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CmaCh01G006970 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCGAGAATGGCCCTCGTATGATTCAGCATGTCCAAGAATGCCAACAACAACCACCTGGCCTTCCTTCCGCCCACGATCCTCATACTACATTGAATTTTTTGCGGAATTCCGGCCATATGCATCGGAGACAAACCTTAAGCGACGGGAATTGAAGAGCTATTACTTGTAATTTGCAATTTGCAATTTGCTTGGCAAATCGACTCAACGTGTTATCGTATCCGTATATCCATGGATTCTTCGGCTAGAATCTCCTCCTTTGTTTTTCTCTTTCATCTCCTACTTTTGTTATGCTCTCTGGTTTCAGTTTCAACCTCCAGGGCAACGGCAAGCCCTGATTACGGGAGTGAGAAAGTATCGCTTGATGTTTACTATGAATCGCTCTGTCCAGACAGCGTTAAATTTATAGTGGACAATCTGATCGAGTTGTTTGAGGGTGGACTCATCTCCATAGTTGATCTTAGATTCGTTCCCTACGGCAATGCGAGGATCAATCGAAACAGTTCCATCACTTGTCAGGTCCTCCGTTAAATTCACCCTCTTTAGTTCCTTTTATAAACTAGATATGATTATAAACTTTTTTGTTTCGTTTGAATGAAGAGAATTCGATCAGAAGTTTTTTTCTGGATGTTCGATGGATGGAAATGAGAAGAAATAAGGATTTTGTTAATATAGCATTACTGTACCTAATTTGTGAAGGAAAACCAAATCCTGTAGAAATATTTTAGTCAGGATTTTAAATCCCTTCAAACCCTATAGAAACAAACAGAGGATTATTGATGATGATTCGGTTTTGATCGACTCGAAGATCGACAATTACAGCTAAATCTAATTCTGATTTTATGACTTTAGGTATTATTTTTCTGGCCTAGGGTGGAGGAATCAGGGCAATAGTAATTATGTTTAAAGAGTAATTGTTCGATTACTTAGAATCTTGCATTAAAAATGGTGAAGCCATGGTATAATTTTTGGCTTTGGGTGGATATGAAAGCCTAGACCTATAAATTTCTTGATCCAGATTTGATATCCCATTGCTGAAGCTGCCTTCATGGGTGTTCTTTTCATCCAACAAATCTATTCTCTTTGCTTTTAACTTATAGATCAACTCCATTGCCTTTAATTTTTCCTAACACAATATGAGAATCTCTTTGGGCTTATATTATGATGCCTTTGCGCATACCGGGCCAATGTAACGACCCAGACTCACCGCTAGCAAATATTGTCTTCTTTGGGCTTTCCCTTTCGAGCTTCCCCTCAAGGCTTTAAAATGTGTCTCCTAAGGGAAGGTTACCACACCCTTATAAAGGTGTTTTGTTCTTCTCCCCAACCAATGTGGGACATCACAATCCAACCCCCTTCGGGGCCCAGCGTCCTCGCTGACACTAGTTCCTTTCTCCAATCGATTTGAGACCCCCCCAAATTCACCCCCCTTTGGGACCCATCGTCTTTACTGGCACACTGCCTCGTGTCTACCCCCTTCGGGGAACAGCGAGAAGGCTGGCACATCGTTTGGTGTCTGGCTCTGATACCATTTGTAACGGCCCAAATTCACCGCTAGCAAATATTGTCCTTTTTGGGCTTTCCCTTTCGGGCTTCCCCTCAAAACTTTAAAACGCGTCTTCTAGGGGAAGGTTTCCACACCCTTATAAAGGTGTTTTGTTCTCCTCTCCAACCAATGTGAGATATCACAGCCAATTTCCTCATCAATGATCTTTTTAAGCTCTTTGAGAATGACCTTAGTTGAATTGTGAGTCTTGAAGAGGTGTGATTGTGACACATGTAAAAAAATCGAAAGATTCCTTCATGTTCTACATTCTATCTATCGTTTAGCTGTACATATCATGGTTTTCTGTTTCCATTTCAAGTTGATGTTTTGTTATGCCTTTCGACATGCTGAATCCTGCAAAACATAGTAATCACACAACATATACACACATGTATGGACATACTTGCGTACATATGCAGACTGATGAACTTGTATTTTGTGGTGGTGATTTCAGCATGGTCCTAATGAATGTCTACTGAACACTGTGGAAGCCTGCGCTATTCATGCCTGGCCTGAGCTGGTAAGTCTCATGATGACGGCCAAATGGTCAACTGGTCTGGTTATATAACTTATTTTGGTGTGTTATATTGCTGTCAACATTCGGTCTGTTTCTTCCTTGGGGGGCCTTTTGGGTTGAGGGTCATGCGCGGGGGCCTTCTGGGTTGAGGGTCATGTGCGGGGTTCCTATCAATACCATTTCAAAACATGAGATTCTGAAAATTATGGTATTATATAAATGAGTTGTAACAGCCCAAACTCATTGCTAGCAGATATTGTGCTATTTAGGCTTTTCCTTTCGGGTTTCCCCTCAAAGTTTTTAAAACGCATCTGCTGGGGAGAGGTTTTCACACCCTTATAAAGAATGTTTCATTCTTCTCCCTAACCAACGTGGGACCTCACATTAGCTCTTTTGATTTTCAAATTATTTAGTGGCATTTTGACTCATCGAGCAAATGAACCATATCGTTAACTTGATCAATCAGTTGGAATACTAAACTTTTATTCAAATTTATGGATGTAGACAGGGCATTTTCCTTTTATTTTCTGTGTGGAGGCTGCAGTGTATGAGCGGAAGTATACCCAATGGGAGACTTGCTTCGAGAAATTGGGATTGAATCCTAAGCCTGTTTATGATTGCTATTCTTCAGGACTTGGGAAAGAGGTGAGTTACTACAACCAACTCATGCATATTTGAGCATTAAATTGCAACCGGATTAACTAACCAAATCTATGAGGATTGATTGTGTTTATATGACCTGAATCATCATTTTTTATGCAGCTTGAATTACAATATGCAGCTCAAACCAACAATCTTCAGCCTCCTCATAAATACGTTCCTTGGGTGGTTGTTGATGGACAACCGCTTTATGAGGTTTGTTTTTCTCAATAACCTTATTGTCTAGGTCGATCCAAAAAGGACGACATGAGTGGCAAAATAATAGAAGGATCCTGGAAACTAGTTTCCAGTTTTATAGTCACATTCTCATTCTCAAACTTGCCTAATGTCAATCACTCACGAACATGTCCAGTAGGCTTTGACTAAGCATAGGAATGAACTTTAAACAAGATTTGCCATAAACTCAATTTGGATAAGCAAGCAAATCCTAAAACTTGTCTTGAATTTTTCTTAAATGTGTATAAAACACGTTTGTTCATGAACACACCCATGGAATTTTGCCTCTTATATAAAACACGTTTGTTCATTCTAATTATATTTTTTCAATCTCAACGAGTGAATAATAATAGGTTATTATGATTTCGAGAAAGCCGCTATAATGAAATCGGTAGACACGCTGCTCTTAGGAAGCAGTGCTGGAGCATCTCGGTTCGAGTCCGAGTAGCGGCATGCCATTTTATATTATAACACAAGTTCTATAATATAATTAATTCACGTCCCCGATATTAATTCAAATAATTGAATTGAGGGACCTTTTAAAATTTTTTTTATGATATTTTCAACTTTAGAGTATATATTAACTCATTTATCTTTTTCGATCATTTCAACTGTCATTACAATTCATTTGATAACCTTATTAGTCGATGAAACCGTAGGATTCTATGCTTCGTCAGAAAAGGACATGATAGCTACTTTTTCTGTATAACAGGATTATTAGTTACTGGATTTATTTGAGGCATTTACCATGAAGTGATTTATATGAATCATTACTATTTCTTTCCTGGAGTTTCTCCATTATTAATCTATTTACATGAAGCATTTCTTCTTAAGAAAGTTATTGAAGAATGAAATGGGGTTTTCACAAAGTGATTGGCCATTAATTTATATACAATGCACAGCTTAAGCGTTTTGATTCTAACCCAACCATGCATCTAAAGCTTCTGAGGATTGCCATAATTTCCTGTTTCTGCAGGACTTCGAAAACTTCGTAAGCTATATCTGTGCGGCGTATAAAGGTTCTTCTGTGCCAAGCGCATGTAGTAAATCTAAATCCCTTAGTTCCATTTAAAGAGGTAGAAAAGGAAAGTTCTATATGAAGTGGTGAAGATGGTAATGCTGCTGTTTCATCTGCAATAATGTTGTTGAAATTGTTTACCGAATAATAATAGCGTTATTGTTTGTAGGAAGCGTTCGTGGCGTTGTCATCAACATTTAAAATCTGAGAATATGGATACGACATAGAAGAAGTCGGTCATCTTGATGACGTCTGAGGCTACAAAGGAAGCATTTAGATTGTCTTTATATGTACTTTTAAGGTTAGAGACATTCACATATTTTAAACTCAAGCATATATACAAAGGCCCTCTACACTTTTTGTGTATATGTCTAAAATTAGTAACAATTTAATTCATACCATAAATAATCTAAGCTAATGTGTAATGTGGGTTTGTCGTGGATGTCAGTTAAATCCCACCAATTTCTTACACAGATATTTCTTATCAATGTAAGTCACATTACTAACTAAAA CCGAGAATGGCCCTCGTATGATTCAGCATGTCCAAGAATGCCAACAACAACCACCTGGCCTTCCTTCCGCCCACGATCCTCATACTACATTGAATTTTTTGCGGAATTCCGGCCATATGCATCGGAGACAAACCTTAAGCGACGGGAATTGAAGAGCTATTACTTGTAATTTGCAATTTGCAATTTGCTTGGCAAATCGACTCAACGTGTTATCGTATCCGTATATCCATGGATTCTTCGGCTAGAATCTCCTCCTTTGTTTTTCTCTTTCATCTCCTACTTTTGTTATGCTCTCTGGTTTCAGTTTCAACCTCCAGGGCAACGGCAAGCCCTGATTACGGGAGTGAGAAAGTATCGCTTGATGTTTACTATGAATCGCTCTGTCCAGACAGCGTTAAATTTATAGTGGACAATCTGATCGAGTTGTTTGAGGGTGGACTCATCTCCATAGTTGATCTTAGATTCGTTCCCTACGGCAATGCGAGGATCAATCGAAACAGTTCCATCACTTGTCAGCATGGTCCTAATGAATGTCTACTGAACACTGTGGAAGCCTGCGCTATTCATGCCTGGCCTGAGCTGACAGGGCATTTTCCTTTTATTTTCTGTGTGGAGGCTGCAGTGTATGAGCGGAAGTATACCCAATGGGAGACTTGCTTCGAGAAATTGGGATTGAATCCTAAGCCTGTTTATGATTGCTATTCTTCAGGACTTGGGAAAGAGCTTGAATTACAATATGCAGCTCAAACCAACAATCTTCAGCCTCCTCATAAATACGTTCCTTGGGTGGTTGTTGATGGACAACCGCTTTATGAGGACTTCGAAAACTTCGTAAGCTATATCTGTGCGGCGTATAAAGGTTCTTCTGTGCCAAGCGCATGTAGTAAATCTAAATCCCTTAGTTCCATTTAAAGAGGTAGAAAAGGAAAGTTCTATATGAAGTGGTGAAGATGGAAGCGTTCGTGGCGTTGTCATCAACATTTAAAATCTGAGAATATGGATACGACATAGAAGAAGTCGGTCATCTTGATGACGTCTGAGGCTACAAAGGAAGCATTTAGATTGTCTTTATATGTACTTTTAAGGTTAGAGACATTCACATATTTTAAACTCAAGCATATATACAAAGGCCCTCTACACTTTTTGTGTATATGTCTAAAATTAGTAACAATTTAATTCATACCATAAATAATCTAAGCTAATGTGTAATGTGGGTTTGTCGTGGATGTCAGTTAAATCCCACCAATTTCTTACACAGATATTTCTTATCAATGTAAGTCACATTACTAACTAAAA ATGGATTCTTCGGCTAGAATCTCCTCCTTTGTTTTTCTCTTTCATCTCCTACTTTTGTTATGCTCTCTGGTTTCAGTTTCAACCTCCAGGGCAACGGCAAGCCCTGATTACGGGAGTGAGAAAGTATCGCTTGATGTTTACTATGAATCGCTCTGTCCAGACAGCGTTAAATTTATAGTGGACAATCTGATCGAGTTGTTTGAGGGTGGACTCATCTCCATAGTTGATCTTAGATTCGTTCCCTACGGCAATGCGAGGATCAATCGAAACAGTTCCATCACTTGTCAGCATGGTCCTAATGAATGTCTACTGAACACTGTGGAAGCCTGCGCTATTCATGCCTGGCCTGAGCTGACAGGGCATTTTCCTTTTATTTTCTGTGTGGAGGCTGCAGTGTATGAGCGGAAGTATACCCAATGGGAGACTTGCTTCGAGAAATTGGGATTGAATCCTAAGCCTGTTTATGATTGCTATTCTTCAGGACTTGGGAAAGAGCTTGAATTACAATATGCAGCTCAAACCAACAATCTTCAGCCTCCTCATAAATACGTTCCTTGGGTGGTTGTTGATGGACAACCGCTTTATGAGGACTTCGAAAACTTCGTAAGCTATATCTGTGCGGCGTATAAAGGTTCTTCTGTGCCAAGCGCATGTAGTAAATCTAAATCCCTTAGTTCCATTTAA MDSSARISSFVFLFHLLLLLCSLVSVSTSRATASPDYGSEKVSLDVYYESLCPDSVKFIVDNLIELFEGGLISIVDLRFVPYGNARINRNSSITCQHGPNECLLNTVEACAIHAWPELTGHFPFIFCVEAAVYERKYTQWETCFEKLGLNPKPVYDCYSSGLGKELELQYAAQTNNLQPPHKYVPWVVVDGQPLYEDFENFVSYICAAYKGSSVPSACSKSKSLSSI Homology
BLAST of CmaCh01G006970 vs. ExPASy Swiss-Prot
Match: Q9SV73 (Gamma-interferon-responsive lysosomal thiol protein OS=Arabidopsis thaliana OX=3702 GN=GILT PE=2 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 1.6e-43 Identity = 91/217 (41.94%), Postives = 133/217 (61.29%), Query Frame = 0
BLAST of CmaCh01G006970 vs. ExPASy Swiss-Prot
Match: Q499T2 (Gamma-interferon-inducible lysosomal thiol reductase OS=Rattus norvegicus OX=10116 GN=Ifi30 PE=2 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 9.3e-23 Identity = 71/191 (37.17%), Postives = 102/191 (53.40%), Query Frame = 0
BLAST of CmaCh01G006970 vs. ExPASy Swiss-Prot
Match: P13284 (Gamma-interferon-inducible lysosomal thiol reductase OS=Homo sapiens OX=9606 GN=IFI30 PE=1 SV=3) HSP 1 Score: 105.9 bits (263), Expect = 6.0e-22 Identity = 66/193 (34.20%), Postives = 98/193 (50.78%), Query Frame = 0
BLAST of CmaCh01G006970 vs. ExPASy Swiss-Prot
Match: E7E2N8 (Gamma-interferon-inducible lysosomal thiol reductase OS=Carassius auratus OX=7957 GN=ifi30 PE=1 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.0e-21 Identity = 67/197 (34.01%), Postives = 104/197 (52.79%), Query Frame = 0
BLAST of CmaCh01G006970 vs. ExPASy Swiss-Prot
Match: A6QPN6 (Gamma-interferon-inducible lysosomal thiol reductase OS=Bos taurus OX=9913 GN=IFI30 PE=2 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.3e-21 Identity = 72/213 (33.80%), Postives = 107/213 (50.23%), Query Frame = 0
BLAST of CmaCh01G006970 vs. ExPASy TrEMBL
Match: A0A6J1KC63 (gamma-interferon-inducible lysosomal thiol reductase-like OS=Cucurbita maxima OX=3661 GN=LOC111492992 PE=3 SV=1) HSP 1 Score: 469.2 bits (1206), Expect = 1.0e-128 Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0
BLAST of CmaCh01G006970 vs. ExPASy TrEMBL
Match: A0A6J1GC05 (gamma-interferon-inducible lysosomal thiol reductase-like OS=Cucurbita moschata OX=3662 GN=LOC111452764 PE=3 SV=1) HSP 1 Score: 459.9 bits (1182), Expect = 6.1e-126 Identity = 222/227 (97.80%), Postives = 226/227 (99.56%), Query Frame = 0
BLAST of CmaCh01G006970 vs. ExPASy TrEMBL
Match: A0A6J1DLJ0 (gamma-interferon-inducible lysosomal thiol reductase-like OS=Momordica charantia OX=3673 GN=LOC111022039 PE=3 SV=1) HSP 1 Score: 392.9 bits (1008), Expect = 9.1e-106 Identity = 190/229 (82.97%), Postives = 209/229 (91.27%), Query Frame = 0
BLAST of CmaCh01G006970 vs. ExPASy TrEMBL
Match: A0A0A0LVM7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533550 PE=3 SV=1) HSP 1 Score: 389.8 bits (1000), Expect = 7.7e-105 Identity = 192/231 (83.12%), Postives = 206/231 (89.18%), Query Frame = 0
BLAST of CmaCh01G006970 vs. ExPASy TrEMBL
Match: A0A1S3C5X1 (gamma-interferon-inducible lysosomal thiol reductase-like OS=Cucumis melo OX=3656 GN=LOC103497041 PE=3 SV=1) HSP 1 Score: 384.4 bits (986), Expect = 3.3e-103 Identity = 189/231 (81.82%), Postives = 204/231 (88.31%), Query Frame = 0
BLAST of CmaCh01G006970 vs. NCBI nr
Match: XP_022998319.1 (gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita maxima] >XP_022998320.1 gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita maxima] >XP_022998321.1 gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita maxima] >XP_022998322.1 gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita maxima]) HSP 1 Score: 469.2 bits (1206), Expect = 2.1e-128 Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0
BLAST of CmaCh01G006970 vs. NCBI nr
Match: XP_022949402.1 (gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita moschata] >XP_022949403.1 gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita moschata] >XP_022949404.1 gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita moschata] >KAG6607335.1 Gamma-interferon-responsive lysosomal thiol protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 459.9 bits (1182), Expect = 1.3e-125 Identity = 222/227 (97.80%), Postives = 226/227 (99.56%), Query Frame = 0
BLAST of CmaCh01G006970 vs. NCBI nr
Match: XP_023523172.1 (gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita pepo subsp. pepo] >XP_023523173.1 gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 459.5 bits (1181), Expect = 1.6e-125 Identity = 222/227 (97.80%), Postives = 225/227 (99.12%), Query Frame = 0
BLAST of CmaCh01G006970 vs. NCBI nr
Match: KAG7037011.1 (Gamma-interferon-inducible lysosomal thiol reductase, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 450.3 bits (1157), Expect = 1.0e-122 Identity = 221/240 (92.08%), Postives = 226/240 (94.17%), Query Frame = 0
BLAST of CmaCh01G006970 vs. NCBI nr
Match: XP_038894278.1 (gamma-interferon-responsive lysosomal thiol protein-like [Benincasa hispida]) HSP 1 Score: 398.7 bits (1023), Expect = 3.4e-107 Identity = 191/227 (84.14%), Postives = 206/227 (90.75%), Query Frame = 0
BLAST of CmaCh01G006970 vs. TAIR 10
Match: AT1G07080.1 (Thioredoxin superfamily protein ) HSP 1 Score: 261.9 bits (668), Expect = 4.7e-70 Identity = 127/212 (59.91%), Postives = 153/212 (72.17%), Query Frame = 0
BLAST of CmaCh01G006970 vs. TAIR 10
Match: AT5G01580.1 (gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 203.4 bits (516), Expect = 2.0e-52 Identity = 89/180 (49.44%), Postives = 126/180 (70.00%), Query Frame = 0
BLAST of CmaCh01G006970 vs. TAIR 10
Match: AT4G12890.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 192.2 bits (487), Expect = 4.6e-49 Identity = 94/219 (42.92%), Postives = 137/219 (62.56%), Query Frame = 0
BLAST of CmaCh01G006970 vs. TAIR 10
Match: AT4G12900.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 183.7 bits (465), Expect = 1.6e-46 Identity = 94/218 (43.12%), Postives = 132/218 (60.55%), Query Frame = 0
BLAST of CmaCh01G006970 vs. TAIR 10
Match: AT4G12960.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 177.6 bits (449), Expect = 1.2e-44 Identity = 91/217 (41.94%), Postives = 133/217 (61.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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