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CmaCh01G006420 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CATATACCCAATTCCCATCCCGTGCGAAGAGAAGGCAATCGAAAAGACGCCGTGCAGTGTCTGCCGCGCTCGTCCTGCTCTCCGTTGTTGCGATTTAATTGCAAACCTGTTCCTTCGCCACTGCAATAAAGATACCGGAGGAGGGGAATCGGATTCTTTAATCTCGATCGAGATCAACATTTTGGATTTCTCTTTGTTGTTTTTGGACTGTAAGCTATCCATTGCGCCGATTTTCTTTTTTTCGTTTTGCTTCTTCTTCTATTGTTTCCGGATAAAATGGTGATATTTTTCTGAAATTGTTCGGTAGCTCTGTGATATTACTTAGATTGTTAAGATTGCTACGAAATGAGACATCGCTGCGACGTTCTAGTTCTCTTATTTTAAACACTGTCAAGAGAAATCATTCTGCGAAGTTTGCGTTAAGAAATCTCCATGATTCGTAAACGCTTTCAAGAAGCTAAAACAGGTAAGTTACGAATAGTTTGTGCCTCATTTATTCCATATTTGGCTTTGATTTTGAGCTTGCCTACTTTCTGTTTGATAAATTGCTTGAAAGCAATATATATGTATATTGTTTATATATATTTTTCTTGGACTGGAATATCAGGCCTGCAACTGGTGAAATCGATGAGAGCCGAAAGGTTCTTGAAGAAAGTTGGATTGGGCAGAGAGGATCGTTACTTCTGGAAGCAAATTGGAAAGGCTCTGTTATTTTCGTATACTCTGATCGGTGTTGCATGGCTTTACAACGAAACATCACCATTTGGCTGGTGGACGCTGAAGCCACGGTCCAAGGCAGAGAAAGATTTGGCTCACCTCTATGAGCGTAGGGAGTTTCCATATCCAGGTTGTTAAAATCTCCGCATTATACCCAAAGATTTAAAGTTGATTGAAAATGAAATTGAGCTGCTGTATAAATTTCACTGATAGATGGAAAAAAAATTAGGGAAATTATAGAAGCCACTTAGAACAATAAGGGTGTTGCAATTGTATTTCAAAACTTCTATGCAATTAAACTACATCATTGTAACTTTGTGATGATTGAGTATAGTGTAACAATTCTTATAGTTTATGTGTTCTAATGTTTGACGGCAACAAACTTGTTGTTCTAAGTGGTTGGGCCTTTTTCAACTTGCAACGAACAGAATTGTTGCAAAACTGTTCAATTGCAACGAGTTCATCAGTTTGAGGATAATTGCTTGAATTTAAAGTTTGAGGGTGGGATTGTAATAACTAGTTAAGGTCGTGGATTAAGCTAAATCTAATCATTATGATATATTGTAAACCCAGGTGATGAAGAAGCTATGGAGGATTTCATTGCGAAGGGGGGAATGATCGGAACTGCCATCGGTCCAAAGGGGGTGATTGATTTTGATAAGGATTCTTTCAATTATCAGAAAGAATTAGAGAACAATAAGCTCGAGCAAGAGGCCCAGAAGCTATGGTTCAGGATGAGGAACGAGGTTATTTCAGAGCTTCAGGGGAAGGGCTACGATGTTGAGTGAGGTAATTCTTGAATGGAAGCATGAAAATTTCTGATTGCCTAATTTGTTCATGTGTTCTTGTTGTGAAAGTTCTGAATACCCATCTGCTTGAATGCTTCCTGTTTGATGCGTTTGCAGTCGTCTCTGTCATGTACTTGAATCTAAACACTAAAAGGATTAGTATTAGAGTTGAAAATTTCTGGCCTTTTGATATCAATCCCTATGGATTGGTTTTAAGTTTTTAATCGATACTTGGTTCATCGATTCTCTCAAATGTTCTAACTTTTCACTAATGATCTTATATAGCCAAATTAGTAACTTGCATCCAATTTCGAACCATTGTCTTTTCAAGATAAAGTTTTATTACCATGGCTTAATCCTTTTATTGCCAATGTTTTTGTGAAAATTTGATGTTATCTCGGGAATGATGGGAATTTCTTATTAGTTAGTGTTATATAACTAGATTCTTGTTGAATATAATATTACACCTTGGCAACCTTTGACAGCTAAGAATAGCTTTTCGGTCAAAATCAATGGTAATTACTTTCCTATCAAAGTGGTCGATGGTGGTCGATGGTGATCGGTTACCACTATCAGGTAGATTGAATAAGAAGATTGCTCTAGTTGATGTATTCCGAAAAAAAGTGAGAATACAGAACTGTGAACTCTCTAACACATTAAACTATGACCATTAAGGAGTAATTTATCTTATCGTGGTGACATACGACAGTAGGCTTGAAAATGCAACGCAGCATTTATTTATTAGAGATTGGGTCTATAGTTTTTAGAATTAAGGAAATTAAAGCTTTGGTTGATTATCATTTGGATTTTGATTTCTAGGTTTTGAAAACAAAGCTGGTAAAGAAATTGCAGAGAGTACTGTATTAAAGGTATGGTAAGAAAACAAGTATAATTTTAAAATAATAATAATAAATGGTTATCAAACTCTCAAAAGTTCTTTATTTTGTTATCAAATCTCTAATATCTTTTATAAATACCCATAAAACATAAAATACAAAAATACAAAATAAATAAATAAATAAATAATCATATATTAATGATTTGTAATTGATTATTTGTTCATTTATATAGTTTGGTTACTTGCTAG CATATACCCAATTCCCATCCCGTGCGAAGAGAAGGCAATCGAAAAGACGCCGTGCAGTGTCTGCCGCGCTCGTCCTGCTCTCCGTTGTTGCGATTTAATTGCAAACCTGTTCCTTCGCCACTGCAATAAAGATACCGGAGGAGGGGAATCGGATTCTTTAATCTCGATCGAGATCAACATTTTGGATTTCTCTTTGTTGTTTTTGGACTCTCTGTGATATTACTTAGATTGTTAAGATTGCTACGAAATGAGACATCGCTGCGACGTTCTAGTTCTCTTATTTTAAACACTGTCAAGAGAAATCATTCTGCGAAGTTTGCGTTAAGAAATCTCCATGATTCGTAAACGCTTTCAAGAAGCTAAAACAGGCCTGCAACTGGTGAAATCGATGAGAGCCGAAAGGTTCTTGAAGAAAGTTGGATTGGGCAGAGAGGATCGTTACTTCTGGAAGCAAATTGGAAAGGCTCTGTTATTTTCGTATACTCTGATCGGTGTTGCATGGCTTTACAACGAAACATCACCATTTGGCTGGTGGACGCTGAAGCCACGGTCCAAGGCAGAGAAAGATTTGGCTCACCTCTATGAGCGTAGGGAGTTTCCATATCCAGGTGATGAAGAAGCTATGGAGGATTTCATTGCGAAGGGGGGAATGATCGGAACTGCCATCGGTCCAAAGGGGGTGATTGATTTTGATAAGGATTCTTTCAATTATCAGAAAGAATTAGAGAACAATAAGCTCGAGCAAGAGGCCCAGAAGCTATGGTTCAGGATGAGGAACGAGGTTATTTCAGAGCTTCAGGGGAAGGGCTACGATGTTGATTTGGTTACTTGCTAG ATGATTCGTAAACGCTTTCAAGAAGCTAAAACAGGCCTGCAACTGGTGAAATCGATGAGAGCCGAAAGGTTCTTGAAGAAAGTTGGATTGGGCAGAGAGGATCGTTACTTCTGGAAGCAAATTGGAAAGGCTCTGTTATTTTCGTATACTCTGATCGGTGTTGCATGGCTTTACAACGAAACATCACCATTTGGCTGGTGGACGCTGAAGCCACGGTCCAAGGCAGAGAAAGATTTGGCTCACCTCTATGAGCGTAGGGAGTTTCCATATCCAGGTGATGAAGAAGCTATGGAGGATTTCATTGCGAAGGGGGGAATGATCGGAACTGCCATCGGTCCAAAGGGGGTGATTGATTTTGATAAGGATTCTTTCAATTATCAGAAAGAATTAGAGAACAATAAGCTCGAGCAAGAGGCCCAGAAGCTATGGTTCAGGATGAGGAACGAGGTTATTTCAGAGCTTCAGGGGAAGGGCTACGATGTTGATTTGGTTACTTGCTAG MIRKRFQEAKTGLQLVKSMRAERFLKKVGLGREDRYFWKQIGKALLFSYTLIGVAWLYNETSPFGWWTLKPRSKAEKDLAHLYERREFPYPGDEEAMEDFIAKGGMIGTAIGPKGVIDFDKDSFNYQKELENNKLEQEAQKLWFRMRNEVISELQGKGYDVDLVTC Homology
BLAST of CmaCh01G006420 vs. ExPASy TrEMBL
Match: A0A6J1KD63 (uncharacterized protein LOC111493271 OS=Cucurbita maxima OX=3661 GN=LOC111493271 PE=4 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 8.2e-88 Identity = 161/162 (99.38%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of CmaCh01G006420 vs. ExPASy TrEMBL
Match: A0A6J1G9K9 (uncharacterized protein LOC111452054 OS=Cucurbita moschata OX=3662 GN=LOC111452054 PE=4 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 4.1e-87 Identity = 160/162 (98.77%), Postives = 161/162 (99.38%), Query Frame = 0
BLAST of CmaCh01G006420 vs. ExPASy TrEMBL
Match: A0A0A0LY68 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G528470 PE=4 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 1.0e-82 Identity = 149/162 (91.98%), Postives = 158/162 (97.53%), Query Frame = 0
BLAST of CmaCh01G006420 vs. ExPASy TrEMBL
Match: A0A6J1HJ79 (uncharacterized protein LOC111464959 OS=Cucurbita moschata OX=3662 GN=LOC111464959 PE=4 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 3.3e-81 Identity = 148/162 (91.36%), Postives = 156/162 (96.30%), Query Frame = 0
BLAST of CmaCh01G006420 vs. ExPASy TrEMBL
Match: A0A1S3C5F1 (uncharacterized protein LOC103497102 OS=Cucumis melo OX=3656 GN=LOC103497102 PE=4 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 2.2e-80 Identity = 145/162 (89.51%), Postives = 155/162 (95.68%), Query Frame = 0
BLAST of CmaCh01G006420 vs. NCBI nr
Match: XP_022998684.1 (uncharacterized protein LOC111493271 [Cucurbita maxima] >XP_022998685.1 uncharacterized protein LOC111493271 [Cucurbita maxima] >XP_022998686.1 uncharacterized protein LOC111493271 [Cucurbita maxima]) HSP 1 Score: 332.8 bits (852), Expect = 1.7e-87 Identity = 161/162 (99.38%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of CmaCh01G006420 vs. NCBI nr
Match: XP_023523491.1 (uncharacterized protein LOC111787692 [Cucurbita pepo subsp. pepo] >XP_023523492.1 uncharacterized protein LOC111787692 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 330.5 bits (846), Expect = 8.4e-87 Identity = 159/162 (98.15%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of CmaCh01G006420 vs. NCBI nr
Match: XP_022948350.1 (uncharacterized protein LOC111452054 [Cucurbita moschata] >XP_022948351.1 uncharacterized protein LOC111452054 [Cucurbita moschata] >XP_022948352.1 uncharacterized protein LOC111452054 [Cucurbita moschata] >KAG6607290.1 hypothetical protein SDJN03_00632, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036967.1 hypothetical protein SDJN02_00587 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 330.5 bits (846), Expect = 8.4e-87 Identity = 160/162 (98.77%), Postives = 161/162 (99.38%), Query Frame = 0
BLAST of CmaCh01G006420 vs. NCBI nr
Match: XP_004154327.1 (uncharacterized protein LOC101221969 isoform X1 [Cucumis sativus] >XP_011658438.1 uncharacterized protein LOC101221969 isoform X1 [Cucumis sativus] >KGN65782.1 hypothetical protein Csa_023340 [Cucumis sativus]) HSP 1 Score: 315.8 bits (808), Expect = 2.1e-82 Identity = 149/162 (91.98%), Postives = 158/162 (97.53%), Query Frame = 0
BLAST of CmaCh01G006420 vs. NCBI nr
Match: XP_038895441.1 (uncharacterized protein LOC120083675 [Benincasa hispida] >XP_038895442.1 uncharacterized protein LOC120083675 [Benincasa hispida]) HSP 1 Score: 315.5 bits (807), Expect = 2.8e-82 Identity = 150/162 (92.59%), Postives = 159/162 (98.15%), Query Frame = 0
BLAST of CmaCh01G006420 vs. TAIR 10
Match: AT5G58920.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 254.6 bits (649), Expect = 5.5e-68 Identity = 112/162 (69.14%), Postives = 143/162 (88.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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