CmaCh01G006840 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh01G006840
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein CHUP1, chloroplastic
Location	Cma_Chr01: 3574303 .. 3576753 (+)
RNA-Seq Expression	CmaCh01G006840
Synteny	CmaCh01G006840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCCAAAAAGGGAAGCAAATTATTGTTGGTTGGTTGGATTCTCCTTCAGCCCATCTCTAAGAAAGACCACAAAATCAGAGGAGAATGCCAATGGAAGAAGATGAAGAATTGGCCATGGAGATCGACGCCTTGAAAAGGGAATTGGAAATTTCACTGCAGAAATCGAATTTTCTCGAGAAAGAAAATCAAGAACTCAAACAAGAATTGGCTCGATTCAAATCCCACCTTCAGTCTCTGAAGCCTCATAATAATGACAGAAAATCCATTCTTTGGAAGAAATTTCACAATTCCATGGATGTCGCCGTCGCCGGAACTGACTCGTCACCACAGAGTCCGCCGGCGACTGACAAATGGGAGACTACCAGAACGCAGAAACAGAGTAATTGGGCTGTTGTGAAAGAGAATCAGAGAATGGCGGCGGCGGCACCGACCCCGGCTCCTCCACCGCCGCCGCCACTTCCGACGAAGCTGCTCGGGGGATCTAAGGCAGTGCGGCGAGTCCCGGAAGTGTTGGAGCTGTACCGTTTAGTGACGAAAAGGGATGCCCAGAAGGAAAATAAGGCCACAAACGGAGGATTTCCGGCGGTGGCGTTCACCAAAAACATGATCGGCGAAATCGAAAACCGATCAGCCTATCTCTCAGCGGTACGTATATAGGCTTTTTATTTTAATTAATTTAAAGTAGAATTAAGAATTAATCAAATTAAAAATTATAATAAAATCATGTACTATTTTTTCGGCTTTGAAAATTTTAATTGTGTACTAAATAAGTCATTGAAATAATCACATCACATAGATACAACTATTTTTGTAGTTAATTAAGTATAAATACCCATACCCAATTTTAATTTGTAGCAAGTTTATATCGTTAAATTAGAGATATATAATTGTAAGAACATGGAAAGTTTTGGATGAGAAAGACGAAAAAGGCAAGTGAATGAAAGCATGGGCGCAGATAAAATCGGAGGTGGAGACACATGGGGAGTTCGTGAACCGGCTGATCAGAGAAGTGGAAGCGGCAGCGCCAAGAGACATAGCAGAGGTGGAGAGGTTCGTGAAGTGGCTAGACGGGGAGCTGGCATCGCTCGTGGACGAGAGGGCGGTGCTCAAGCACTTTCCACGGTGGCCGGAGGGGAAGGCAGACGCACTGCGGGAGGCGGCATTCAGCTACAAGGATCTGAAGAGCTTGGAAGCTGAAGTGTGTTCGTTTAGAGAGAATCCAAAGGAGGAGACGAATGCTATGTTGAAGAGGGCTCAGGCCTTGCAAGACAGGCGAGCATGTACAATCTGTTGTATTTCATGTTTCCAATAAGGTGAAGCAGAGTTGGAAAGTGACTGATGAACTAGAGAAATGCTTGGAACTGTGCAGGTTGGAGCAGAGCGTGAGCAATGTGGAGAGGACGAGGGAGTTCAACTGTAACAAGTACAACAAGTTTCAAATCCCTTGCCAATGGATGCTGGACTCTGGCTTGCCAGCCCAGGTAGTTAACTCTTAATCAAACTTTGGCTCTAAAACCAAAAACCATGAACACCCACTTCCATCCATTTAAAAAGAATCTCCTTCTTTCTTCCATCCATTATAAAAATTCCTGGTTTCTAACATAGTATCAGTCGTGCCCCTCAAATGTCGAACACAAAGAAGTTGTGAGCCTCGAAAGTGTAGTCAAAAGTGACCAAGTGTCGAACAAAATGTATACTTTATTCGAAGGCTCAAGAGGAGTCGAACCTTGATTAAGGGGAGGTTGTTCAAAGGCTCCATAGACCTCAAGATAGGTTCTATGGTATACATTGTTCGAGGGAAGAATTGTTGAGAATTTTTGGGAGATAAGTCCCACATCCGTTAATTAAGGGGTTGATAATGGGTTTAATTTATACGAACTACTATCTCCATTAGTATGAGACATTTTGGATAAAAACCAAAAAGCAAAATCATAAACTTATGCTCAAAGTGGACAATGGACAATATCATACCATTGCACCTTCTAAACTAGAGAAGGTAAAAATTAAAAACTGTAAAACACAATTGGTTGCAGATGAAGCTGAGCTCATTGAGGCTAGTGAAGGAATGCATGCGTAGGATAACAAAAGAGCTACAATTGAACGAAACACCACAAACAGAAAACCTTTTTCTTCAAGGGGTTCGCTTTGCTTACAGGGTGCACCAGGTAAGCTACAAAGTCATACTCTGATCACATTTAATGATACTCAACAATAACACTCGGTATCTTTTCAGTATGCAGGTGGTTTTGATTCGGAAGCTATAGTGGCTTTTGAAGGAATGAAGCAAGTTGGGCTGCTGCTTAGTCAAAGAAAATAGGGTTCTTTTGGCGAAAAGTTATAGGTAAGAATCAACATTGCAGCAGACCACATTCAAAAAAGGATGTAATATGAATGATTGAATGGGAAGTTTCTATACATAATCAATCCTATATGCTTATTGCAACTTA

mRNA sequence

ATGAAGCCAAAAAGGGAAGCAAATTATTGTTGGTTGGTTGGATTCTCCTTCAGCCCATCTCTAAGAAAGACCACAAAATCAGAGGAGAATGCCAATGGAAGAAGATGAAGAATTGGCCATGGAGATCGACGCCTTGAAAAGGGAATTGGAAATTTCACTGCAGAAATCGAATTTTCTCGAGAAAGAAAATCAAGAACTCAAACAAGAATTGGCTCGATTCAAATCCCACCTTCAGTCTCTGAAGCCTCATAATAATGACAGAAAATCCATTCTTTGGAAGAAATTTCACAATTCCATGGATGTCGCCGTCGCCGGAACTGACTCGTCACCACAGAGTCCGCCGGCGACTGACAAATGGGAGACTACCAGAACGCAGAAACAGAGTAATTGGGCTGTTGTGAAAGAGAATCAGAGAATGGCGGCGGCGGCACCGACCCCGGCTCCTCCACCGCCGCCGCCACTTCCGACGAAGCTGCTCGGGGGATCTAAGGCAGTGCGGCGAGTCCCGGAAGTGTTGGAGCTGTACCGTTTAGTGACGAAAAGGGATGCCCAGAAGGAAAATAAGGCCACAAACGGAGGATTTCCGGCGGTGGCGTTCACCAAAAACATGATCGGCGAAATCGAAAACCGATCAGCCTATCTCTCAGCGATAAAATCGGAGGTGGAGACACATGGGGAGTTCGTGAACCGGCTGATCAGAGAAGTGGAAGCGGCAGCGCCAAGAGACATAGCAGAGGTGGAGAGGTTCGTGAAGTGGCTAGACGGGGAGCTGGCATCGCTCGTGGACGAGAGGGCGGTGCTCAAGCACTTTCCACGGTGGCCGGAGGGGAAGGCAGACGCACTGCGGGAGGCGGCATTCAGCTACAAGGATCTGAAGAGCTTGGAAGCTGAAGTGTGTTCGTTTAGAGAGAATCCAAAGGAGGAGACGAATGCTATGTTGAAGAGGGCTCAGGCCTTGCAAGACAGGTTGGAGCAGAGCGTGAGCAATGTGGAGAGGACGAGGGAGTTCAACTGTAACAAGTACAACAAGTTTCAAATCCCTTGCCAATGGATGCTGGACTCTGGCTTGCCAGCCCAGATGAAGCTGAGCTCATTGAGGCTAGTGAAGGAATGCATGCGTAGGATAACAAAAGAGCTACAATTGAACGAAACACCACAAACAGAAAACCTTTTTCTTCAAGGGGTTCGCTTTGCTTACAGGGTGCACCAGTATGCAGGTGGTTTTGATTCGGAAGCTATAGTGGCTTTTGAAGGAATGAAGCAAGTTGGGCTGCTGCTTAGTCAAAGAAAATAGGGTTCTTTTGGCGAAAAGTTATAGGTAAGAATCAACATTGCAGCAGACCACATTCAAAAAAGGATGTAATATGAATGATTGAATGGGAAGTTTCTATACATAATCAATCCTATATGCTTATTGCAACTTA

Coding sequence (CDS)

ATGCCAATGGAAGAAGATGAAGAATTGGCCATGGAGATCGACGCCTTGAAAAGGGAATTGGAAATTTCACTGCAGAAATCGAATTTTCTCGAGAAAGAAAATCAAGAACTCAAACAAGAATTGGCTCGATTCAAATCCCACCTTCAGTCTCTGAAGCCTCATAATAATGACAGAAAATCCATTCTTTGGAAGAAATTTCACAATTCCATGGATGTCGCCGTCGCCGGAACTGACTCGTCACCACAGAGTCCGCCGGCGACTGACAAATGGGAGACTACCAGAACGCAGAAACAGAGTAATTGGGCTGTTGTGAAAGAGAATCAGAGAATGGCGGCGGCGGCACCGACCCCGGCTCCTCCACCGCCGCCGCCACTTCCGACGAAGCTGCTCGGGGGATCTAAGGCAGTGCGGCGAGTCCCGGAAGTGTTGGAGCTGTACCGTTTAGTGACGAAAAGGGATGCCCAGAAGGAAAATAAGGCCACAAACGGAGGATTTCCGGCGGTGGCGTTCACCAAAAACATGATCGGCGAAATCGAAAACCGATCAGCCTATCTCTCAGCGATAAAATCGGAGGTGGAGACACATGGGGAGTTCGTGAACCGGCTGATCAGAGAAGTGGAAGCGGCAGCGCCAAGAGACATAGCAGAGGTGGAGAGGTTCGTGAAGTGGCTAGACGGGGAGCTGGCATCGCTCGTGGACGAGAGGGCGGTGCTCAAGCACTTTCCACGGTGGCCGGAGGGGAAGGCAGACGCACTGCGGGAGGCGGCATTCAGCTACAAGGATCTGAAGAGCTTGGAAGCTGAAGTGTGTTCGTTTAGAGAGAATCCAAAGGAGGAGACGAATGCTATGTTGAAGAGGGCTCAGGCCTTGCAAGACAGGTTGGAGCAGAGCGTGAGCAATGTGGAGAGGACGAGGGAGTTCAACTGTAACAAGTACAACAAGTTTCAAATCCCTTGCCAATGGATGCTGGACTCTGGCTTGCCAGCCCAGATGAAGCTGAGCTCATTGAGGCTAGTGAAGGAATGCATGCGTAGGATAACAAAAGAGCTACAATTGAACGAAACACCACAAACAGAAAACCTTTTTCTTCAAGGGGTTCGCTTTGCTTACAGGGTGCACCAGTATGCAGGTGGTTTTGATTCGGAAGCTATAGTGGCTTTTGAAGGAATGAAGCAAGTTGGGCTGCTGCTTAGTCAAAGAAAATAG

Protein sequence

MPMEEDEELAMEIDALKRELEISLQKSNFLEKENQELKQELARFKSHLQSLKPHNNDRKSILWKKFHNSMDVAVAGTDSSPQSPPATDKWETTRTQKQSNWAVVKENQRMAAAAPTPAPPPPPPLPTKLLGGSKAVRRVPEVLELYRLVTKRDAQKENKATNGGFPAVAFTKNMIGEIENRSAYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGELASLVDERAVLKHFPRWPEGKADALREAAFSYKDLKSLEAEVCSFRENPKEETNAMLKRAQALQDRLEQSVSNVERTREFNCNKYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRITKELQLNETPQTENLFLQGVRFAYRVHQYAGGFDSEAIVAFEGMKQVGLLLSQRK

Homology

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BLAST of CmaCh01G006840 vs. ExPASy Swiss-Prot
Match: Q9LI74 (Protein CHUP1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CHUP1 PE=1 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.3e-64
Identity = 139/287 (48.43%), Postives = 192/287 (66.90%), Query Frame = 0


Query: 115 PTPAPPPPPPLPTKL---LGGSKAVRRVPEVLELYRLVTKRDAQKE---NKATNGGFPAV 174
           P   PPPPPP P  L    GG   V R PE++E Y+ + KR+++KE   +  ++G   + 
Sbjct: 694 PGGGPPPPPPPPGALGRGAGGGNKVHRAPELVEFYQSLMKRESKKEGAPSLISSGTGNSS 753

Query: 175 AFTKNMIGEIENRSAYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGEL 234
           A   NMIGEIENRS +L A+K++VET G+FV  L  EV A++  DI ++  FV WLD EL
Sbjct: 754 AARNNMIGEIENRSTFLLAVKADVETQGDFVQSLATEVRASSFTDIEDLLAFVSWLDEEL 813

Query: 235 ASLVDERAVLKHFPRWPEGKADALREAAFSYKDLKSLEAEVCSFRENPKEETNAMLKRAQ 294
           + LVDERAVLKHF  WPEGKADALREAAF Y+DL  LE +V SF ++P       LK+  
Sbjct: 814 SFLVDERAVLKHFD-WPEGKADALREAAFEYQDLMKLEKQVTSFVDDPNLSCEPALKKMY 873

Query: 295 ALQDRLEQSVSNVERTREFNCNKYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRITK 354
            L +++EQSV  + RTR+   ++Y +F IP  W+ D+G+  ++KLSS++L K+ M+R+  
Sbjct: 874 KLLEKVEQSVYALLRTRDMAISRYKEFGIPVDWLSDTGVVGKIKLSSVQLAKKYMKRVAY 933

Query: 355 ELQ----LNETPQTENLFLQGVRFAYRVHQYAGGFDSEAIVAFEGMK 392
           EL      ++ P  E L LQGVRFA+RVHQ+AGGFD+E++ AFE ++
Sbjct: 934 ELDSVSGSDKDPNREFLLLQGVRFAFRVHQFAGGFDAESMKAFEELR 979

[Close]

BLAST of CmaCh01G006840 vs. ExPASy TrEMBL
Match: A0A6J1K8G4 (protein CHUP1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493194 PE=4 SV=1)

HSP 1 Score: 780.0 bits (2013), Expect = 4.7e-222
Identity = 401/401 (100.00%), Postives = 401/401 (100.00%), Query Frame = 0


Query: 1   MPMEEDEELAMEIDALKRELEISLQKSNFLEKENQELKQELARFKSHLQSLKPHNNDRKS 60
           MPMEEDEELAMEIDALKRELEISLQKSNFLEKENQELKQELARFKSHLQSLKPHNNDRKS
Sbjct: 1   MPMEEDEELAMEIDALKRELEISLQKSNFLEKENQELKQELARFKSHLQSLKPHNNDRKS 60

Query: 61  ILWKKFHNSMDVAVAGTDSSPQSPPATDKWETTRTQKQSNWAVVKENQRMAAAAPTPAPP 120
           ILWKKFHNSMDVAVAGTDSSPQSPPATDKWETTRTQKQSNWAVVKENQRMAAAAPTPAPP
Sbjct: 61  ILWKKFHNSMDVAVAGTDSSPQSPPATDKWETTRTQKQSNWAVVKENQRMAAAAPTPAPP 120

Query: 121 PPPPLPTKLLGGSKAVRRVPEVLELYRLVTKRDAQKENKATNGGFPAVAFTKNMIGEIEN 180
           PPPPLPTKLLGGSKAVRRVPEVLELYRLVTKRDAQKENKATNGGFPAVAFTKNMIGEIEN
Sbjct: 121 PPPPLPTKLLGGSKAVRRVPEVLELYRLVTKRDAQKENKATNGGFPAVAFTKNMIGEIEN 180

Query: 181 RSAYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGELASLVDERAVLKH 240
           RSAYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGELASLVDERAVLKH
Sbjct: 181 RSAYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGELASLVDERAVLKH 240

Query: 241 FPRWPEGKADALREAAFSYKDLKSLEAEVCSFRENPKEETNAMLKRAQALQDRLEQSVSN 300
           FPRWPEGKADALREAAFSYKDLKSLEAEVCSFRENPKEETNAMLKRAQALQDRLEQSVSN
Sbjct: 241 FPRWPEGKADALREAAFSYKDLKSLEAEVCSFRENPKEETNAMLKRAQALQDRLEQSVSN 300

Query: 301 VERTREFNCNKYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRITKELQLNETPQTEN 360
           VERTREFNCNKYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRITKELQLNETPQTEN
Sbjct: 301 VERTREFNCNKYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRITKELQLNETPQTEN 360

Query: 361 LFLQGVRFAYRVHQYAGGFDSEAIVAFEGMKQVGLLLSQRK 402
           LFLQGVRFAYRVHQYAGGFDSEAIVAFEGMKQVGLLLSQRK
Sbjct: 361 LFLQGVRFAYRVHQYAGGFDSEAIVAFEGMKQVGLLLSQRK 401

[Close]

BLAST of CmaCh01G006840 vs. ExPASy TrEMBL
Match: A0A6J1G8X0 (protein CHUP1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452021 PE=4 SV=1)

HSP 1 Score: 745.0 bits (1922), Expect = 1.7e-211
Identity = 386/401 (96.26%), Postives = 389/401 (97.01%), Query Frame = 0


Query: 1   MPMEEDEELAMEIDALKRELEISLQKSNFLEKENQELKQELARFKSHLQSLKPHNNDRKS 60
           MPMEEDEELAMEI ALKRELEISLQKS FLEKENQELKQELARFKSH+ SLK HNNDRKS
Sbjct: 1   MPMEEDEELAMEIHALKRELEISLQKSIFLEKENQELKQELARFKSHIHSLKAHNNDRKS 60

Query: 61  ILWKKFHNSMDVAVAGTDSSPQSPPATDKWETTRTQKQSNWAVVKENQRMAAAAPTPAPP 120
           ILWKKFHNSMD  VAG DS+PQSPPATDKWETTRTQKQSNWAVVKENQRMAAAAPTPAPP
Sbjct: 61  ILWKKFHNSMD--VAGNDSTPQSPPATDKWETTRTQKQSNWAVVKENQRMAAAAPTPAPP 120

Query: 121 PPPPLPTKLLGGSKAVRRVPEVLELYRLVTKRDAQKENKATNGGFPAVAFTKNMIGEIEN 180
           PPPPLPTKLLGGSKAVRRVPEVLELYRLVTKRDAQKENKA NGGFPAVAFTKNMIGEIEN
Sbjct: 121 PPPPLPTKLLGGSKAVRRVPEVLELYRLVTKRDAQKENKAANGGFPAVAFTKNMIGEIEN 180

Query: 181 RSAYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGELASLVDERAVLKH 240
           RSAYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGELASLVDERAVLKH
Sbjct: 181 RSAYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGELASLVDERAVLKH 240

Query: 241 FPRWPEGKADALREAAFSYKDLKSLEAEVCSFRENPKEETNAMLKRAQALQDRLEQSVSN 300
           FPRWPEGKADALREAAFSYKDLKSLE EVCSFRENPKEETNAMLKRAQALQDRLEQSVSN
Sbjct: 241 FPRWPEGKADALREAAFSYKDLKSLEGEVCSFRENPKEETNAMLKRAQALQDRLEQSVSN 300

Query: 301 VERTREFNCNKYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRITKELQLNETPQTEN 360
           VERTREFNC KYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRITKE QLNETPQTEN
Sbjct: 301 VERTREFNCKKYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRITKEKQLNETPQTEN 360

Query: 361 LFLQGVRFAYRVHQYAGGFDSEAIVAFEGMKQVGLLLSQRK 402
           LFLQGVRFAYRVHQYAGGFDSEAIVAFEGMKQVGL L+QRK
Sbjct: 361 LFLQGVRFAYRVHQYAGGFDSEAIVAFEGMKQVGLQLNQRK 399

[Close]

BLAST of CmaCh01G006840 vs. ExPASy TrEMBL
Match: A0A0A0LVK7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532360 PE=4 SV=1)

HSP 1 Score: 593.6 bits (1529), Expect = 6.2e-166
Identity = 309/403 (76.67%), Postives = 345/403 (85.61%), Query Frame = 0


Query: 1   MPMEEDEELAMEIDALKRELEISLQKSNFLEKENQELKQELARFKSHLQSLKPHNNDRKS 60
           MP EEDE LAMEI+ LK+ELEISLQKS FLEKENQEL+QEL R +S +QS K  NN+RKS
Sbjct: 1   MPKEEDEVLAMEINCLKKELEISLQKSIFLEKENQELRQELNRLRSQIQSFKAQNNERKS 60

Query: 61  ILWKKFHNSMDVAVAGTDSSPQSPP--ATDKWETTRTQKQSNWAVVKENQRMAAAAPTPA 120
           ILWKKFH+S+D++VAG DS P SP   A DK E+T++ KQS+W  VKE+ RM     +P 
Sbjct: 61  ILWKKFHSSIDISVAGADSPPLSPATVAGDKRESTKSPKQSSWDDVKESHRMTGVPASPP 120

Query: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRLVTKRDAQKENKATNGGFPAVAFTKNMIGEI 180
           PPPPPPLPTKLLGGSKAVRRVPEVLELYR +TKRDAQKENK  +GG PAVAFTKNMIGEI
Sbjct: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVAHGGAPAVAFTKNMIGEI 180

Query: 181 ENRSAYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGELASLVDERAVL 240
           ENRSAYLSAIKSEVETHG+FVN LI+EVE  APRDI+EVERFVKWLDG+LASLVDERAVL
Sbjct: 181 ENRSAYLSAIKSEVETHGDFVNWLIKEVETIAPRDISEVERFVKWLDGKLASLVDERAVL 240

Query: 241 KHFPRWPEGKADALREAAFSYKDLKSLEAEVCSFRENPKEETNAMLKRAQALQDRLEQSV 300
           K+FPRWPE KADALREAAFSY+DLK LE++VC FR+NPKEE N +LKRAQALQDR+EQSV
Sbjct: 241 KYFPRWPEAKADALREAAFSYRDLKGLESKVCMFRDNPKEEMNVVLKRAQALQDRVEQSV 300

Query: 301 SNVERTREFNCNKYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRITKELQLNETPQT 360
           SN+ERTREFNC KY  FQIPCQWM DS LP Q+K+S+LRL KE M RIT+ELQ  ETPQ 
Sbjct: 301 SNMERTREFNCRKYQAFQIPCQWMFDSALPTQIKMSTLRLAKEYMIRITRELQSTETPQR 360

Query: 361 ENLFLQGVRFAYRVHQYAGGFDSEAIVAFEGMKQVGLLLSQRK 402
           ENLFLQG RFAYRVHQYAGGFDSE I AFEG+K+ G L SQRK
Sbjct: 361 ENLFLQGARFAYRVHQYAGGFDSETIEAFEGLKKAG-LSSQRK 402

[Close]

BLAST of CmaCh01G006840 vs. ExPASy TrEMBL
Match: A0A6J1DC83 (protein CHUP1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111018994 PE=4 SV=1)

HSP 1 Score: 590.9 bits (1522), Expect = 4.0e-165
Identity = 312/404 (77.23%), Postives = 347/404 (85.89%), Query Frame = 0


Query: 1   MPMEEDEELAMEIDALKRELEISLQKSNFLEKENQELKQELARFKSHLQSLKPHNNDRKS 60
           MP EEDEELAMEI +L++EL+I++ KS+FLEKENQEL+QEL R KS +QSLK HNNDRKS
Sbjct: 1   MPQEEDEELAMEITSLRKELQIAVDKSDFLEKENQELRQELGRLKSQIQSLKAHNNDRKS 60

Query: 61  ILWKKFHNSMDVAVAGTDSSPQSPPATDKWETTRTQ-KQSNWAVVKENQRMAAAAPTPAP 120
           +LWKKF+NSMD          +SPPATDK E T++  KQ  W  VKE+QRM   AP PAP
Sbjct: 61  LLWKKFYNSMDA---------ESPPATDKREATKSSPKQPVWVAVKESQRMPEGAPAPAP 120

Query: 121 -PPPPPLPTKLLGGSKAVRRVPEVLELYRLVTKRDAQKENKATNGGFPAVAFTKNMIGEI 180
            PPPPPLPTKLL GSKAVRRVPEVLELYR +TKRDAQKENKA +GGFPAVAFTKNMIGEI
Sbjct: 121 APPPPPLPTKLLAGSKAVRRVPEVLELYRSLTKRDAQKENKAAHGGFPAVAFTKNMIGEI 180

Query: 181 ENRSAYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGELASLVDERAVL 240
           ENRSAYL+AIKSEVETHGEFVN LI+EVE AAPRDI EVERFV WLD EL SLVDERAVL
Sbjct: 181 ENRSAYLTAIKSEVETHGEFVNWLIKEVEGAAPRDITEVERFVNWLDRELGSLVDERAVL 240

Query: 241 KHFPRWPEGKADALREAAFSYKDLKSLEAEVCSFRENPKEETNAMLKRAQALQDRLEQSV 300
           KHFPRWPEGKADALREAAFSY+DLKSLE+EVCSFR+NPKEE   +LKRAQALQDRLEQSV
Sbjct: 241 KHFPRWPEGKADALREAAFSYRDLKSLESEVCSFRDNPKEEMGVVLKRAQALQDRLEQSV 300

Query: 301 SNVERTREFNCNKYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRITKELQ-LNETPQ 360
           SNVE+TREF+CNKY  F+IPC+WM +SGL  QMKLSSLRL KE MRRIT+ELQ ++ T Q
Sbjct: 301 SNVEKTREFSCNKYRNFRIPCEWMFESGLVGQMKLSSLRLAKEYMRRITRELQSIDNTQQ 360

Query: 361 TENLFLQGVRFAYRVHQYAGGFDSEAIVAFEGMKQVGLLLSQRK 402
            +NL LQGVRFAYRVHQYAGGFDS+AI AFEG+K+VG L SQRK
Sbjct: 361 ADNLLLQGVRFAYRVHQYAGGFDSDAIAAFEGLKKVG-LSSQRK 394

[Close]

BLAST of CmaCh01G006840 vs. ExPASy TrEMBL
Match: A0A1S3C4V9 (protein CHUP1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497059 PE=4 SV=1)

HSP 1 Score: 585.9 bits (1509), Expect = 1.3e-163
Identity = 309/403 (76.67%), Postives = 343/403 (85.11%), Query Frame = 0


Query: 1   MPMEEDEELAMEIDALKRELEISLQKSNFLEKENQELKQELARFKSHLQSLKPHNNDRKS 60
           MP E+DEELAMEID LK++LEISLQKS FLE+ENQEL+ EL R KS +QSLK  NN+RKS
Sbjct: 1   MPKEKDEELAMEIDCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS 60

Query: 61  ILWKKFHNSMDVAVAGTDSSPQSP--PATDKWETTRTQKQSNWAVVKENQRMAAAAPTPA 120
           ILWKKFH+SMD+AVAG DS P +P   A DK E T+  KQS+W  VKE+QRM A   +  
Sbjct: 61  ILWKKFHSSMDMAVAGADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP 120

Query: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRLVTKRDAQKENKATNGGFPAVAFTKNMIGEI 180
           PPPPPPLP KLLGGSKAVRRVPEVL+LYR +TKRDAQKENK  +GG P VAFTKNMIGEI
Sbjct: 121 PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI 180

Query: 181 ENRSAYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGELASLVDERAVL 240
           ENRSAYLSAIKSEVETHGEFVN LI+EVE  APRDI+E E+FVKWLD +LASLVDERAVL
Sbjct: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVL 240

Query: 241 KHFPRWPEGKADALREAAFSYKDLKSLEAEVCSFRENPKEETNAMLKRAQALQDRLEQSV 300
           KHFPRWPE KADALREAAFSY+DLKSLE++VC FR+NPKEE N +LKRAQALQDR+EQSV
Sbjct: 241 KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDRVEQSV 300

Query: 301 SNVERTREFNCNKYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRITKELQLNETPQT 360
           SN+ERTREFNC KY  FQIPCQWM DS LP Q+KLS+LRL KE M RIT+EL+  ET Q 
Sbjct: 301 SNMERTREFNCKKYQAFQIPCQWMFDSALPTQIKLSTLRLAKEYMIRITRELRSTETSQA 360

Query: 361 ENLFLQGVRFAYRVHQYAGGFDSEAIVAFEGMKQVGLLLSQRK 402
           ENLFLQGVRFAYRVHQYAGGFDSEAI AFEG+K+ G L SQRK
Sbjct: 361 ENLFLQGVRFAYRVHQYAGGFDSEAIEAFEGLKKAG-LSSQRK 402

[Close]

BLAST of CmaCh01G006840 vs. NCBI nr
Match: XP_022998607.1 (protein CHUP1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 780.0 bits (2013), Expect = 9.7e-222
Identity = 401/401 (100.00%), Postives = 401/401 (100.00%), Query Frame = 0


Query: 1   MPMEEDEELAMEIDALKRELEISLQKSNFLEKENQELKQELARFKSHLQSLKPHNNDRKS 60
           MPMEEDEELAMEIDALKRELEISLQKSNFLEKENQELKQELARFKSHLQSLKPHNNDRKS
Sbjct: 1   MPMEEDEELAMEIDALKRELEISLQKSNFLEKENQELKQELARFKSHLQSLKPHNNDRKS 60

Query: 61  ILWKKFHNSMDVAVAGTDSSPQSPPATDKWETTRTQKQSNWAVVKENQRMAAAAPTPAPP 120
           ILWKKFHNSMDVAVAGTDSSPQSPPATDKWETTRTQKQSNWAVVKENQRMAAAAPTPAPP
Sbjct: 61  ILWKKFHNSMDVAVAGTDSSPQSPPATDKWETTRTQKQSNWAVVKENQRMAAAAPTPAPP 120

Query: 121 PPPPLPTKLLGGSKAVRRVPEVLELYRLVTKRDAQKENKATNGGFPAVAFTKNMIGEIEN 180
           PPPPLPTKLLGGSKAVRRVPEVLELYRLVTKRDAQKENKATNGGFPAVAFTKNMIGEIEN
Sbjct: 121 PPPPLPTKLLGGSKAVRRVPEVLELYRLVTKRDAQKENKATNGGFPAVAFTKNMIGEIEN 180

Query: 181 RSAYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGELASLVDERAVLKH 240
           RSAYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGELASLVDERAVLKH
Sbjct: 181 RSAYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGELASLVDERAVLKH 240

Query: 241 FPRWPEGKADALREAAFSYKDLKSLEAEVCSFRENPKEETNAMLKRAQALQDRLEQSVSN 300
           FPRWPEGKADALREAAFSYKDLKSLEAEVCSFRENPKEETNAMLKRAQALQDRLEQSVSN
Sbjct: 241 FPRWPEGKADALREAAFSYKDLKSLEAEVCSFRENPKEETNAMLKRAQALQDRLEQSVSN 300

Query: 301 VERTREFNCNKYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRITKELQLNETPQTEN 360
           VERTREFNCNKYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRITKELQLNETPQTEN
Sbjct: 301 VERTREFNCNKYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRITKELQLNETPQTEN 360

Query: 361 LFLQGVRFAYRVHQYAGGFDSEAIVAFEGMKQVGLLLSQRK 402
           LFLQGVRFAYRVHQYAGGFDSEAIVAFEGMKQVGLLLSQRK
Sbjct: 361 LFLQGVRFAYRVHQYAGGFDSEAIVAFEGMKQVGLLLSQRK 401

[Close]

BLAST of CmaCh01G006840 vs. NCBI nr
Match: XP_023523072.1 (protein CHUP1, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo] >XP_023523080.1 protein CHUP1, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 766.1 bits (1977), Expect = 1.4e-217
Identity = 393/401 (98.00%), Postives = 396/401 (98.75%), Query Frame = 0


Query: 1   MPMEEDEELAMEIDALKRELEISLQKSNFLEKENQELKQELARFKSHLQSLKPHNNDRKS 60
           MPMEEDEELAMEIDALKRELEISLQKSNFLEKENQELKQELARFKSH+QSLK HNNDRKS
Sbjct: 1   MPMEEDEELAMEIDALKRELEISLQKSNFLEKENQELKQELARFKSHIQSLKAHNNDRKS 60

Query: 61  ILWKKFHNSMDVAVAGTDSSPQSPPATDKWETTRTQKQSNWAVVKENQRMAAAAPTPAPP 120
           ILWKKFHNSMDVAVAGTDSSPQSPPATDKWETTRTQKQSNWAVVKENQRMAAAAPTPAPP
Sbjct: 61  ILWKKFHNSMDVAVAGTDSSPQSPPATDKWETTRTQKQSNWAVVKENQRMAAAAPTPAPP 120

Query: 121 PPPPLPTKLLGGSKAVRRVPEVLELYRLVTKRDAQKENKATNGGFPAVAFTKNMIGEIEN 180
           PPPPLPTKLLGGSKAVRRVPEVLELYRLVTKRDAQKENKA NGGFPAVAFTKNMIGEIEN
Sbjct: 121 PPPPLPTKLLGGSKAVRRVPEVLELYRLVTKRDAQKENKAANGGFPAVAFTKNMIGEIEN 180

Query: 181 RSAYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGELASLVDERAVLKH 240
           RSAYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGEL SLVDERAVLKH
Sbjct: 181 RSAYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGELGSLVDERAVLKH 240

Query: 241 FPRWPEGKADALREAAFSYKDLKSLEAEVCSFRENPKEETNAMLKRAQALQDRLEQSVSN 300
           FPRWPEGKADALREAAFSYKDLKSLEAEVCSFRENPKEETNAMLKRAQALQDRLEQSVSN
Sbjct: 241 FPRWPEGKADALREAAFSYKDLKSLEAEVCSFRENPKEETNAMLKRAQALQDRLEQSVSN 300

Query: 301 VERTREFNCNKYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRITKELQLNETPQTEN 360
           VERTREFNC KYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRITKE+QLNETPQTEN
Sbjct: 301 VERTREFNCKKYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRITKEIQLNETPQTEN 360

Query: 361 LFLQGVRFAYRVHQYAGGFDSEAIVAFEGMKQVGLLLSQRK 402
           LFLQGVRFAYRVHQYAGGFDSEAIVAFEGMKQVGL L+QRK
Sbjct: 361 LFLQGVRFAYRVHQYAGGFDSEAIVAFEGMKQVGLQLNQRK 401

[Close]

BLAST of CmaCh01G006840 vs. NCBI nr
Match: KAG6607325.1 (Protein CHUP1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 750.7 bits (1937), Expect = 6.3e-213
Identity = 388/401 (96.76%), Postives = 392/401 (97.76%), Query Frame = 0


Query: 1   MPMEEDEELAMEIDALKRELEISLQKSNFLEKENQELKQELARFKSHLQSLKPHNNDRKS 60
           MPMEEDEELAMEI ALKRELEISLQKSNFLEKENQELKQELARFKSH+QSLK HNNDRKS
Sbjct: 1   MPMEEDEELAMEIHALKRELEISLQKSNFLEKENQELKQELARFKSHVQSLKVHNNDRKS 60

Query: 61  ILWKKFHNSMDVAVAGTDSSPQSPPATDKWETTRTQKQSNWAVVKENQRMAAAAPTPAPP 120
           ILWKKFHNSMD  VAG DS+PQSPPATDKWETTRTQKQSNWAVVKENQRMAAAAPTPAPP
Sbjct: 61  ILWKKFHNSMD--VAGNDSTPQSPPATDKWETTRTQKQSNWAVVKENQRMAAAAPTPAPP 120

Query: 121 PPPPLPTKLLGGSKAVRRVPEVLELYRLVTKRDAQKENKATNGGFPAVAFTKNMIGEIEN 180
           PPPPLPTKLLGGSKAVRRVPEVLELYRLVTKRDAQKENKA NGGFPAVAFTKNMIGEIEN
Sbjct: 121 PPPPLPTKLLGGSKAVRRVPEVLELYRLVTKRDAQKENKAANGGFPAVAFTKNMIGEIEN 180

Query: 181 RSAYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGELASLVDERAVLKH 240
           RSAYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGELASLVDERAVLKH
Sbjct: 181 RSAYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGELASLVDERAVLKH 240

Query: 241 FPRWPEGKADALREAAFSYKDLKSLEAEVCSFRENPKEETNAMLKRAQALQDRLEQSVSN 300
           FPRWPEGKADALREAAFSYKDLKSLE EVCSFRENPKEETNAMLKRAQALQDRLEQSVSN
Sbjct: 241 FPRWPEGKADALREAAFSYKDLKSLEGEVCSFRENPKEETNAMLKRAQALQDRLEQSVSN 300

Query: 301 VERTREFNCNKYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRITKELQLNETPQTEN 360
           VERTREFNC KYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRITKE+QLNETPQTEN
Sbjct: 301 VERTREFNCKKYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRITKEVQLNETPQTEN 360

Query: 361 LFLQGVRFAYRVHQYAGGFDSEAIVAFEGMKQVGLLLSQRK 402
           LFLQGVRFAYRVHQYAGGFDSEAIVAFEGMKQVGL L+QRK
Sbjct: 361 LFLQGVRFAYRVHQYAGGFDSEAIVAFEGMKQVGLQLNQRK 399

[Close]

BLAST of CmaCh01G006840 vs. NCBI nr
Match: XP_022948306.1 (protein CHUP1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 745.0 bits (1922), Expect = 3.5e-211
Identity = 386/401 (96.26%), Postives = 389/401 (97.01%), Query Frame = 0


Query: 1   MPMEEDEELAMEIDALKRELEISLQKSNFLEKENQELKQELARFKSHLQSLKPHNNDRKS 60
           MPMEEDEELAMEI ALKRELEISLQKS FLEKENQELKQELARFKSH+ SLK HNNDRKS
Sbjct: 1   MPMEEDEELAMEIHALKRELEISLQKSIFLEKENQELKQELARFKSHIHSLKAHNNDRKS 60

Query: 61  ILWKKFHNSMDVAVAGTDSSPQSPPATDKWETTRTQKQSNWAVVKENQRMAAAAPTPAPP 120
           ILWKKFHNSMD  VAG DS+PQSPPATDKWETTRTQKQSNWAVVKENQRMAAAAPTPAPP
Sbjct: 61  ILWKKFHNSMD--VAGNDSTPQSPPATDKWETTRTQKQSNWAVVKENQRMAAAAPTPAPP 120

Query: 121 PPPPLPTKLLGGSKAVRRVPEVLELYRLVTKRDAQKENKATNGGFPAVAFTKNMIGEIEN 180
           PPPPLPTKLLGGSKAVRRVPEVLELYRLVTKRDAQKENKA NGGFPAVAFTKNMIGEIEN
Sbjct: 121 PPPPLPTKLLGGSKAVRRVPEVLELYRLVTKRDAQKENKAANGGFPAVAFTKNMIGEIEN 180

Query: 181 RSAYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGELASLVDERAVLKH 240
           RSAYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGELASLVDERAVLKH
Sbjct: 181 RSAYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGELASLVDERAVLKH 240

Query: 241 FPRWPEGKADALREAAFSYKDLKSLEAEVCSFRENPKEETNAMLKRAQALQDRLEQSVSN 300
           FPRWPEGKADALREAAFSYKDLKSLE EVCSFRENPKEETNAMLKRAQALQDRLEQSVSN
Sbjct: 241 FPRWPEGKADALREAAFSYKDLKSLEGEVCSFRENPKEETNAMLKRAQALQDRLEQSVSN 300

Query: 301 VERTREFNCNKYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRITKELQLNETPQTEN 360
           VERTREFNC KYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRITKE QLNETPQTEN
Sbjct: 301 VERTREFNCKKYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRITKEKQLNETPQTEN 360

Query: 361 LFLQGVRFAYRVHQYAGGFDSEAIVAFEGMKQVGLLLSQRK 402
           LFLQGVRFAYRVHQYAGGFDSEAIVAFEGMKQVGL L+QRK
Sbjct: 361 LFLQGVRFAYRVHQYAGGFDSEAIVAFEGMKQVGLQLNQRK 399

[Close]

BLAST of CmaCh01G006840 vs. NCBI nr
Match: KAG7037002.1 (Protein CHUP1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 687.6 bits (1773), Expect = 6.6e-194
Identity = 365/405 (90.12%), Postives = 373/405 (92.10%), Query Frame = 0


Query: 3   MEEDEELAMEIDALKRELEISLQKSNFLEKENQELKQELARFKSHLQSLKPHNNDRKSIL 62
           MEEDEELAMEI ALKRELEISLQKSNFLEKENQELKQELARFKSH+QSLK HNNDRKSIL
Sbjct: 1   MEEDEELAMEIHALKRELEISLQKSNFLEKENQELKQELARFKSHVQSLKVHNNDRKSIL 60

Query: 63  WKKFHNSMDVAVAGTDSSPQSPPATDKWETTRTQKQSNWAVVKENQRMAAAAPTPAPPPP 122
           WKKFHNSMD  VAG DS+PQSPPATDKWETTRTQKQSNWAVVKENQRMAAAAPTPAPPPP
Sbjct: 61  WKKFHNSMD--VAGNDSTPQSPPATDKWETTRTQKQSNWAVVKENQRMAAAAPTPAPPPP 120

Query: 123 PPLPTKLLGGSKAVRRVPEVLELYRLVTKRDAQKENKATNGGFPAVAFTKNMIGEIENRS 182
           PPLPTKLLGGSKAVRRVPEVLELYRLVTKRDAQKENKA NGGFPAVAFTKNMIGEIENRS
Sbjct: 121 PPLPTKLLGGSKAVRRVPEVLELYRLVTKRDAQKENKAANGGFPAVAFTKNMIGEIENRS 180

Query: 183 AYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGELASLVDERAVLKHFP 242
           AYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGELASLVDERAVLKHFP
Sbjct: 181 AYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGELASLVDERAVLKHFP 240

Query: 243 RWPEGKADALREAAFSYKDLKSLEAE-----VCSFRENPKEETNAMLKRAQALQ-DRLEQ 302
           RWPEGKADALREAAFSYKDLKSLE E     V       K+      +  + L+  RLEQ
Sbjct: 241 RWPEGKADALREAAFSYKDLKSLEGEHVQSVVFHVSNKVKQSWEVTDELEKCLELCRLEQ 300

Query: 303 SVSNVERTREFNCNKYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRITKELQLNETP 362
           SVSNVERTREFNC KYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRITKE+QLNETP
Sbjct: 301 SVSNVERTREFNCKKYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRITKEVQLNETP 360

Query: 363 QTENLFLQGVRFAYRVHQYAGGFDSEAIVAFEGMKQVGLLLSQRK 402
           QTENLFLQGVRFAYRVHQYAGGFDSEAIVAFEGMKQVGL L+QRK
Sbjct: 361 QTENLFLQGVRFAYRVHQYAGGFDSEAIVAFEGMKQVGLQLNQRK 403

[Close]

BLAST of CmaCh01G006840 vs. TAIR 10
Match: AT1G07120.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: inflorescence meristem, petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G18570.1); Has 288 Blast hits to 260 proteins in 50 species: Archae - 0; Bacteria - 8; Metazoa - 27; Fungi - 15; Plants - 163; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). )

HSP 1 Score: 349.4 bits (895), Expect = 3.9e-96
Identity = 194/393 (49.36%), Postives = 265/393 (67.43%), Query Frame = 0


Query: 1   MPMEEDEELAMEIDALKRELEISLQKSNFLEKENQELKQELARFKSHLQSLKPHNNDRKS 60
           +P  ED+    ++  L +EL+  L +++ LEKEN EL+QE+AR ++ + +LK H N+RKS
Sbjct: 2   LPNGEDDS---DLLRLVKELQAYLVRNDKLEKENHELRQEVARLRAQVSNLKSHENERKS 61

Query: 61  ILWKKFHNSMDVAVAGTDSSPQSPPATDKWETTRTQKQSNWAVVKENQRMAAAAPTPAPP 120
           +LWKK  +S D   + TD S    P + K   T+ Q+  N         +   +    PP
Sbjct: 62  MLWKKLQSSYD--GSNTDGSNLKAPESVK-SNTKGQEVRN---PNPKPTIQGQSTATKPP 121

Query: 121 PPPPLPTKLLGGSKAVRRVPEVLELYRLVTKRDAQKENKATNGGFPAVAFTKNMIGEIEN 180
           PPPPLP+K   G ++VRR PEV+E YR +TKR++   NK    G  + AF +NMIGEIEN
Sbjct: 122 PPPPLPSKRTLGKRSVRRAPEVVEFYRALTKRESHMGNKINQNGVLSPAFNRNMIGEIEN 181

Query: 181 RSAYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGELASLVDERAVLKH 240
           RS YLS IKS+ + H + ++ LI +VEAA   DI+EVE FVKW+D EL+SLVDERAVLKH
Sbjct: 182 RSKYLSDIKSDTDRHRDHIHILISKVEAATFTDISEVETFVKWIDEELSSLVDERAVLKH 241

Query: 241 FPRWPEGKADALREAAFSYKDLKSLEAEVCSFRENPKEETNAMLKRAQALQDRLEQSVSN 300
           FP+WPE K D+LREAA +YK  K+L  E+ SF++NPK+     L+R Q+LQDRLE+SV+N
Sbjct: 242 FPKWPERKVDSLREAACNYKRPKNLGNEILSFKDNPKDSLTQALQRIQSLQDRLEESVNN 301

Query: 301 VERTREFNCNKYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRITKELQLNETPQTEN 360
            E+ R+    +Y  FQIP +WMLD+GL  Q+K SSLRL +E M+RI KEL+ N + +  N
Sbjct: 302 TEKMRDSTGKRYKDFQIPWEWMLDTGLIGQLKYSSLRLAQEYMKRIAKELESNGSGKEGN 361

Query: 361 LFLQGVRFAYRVHQYAGGFDSEAIVAFEGMKQV 394
           L LQGVRFAY +HQ+AGGFD E +  F  +K++
Sbjct: 362 LMLQGVRFAYTIHQFAGGFDGETLSIFHELKKI 385

[Close]

BLAST of CmaCh01G006840 vs. TAIR 10
Match: AT4G18570.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 269.6 bits (688), Expect = 4.0e-72
Identity = 147/289 (50.87%), Postives = 198/289 (68.51%), Query Frame = 0


Query: 112 AAAPTPAPPPPPPLPTKLLGGSKAVRRVPEVLELYRLVTKRDAQKENKATNGGFPAVA-- 171
           + +  P PPPPPP P  L   S  VRRVPEV+E Y  + +RD+    + + GG  A A  
Sbjct: 329 SVSKAPPPPPPPPPPKSLSIASAKVRRVPEVVEFYHSLMRRDSTNSRRDSTGGGNAAAEA 388

Query: 172 -----FTKNMIGEIENRSAYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWL 231
                  ++MIGEIENRS YL AIK++VET G+F+  LI+EV  AA  DI +V  FVKWL
Sbjct: 389 ILANSNARDMIGEIENRSVYLLAIKTDVETQGDFIRFLIKEVGNAAFSDIEDVVPFVKWL 448

Query: 232 DGELASLVDERAVLKHFPRWPEGKADALREAAFSYKDLKSLEAEVCSFRENPKEETNAML 291
           D EL+ LVDERAVLKHF  WPE KADALREAAF Y DLK L +E   FRE+P++ +++ L
Sbjct: 449 DDELSYLVDERAVLKHF-EWPEQKADALREAAFCYFDLKKLISEASRFREDPRQSSSSAL 508

Query: 292 KRAQALQDRLEQSVSNVERTREFNCNKYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMR 351
           K+ QAL ++LE  V ++ R RE    K+  FQIP  WML++G+ +Q+KL+S++L  + M+
Sbjct: 509 KKMQALFEKLEHGVYSLSRMRESAATKFKSFQIPVDWMLETGITSQIKLASVKLAMKYMK 568

Query: 352 RITKELQLNE--TPQTENLFLQGVRFAYRVHQYAGGFDSEAIVAFEGMK 392
           R++ EL+  E   P+ E L +QGVRFA+RVHQ+AGGFD+E + AFE ++
Sbjct: 569 RVSAELEAIEGGGPEEEELIVQGVRFAFRVHQFAGGFDAETMKAFEELR 616

[Close]

BLAST of CmaCh01G006840 vs. TAIR 10
Match: AT3G25690.1 (Hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 248.4 bits (633), Expect = 9.5e-66
Identity = 139/287 (48.43%), Postives = 192/287 (66.90%), Query Frame = 0


Query: 115 PTPAPPPPPPLPTKL---LGGSKAVRRVPEVLELYRLVTKRDAQKE---NKATNGGFPAV 174
           P   PPPPPP P  L    GG   V R PE++E Y+ + KR+++KE   +  ++G   + 
Sbjct: 694 PGGGPPPPPPPPGALGRGAGGGNKVHRAPELVEFYQSLMKRESKKEGAPSLISSGTGNSS 753

Query: 175 AFTKNMIGEIENRSAYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGEL 234
           A   NMIGEIENRS +L A+K++VET G+FV  L  EV A++  DI ++  FV WLD EL
Sbjct: 754 AARNNMIGEIENRSTFLLAVKADVETQGDFVQSLATEVRASSFTDIEDLLAFVSWLDEEL 813

Query: 235 ASLVDERAVLKHFPRWPEGKADALREAAFSYKDLKSLEAEVCSFRENPKEETNAMLKRAQ 294
           + LVDERAVLKHF  WPEGKADALREAAF Y+DL  LE +V SF ++P       LK+  
Sbjct: 814 SFLVDERAVLKHFD-WPEGKADALREAAFEYQDLMKLEKQVTSFVDDPNLSCEPALKKMY 873

Query: 295 ALQDRLEQSVSNVERTREFNCNKYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRITK 354
            L +++EQSV  + RTR+   ++Y +F IP  W+ D+G+  ++KLSS++L K+ M+R+  
Sbjct: 874 KLLEKVEQSVYALLRTRDMAISRYKEFGIPVDWLSDTGVVGKIKLSSVQLAKKYMKRVAY 933

Query: 355 ELQ----LNETPQTENLFLQGVRFAYRVHQYAGGFDSEAIVAFEGMK 392
           EL      ++ P  E L LQGVRFA+RVHQ+AGGFD+E++ AFE ++
Sbjct: 934 ELDSVSGSDKDPNREFLLLQGVRFAFRVHQFAGGFDAESMKAFEELR 979

[Close]

BLAST of CmaCh01G006840 vs. TAIR 10
Match: AT3G25690.2 (Hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 248.4 bits (633), Expect = 9.5e-66
Identity = 139/287 (48.43%), Postives = 192/287 (66.90%), Query Frame = 0


Query: 115 PTPAPPPPPPLPTKL---LGGSKAVRRVPEVLELYRLVTKRDAQKE---NKATNGGFPAV 174
           P   PPPPPP P  L    GG   V R PE++E Y+ + KR+++KE   +  ++G   + 
Sbjct: 694 PGGGPPPPPPPPGALGRGAGGGNKVHRAPELVEFYQSLMKRESKKEGAPSLISSGTGNSS 753

Query: 175 AFTKNMIGEIENRSAYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGEL 234
           A   NMIGEIENRS +L A+K++VET G+FV  L  EV A++  DI ++  FV WLD EL
Sbjct: 754 AARNNMIGEIENRSTFLLAVKADVETQGDFVQSLATEVRASSFTDIEDLLAFVSWLDEEL 813

Query: 235 ASLVDERAVLKHFPRWPEGKADALREAAFSYKDLKSLEAEVCSFRENPKEETNAMLKRAQ 294
           + LVDERAVLKHF  WPEGKADALREAAF Y+DL  LE +V SF ++P       LK+  
Sbjct: 814 SFLVDERAVLKHFD-WPEGKADALREAAFEYQDLMKLEKQVTSFVDDPNLSCEPALKKMY 873

Query: 295 ALQDRLEQSVSNVERTREFNCNKYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRITK 354
            L +++EQSV  + RTR+   ++Y +F IP  W+ D+G+  ++KLSS++L K+ M+R+  
Sbjct: 874 KLLEKVEQSVYALLRTRDMAISRYKEFGIPVDWLSDTGVVGKIKLSSVQLAKKYMKRVAY 933

Query: 355 ELQ----LNETPQTENLFLQGVRFAYRVHQYAGGFDSEAIVAFEGMK 392
           EL      ++ P  E L LQGVRFA+RVHQ+AGGFD+E++ AFE ++
Sbjct: 934 ELDSVSGSDKDPNREFLLLQGVRFAFRVHQFAGGFDAESMKAFEELR 979

[Close]

BLAST of CmaCh01G006840 vs. TAIR 10
Match: AT3G25690.3 (Hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 248.4 bits (633), Expect = 9.5e-66
Identity = 139/287 (48.43%), Postives = 192/287 (66.90%), Query Frame = 0


Query: 115 PTPAPPPPPPLPTKL---LGGSKAVRRVPEVLELYRLVTKRDAQKE---NKATNGGFPAV 174
           P   PPPPPP P  L    GG   V R PE++E Y+ + KR+++KE   +  ++G   + 
Sbjct: 553 PGGGPPPPPPPPGALGRGAGGGNKVHRAPELVEFYQSLMKRESKKEGAPSLISSGTGNSS 612

Query: 175 AFTKNMIGEIENRSAYLSAIKSEVETHGEFVNRLIREVEAAAPRDIAEVERFVKWLDGEL 234
           A   NMIGEIENRS +L A+K++VET G+FV  L  EV A++  DI ++  FV WLD EL
Sbjct: 613 AARNNMIGEIENRSTFLLAVKADVETQGDFVQSLATEVRASSFTDIEDLLAFVSWLDEEL 672

Query: 235 ASLVDERAVLKHFPRWPEGKADALREAAFSYKDLKSLEAEVCSFRENPKEETNAMLKRAQ 294
           + LVDERAVLKHF  WPEGKADALREAAF Y+DL  LE +V SF ++P       LK+  
Sbjct: 673 SFLVDERAVLKHFD-WPEGKADALREAAFEYQDLMKLEKQVTSFVDDPNLSCEPALKKMY 732

Query: 295 ALQDRLEQSVSNVERTREFNCNKYNKFQIPCQWMLDSGLPAQMKLSSLRLVKECMRRITK 354
            L +++EQSV  + RTR+   ++Y +F IP  W+ D+G+  ++KLSS++L K+ M+R+  
Sbjct: 733 KLLEKVEQSVYALLRTRDMAISRYKEFGIPVDWLSDTGVVGKIKLSSVQLAKKYMKRVAY 792

Query: 355 ELQ----LNETPQTENLFLQGVRFAYRVHQYAGGFDSEAIVAFEGMK 392
           EL      ++ P  E L LQGVRFA+RVHQ+AGGFD+E++ AFE ++
Sbjct: 793 ELDSVSGSDKDPNREFLLLQGVRFAFRVHQFAGGFDAESMKAFEELR 838

The following BLAST results are available for this feature:

BLAST of CmaCh01G006840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LI74	1.3e-64	48.43	Protein CHUP1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CHUP1 PE=1 SV=1	[more]

BLAST of CmaCh01G006840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K8G4	4.7e-222	100.00	protein CHUP1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493194 PE=4 SV...	[more]
A0A6J1G8X0	1.7e-211	96.26	protein CHUP1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452021 PE=4 ...	[more]
A0A0A0LVK7	6.2e-166	76.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532360 PE=4 SV=1	[more]
A0A6J1DC83	4.0e-165	77.23	protein CHUP1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111018994 PE=4...	[more]
A0A1S3C4V9	1.3e-163	76.67	protein CHUP1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497059 ...	[more]

BLAST of CmaCh01G006840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022998607.1	9.7e-222	100.00	protein CHUP1, chloroplastic [Cucurbita maxima]	[more]
XP_023523072.1	1.4e-217	98.00	protein CHUP1, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo] >XP_0235230...	[more]
KAG6607325.1	6.3e-213	96.76	Protein CHUP1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022948306.1	3.5e-211	96.26	protein CHUP1, chloroplastic [Cucurbita moschata]	[more]
KAG7037002.1	6.6e-194	90.12	Protein CHUP1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]

BLAST of CmaCh01G006840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07120.1	3.9e-96	49.36	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT4G18570.1	4.0e-72	50.87	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G25690.1	9.5e-66	48.43	Hydroxyproline-rich glycoprotein family protein	[more]
AT3G25690.2	9.5e-66	48.43	Hydroxyproline-rich glycoprotein family protein	[more]
AT3G25690.3	9.5e-66	48.43	Hydroxyproline-rich glycoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 13..47
None	No IPR available	COILS	Coil	Coil	coord: 277..304
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..98
None	No IPR available	PANTHER	PTHR31342:SF48	CHUP1-LIKE PROTEIN	coord: 4..394
IPR040265	Protein CHUP1-like	PANTHER	PTHR31342	PROTEIN CHUP1, CHLOROPLASTIC	coord: 4..394

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G006840.1	CmaCh01G006840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
cellular_component	GO:0009707	chloroplast outer membrane