCGCAACGATTCCATCACTTGTCAGGTCCTCCGTTTAATTCGTTCATTAGATTCGTTGTTTTCTTTCTTGACGATTTCTGTTTCGGTTAATTACTAAATAAATGGCGTATTTCGTTTGTTTCCATGCTTGATTTGACTTCAGTGTTCTGTTGATTTAGGTATTTGGTTATGGTTTGTTCAGGGATGAGAAATTGGTAGTTGTTCGGAATTTTAGATTTAAAATTGAATATGCAATTATGCGCACTTCTATCTGAATCTGATTTGCTTTTGTTTATTATATGTTGTTCAACAGAATAGCTTCTGCCTTGTTTACCATATTGTTCTTTGAAAGTCTCTCCGGGCTTATAATACGAATCTTGATATTGTTCTTTGAAAGTCTCTCCAATTTTATCATCAGTAAATCTGTTTATATTTCGAGATTGATATTCCTCCCTTACCTGATAGCTTAAGCTGTTTGATGTCCATGTTAGAGTTCTCTTTTCTGTTTCGTTTTACGTTGGTGTTCATGATTTTATACTCTTTCTACACAGTTTAATTTGCCTATGGATGGCTGGATGTGCTTGCATCCATATAAACTGTCTAATAAACTTGTACTGTGTGGTTGTAATTTCAGCATGGCCCGAATGAATGCCTATTGAACACTGTGGAAGCCTGTGCCATTAACGCCTGGCCAGAGCTGGTAAGACTTCTGATGGGAGCATGACACTAATCAGTTTCTTACAAAACCCTTTCCTTGTTTATTACATAGTTTCCAGCATGTAACTATGTGTCATTTTAATTGCATCAGTCGTGTCATTTTAATTGCATCAGTCTTTCCTATGTGTAGTTACTCATATAGCCCACTTATCGGCTGATCGTTATGATCATTAATGATGGGATTTTCCATTTGCTTCTATTTGTACAAAGTTCTCCTTACTAATATTATTTTTCATTGGGGGGAGGAGAACAATTTTTTATAAGGGGTAGAAACCTCTCTCTACGAGACACGTTTTAGGAAGCCCAAATGGAAAAGCTCAAAGAGGATAATATTTGTTGACGGTGGGCTTGGACTGGTACAAATAGTATCAGAGCTAGACACCGGGCGATGTGCTAGCTAAAAGACTAAGCCTCGAAGGGGGTGAATTGTGAAATCCCACATCGGTTTGGAAGGAGAATGAAACATTCTTTATAAGAGTGTAGAAACCTCTCCGTAGCAGACATGTTTTAAAAACCTTAAGGGGAAGCTCAAATGGGAAAAAACAATATCTGCTAGCAGTGAGCCTGGACGGTTATAAATAATTCCAATGTTGAAACTCATTTCTTACATTACAAATCTTTCAATGCATGTTACCTCAAACTCCGTATAGAGTTGTATCATTAGTTACCAAGGTACAAAGTGAGTGAGTTGGAATTATGGGGATGAAAGTTCTCATGTACTTATACTGCAGGATGGTCATTTTCCTTTCATTTACTGCGTCGAGTATCTGGTGTCCAAACGGAAGTACACCCAGTGGGAGTCATGTTTTGAGAAGTTGGGGTTGAATCCCAAGCCCATCAATGAATGCTACCTTACTGAGCTTGGGAAAATGGTGAGTTGTTTTAAATTACTCGGTTCAGATTTTTGTGTTAGTTCAAGTTTCATATATTGATAAGATATAACATTGTATAGAATACAAAGACTAATGGCACCTACTCAACTAATCCTGTACTGCTGCAACGGGTTCTTAGTTTCCAACATATCTAGCTGTTATGATTTTCGACTGACTGAAGATTTCACAGATTTCATTGACTGAGCATTAGGTTCATAATCAGTTCCCGGTCTCTAGGTTGTGATTGGGTAAACAAACATAGAGATTATCGACCATTCAATATGGAATCAAATGTTCTATGTGAGATCTCACATCGGTTGGGGAGGAAAATGAAACACTTTTTATGAGAGTGTGGAAACCTCTCCTTATCAGACGCATTTTAAAAACCTTGAGGAGAAGTCTGAAAGGGAAAACCCAAAGAGGACAATATCTGCTCACGGTAGGCATGGGCCATTACATTCTTGATTTGATTTTTATCATCTTCGGGCAGCTTGAACTGAAATATGCTGCTGAAACGGACAATCTTGAGCCTCCTCATAAGTACGTGCCTTGGGTTGTTGTAGATGGGAAACCACTTTATGAGGTTTGTTTCCTTCTTTCCGTTATGCTCACTCGTCTGCTCAAGTACAAATTAACTGCATAAAGGTCTAGGCTTGGGTCAACAAACATGGAAACGGTTTATTTATCTACTTATAAGGATTATTATAACTTTCCCTTGCTATAGGACTATGAAAACTTCATAAACTACATCTGTGAGGCGTATAAAGGACCTGTTCTGCCAAGTGCCTGTAAAGCTTCGTCCATTAGTGCCATTTGAGGATGAAAATCCTAGTTCAGCCTCCCAAATAGTGCAAGAAGACAGAGATGATGATAACGTTGATATAATAAACAAGAATGCAATCGAGGTGATAGTGTTATTTATTACACTGCTTGAATGATGTCACATTGTATGTACCCCCACACTCTGAAATTGTTCGGTTTAATTTATGGATAAAATGCACTTTTAGTAGTGAGATATGAATCGTTATCTATTTGGTCCATGAAATTTCAATAGAGACACTTTAGCCTATTGAGTTTGCGAAGTAATTTTAAATGGTCC ATTTAATAAAATTAGATTCATTCTTCCATTGCTATTGAATCTCTGGAAGCCATGGATTCTCCGCCTAAACTCTGTTCCATGGCTTACATTTCATATTTGCTGCTACTGTTGCTTTGCTCGTTGTTGTTTCCTGTTTCATCTACTTCATACTCCATAGCCACAACCTCCAATTATGGCACCGAAAAAGTTTCGCTCCAACTCTACTACGAGTCTCTCTGTCCTTACAGCGCCAATTTCATTGTGAACTATCTGCCAAAGCTTTTCGATGACGATCTCATCTCCATTGTTGATCTCAGGCTCGTCCCTTATGGTAACGCCAGGGTTGGCCGCAACGATTCCATCACTTGTCAGCATGGCCCGAATGAATGCCTATTGAACACTGTGGAAGCCTGTGCCATTAACGCCTGGCCAGAGCTGGATGGTCATTTTCCTTTCATTTACTGCGTCGAGTATCTGGTGTCCAAACGGAAGTACACCCAGTGGGAGTCATGTTTTGAGAAGTTGGGGTTGAATCCCAAGCCCATCAATGAATGCTACCTTACTGAGCTTGGGAAAATGCTTGAACTGAAATATGCTGCTGAAACGGACAATCTTGAGCCTCCTCATAAGTACGTGCCTTGGGTTGTTGTAGATGGGAAACCACTTTATGAGGTTTGTTTCCTTCTTTCCGTTATGCTCACTCGTCTGCTCAAGTACAAATTAACTGCATAAAGGTCTAGGCTTGGGTCAACAAACATGGAAACGGTTTATTTATCTACTTATAAGGATTATTATAACTTTCCCTTGCTATAGGACTATGAAAACTTCATAAACTACATCTGTGAGGCGTATAAAGGACCTGTTCTGCCAAGTGCCTGTAAAGCTTCGTCCATTAGTGCCATTTGAGGATGAAAATCCTAGTTCAGCCTCCCAAATAGTGCAAGAAGACAGAGATGATGATAACGTTGATATAATAAACAAGAATGCAATCGAGGTGATAGTGTTATTTATTACACTGCTTGAATGATGTCACATTGTATGTACCCCCACACTCTGAAATTGTTCGGTTTAATTTATGGATAAAATGCACTTTTAGTAGTGAGATATGAATCGTTATCTATTTGGTCCATGAAATTTCAATAGAGACACTTTAGCCTATTGAGTTTGCGAAGTAATTTTAAATGGTCC ATGGATTCTCCGCCTAAACTCTGTTCCATGGCTTACATTTCATATTTGCTGCTACTGTTGCTTTGCTCGTTGTTGTTTCCTGTTTCATCTACTTCATACTCCATAGCCACAACCTCCAATTATGGCACCGAAAAAGTTTCGCTCCAACTCTACTACGAGTCTCTCTGTCCTTACAGCGCCAATTTCATTGTGAACTATCTGCCAAAGCTTTTCGATGACGATCTCATCTCCATTGTTGATCTCAGGCTCGTCCCTTATGGTAACGCCAGGGTTGGCCGCAACGATTCCATCACTTGTCAGCATGGCCCGAATGAATGCCTATTGAACACTGTGGAAGCCTGTGCCATTAACGCCTGGCCAGAGCTGGATGGTCATTTTCCTTTCATTTACTGCGTCGAGTATCTGGTGTCCAAACGGAAGTACACCCAGTGGGAGTCATGTTTTGAGAAGTTGGGGTTGAATCCCAAGCCCATCAATGAATGCTACCTTACTGAGCTTGGGAAAATGCTTGAACTGAAATATGCTGCTGAAACGGACAATCTTGAGCCTCCTCATAAGTACGTGCCTTGGGTTGTTGTAGATGGGAAACCACTTTATGAGGTTTGTTTCCTTCTTTCCGTTATGCTCACTCGTCTGCTCAAGTACAAATTAACTGCATAA MDSPPKLCSMAYISYLLLLLLCSLLFPVSSTSYSIATTSNYGTEKVSLQLYYESLCPYSANFIVNYLPKLFDDDLISIVDLRLVPYGNARVGRNDSITCQHGPNECLLNTVEACAINAWPELDGHFPFIYCVEYLVSKRKYTQWESCFEKLGLNPKPINECYLTELGKMLELKYAAETDNLEPPHKYVPWVVVDGKPLYEVCFLLSVMLTRLLKYKLTA Homology
BLAST of CmaCh01G006980 vs. ExPASy Swiss-Prot
Match: Q9SV73 (Gamma-interferon-responsive lysosomal thiol protein OS=Arabidopsis thaliana OX=3702 GN=GILT PE=2 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 1.3e-40 Identity = 81/154 (52.60%), Postives = 102/154 (66.23%), Query Frame = 0
BLAST of CmaCh01G006980 vs. ExPASy Swiss-Prot
Match: B3SP85 (Gamma-interferon-inducible-lysosomal thiol reductase OS=Sus scrofa OX=9823 GN=IFI30 PE=2 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.3e-21 Identity = 69/170 (40.59%), Postives = 94/170 (55.29%), Query Frame = 0
BLAST of CmaCh01G006980 vs. ExPASy Swiss-Prot
Match: P13284 (Gamma-interferon-inducible lysosomal thiol reductase OS=Homo sapiens OX=9606 GN=IFI30 PE=1 SV=3) HSP 1 Score: 103.6 bits (257), Expect = 2.9e-21 Identity = 65/170 (38.24%), Postives = 90/170 (52.94%), Query Frame = 0
BLAST of CmaCh01G006980 vs. ExPASy Swiss-Prot
Match: O17861 (GILT-like protein F37H8.5 OS=Caenorhabditis elegans OX=6239 GN=F37H8.5 PE=1 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 2.9e-21 Identity = 54/161 (33.54%), Postives = 90/161 (55.90%), Query Frame = 0
BLAST of CmaCh01G006980 vs. ExPASy Swiss-Prot
Match: A6QPN6 (Gamma-interferon-inducible lysosomal thiol reductase OS=Bos taurus OX=9913 GN=IFI30 PE=2 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 3.5e-19 Identity = 64/172 (37.21%), Postives = 92/172 (53.49%), Query Frame = 0
BLAST of CmaCh01G006980 vs. ExPASy TrEMBL
Match: A0A6J1KAH6 (gamma-interferon-inducible lysosomal thiol reductase-like OS=Cucurbita maxima OX=3661 GN=LOC111493159 PE=3 SV=1) HSP 1 Score: 422.2 bits (1084), Expect = 1.4e-114 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of CmaCh01G006980 vs. ExPASy TrEMBL
Match: A0A6J1G8V6 (gamma-interferon-inducible lysosomal thiol reductase-like OS=Cucurbita moschata OX=3662 GN=LOC111452006 PE=3 SV=1) HSP 1 Score: 410.2 bits (1053), Expect = 5.3e-111 Identity = 194/200 (97.00%), Postives = 197/200 (98.50%), Query Frame = 0
BLAST of CmaCh01G006980 vs. ExPASy TrEMBL
Match: A0A5D3BE41 (Gamma-interferon-inducible lysosomal thiol reductase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00630 PE=3 SV=1) HSP 1 Score: 356.3 bits (913), Expect = 9.2e-95 Identity = 170/200 (85.00%), Postives = 179/200 (89.50%), Query Frame = 0
BLAST of CmaCh01G006980 vs. ExPASy TrEMBL
Match: A0A0A0LXR3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533560 PE=3 SV=1) HSP 1 Score: 342.8 bits (878), Expect = 1.0e-90 Identity = 166/200 (83.00%), Postives = 178/200 (89.00%), Query Frame = 0
BLAST of CmaCh01G006980 vs. ExPASy TrEMBL
Match: A0A1S3C735 (gamma-interferon-inducible lysosomal thiol reductase-like OS=Cucumis melo OX=3656 GN=LOC103497224 PE=3 SV=1) HSP 1 Score: 335.1 bits (858), Expect = 2.2e-88 Identity = 155/174 (89.08%), Postives = 162/174 (93.10%), Query Frame = 0
BLAST of CmaCh01G006980 vs. NCBI nr
Match: XP_022998561.1 (gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita maxima]) HSP 1 Score: 422.2 bits (1084), Expect = 2.8e-114 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of CmaCh01G006980 vs. NCBI nr
Match: KAG7037013.1 (Gamma-interferon-inducible lysosomal thiol reductase [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 413.7 bits (1062), Expect = 1.0e-111 Identity = 195/200 (97.50%), Postives = 198/200 (99.00%), Query Frame = 0
BLAST of CmaCh01G006980 vs. NCBI nr
Match: KAG6607336.1 (Gamma-interferon-responsive lysosomal thiol protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 412.1 bits (1058), Expect = 2.9e-111 Identity = 194/200 (97.00%), Postives = 197/200 (98.50%), Query Frame = 0
BLAST of CmaCh01G006980 vs. NCBI nr
Match: XP_023523171.1 (gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 411.0 bits (1055), Expect = 6.5e-111 Identity = 194/200 (97.00%), Postives = 196/200 (98.00%), Query Frame = 0
BLAST of CmaCh01G006980 vs. NCBI nr
Match: XP_022948291.1 (gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita moschata]) HSP 1 Score: 410.2 bits (1053), Expect = 1.1e-110 Identity = 194/200 (97.00%), Postives = 197/200 (98.50%), Query Frame = 0
BLAST of CmaCh01G006980 vs. TAIR 10
Match: AT1G07080.1 (Thioredoxin superfamily protein ) HSP 1 Score: 231.5 bits (589), Expect = 6.5e-61 Identity = 113/190 (59.47%), Postives = 146/190 (76.84%), Query Frame = 0
BLAST of CmaCh01G006980 vs. TAIR 10
Match: AT5G01580.1 (gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 181.0 bits (458), Expect = 1.0e-45 Identity = 87/184 (47.28%), Postives = 119/184 (64.67%), Query Frame = 0
BLAST of CmaCh01G006980 vs. TAIR 10
Match: AT4G12900.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 174.1 bits (440), Expect = 1.2e-43 Identity = 89/184 (48.37%), Postives = 116/184 (63.04%), Query Frame = 0
BLAST of CmaCh01G006980 vs. TAIR 10
Match: AT4G12890.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 173.3 bits (438), Expect = 2.1e-43 Identity = 89/183 (48.63%), Postives = 116/183 (63.39%), Query Frame = 0
BLAST of CmaCh01G006980 vs. TAIR 10
Match: AT4G12960.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 167.9 bits (424), Expect = 8.9e-42 Identity = 81/154 (52.60%), Postives = 102/154 (66.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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